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Sed0015430 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAACAATAAAATTGAGCTTAGTTCAAATTTATTATTATTAGTATTATTTTGAGTTCAACATTTAAATTTAAAGAGATTTGAACAGATGAAGAAAAAGTAATATCGTGTATCACAATCCTTTGATTACCCGTATTTTTTAATTAAAAAATAAAATAAAATTACATATTCTTGAATTAAAAAAAAACGGTAAATTTTAATTTTTCACTATTAACAACGACGACGTATTTGCGTCATATGAACGCTCGTTTGGGCTTGACAAAACACGGAAAGGATAGGGTAAAACTTCACCCAAACACAGGGACTAAAACCCTAACCCCAGAAAAAGCAGACTCTGTGCCGTCGTCTTTCACATTCGCATTCGTTTCCCGGCCGTCGTCGTTGGAGAAAGGGCCGCCGGAGAGCTCGTCAACAATGTCGAAGCGAGGTACGGTTTGATCGTTCTATGAACTGTAAATGCAATTGTTGATTCGACCATTGTTTTGATACTGTTTTTTCAATTTAGATTTGAGATTTCTTGTCGTCGTCGTCGTTGTTGTTGTGTATCGATTTAGGTAGGGGAGGTTCCGCCGGGAACAAATTCAGGATGTCGCTAGGTCTTCCGGTGGCGGCCACAGTGAACTGTGCCGACAACACAGGAGCGAAGAATCTGTACATCATTTCAGTGAAGGGGATCAAGGGCCGTCTCAACCGTTTGCCGTCGGCTTGCGTTGGCGATATGGTTATGGCGACGGTCAAGAAGGGAAAACCTGACCTTAGGAAGAAGGTGCTGCCCGCTGTTATTGTCCGGCAGCGCAAGCCGTGGCGCCGAAAGGATGGTGTCTTTATGTACTTCGAAGGTGGTCTTCGATCACTTTAGTCTCAGTTTGATAGTCATTTCGTTTTTTGAAATTTAAGCTTATTTTTTATTCAAATTTTCTACTAAGAGTTCCACGTATACTATAATGTTTCCATATTTCCATATATGAATGTTATTCAAATTTCGCAGAAACAAAATTACTCTTTTTGTTTCTAAATTTTGATTTGATTTATATAATTATAGGTAAGATGTAGATATTCGAGTAAGAAAAAACACATGGTAGGATAGTTGTTGTAGATGTCAATTTCAAAAAACCAAATACTAAAAATAAATTGATTATCAAACAGATCCTTTTTTTTTTTCTCATTGTTATTAGGTTTGTTTGTCTAGGGTTTTTGTTTTAGTTAATGTTGATCGGTTGGTTTTCGTTATTGGATGTGGTATTGTTGGTTTGGTTTTTGCTGATTAGAGTGATCCTATTTTAATTTGATGAAGGAGACTTGGGGTTTTGTGTATGCTTTTGGCTTCTAATGTTCTGTGGATGAAATATTAAGTCATAATCAAAGAAAAAAGATCAAGTCCATTAGACGTCCTTTAGGGGCGGCATAGAGTCGGGTGCCTGAGCCTTAAAGGGTGTGCTCTCCTTGGAGTCTAGGCTTCAGGCGGTTGTAGGGATTAATTTGTAAGGCGATCTCAAATTTTGCCTCCTTTTTCTATGTTGTCTCCCGGTGCCTAGCCCAGGGACGGACATGGACACCCCTAGGTATAAGGGGGAGCAAAGTGACAATTTTTCGGTTTTAATTATAAAAAATAGTAATATCACTATTAGACCGCACACTTAACATCGAACCCAACTACAATAATGGAGGCATTCCCATTGAGTTAAAGTATAAGGCGCCAAAAATACTCCCGTTAACACTGAACTTTCTCATTTTGCAGATAATGCCGGTGTCATTGTGAACCCCAAAGGAGAGATGAAAGGTAACGACCTTGTCTTCCATATTCGGTATAAATTATATGTATCATGTATCTTCTACTCTTCTAAATTCCTTCAACAATGGAAGTAGAGTAATCAGAACGACGATGACCGAATAATTTACTTCTATCAATGTCTTATATCCTGGGTATTGCACTAGAAATATTAAAGAGATTGAACCTGAGACAAAGAAGATTGATACATGAGTAGCTAGAATTGTAGATTTGGAGTACTAATGGGTTGCCATCCTGTCTATATTTTAAAATTGTTTTGGCATCTACACCGTCATTTATTTTGCTTTCATAGACTTGAATAGTTGCTCTCTTGTGTCTTGCAGGTTCTGCTATAACAGGCCCTATTGGAAAGGAATGTGCTGATCTCTGGCCAAGAATTGCAAGTGCAGCTAATGCTATTGTTTGAATTGAAATTAAGTGACTTGATTTTTTTTTATCTTTCCATAGATCATCAGGGTTTAAAGATTCAATTACATTGCCTGGGATTTACTTATTTTATCTTGGGAAACAATTATTGTCATGAGTTTTGGTTGATATTCAACATGCTTAGTTATTATCA GAACAATAAAATTGAGCTTAGTTCAAATTTATTATTATTAGTATTATTTTGAGTTCAACATTTAAATTTAAAGAGATTTGAACAGATGAAGAAAAAGTAATATCGTGTATCACAATCCTTTGATTACCCGTATTTTTTAATTAAAAAATAAAATAAAATTACATATTCTTGAATTAAAAAAAAACGGTAAATTTTAATTTTTCACTATTAACAACGACGACGTATTTGCGTCATATGAACGCTCGTTTGGGCTTGACAAAACACGGAAAGGATAGGGTAAAACTTCACCCAAACACAGGGACTAAAACCCTAACCCCAGAAAAAGCAGACTCTGTGCCGTCGTCTTTCACATTCGCATTCGTTTCCCGGCCGTCGTCGTTGGAGAAAGGGCCGCCGGAGAGCTCGTCAACAATGTCGAAGCGAGGTAGGGGAGGTTCCGCCGGGAACAAATTCAGGATGTCGCTAGGTCTTCCGGTGGCGGCCACAGTGAACTGTGCCGACAACACAGGAGCGAAGAATCTGTACATCATTTCAGTGAAGGGGATCAAGGGCCGTCTCAACCGTTTGCCGTCGGCTTGCGTTGGCGATATGGTTATGGCGACGGTCAAGAAGGGAAAACCTGACCTTAGGAAGAAGGTGCTGCCCGCTGTTATTGTCCGGCAGCGCAAGCCGTGGCGCCGAAAGGATGGTGTCTTTATGTACTTCGAAGATAATGCCGGTGTCATTGTGAACCCCAAAGGAGAGATGAAAGGTTCTGCTATAACAGGCCCTATTGGAAAGGAATGTGCTGATCTCTGGCCAAGAATTGCAAGTGCAGCTAATGCTATTGTTTGAATTGAAATTAAGTGACTTGATTTTTTTTTATCTTTCCATAGATCATCAGGGTTTAAAGATTCAATTACATTGCCTGGGATTTACTTATTTTATCTTGGGAAACAATTATTGTCATGAGTTTTGGTTGATATTCAACATGCTTAGTTATTATCA ATGAACGCTCGTTTGGGCTTGACAAAACACGGAAAGGATAGGGTAAAACTTCACCCAAACACAGGGACTAAAACCCTAACCCCAGAAAAAGCAGACTCTGTGCCGTCGTCTTTCACATTCGCATTCGTTTCCCGGCCGTCGTCGTTGGAGAAAGGGCCGCCGGAGAGCTCGTCAACAATGTCGAAGCGAGGTAGGGGAGGTTCCGCCGGGAACAAATTCAGGATGTCGCTAGGTCTTCCGGTGGCGGCCACAGTGAACTGTGCCGACAACACAGGAGCGAAGAATCTGTACATCATTTCAGTGAAGGGGATCAAGGGCCGTCTCAACCGTTTGCCGTCGGCTTGCGTTGGCGATATGGTTATGGCGACGGTCAAGAAGGGAAAACCTGACCTTAGGAAGAAGGTGCTGCCCGCTGTTATTGTCCGGCAGCGCAAGCCGTGGCGCCGAAAGGATGGTGTCTTTATGTACTTCGAAGATAATGCCGGTGTCATTGTGAACCCCAAAGGAGAGATGAAAGGTTCTGCTATAACAGGCCCTATTGGAAAGGAATGTGCTGATCTCTGGCCAAGAATTGCAAGTGCAGCTAATGCTATTGTTTGA MNARLGLTKHGKDRVKLHPNTGTKTLTPEKADSVPSSFTFAFVSRPSSLEKGPPESSSTMSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV Homology
BLAST of Sed0015430 vs. NCBI nr
Match: GER24956.1 (SET-domain containing protein lysinemethyltransferase family protein [Striga asiatica]) HSP 1 Score: 285.8 bits (730), Expect = 2.9e-73 Identity = 155/199 (77.89%), Postives = 164/199 (82.41%), Query Frame = 0
BLAST of Sed0015430 vs. NCBI nr
Match: KAB8090118.1 (hypothetical protein EE612_015202, partial [Oryza sativa] >BAS82209.1 Os03g0139100, partial [Oryza sativa Japonica Group]) HSP 1 Score: 285.0 bits (728), Expect = 4.9e-73 Identity = 140/146 (95.89%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Sed0015430 vs. NCBI nr
Match: KAF4364815.1 (hypothetical protein G4B88_025534 [Cannabis sativa]) HSP 1 Score: 284.6 bits (727), Expect = 6.4e-73 Identity = 141/145 (97.24%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of Sed0015430 vs. NCBI nr
Match: KAF4371318.1 (hypothetical protein G4B88_003788 [Cannabis sativa]) HSP 1 Score: 284.6 bits (727), Expect = 6.4e-73 Identity = 141/145 (97.24%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of Sed0015430 vs. NCBI nr
Match: KAF4351629.1 (hypothetical protein F8388_003282 [Cannabis sativa]) HSP 1 Score: 284.6 bits (727), Expect = 6.4e-73 Identity = 146/168 (86.90%), Postives = 149/168 (88.69%), Query Frame = 0
BLAST of Sed0015430 vs. ExPASy Swiss-Prot
Match: P49690 (60S ribosomal protein L23 OS=Arabidopsis thaliana OX=3702 GN=RPL23A PE=2 SV=3) HSP 1 Score: 280.8 bits (717), Expect = 1.2e-74 Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Sed0015430 vs. ExPASy Swiss-Prot
Match: Q07760 (60S ribosomal protein L23 OS=Nicotiana tabacum OX=4097 GN=RPL23 PE=2 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 6.0e-74 Identity = 136/140 (97.14%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Sed0015430 vs. ExPASy Swiss-Prot
Match: Q9XEK8 (60S ribosomal protein L23 OS=Syntrichia ruralis OX=38588 GN=RPL23 PE=2 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 6.4e-68 Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = 0
BLAST of Sed0015430 vs. ExPASy Swiss-Prot
Match: Q6PC14 (60S ribosomal protein L23 OS=Danio rerio OX=7955 GN=rpl23 PE=2 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 2.8e-63 Identity = 119/139 (85.61%), Postives = 129/139 (92.81%), Query Frame = 0
BLAST of Sed0015430 vs. ExPASy Swiss-Prot
Match: Q3T057 (60S ribosomal protein L23 OS=Bos taurus OX=9913 GN=RPL23 PE=2 SV=2) HSP 1 Score: 241.9 bits (616), Expect = 6.2e-63 Identity = 118/139 (84.89%), Postives = 129/139 (92.81%), Query Frame = 0
BLAST of Sed0015430 vs. ExPASy TrEMBL
Match: A0A5A7NWS4 (SET-domain containing protein lysinemethyltransferase family protein OS=Striga asiatica OX=4170 GN=STAS_00513 PE=3 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 1.4e-73 Identity = 155/199 (77.89%), Postives = 164/199 (82.41%), Query Frame = 0
BLAST of Sed0015430 vs. ExPASy TrEMBL
Match: A0A0N7KGJ7 (Os03g0139100 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0139100 PE=3 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 2.4e-73 Identity = 140/146 (95.89%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Sed0015430 vs. ExPASy TrEMBL
Match: A0A453Q1D2 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 3.1e-73 Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of Sed0015430 vs. ExPASy TrEMBL
Match: A0A7J6FL04 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_003788 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 3.1e-73 Identity = 141/145 (97.24%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of Sed0015430 vs. ExPASy TrEMBL
Match: A0A7J6F2D6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_025534 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 3.1e-73 Identity = 141/145 (97.24%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of Sed0015430 vs. TAIR 10
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein ) HSP 1 Score: 280.8 bits (717), Expect = 8.5e-76 Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Sed0015430 vs. TAIR 10
Match: AT2G33370.1 (Ribosomal protein L14p/L23e family protein ) HSP 1 Score: 280.8 bits (717), Expect = 8.5e-76 Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Sed0015430 vs. TAIR 10
Match: AT3G04400.1 (Ribosomal protein L14p/L23e family protein ) HSP 1 Score: 280.8 bits (717), Expect = 8.5e-76 Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Sed0015430 vs. TAIR 10
Match: AT3G04400.2 (Ribosomal protein L14p/L23e family protein ) HSP 1 Score: 255.0 bits (650), Expect = 5.0e-68 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of Sed0015430 vs. TAIR 10
Match: ATCG00780.1 (ribosomal protein L14 ) HSP 1 Score: 68.2 bits (165), Expect = 8.7e-12 Identity = 40/119 (33.61%), Postives = 69/119 (57.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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