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Sed0015469 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTGTACCGAAAAACTAATTTCACCGACGGCTCCATTTAAATTCGAGAAAAAGGGTAAAAACCCTTTTTATTCTCTCAGATTCTCAGAAATCACAGTTTTCCGGTGATGGAGAAAGTAATTCCAAATTCCTCGAAGCGATAAAGCTACAGAGATCGACAAAAAACCTCCTCTCATCGGAGCTTCCAGCTTCCGAATCGGCGGCGGAGATCGGAGAAGAAGAAGAAGAAGAAGAATCGGAAAAAAAGAAATGAGCAGCGATGCGAAGCGAAGCATTCAAGGGAATCTAATGGCGAAATCCGATGAGGAAGATCGGAAACCTCCGGCTGCGGCGGCGGCGGCGGCGGCGACTACTACTGGAAAGAAGATTGTGATCAAGAGTGCCGACATGTTCGGCGATGTGCAGAAGGAGGCTGTTGATGTCGCCATAGCTGTTCGCTCTCTCTATTTTCTCTCTTATCGTTTTCGGATTTCATTTTTCAACTGCTGTTCTTTGATATGTTCTTGGAGTTTTGATTGTAGGTTATTATTTTCCTATTTTAGATTATCTATATATATTTATTTTTGAAACCTGGATTATCTAGATTTGATTTTGGTTTAGTTAGGTTTCTAGGTAAAATATAAGTTTATTCGCCATGGTTTGATTTGAAGAAAACTAAAGCTTAGTATTGTTTTAAAAAACGTTTAGTTTTATGATTCAAAAAAATTAAGAATTTAGGCTTCATTTGATAAAAAGGTTTTTTGTTTTTTGTTTATGAAATTTAAGCCTACGACAACTATCTTGCCGTATTTTTTTTTTATTTGGATATTTACCTCTTATCTATACTTTAATAAACAAAACCAAAATTTGGAAACAAACAAAAATAGCTTCCAAATGTTTGTTTTTGTTTTTGAAATTTGGTTAGTATTCACTACTTTCTTAAGGAAATATAGATATATAGTAGAAAATTTGAGTAGAATTAAGATTAAATTTCATAAACCAAAAACAAAAAATCAAATGGTTATGCCTTAGTTATTCTAGTTTTAAAAATTAGAATTTAGTCAATGTGATTTCATAATAATAGTTCTTATCGTACTTAATTATTAAATATATGGAAATTTACTATTCACACATAAATGGTATGATTTTTTTTTATATCGGCCATTTAATTCACAATTTCATCATTTCCAAGTACTTAATTTGTTAATGATTAAAAATAACAAAGATTATTTTTAGGTTTTATCAAACTACAAGGGCTACATTCTAGTTTTTTTAAAATTATAGGGACTAAATTCTATATCTTTTTAATTCATAGGGACTAAAACTCTAGTTTTTAAAACTACGAAGACTAAAATCTAACTTTTTTTCAAAGTATAAGGACTAAACTTATATGTTACCCTATTAGGTATAATAAATTCAGTTTGGAATAAAAGTTGAACCAATTATTCAACCATTTATCGATTTAATATACGATTCTCGTTTTTTACTCTGGATTTTGGTGTTAGGCATTTGAAAAGCATAGTGTTGAGAAGGATGCAGCAGAGTGGATTAAGAAAGAGTTTGATAAGAGGCATGGACCGACTTGGCATTGCATTGTTGGCCGTAGTTTTGGTAACTGATCTTTCTATTTTGTTAAGTTTTCAGCTGAAATTGTTGTGGTTTTGCTGCTTGATAATCTGATATCTGGTTTCGTGTTCACTGTTGGGGGGCTGTTTGTTTGACATATTTAGGTAGGATTTAGTTTTAGGATTTATTAACTCCTCCTCAAAAATCTACATCCAAACAAGTTCTTATTAACTTCTCCTCATTTTTACTTTTAAAAATAACTCTCATTTCTAATCATTCATTTTTAACTTCTCAATCATTTCTAACCATTCATTTTTAATCATTCCTTTCAAATCAATCAAAATAGCTCATTTTTAATCATTTCTTTTTTAACTACTCATTTTAAATCTACATCCAAACAAGGTTTTGACTCTAACTCCTTTACACAAAAACTACATCCAAACGAGTTTTTGGCTAAAACTCTCAATTTTTAACTACTCAATATAACTTATCAACATAACTCCGTAAGCTAAACTTACCTATTATGTCAAACAAACACCCCCTTTAAGTCGATTCTTATGCTAGGTTGGATTAATGTTTCTGTCAAAGTTGTCCCTAAGGGGTGGCGGAGTGGTTGAAAACTTGAGCTTTGAAGGTATGCTTCCCTCAAGGTCTCGAGTTTGAGTCTTTCCTGTGACAGTACTCCTTCGATATCTCCGGTGTCTGACCTAGGGACTGGTGTGGTTACCCTTGTTTAAAAAAAAAAAAGTTTCTGTCAAAGTTTTCATTTTCGTTTTCGGTTTTGAGTTGGCAACCTATCAATGTAGGTCAGGTAAACTAAGGGCCCCTTTCTGTCACATGGAGTGAGAGAGAATCTAGACTGCCCACCATAATTTAGTTAAGTTTGTGCAGCACATTTCTCTTCCCACTTCAATAATTTTGTCAAGGTCTGAAAATTCTTACAAATTGCTTTCAATTCTTGCCAACCAAAAGATATTCAAATAAGACAGATCAGACATTCCAAATCATTCAACAAGAACAAAAAAAGAGAGGATTTCTTCATATTTCTAGAAACTTCCCAAGCGGTCAGTGTTTCGATGAGAATGTTATCAACATGTATGGCTAGTTGACTAGCACTACCCTCAGACCGTTAGTAGAAACCAAACTGGCAAAGTAACTAGAATTACTTTTCTTCATTCCCAAGTTTCAAAACTTCTAAGGCCTCGTTTGATAACCATTTTGTTTTTATTTTTTGGTTTTTGAAATTTAAGCCTACAACGTCCTCAAAGGGTGGCGCAGTGGTAGAAGACTTGTGCTTTGAGGGTATGCTCTCCTAAAGGTCCCAAGTTCGAGACTCACCTGTGACATTAATCCTTCGATGTCTCTGGTGTCTGGCCTAGGGACGGGCGTGGTTACTCATGTTTCAAAAAAGAAATTTAAGCCTACAACAACTACATTACCATAGGTTTTTTCTTATTTGAATATCTATATCTACATCTTACCTATATTTTAAGAAACCATACCAAAATTTGAGAAGAAAAAAGAAAGTAGCTTTCAAAAATTTGTGTTTTGTTTTTGAAATTTGGTTAGCATTCACCTATTTTCTCAAAGAAAGATGGATAATATTATAGGAGAGAGGGAGTGCATTGTAGGAAACTTGAAAAAAAAAAAATTAAATTTCAAAAATCAAAGGATTATCAATCAGGGTCTAAATATTTCAAATCTTGCTCTTGCATTTTATTTGACCCATTTAAGGATCTGAGAAACTTGTCAAAGTAAAGGACAAAGGAGAAATGGTGACGTTTTTCTTAGAGGAAAAGAGATTCTAAAACATTCCATAGATTTCCCCATTCTCTCTAATCTGCCGTGTTTTCATTTTTAGAATTCCTCATTGAAAAGATGTGGATATGATTCAAATTTTTAAAAAATAGAAATAAAAACAATGCACGAACTACTTTTCGTATTGTCGATTATTTTGGAGATGGAAACTCATATGTATCTATTATGGTTTCGGAATTCATTAAACTCAAACGATATTTGGTTAAAACAAAGATTCAGTATAAGAATCATCTTGAGAAGTCTATGTAGAAAATTTGAATTTCATATTGAATAGATGGAGATTTCATGTTTATCTATTTGGCTGCTTCATTTAAATTTCTTAATCTTTGTGAAGAAATTTATTATTAACAATCAAGCTGATGCAAATGACTGATTATGAGTTATCGTTGTTGAAGTCCCAACTTGAAAATTTATAGGAAATTAATTTTTAAGTAAGTATGGATTGAACCCATTACCTATTTAAAGACAATCTTTATAAAAAGACATTTGTAACATTAATTTGGTGCACAGGTAATAATAGTGGCATTAAAATGAGTCGATCATTTGATAGGGGCCGTTAAAATTTATTTAGCCATCAATAGTGATTCCTTAGGATTTAGTATCTTACAAATTTCTTGACAACTGCATGATGTTACTACATTTGGTTCCATAGTCGTTATAACTTCTATTGTTTCCATGACAGGTTCGTACGTAACACACGAGACGAACCACTTCGTTTACTTCTACGTGGATCAGAAAGCAGTTTTACTATTCAAATCTGGTTGATAAACATGTATATATTATGCTAAAAATCGTTCCCAAGGGATGGCATAATAATTGAAGATTTGGGCTTTGAAGACATGCTCCTTTCAAGGCCCTAGGTTTGAGACCCACTTGTAACATTACTCTTTTAATGTCTCCCAGTGCCTGACTTAGGGACGGGCGTGTTTACCCTTATTAAAAAAAAAAAAAAAAAATTGGTTACTGAAAATCATTTAAATGATGATATCCTTGTGGACAAGACAAGTGCCTTCTCTTCTGCAACCTCGTCTTTTTTATTCCTTATCTAATGATTTTGCTTTAGCCACTTTAGCCTTTAAAGTAAAAACATAATCAGCTTGTTTGCCTA GCTGTACCGAAAAACTAATTTCACCGACGGCTCCATTTAAATTCGAGAAAAAGGGTAAAAACCCTTTTTATTCTCTCAGATTCTCAGAAATCACAGTTTTCCGGTGATGGAGAAAGTAATTCCAAATTCCTCGAAGCGATAAAGCTACAGAGATCGACAAAAAACCTCCTCTCATCGGAGCTTCCAGCTTCCGAATCGGCGGCGGAGATCGGAGAAGAAGAAGAAGAAGAAGAATCGGAAAAAAAGAAATGAGCAGCGATGCGAAGCGAAGCATTCAAGGGAATCTAATGGCGAAATCCGATGAGGAAGATCGGAAACCTCCGGCTGCGGCGGCGGCGGCGGCGGCGACTACTACTGGAAAGAAGATTGTGATCAAGAGTGCCGACATGTTCGGCGATGTGCAGAAGGAGGCTGTTGATGTCGCCATAGCTGCATTTGAAAAGCATAGTGTTGAGAAGGATGCAGCAGAGTGGATTAAGAAAGAGTTTGATAAGAGGCATGGACCGACTTGGCATTGCATTGTTGGCCGTAGTTTTGGTTCGTACGTAACACACGAGACGAACCACTTCGTTTACTTCTACGTGGATCAGAAAGCAGTTTTACTATTCAAATCTGGTTGATAAACATGTATATATTATGCTAAAAATCGTTCCCAAGGGATGGCATAATAATTGAAGATTTGGGCTTTGAAGACATGCTCCTTTCAAGGCCCTAGGTTTGAGACCCACTTGTAACATTACTCTTTTAATGTCTCCCAGTGCCTGACTTAGGGACGGGCGTGTTTACCCTTATTAAAAAAAAAAAAAAAAAATTGGTTACTGAAAATCATTTAAATGATGATATCCTTGTGGACAAGACAAGTGCCTTCTCTTCTGCAACCTCGTCTTTTTTATTCCTTATCTAATGATTTTGCTTTAGCCACTTTAGCCTTTAAAGTAAAAACATAATCAGCTTGTTTGCCTA ATGAGCAGCGATGCGAAGCGAAGCATTCAAGGGAATCTAATGGCGAAATCCGATGAGGAAGATCGGAAACCTCCGGCTGCGGCGGCGGCGGCGGCGGCGACTACTACTGGAAAGAAGATTGTGATCAAGAGTGCCGACATGTTCGGCGATGTGCAGAAGGAGGCTGTTGATGTCGCCATAGCTGCATTTGAAAAGCATAGTGTTGAGAAGGATGCAGCAGAGTGGATTAAGAAAGAGTTTGATAAGAGGCATGGACCGACTTGGCATTGCATTGTTGGCCGTAGTTTTGGTTCGTACGTAACACACGAGACGAACCACTTCGTTTACTTCTACGTGGATCAGAAAGCAGTTTTACTATTCAAATCTGGTTGA MSSDAKRSIQGNLMAKSDEEDRKPPAAAAAAAATTTGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDAAEWIKKEFDKRHGPTWHCIVGRSFGSYVTHETNHFVYFYVDQKAVLLFKSG Homology
BLAST of Sed0015469 vs. NCBI nr
Match: XP_008458417.1 (PREDICTED: dynein light chain 1, cytoplasmic [Cucumis melo]) HSP 1 Score: 208.0 bits (528), Expect = 4.7e-50 Identity = 106/123 (86.18%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Sed0015469 vs. NCBI nr
Match: XP_038906782.1 (dynein light chain 1, cytoplasmic-like [Benincasa hispida]) HSP 1 Score: 207.6 bits (527), Expect = 6.1e-50 Identity = 106/123 (86.18%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of Sed0015469 vs. NCBI nr
Match: XP_022959519.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata] >XP_023547610.1 dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo] >KAG6575076.1 Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 207.2 bits (526), Expect = 8.0e-50 Identity = 106/123 (86.18%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of Sed0015469 vs. NCBI nr
Match: XP_023006429.1 (dynein light chain 1, cytoplasmic [Cucurbita maxima]) HSP 1 Score: 205.3 bits (521), Expect = 3.0e-49 Identity = 105/123 (85.37%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Sed0015469 vs. NCBI nr
Match: XP_004150499.1 (dynein light chain 1, cytoplasmic [Cucumis sativus] >KGN47430.1 hypothetical protein Csa_021736 [Cucumis sativus]) HSP 1 Score: 204.9 bits (520), Expect = 4.0e-49 Identity = 104/123 (84.55%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Sed0015469 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 3.6e-29 Identity = 57/86 (66.28%), Postives = 73/86 (84.88%), Query Frame = 0
BLAST of Sed0015469 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 3.6e-29 Identity = 58/86 (67.44%), Postives = 73/86 (84.88%), Query Frame = 0
BLAST of Sed0015469 vs. ExPASy Swiss-Prot
Match: Q96FJ2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 3.6e-29 Identity = 58/86 (67.44%), Postives = 73/86 (84.88%), Query Frame = 0
BLAST of Sed0015469 vs. ExPASy Swiss-Prot
Match: Q9D0M5 (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 3.6e-29 Identity = 58/86 (67.44%), Postives = 73/86 (84.88%), Query Frame = 0
BLAST of Sed0015469 vs. ExPASy Swiss-Prot
Match: Q78P75 (Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 3.6e-29 Identity = 58/86 (67.44%), Postives = 73/86 (84.88%), Query Frame = 0
BLAST of Sed0015469 vs. ExPASy TrEMBL
Match: A0A1S3C7T8 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103497840 PE=3 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.3e-50 Identity = 106/123 (86.18%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Sed0015469 vs. ExPASy TrEMBL
Match: A0A6J1H8A5 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111460475 PE=3 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 3.9e-50 Identity = 106/123 (86.18%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of Sed0015469 vs. ExPASy TrEMBL
Match: A0A6J1L253 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111499159 PE=3 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49 Identity = 105/123 (85.37%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Sed0015469 vs. ExPASy TrEMBL
Match: A0A0A0KCI4 (Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_6G319760 PE=3 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.9e-49 Identity = 104/123 (84.55%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Sed0015469 vs. ExPASy TrEMBL
Match: A0A6J1EQC6 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111436746 PE=3 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 7.3e-49 Identity = 104/123 (84.55%), Postives = 109/123 (88.62%), Query Frame = 0
BLAST of Sed0015469 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 154.1 bits (388), Expect = 7.5e-38 Identity = 78/118 (66.10%), Postives = 96/118 (81.36%), Query Frame = 0
BLAST of Sed0015469 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 75.5 bits (184), Expect = 3.4e-14 Identity = 50/105 (47.62%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of Sed0015469 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 73.9 bits (180), Expect = 9.8e-14 Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 0
BLAST of Sed0015469 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10 Identity = 34/85 (40.00%), Postives = 51/85 (60.00%), Query Frame = 0
BLAST of Sed0015469 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 ) HSP 1 Score: 60.8 bits (146), Expect = 8.6e-10 Identity = 32/85 (37.65%), Postives = 49/85 (57.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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