Sed0015518 (gene) Chayote v1

Overview


Name	Sed0015518
Type	gene
Organism	Sechium edule (Chayote v1)
Description	vacuolar protein sorting-associated protein 20 homolog 2-like
Location	LG14: 932839 .. 942328 (+)
RNA-Seq Expression	Sed0015518
Synteny	Sed0015518

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGATTTGTGCCATTTAAAAAAAAAAAGGAAAAAGAAACCCAGCCCTTCTTTACACGGCATCCGAGTCCGAGTTAGCCAGTTCTTGTTGGCTGTTGTTCCTAAAACCAAAATCCCCCATTTCTTTTCTCAATCTCCAGTTGGTTTCTCCGGTGATTCTTCATCCGTCAAAGGAATCAAACACGAAGAATGAGGGATTGACGGATCTGTTCTGTTCAATCCCTTTGCTCAATCAATCAATCGTATCCCACAAGTTAAAACCAAAATAGTGATCGGCGTTTCAATTGGGAGAATTGGATGGGGAATTTGTTCGTCAAGAAGCCCAAAGTCACCGATGTTGATAAAGCGATTCTCTCTCTCAAGACCCAGAGACGCAAACTTGGTCAATATCAACAGCAGGTTTTCAATTCATTTTTCGAAATCTCTTCTTCTTTTCGGTATCTGTCTTTGATTTCTGATTAATTTACAACTGGGGTTGGATTTTTGAAATTGGGTATCAAAGAAATAATCATGTTATGGCTGTTGGAGCCCAGTTTTACCATTATTAGGTGGATTCATATGGTAAATATATAGGATCCTTGTTGTGTAATTTGTTCTCTGCTGTGTATTCTAGTTCTGCAAGTACAATACTTCTCTGTGGAAATGATTGTTGATTAAGTAGCTCAATGTATTAGTGTCATACGCTACGTTCGGTGACATTAGTTAAGTTGCAGACAGTCACGAAAAGATGTGATTCACCTGTGACATTAAGTACCTCTAGTCTAGGAATGGGCGTGGTTAACCTAGTTTCTAAAAAATCTAATGAAGACATTTTTTTGTCTAATTATTGCCATTGGAAGTTCTACATAGATCTAAGATTTATATCTGATGATCTGTTTTTCTGTTCGTGAAGTTTTTAAGCTCAAAGTACTGGAGAAGTGTTATATGATTTCTGACCGTGTCAATTAGTTTAGAATCATTCATTGTTGTTCAATGCATGTATTTGTTGGCGTTAGTGCAGATGTTAGAGCTAGCTCTGACATCTGCACTTACTTTTGAGTTTTGAACTAGAGCCCTTTTGTGATTGTTTCATTCTAAGCTACGTGAACCTAATCAGACATGAAATGATTTAACTGTGAATTTTAGAGTGCTTGAAAGACCCTGAGGATCATCAGGGATAACTAATTTCAATATTTACTTGTTCTTGACTGTGCCATAATCCAACTCAATTTTTACTACAAAGAGATTAGTTTTATAGTAATGCGTGGGGTCGGATTAATTGAGAGATTCTACTAGGCTGACAAAAGGAACTGAACTATTTCTAACCATTTTTCTTACTCTTTTTAGAGATAGGACAATACTATTGTTTCAAAAAATCTAACCAAAGGTTAAGATCTATCATAGTCCATGTCTTTGGAATCCTAGTCTGTCCAAAGGCTTTTTCTGTTTAGTTCTTTTTGTGACAAGTTATGCACGGAAGAGTTAACATCTTGGATTCAATTTTGGGTAACATGTTTAGATTGGTGAGCCAGTGAGGATGCTTTGTTGTTGTATTGTTTGGTGAAGGGTGGTTGAGGATCTTGTTCATTTTCTTTAAAGATGTGATTTTTTTTGCACAGGCGGTTCAACTAGAGTCCTTGCTAGCATGTAAGGGTAAACTTGAAATCATACCTAATTGTCCATTTTTCATAGTTAATTTTTATTGGTTGAACAATATTCTGGTTTGTTCTATTTGATTATTACCTCGTGAAGCATTCTTGCTGCTCGAACCCTAGAGTTAATTTGTTTTTCATAGCTTACCACATAATTTCTAAAGCATTCTTGCATTCTTGCCATCCTCTTGCATTTGCCAACACTTCTAAAGCTTTGCAATCACGATCCTCTATTTGCCTCCCCTGCTCACCAACTGCCAACAACCCATTGTCCCTGCAACCCTCTTCTCTCTAACCCCAACAACTATGTTCCCCACCAGTTGCCCTCCAGTTAAGGCACCAAGAGCTTCTTTTTTTATCAACAAACCATTTGTGTCAAGTGCATGCGACAAATCTAATAACCGCACTAATTTTGGTAAGCTTCCCATGCCTATGTAAACTCCGAGGTTCTCTCTATGGTCGATAGCATATTGTACCAATAGTAGAACATGACGACGGTCTATGCAACTTGAGTTCCTTCTTGGTTGTTGTTCAGTGACCCATATCTCGTCTTCGATGAGCATAACTTGCTTGCTTCAACAACGAGGTGACCACCCTTTAACAACCTTTGTTGAAAAAAATACTCCAACCCCTTGTGCTAGATTTGGTTGGTGGCGATTCAACGGGCTCTAAAAGGTTTTTGAGTCGTGGTTGGCCTATACTCCATAGTTCCCTTGTCCTCAAGTTTTTTCAGCATCAATGGGGTTTTGAACGATTGTTAGCGGACCTGCAGCTACAAAACTATGCTCTTGCAACTCCCGTTTTGCAAGTGGCTGGTTGGTGACCCTCCGTTTCTTGTCGCGGGTTGTCATTTTTAGTGTTGTGATGTTTTTTTTATAAGAAACAAAATGTTCATTGATGAATGAATAAGGTACAAATCCTATCAAAACATTTATAACAAACTGTCACTGAGAGATAAGAGTGGTTAATTCATAGATACAAAAGGAGGGGGGCGGTATGACACCAATACAAAGCAGTGTATCAGACCGATTCAAAAAGGGATTTGAAATCCTTGAAGCGGTTGTGCCCTTGAACATTTTGCTATTGCTTTCACTCCAACATTTCCACAAAAATGCAGAAATGATGTTTATCTAGTGGACTTTTATTCCCTTTATTAAAGGATGACCCAACTACAAATATTTAAGCAGATCTAAGAAATCAGGAAAGGATGGGGAGAGCTATGGACCAGCCAAATTCTGATAAGATCAAAGCCCAAAATTTTGATGATAGGCTGCAAGTCATGAATAGGTGTTGTGATGTTTCATCCACAACACTCATAGCCGATTGTCTTTGATTCGAGCACTCAATCTGTTTCTGTGTTGGTTTCACGAGATTGCTGCAATTTAGTTGGCTATCTAGCAAGGTTTCAACTTCCATTGGAGTGGTTGGAAGTTCAATGTTATGCTAATATTGATGTTACCCACAGAAACTTCGCCGAACAATGCCCACCAAAATACCAGATTGGAGGTTGTCGGGTCATGAATGATACCCACAGAAATTGAAGGCCAGTCACCCGTTGGTGTGACTTAAAACCACGAACAATTCGATCATAATTTTAAATAATTTTCACATTCAAATATAAATCACCAAATTGAATTATGCATGACTTTAAATCATCCTGCAGAAAAGTTACATTTTACTCTGGGCATAAGATCGAAGACTTATAAATATCCTTTGAAGAGGTCAGATACTACCCAAAATAACTCATTTGTGGGTTTCTTTCTTTTTTGAATATCTTTGTGGGTTTCTTTCTTAGGAATGCATGTGTCCTTTACTTCGAAAATTGAATAATTAGTGTTTGTCTCTGCTTGACTTTTTTTCTCCTAGCTTGATGCGGTCATTGAAGCAGAAAAGAATGCTGCAAGAGAGTTAGTTCGTCAAAAGAGAAAGGATCGAGCCTTGCTAGCTTTGAAGAAGAAAAGGACACAAGAAGAATTATTAAAGCAAGTTGATGCCTGGCTGATAAATGTGGAACAACAAGTGAGTTCTGTTAATTTTTCCCTTGTTTATTCAATCTTATTTTTGCCTCCCTTTTAACTTCAAAATTGTACTATTTTGTTTCTATCGAAAGTAAAGGTTGCCTTAGCTCTTAAAATCAAGGTTTTTATGGTTGCTTCGAGACTCACCTGTGACACTACTCTTTTGATGTCTCTGGTGCCTGGCCTAGGGACGGGCGTGGTTACCTTGTTTCAAAAAAAAAAAAAAAGTTTTGATGGTTGTAATTGCTATGTTTGGGTGGTTTCTGGTTTCAACATTACTACTAAATTGTCTTCTTTTCTATTCGTGTTCATGTTCACGTTTAAAACTACTTTAGAAATTTGTGTTCATGCTTTAATATCGTGGTTGGTGCAGTTGTCAGATATTGAATTGGCCAGCAAACAGAGAGCTGTTTTTGAAAGCTTAAAGGCCGGTAATAATGCGATCAAAGCTATACAAAGTGAAATTAATATCGATGATGTCCAAAAGCTGATGGATGATACTGCTGAAGCCAAGGCATATCAAGATGTAAGTTTGTGAATTTTTCAATTCTTCGTTTATTTGGATTCATGTTCGAATATTTTATCTCTTACCTTGTTCAAAATTATATCTATATATATCGTACATATATATACATATTTATACATATACATGTATAGTACATATATTGTTAGTTGATATAATTAAATTTACCCCAACCCATCAACTTAAGCTTTTGGGTTGATTAGTGATTTAACATAATTCAATATGGTATCAGGGTAGGAGATCTTGAGTTCGAGTCCCTGCCAAGTCATTTCCTTCCCATTTAAAATTAATTCTACTTGTAGGGCATTTCACAAATTTCTCGAGAGAGTGTTAGTTGATATAATTAAATCTACCCCAACCCATCAACTTGAGCTTTTGTGTTGAATGGTGATTTAACATAATTCAACATATATATAGTATAAGATACAATTTCACTGGTATATGAAAATACAAGAGGGGGAGAGAATAGAGATACAAAAACACACTTGTCTATAAGGAAAGAGTTATGAAAAAGCCTCCAATTAGCAATGAGTGTAGAGAAACTGTAATGAGAAAATAAAGGAGATAGTTTACATGGTGATAGGGTCTTTCCTTATCTTGAAAACGTATTCTACTACGTTCCATCCAAAGATTTCAACAAAAAGATCTTATAAAATCTCCTAAAGAATATTTCATTTGAGGCTCCATTCAAACACGCTCAATGAGTTCTTTCAACTACCCCTTTGCTCCACCAACTTGACCATAACTCAATTCATTAAGACACTTCTACAATCAATTTGTTAGAGATTCAAATCTCCTCATCACAAATGTTGTTTTTTTTTTAATTTTAAACAAATAAAATGTTGTTTTTTTTAAAAAATAACAGTAGAATAAATTAAACAAAATTGGACTCTCTCCTAATAGAGATCCAAGACTTCATCGGGCAGATCCACTCTCGTTCTTCCTCCTCCAACTGCACCATCTGATCAAGCTTGTGAGCCACTCCGTTTGCCTCTCTATGTACCAAGAAAAGGAGAGTAGAACTCCAAATTAATTCCCAATTGAATAATGTCATTTACTATAAAGCCCACTTTCGTACAACACTCTTTCGTCTTCTTCAGAAGATTTACTATCCTTTGCTCGTCGGTCTCGATCTCGAACCTTCAAAAACCTAGTTCTATAGCAATTGTCATTCCTTCCCGAATGGCCATTGCTCCAATCGCTTCCAGATCTGTGAGCCAATTAACCGGGCGGATAAAAGAAAACATCGTTTGCCATTTGAATTTTGAACAATAGTTCTTACCACTCCGCTTCTCTCCAACCTTCACAACTGCATGTTTTGAACCGGAAAAAAGAAAAAACGATACCTTTGATCTCAATTAATCCTACTGGCTATTGGCTAGGCATGGTTGAAAAGCTTTGTAAAAAAAGAAATAGAGGGGGAACAACAATGGAGAGGGATGTAAGAAAAGAAAGAAGAAGTGGTCTAGCCTTATGATAGGTTTGGGTAGGGTATTAAGAAATAATATAAGGGTATGTTAGCAATTACTTGAGGTGTAAGTAGTGGCTTGTGGTTATAAATAGGAGAGGTTGTGTGAGGGAAAAAGGATCCAAATATTGAGTGAAATCTTGTGGGCTCAAAGAGTGTACTCCCATTCCCAAGAGAATACTCTCTTTGAGCCCACAAGATTTCACTCAATATTTGAATCCCTTTTCCCTCCTACAACCTCTCCTATTTATAACCACATGCCACTACTTACTCTCCAAGTAATTGTTAATATACCCCTATATTATTCCTTAATACCCTAAGACCCCAAACCTATCACCTTAACCACATGGATGAGGATAAAAAATTGTTTTGGGTTTGATTTAATCGGCCTAATTTCATAGACAATTTGTATTCTCTTGATGGACTGAGAAGCTTTTGATAGGATGTATTGAGAATAGTTCAGGTGCTGGCTGGGCTTTACACATTTTTTACAGCCTAGTCACGTGTCAGCATGTGATTTCATCACAAGTTTTTCTTTCTTAATCTATTATCGCCGTTTGAGGAACTCATCTCGTCATCTCATTTTTTTGAAACAATAGTACTTCAATCATTTCTCCTGTTCTTGTTAAGAAACTACATTCATAGAGAAATGAAAAAATATACAAGAATACCAAAAAATGAAAAGGTTTGGCTGTGGATGAGCATCAGTAGAGCCTTCTTTTGAGTTTTTGTAGAAAGAAAGCAATCTAAAAGTCTTTTGGGACACAAACCGATCTTTTGATGGTTTTTTCGACCTAGTCATTTATTATGTTATCTCTTGGTTGGTATAAGAGTTCTAGTTCATTTGCTTCTTACACATGCTTTTCTTTAACAAATTGGGTAAGCCTTTTTATGAACTTATACATCAGTGAATTTGAAAAAAATAAAGAATGTCCAACTGTTGGTTATTTCATGTTAATATCTCATATTTTATTTAACATTCCTTTCATGTTAATATCTCATATTTTATTTAATATTCCTTATTTTTAGAGATTCTCCTATTGGGATTCTTCTCTATTGAAAGAACCCCAACTCTCCATTGTAATCGTACCATCAATCTAATGAATATTATCTTTTTCCTAAAATCAAGTTGGTATCAGACCAGGAGGTTCTGTGTTCGAGTCCCTGCCAAGTCGTTTCCTCCCCAATTAAAATTAAATTCCACTTTAGGGTATTTCTCAAATTTCTAAGCCCAAAAGTAAGGGGGTGTGTTAGTTGATATAATTAAATTTACCCCAACCCATCAATATAACCTTTTGGGTTCATTGGTGATTTAACATAATTCAACACCAACAAACTCTCATTTGGTTTGAGTTTGACAGTTCCTTCTCATAAAAACCCTTTGAACTTCTAGTCATAATAGTGGAGTTTGGGGATGTAATAGAGTTGAAAGGTTGAGTTAGCTTAGCTTTTCATGAACTCAAAACATATCATTAGCACAAGAACTGATTTACTTTCTTCAAACTGTATTGGCGTGGAAGAGGTTTGATTTTGCTTTTGTTAATTCTTCCCTTGTGAAGATGACTTTGTGCATCAGTTGGCATGTGATGTTACAAATTTTGAAGTTGAGCATGATATAGGCTTGAACTTTATTTATATTTTTGTAGGAAATTAATGCAATCTTAGGAGAAAAATTATCTGAAGAAGATGAGGAGCAAATCTTAGCCGAATTTGAGAGCTTGGAAGCTCAGGTATTGTGTGTTTGGTTGTCTTATTCATTATTATTTTTCATTCTACATGATAGTTCATTCATTTTATTAGATTTCTGCTTACAGAATATCATATACTTCCGTAGGAGTGAGTACTAAAGTACCTTGACTAGTAAATTAATTTAATTGTGAATTTAGTTTTTTTACCCTTTTTATAAAGATTAAGTTAGGAATGAGGTTTTTGTGAGAATTCACCTACACCTACGGCTACACTTCACTTTGCTAGATTAATTATTTAGTCCTTATCATTAGAGAAATCTAGATTCATCTTCTGGCCACTTTACTAACTCAGATGACACACATGTTAGAAGCCAAGTGCTGGGTTTGCAAATTGGTTCTCATTCAATGTTTGTGAATTTTTCCTTCAAATTATTTTTCTCCTTGTCAAGTCGCTCATTAAATGTTTGTGATAGACCTAGCCTAATTAGGATTATATTTATGAGCATAAGGGAAGTTCAGAGAGCTCCCCTCTTCTAAGTCGCTCACAGAAAATACCAAATCAGACAATAGCCATTAAAAGATGAGCAAAACTCCCCTACACATGGATGTGTAGGGGGGACCCTGCATTTTGGAGATGTGGCACTTTAAGAGCCACAAAAAATTATTTTATAAGAAAACTATTTCATAAAGTATATAATTTTTGTGGCTCTTATAAAATGCCACATCCCCAAAATGTAGGGTCCCCCTACACATCCATGTGTAGGGGAGTTTTGCTCTTAAAAGATACCCTTCACAAGTAACAACATTTCCCGAAATACCCCAGTCTTGGCCTTCTAGCTAACCGACACTAGGGTTTAGGATTTAGGATTGCACCCTTACGCAATGGGGTCTATCAGCTTGATCAGTGTTTTAAAAAGCCCGAAAATGCGCACCTTAGGCTCAAAAAAGTCCCAGGCTCAATGTTGGCGCCTCGCCTGTCCTGGCACGCGCCTTTTCATAAAGCCCTCAGGTGCTCAAGTTGCACGTCTTAGGACTTTTTTATTTATTTAAAATCTAAATCAAGGTAATGTTTTACTCTTTTTTCTCTATTTGGTTTTACAATTTCAAATTCAATCAACAACTACTTCAAAGTTTTATTTTTAAAAAACCAATTAAAACCTAATCGTCAACCCTATGGGATGACTATGTAAAAAAATCTATATTGAAAGAGATTAATATATATGTTTTGTGTATGTATACATGTATGCGCCATTAGTAAAAAGTCCGCGCCTTTTGGTGCGCCTTGCGCCTCAGGCTCCAAAGAGCTAATGCGCCTTAGTGCGCCTTGAACTTTTTAAAACACCGAGCTTGATGAAAAAAATCATTTGTAAGGACTAAAATAGTTTATATTTCATAAAAAATATAGAAACTAAATCGAAAGATAAATAGACATATAGTTGCAAGTATATAGAAAAAAGGATATAAACTCCTAAGATTGGTGGTTGTGGCTACTGCCCATTACTATAATATCTTAAAGTAAATCACCGGTCGACACTTTTCTCAGCTCACCGTTCAAGATCTGCCTGAGGTCCCAACATCGGAAGAAAATACTGAAAAGTTGGATCTGCCCGACGTACCGACCAAAAAACCTGTTGCAGCTGATACCATTGAAGAAGATGCTGAGATTGTTTCATCTATTGCCCCCACAAAGAGAAGAGGTCTGTTTCTCTCCCTTTGTCTACTCTTCTCTTTTGTATTCATTGGTTTCATAATACATTAAATTTGTTGGAATGCAGTCATGGAAGAACCATTGCCAGCGTAAGTGTCGGTCTTGATCGAGACTGCTCAAAATATTTGATTACTGGTGAGACGTGATTTCAGCTGTGAATCTGTAATTTGATTTTGTGTATTCTTTTCTTACCAATGCTCATTTTGGCTTCATTCACCAATATGATGTTGTACTGACATTTCTTCCTCATGCCCATATGAATATATCTTCTCTCTGCTAGGGGGTGTTTTCTTAATGCCTATTTTGTTTTCTTCTTTTATGTTTTGGGATTCAGTTTCCAATTAAATTCTTGTATTATTTATAGCCGTTTTCTGCAAACTGCAAAGTAACTATTTTGGTTCTAATAATTTGATTCATTGGATGAAATTCAAGGTTGTGCAATTTTGAGATAATGAA

mRNA sequence

GTGATTTGTGCCATTTAAAAAAAAAAAGGAAAAAGAAACCCAGCCCTTCTTTACACGGCATCCGAGTCCGAGTTAGCCAGTTCTTGTTGGCTGTTGTTCCTAAAACCAAAATCCCCCATTTCTTTTCTCAATCTCCAGTTGGTTTCTCCGGTGATTCTTCATCCGTCAAAGGAATCAAACACGAAGAATGAGGGATTGACGGATCTGTTCTGTTCAATCCCTTTGCTCAATCAATCAATCGTATCCCACAAGTTAAAACCAAAATAGTGATCGGCGTTTCAATTGGGAGAATTGGATGGGGAATTTGTTCGTCAAGAAGCCCAAAGTCACCGATGTTGATAAAGCGATTCTCTCTCTCAAGACCCAGAGACGCAAACTTGGTCAATATCAACAGCAGCTTGATGCGGTCATTGAAGCAGAAAAGAATGCTGCAAGAGAGTTAGTTCGTCAAAAGAGAAAGGATCGAGCCTTGCTAGCTTTGAAGAAGAAAAGGACACAAGAAGAATTATTAAAGCAAGTTGATGCCTGGCTGATAAATGTGGAACAACAATTGTCAGATATTGAATTGGCCAGCAAACAGAGAGCTGTTTTTGAAAGCTTAAAGGCCGGTAATAATGCGATCAAAGCTATACAAAGTGAAATTAATATCGATGATGTCCAAAAGCTGATGGATGATACTGCTGAAGCCAAGGCATATCAAGATGAAATTAATGCAATCTTAGGAGAAAAATTATCTGAAGAAGATGAGGAGCAAATCTTAGCCGAATTTGAGAGCTTGGAAGCTCAGCTCACCGTTCAAGATCTGCCTGAGGTCCCAACATCGGAAGAAAATACTGAAAAGTTGGATCTGCCCGACGTACCGACCAAAAAACCTGTTGCAGCTGATACCATTGAAGAAGATGCTGAGATTGTTTCATCTATTGCCCCCACAAAGAGAAGAGTCATGGAAGAACCATTGCCAGCGTAAGTGTCGGTCTTGATCGAGACTGCTCAAAATATTTGATTACTGGTGAGACGTGATTTCAGCTGTGAATCTGTAATTTGATTTTGTGTATTCTTTTCTTACCAATGCTCATTTTGGCTTCATTCACCAATATGATGTTGTACTGACATTTCTTCCTCATGCCCATATGAATATATCTTCTCTCTGCTAGGGGGTGTTTTCTTAATGCCTATTTTGTTTTCTTCTTTTATGTTTTGGGATTCAGTTTCCAATTAAATTCTTGTATTATTTATAGCCGTTTTCTGCAAACTGCAAAGTAACTATTTTGGTTCTAATAATTTGATTCATTGGATGAAATTCAAGGTTGTGCAATTTTGAGATAATGAA

Coding sequence (CDS)

ATGGGGAATTTGTTCGTCAAGAAGCCCAAAGTCACCGATGTTGATAAAGCGATTCTCTCTCTCAAGACCCAGAGACGCAAACTTGGTCAATATCAACAGCAGCTTGATGCGGTCATTGAAGCAGAAAAGAATGCTGCAAGAGAGTTAGTTCGTCAAAAGAGAAAGGATCGAGCCTTGCTAGCTTTGAAGAAGAAAAGGACACAAGAAGAATTATTAAAGCAAGTTGATGCCTGGCTGATAAATGTGGAACAACAATTGTCAGATATTGAATTGGCCAGCAAACAGAGAGCTGTTTTTGAAAGCTTAAAGGCCGGTAATAATGCGATCAAAGCTATACAAAGTGAAATTAATATCGATGATGTCCAAAAGCTGATGGATGATACTGCTGAAGCCAAGGCATATCAAGATGAAATTAATGCAATCTTAGGAGAAAAATTATCTGAAGAAGATGAGGAGCAAATCTTAGCCGAATTTGAGAGCTTGGAAGCTCAGCTCACCGTTCAAGATCTGCCTGAGGTCCCAACATCGGAAGAAAATACTGAAAAGTTGGATCTGCCCGACGTACCGACCAAAAAACCTGTTGCAGCTGATACCATTGAAGAAGATGCTGAGATTGTTTCATCTATTGCCCCCACAAAGAGAAGAGTCATGGAAGAACCATTGCCAGCGTAA

Protein sequence

MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALLALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDDVQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSEENTEKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRRVMEEPLPA

Homology

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BLAST of Sed0015518 vs. NCBI nr
Match: XP_022149415.1 (vacuolar protein sorting-associated protein 20 homolog 2-like isoform X1 [Momordica charantia])

HSP 1 Score: 384.4 bits (986), Expect = 6.6e-103
Identity = 211/223 (94.62%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAA+ELVRQK+KDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAAKELVRQKKKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKK+ QEELLKQVDAWLINVEQQLSDIELASKQ+AVFESLKAGNNAIKAIQSEIN+DD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINLDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSEENT 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQ+TVQDLPEVPTS EN 
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQITVQDLPEVPTSNENV 180

Query: 181 EKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           EKLDLPDVPTKKPVAAD IEEDAEIVSS+APTKRRVMEEPL A
Sbjct: 181 EKLDLPDVPTKKPVAADPIEEDAEIVSSVAPTKRRVMEEPLAA 223

[Close]

BLAST of Sed0015518 vs. NCBI nr
Match: XP_038883019.1 (vacuolar protein sorting-associated protein 20 homolog 2-like [Benincasa hispida])

HSP 1 Score: 379.8 bits (974), Expect = 1.6e-101
Identity = 212/223 (95.07%), Postives = 216/223 (96.86%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQK+KDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKK+ QEELLKQVDAWLINVEQQLSDIELASKQ+AVFESLKAGNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSEENT 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQL VQDLPEVPTSEEN 
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLIVQDLPEVPTSEENA 180

Query: 181 EKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           EKL LPDVP+KKPVAAD IEEDAEIVSS APTKRRVMEEPL A
Sbjct: 181 EKLVLPDVPSKKPVAADAIEEDAEIVSSDAPTKRRVMEEPLAA 223

[Close]

BLAST of Sed0015518 vs. NCBI nr
Match: XP_022928588.1 (vacuolar protein sorting-associated protein 20 homolog 2-like [Cucurbita moschata])

HSP 1 Score: 378.6 bits (971), Expect = 3.6e-101
Identity = 210/223 (94.17%), Postives = 216/223 (96.86%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQK+KDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKK+ QEELLKQVDAWLINVEQQLSDIELASKQ+AVFESLKAGNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSEENT 180
           VQKLMDDTAEAKAYQDE+NAILGEKLSEEDEEQILAEFE LEAQLTV+DLPEVPTSEEN 
Sbjct: 121 VQKLMDDTAEAKAYQDEMNAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180

Query: 181 EKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           EKLDLP+VPTKKPVAAD IEEDA IVSS A TKRRVMEEPLPA
Sbjct: 181 EKLDLPNVPTKKPVAADAIEEDAVIVSSDASTKRRVMEEPLPA 223

[Close]

BLAST of Sed0015518 vs. NCBI nr
Match: KAG6603293.1 (Vacuolar protein sorting-associated protein 20-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378.3 bits (970), Expect = 4.7e-101
Identity = 210/223 (94.17%), Postives = 215/223 (96.41%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQK+KDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKK+ QEELLKQVDAWLINVEQQLSDIELASKQ+AVFESLK GNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKTGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSEENT 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFE LEAQLTV+DLPEVPTSEEN 
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180

Query: 181 EKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           EKLDLP+VPTKKPVAAD IEEDA IVSS A TKRRVMEEPLPA
Sbjct: 181 EKLDLPNVPTKKPVAADAIEEDAVIVSSDASTKRRVMEEPLPA 223

[Close]

BLAST of Sed0015518 vs. NCBI nr
Match: XP_023520722.1 (vacuolar protein sorting-associated protein 20 homolog 2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 376.7 bits (966), Expect = 1.4e-100
Identity = 212/224 (94.64%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQK+KDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKK+ QEELLKQVDAWLINVEQQLSDIELASKQ+AVFESLKAGNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSEENT 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTV+DLPEVPTSEEN 
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVEDLPEVPTSEENA 180

Query: 181 EKLDLPDVPTKKPVAA-DTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           EKLDLP+VPTKKPVAA D IEEDA IVSS A TKRRVMEEPLPA
Sbjct: 181 EKLDLPNVPTKKPVAADDAIEEDAVIVSSDASTKRRVMEEPLPA 224

[Close]

BLAST of Sed0015518 vs. ExPASy Swiss-Prot
Match: Q9FY89 (Vacuolar protein sorting-associated protein 20 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS20.2 PE=1 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.7e-83
Identity = 172/226 (76.11%), Postives = 197/226 (87.17%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKPK+T+VD+AILSLKTQRRKLGQYQQQL+ VIEAEK AAR+L+R+KRKDRALL
Sbjct: 1   MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKKRTQEELLKQVD WLINVEQQL+DIEL SKQ+AVFESLK GNNAIKAIQSE+N+DD
Sbjct: 61  ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAIQSEVNLDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSE--- 180
           VQKLMDDTAEAKAYQDE++AILGEKLS EDEE+ILAEF++LE+ L V+D+PEVPT+E   
Sbjct: 121 VQKLMDDTAEAKAYQDELSAILGEKLSAEDEEEILAEFDNLESLLIVEDMPEVPTTELMP 180

Query: 181 ENTEKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           E  EK+DLPDVPTK PVA+          +    TKR+V+EEPL A
Sbjct: 181 EEPEKMDLPDVPTKAPVAS----------NETTSTKRKVLEEPLEA 216

[Close]

BLAST of Sed0015518 vs. ExPASy Swiss-Prot
Match: Q8GXN6 (Vacuolar protein sorting-associated protein 20 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS20.1 PE=1 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 3.5e-83
Identity = 170/224 (75.89%), Postives = 201/224 (89.73%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKP++T+VD+AILSLKTQRRKLGQYQQ+L+ VIEAEK AAR+L+R+KRKDRALL
Sbjct: 1   MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           AL+KKRTQEELLKQVD W+INVEQQL+DIEL SKQ+AVFESLK GN+AIKAIQSE+++DD
Sbjct: 61  ALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSE-EN 180
           VQKLMDDTA+AKAYQDE+NAILGEKLS EDEE ILAEF++LE+QL V ++PEVPT E E 
Sbjct: 121 VQKLMDDTADAKAYQDELNAILGEKLSAEDEEDILAEFDNLESQLIVDEMPEVPTKESEE 180

Query: 181 TEKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           +EKLDLPDVPTK PVA+     +AEI  + + TK +V+EEPLPA
Sbjct: 181 SEKLDLPDVPTKTPVAS-----NAEITPAESATKTKVLEEPLPA 219

[Close]

BLAST of Sed0015518 vs. ExPASy Swiss-Prot
Match: Q503V0 (Charged multivesicular body protein 6 OS=Danio rerio OX=7955 GN=chmp6 PE=2 SV=3)

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-31
Identity = 82/196 (41.84%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 1   MGNLFVKK--PKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRA 60
           MGNLF KK   +VT+ D+A+L LK QR KL QYQ+++   ++ E+  A++L++  +KD+A
Sbjct: 1   MGNLFGKKKATRVTEQDRAVLQLKQQRDKLKQYQKRITLQMDKERQLAKQLLKDGKKDKA 60

Query: 61  LLALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINI 120
           LL LKKKR Q++LL++ +  + N+E+ + DIE A  +  V E LK GN+ +K +   ++I
Sbjct: 61  LLLLKKKRYQDQLLEKTENQISNLERMVQDIEFAQIEMKVIEGLKVGNDCLKKMHEVLSI 120

Query: 121 DDVQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSEE 180
           ++V+K+MD+T +A  YQ +I+ +L   L++EDEE +LAE E++       +LPEVP  E 
Sbjct: 121 EEVEKIMDETHDAIEYQKQIDEMLAGSLTQEDEEAVLAELEAITQGEADLELPEVPGEE- 180

Query: 181 NTEKLDLPDVPTKKPV 195
                 LP+VP ++PV
Sbjct: 181 ------LPEVPEQEPV 189

[Close]

BLAST of Sed0015518 vs. ExPASy Swiss-Prot
Match: Q5ZL55 (Charged multivesicular body protein 6 OS=Gallus gallus OX=9031 GN=CHMP6 PE=2 SV=3)

HSP 1 Score: 127.5 bits (319), Expect = 1.9e-28
Identity = 79/199 (39.70%), Postives = 127/199 (63.82%), Query Frame = 0


Query: 1   MGNLFVKK--PKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRA 60
           MGNLF +K   +VT+ DKA+L LK QR KL QYQ+++   +E E+  AR+L+++ +K++A
Sbjct: 1   MGNLFGRKRRSRVTEQDKAVLQLKQQRDKLRQYQKRISLGLERERELARQLLKEGKKEKA 60

Query: 61  LLALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINI 120
           +L LKKKR QE+LL + D  + N+E+ + DIE    +  V E LK GN  +  +   ++I
Sbjct: 61  MLLLKKKRYQEQLLDKTDNQISNLERMVQDIEFTQIEMKVIEGLKIGNECLNKMHQVMSI 120

Query: 121 DDVQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESL-EAQLTVQDLPEVPTSE 180
           ++V++++ +T +A  YQ +I+ IL   L+EEDE+ IL E  ++ + QL + D+P  P  E
Sbjct: 121 EEVERIIGETQDAVEYQRQIDEILAGSLTEEDEDAILEELNAITQEQLELPDVPSEPLPE 180

Query: 181 ENTEKLDLPDVPTKKPVAA 197
           E  E   + + P  + VAA
Sbjct: 181 EPPEATPVKNRPKPELVAA 199

[Close]

BLAST of Sed0015518 vs. ExPASy Swiss-Prot
Match: Q6GMA4 (Charged multivesicular body protein 6-A OS=Xenopus laevis OX=8355 GN=chmp6-a PE=2 SV=3)

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-27
Identity = 77/199 (38.69%), Postives = 125/199 (62.81%), Query Frame = 0


Query: 1   MGNLFVKK--PKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRA 60
           MGNLF +K   +VT+ DKA+L LK QR KL QYQ+++   ++ E+  A++L+   +K++A
Sbjct: 1   MGNLFARKRRSRVTEQDKAVLQLKQQRDKLKQYQKKITLQLQRERELAKQLLHDGKKEKA 60

Query: 61  LLALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINI 120
            L LKKKR QE+LL++ D  + N+E+ + DIE A  +  V E LK GN  +K +   ++I
Sbjct: 61  KLLLKKKRYQEQLLEKTDNQISNLEKMVEDIEFAQIEMKVIEGLKVGNECLKKMHEVMSI 120

Query: 121 DDVQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESL-EAQLTVQDLPEVPTSE 180
           ++V+++MD+T E   YQ +I+ +L   L+ EDEE IL E E++ +  L + + P  P  +
Sbjct: 121 EEVERIMDETQEGIEYQRQIDEMLSGSLTAEDEEAILEELEAITQEDLELPEAPSEPLPD 180

Query: 181 ENTEKLDLPDVPTKKPVAA 197
              EK  + + P  + +AA
Sbjct: 181 TIPEKQAVKNKPKPQMIAA 199

[Close]

BLAST of Sed0015518 vs. ExPASy TrEMBL
Match: A0A6J1D5M8 (vacuolar protein sorting-associated protein 20 homolog 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017847 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.2e-103
Identity = 211/223 (94.62%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAA+ELVRQK+KDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAAKELVRQKKKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKK+ QEELLKQVDAWLINVEQQLSDIELASKQ+AVFESLKAGNNAIKAIQSEIN+DD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINLDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSEENT 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQ+TVQDLPEVPTS EN 
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQITVQDLPEVPTSNENV 180

Query: 181 EKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           EKLDLPDVPTKKPVAAD IEEDAEIVSS+APTKRRVMEEPL A
Sbjct: 181 EKLDLPDVPTKKPVAADPIEEDAEIVSSVAPTKRRVMEEPLAA 223

[Close]

BLAST of Sed0015518 vs. ExPASy TrEMBL
Match: A0A6J1EPH4 (vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucurbita moschata OX=3662 GN=LOC111435445 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 210/223 (94.17%), Postives = 216/223 (96.86%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQK+KDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKK+ QEELLKQVDAWLINVEQQLSDIELASKQ+AVFESLKAGNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSEENT 180
           VQKLMDDTAEAKAYQDE+NAILGEKLSEEDEEQILAEFE LEAQLTV+DLPEVPTSEEN 
Sbjct: 121 VQKLMDDTAEAKAYQDEMNAILGEKLSEEDEEQILAEFEGLEAQLTVEDLPEVPTSEENA 180

Query: 181 EKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           EKLDLP+VPTKKPVAAD IEEDA IVSS A TKRRVMEEPLPA
Sbjct: 181 EKLDLPNVPTKKPVAADAIEEDAVIVSSDASTKRRVMEEPLPA 223

[Close]

BLAST of Sed0015518 vs. ExPASy TrEMBL
Match: A0A1S3B5R7 (vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucumis melo OX=3656 GN=LOC103486109 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.8e-99
Identity = 207/223 (92.83%), Postives = 213/223 (95.52%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQK+KDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKK+ QEELLK VDAWLINVEQQLSDIELASKQ+AVFESLKAGNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKHVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSEENT 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTV+DLPEVPTSEE  
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVEDLPEVPTSEEKE 180

Query: 181 EKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           EKLDLP+VP+KKPVAAD IEEDAE VSS A TKRRVME PL A
Sbjct: 181 EKLDLPEVPSKKPVAADAIEEDAETVSSDASTKRRVMEGPLAA 223

[Close]

BLAST of Sed0015518 vs. ExPASy TrEMBL
Match: A0A6J1HVP8 (vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucurbita maxima OX=3661 GN=LOC111467276 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.1e-98
Identity = 205/223 (91.93%), Postives = 213/223 (95.52%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQK+KDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKK+ QEELLKQVDAWLINVEQQLSDIELASKQ+ VFESLKAGNNAIKAIQSEINIDD
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKDVFESLKAGNNAIKAIQSEINIDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSEENT 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEF  LEAQLT++DLPEVPTS+EN 
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFGGLEAQLTIEDLPEVPTSDENA 180

Query: 181 EKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           EKLDLP+VPTKKPV    +EEDAEIVSS APTKRRVMEEPLPA
Sbjct: 181 EKLDLPNVPTKKPV---VVEEDAEIVSSDAPTKRRVMEEPLPA 220

[Close]

BLAST of Sed0015518 vs. ExPASy TrEMBL
Match: A0A6J1EBQ2 (vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucurbita moschata OX=3662 GN=LOC111432566 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 4.0e-98
Identity = 206/224 (91.96%), Postives = 214/224 (95.54%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQK+KDRALL
Sbjct: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKK+ QEELLKQVDAWLINVEQQLSDIELASKQ+AVFESLKAGNNAIKAIQSEINI+D
Sbjct: 61  ALKKKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIED 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSEENT 180
           VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTV+DLPE+PTS+EN 
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVEDLPEIPTSKENG 180

Query: 181 EKLDLPDVPTKKPVA-ADTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           E LDLPDVPTKKPVA A  +EEDAEIV S APTKRR MEEPL A
Sbjct: 181 EGLDLPDVPTKKPVASAAAVEEDAEIVPSDAPTKRRAMEEPLAA 224

[Close]

BLAST of Sed0015518 vs. TAIR 10
Match: AT5G09260.1 (vacuolar protein sorting-associated protein 20.2 )

HSP 1 Score: 309.7 bits (792), Expect = 1.9e-84
Identity = 172/226 (76.11%), Postives = 197/226 (87.17%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKPK+T+VD+AILSLKTQRRKLGQYQQQL+ VIEAEK AAR+L+R+KRKDRALL
Sbjct: 1   MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           ALKKKRTQEELLKQVD WLINVEQQL+DIEL SKQ+AVFESLK GNNAIKAIQSE+N+DD
Sbjct: 61  ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAIQSEVNLDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSE--- 180
           VQKLMDDTAEAKAYQDE++AILGEKLS EDEE+ILAEF++LE+ L V+D+PEVPT+E   
Sbjct: 121 VQKLMDDTAEAKAYQDELSAILGEKLSAEDEEEILAEFDNLESLLIVEDMPEVPTTELMP 180

Query: 181 ENTEKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           E  EK+DLPDVPTK PVA+          +    TKR+V+EEPL A
Sbjct: 181 EEPEKMDLPDVPTKAPVAS----------NETTSTKRKVLEEPLEA 216

[Close]

BLAST of Sed0015518 vs. TAIR 10
Match: AT5G63880.1 (SNF7 family protein )

HSP 1 Score: 309.3 bits (791), Expect = 2.5e-84
Identity = 170/224 (75.89%), Postives = 201/224 (89.73%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKP++T+VD+AILSLKTQRRKLGQYQQ+L+ VIEAEK AAR+L+R+KRKDRALL
Sbjct: 1   MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           AL+KKRTQEELLKQVD W+INVEQQL+DIEL SKQ+AVFESLK GN+AIKAIQSE+++DD
Sbjct: 61  ALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKLSEEDEEQILAEFESLEAQLTVQDLPEVPTSE-EN 180
           VQKLMDDTA+AKAYQDE+NAILGEKLS EDEE ILAEF++LE+QL V ++PEVPT E E 
Sbjct: 121 VQKLMDDTADAKAYQDELNAILGEKLSAEDEEDILAEFDNLESQLIVDEMPEVPTKESEE 180

Query: 181 TEKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRRVMEEPLPA 224
           +EKLDLPDVPTK PVA+     +AEI  + + TK +V+EEPLPA
Sbjct: 181 SEKLDLPDVPTKTPVAS-----NAEITPAESATKTKVLEEPLPA 219

[Close]

BLAST of Sed0015518 vs. TAIR 10
Match: AT5G63880.2 (SNF7 family protein )

HSP 1 Score: 295.8 bits (756), Expect = 2.9e-80
Identity = 170/248 (68.55%), Postives = 201/248 (81.05%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           MGNLFVKKP++T+VD+AILSLKTQRRKLGQYQQ+L+ VIEAEK AAR+L+R+KRKDRALL
Sbjct: 1   MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
           AL+KKRTQEELLKQVD W+INVEQQL+DIEL SKQ+AVFESLK GN+AIKAIQSE+++DD
Sbjct: 61  ALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDD 120

Query: 121 VQKLMDDTAEAKAYQD------------------------EINAILGEKLSEEDEEQILA 180
           VQKLMDDTA+AKAYQD                        E+NAILGEKLS EDEE ILA
Sbjct: 121 VQKLMDDTADAKAYQDCENLYNLFCRAFVFDDSIYISECQELNAILGEKLSAEDEEDILA 180

Query: 181 EFESLEAQLTVQDLPEVPTSE-ENTEKLDLPDVPTKKPVAADTIEEDAEIVSSIAPTKRR 224
           EF++LE+QL V ++PEVPT E E +EKLDLPDVPTK PVA+     +AEI  + + TK +
Sbjct: 181 EFDNLESQLIVDEMPEVPTKESEESEKLDLPDVPTKTPVAS-----NAEITPAESATKTK 240

[Close]

BLAST of Sed0015518 vs. TAIR 10
Match: AT2G19830.1 (SNF7 family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08
Identity = 60/212 (28.30%), Postives = 98/212 (46.23%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           M  LF K  + T   + +  L      L + +  L      E   A+E  R K K  A+ 
Sbjct: 3   MNRLFGKPKQETSTLQTLDKLNETLEMLEKKENVLLKKATGEVEKAKEFSRAKNKRAAIQ 62

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
            LK+KR  E+ ++Q+  + + +  Q+  +E A       ++L+ G +A+KA+Q   NIDD
Sbjct: 63  CLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDD 122

Query: 121 VQKLMDD----TAEAKAYQDEINAILGEKLSEEDEEQILAEFESLE-AQLTVQDLPEVPT 180
           V K MD+    T   K  Q+ ++A  G   ++ DE+++ AE + LE A+L  Q L  VP 
Sbjct: 123 VDKTMDEINEQTENMKQIQEALSAPFG--ANDFDEDELEAELDELEGAELEEQLLQPVPI 182

Query: 181 SEENTEKLDLPDVPTKKPVAADTIEEDAEIVS 208
                 K      P + P       E+ E+ +
Sbjct: 183 HVPQGNK------PARAPAQKQPTAEEDELAA 206

[Close]

BLAST of Sed0015518 vs. TAIR 10
Match: AT4G29160.1 (SNF7 family protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-07
Identity = 57/216 (26.39%), Postives = 99/216 (45.83%), Query Frame = 0


Query: 1   MGNLFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKRKDRALL 60
           M  LF K  +  +  + +  L      L + ++ L     AE   A+E  R K K  A+ 
Sbjct: 2   MNRLFGKPKQEANALQTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKNKRAAIQ 61

Query: 61  ALKKKRTQEELLKQVDAWLINVEQQLSDIELASKQRAVFESLKAGNNAIKAIQSEINIDD 120
            LK+KR  E  ++Q+  + + +  Q+  +E A       ++L++G +A+KA+Q   NIDD
Sbjct: 62  CLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDD 121

Query: 121 VQKLMDDTAEAKAYQDEINAILGEKL---SEEDEEQILAEFESLEAQLTVQDLPEVPTSE 180
           V K MD+  E      +I   L   +   ++ DE+++ AE + LE++     L +  T+ 
Sbjct: 122 VDKTMDEINEQTENMKQIQEALATPMGAAADFDEDELAAELDELESEELESQLLQPATTA 181

Query: 181 ENTEKLDLPDVPT------KKPVAADTIEEDAEIVS 208
                  LP VP        +PV      E+ E+ +
Sbjct: 182 P-----PLPSVPVPAGRQPARPVPQKRTAEEEELAA 212

The following BLAST results are available for this feature:

BLAST of Sed0015518 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149415.1	6.6e-103	94.62	vacuolar protein sorting-associated protein 20 homolog 2-like isoform X1 [Momord...	[more]
XP_038883019.1	1.6e-101	95.07	vacuolar protein sorting-associated protein 20 homolog 2-like [Benincasa hispida...	[more]
XP_022928588.1	3.6e-101	94.17	vacuolar protein sorting-associated protein 20 homolog 2-like [Cucurbita moschat...	[more]
KAG6603293.1	4.7e-101	94.17	Vacuolar protein sorting-associated protein 20-like 2, partial [Cucurbita argyro...	[more]
XP_023520722.1	1.4e-100	94.64	vacuolar protein sorting-associated protein 20 homolog 2-like isoform X2 [Cucurb...	[more]

BLAST of Sed0015518 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FY89	2.7e-83	76.11	Vacuolar protein sorting-associated protein 20 homolog 2 OS=Arabidopsis thaliana...	[more]
Q8GXN6	3.5e-83	75.89	Vacuolar protein sorting-associated protein 20 homolog 1 OS=Arabidopsis thaliana...	[more]
Q503V0	1.4e-31	41.84	Charged multivesicular body protein 6 OS=Danio rerio OX=7955 GN=chmp6 PE=2 SV=3	[more]
Q5ZL55	1.9e-28	39.70	Charged multivesicular body protein 6 OS=Gallus gallus OX=9031 GN=CHMP6 PE=2 SV=...	[more]
Q6GMA4	1.2e-27	38.69	Charged multivesicular body protein 6-A OS=Xenopus laevis OX=8355 GN=chmp6-a PE=...	[more]

BLAST of Sed0015518 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5M8	3.2e-103	94.62	vacuolar protein sorting-associated protein 20 homolog 2-like isoform X1 OS=Momo...	[more]
A0A6J1EPH4	1.8e-101	94.17	vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucurbita mosch...	[more]
A0A1S3B5R7	4.8e-99	92.83	vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucumis melo OX...	[more]
A0A6J1HVP8	3.1e-98	91.93	vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucurbita maxim...	[more]
A0A6J1EBQ2	4.0e-98	91.96	vacuolar protein sorting-associated protein 20 homolog 2-like OS=Cucurbita mosch...	[more]

BLAST of Sed0015518 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09260.1	1.9e-84	76.11	vacuolar protein sorting-associated protein 20.2	[more]
AT5G63880.1	2.5e-84	75.89	SNF7 family protein	[more]
AT5G63880.2	2.9e-80	68.55	SNF7 family protein	[more]
AT2G19830.1	1.3e-08	28.30	SNF7 family protein	[more]
AT4G29160.1	2.5e-07	26.39	SNF7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 21..41
None	No IPR available	GENE3D	1.10.287.1060		coord: 14..90 e-value: 1.6E-9 score: 39.7
None	No IPR available	GENE3D	6.10.250.1710		coord: 116..168 e-value: 3.3E-5 score: 25.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..194
None	No IPR available	PANTHER	PTHR22761:SF50	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20 HOMOLOG 1	coord: 2..223
None	No IPR available	PANTHER	PTHR22761	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 2..223
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 16..192 e-value: 1.5E-41 score: 141.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015518.1	Sed0015518.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway
biological_process	GO:0006900	vesicle budding from membrane
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0000815	ESCRT III complex
cellular_component	GO:0005771	multivesicular body