Sed0015386 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTGCTCAAAAAGCCAAACCCAACAAAACAAATTATGCAACGTGGGCATTGTGTCAGCGCCAACAGGGGTAAACACACAAGTCCCTCCTCATCTCGCCCCTAAGCTGTTCGACGAAATTCCTCTCTATAAATTCTTCTCTTCCATTGCCCCATTTCACTTGTGAACTGAGTGACTCACTGAGTCTGTTTGCTTGGTTCTGCTAGACCTCCATGGCTCAGTTCAAGCACCTTGTCATTGCCAAGTTTAAGGAGGGTGTGCTTGTGGATGAGATTGTGGACCAAGTGGAGAAGGTGGTTGCTCATATTGACTCTGTCAAGTCCTTTGAATGGTACCACTTCCTTCCCTTTTCAATCCTCTTAAGGACAACCCTCCTTACCTTCTACATCTGGCCACAAATTTTCCTAAACCCAAAAATAAAATGAAAACTTTGAAAAAGAAAGTAAATAAAATTTGGCCATAGATGTGCCATGCAGAGGGTAAGGAAGGTTGAATCCTTAAAGCTAAGTACCTAAGTATTACTCTTTGCACAATATCTATCTTTGTTGTAATATATCCTGTGGTTCATGCTTAACTATAATCATTTGCATACTTATTGAACTCTTAGCTATGCATCAAAATTGAGAAATCTGCCAAATATGCTTACAAAGAGTTGATACTTGATTGGTTAGAATATTTGTGAATGGTGATGATTTTTTTTAGAGGTATACTACTGCTGCATGCTGAAAACACCTTCTTTAGAAGCAGAAATAGTATGTTAATCTTTGGAACTTGAACTGGGTTATGCAAATATGTACACTTGCGCTTGGGTTGGACAGGGGACATGATGTGGAAGGCCAAGACATGCTGACACAAGGCTTCACCCACGTCTTCTCAATGACATTTGATGACAAAGAAGCCATTGCTTCATTTCTTACCCATCCTAAGCATCTTGAGTTCTGTCCCACCTTCACTGCAGCCATTGATAAGATTATAGTCCTTGATTTCCCATCTCTTCTTCTCAAGCCACCTGCACCATCACAATCCCCGCCTCCGCCACCTCCCGTTGCAGAACCAGCACCGGAAGCTGCTCCCCCTCCGGTGTTGACATCGACACCTCTGCCACCACCAGTACCAGCACCCGCAACTGCTCCGACACCAGCATCTGCATCCGCATGAGCTAGGAAGCTAATAGGGCAGTGTGGCGTTGTCCTAAGTTAAAAATATTGTACTCTCTTATGTTTTATTTGCAGTATGTAGTGTACTCTTCTGTTTGCTTTTGAGAGTCATGGAAAGTGAAGTCTTTTTCTTAATGGGAAGAAAGTGGTCCATGCATTTGCTTGCTTTATTAGTCTAATATGCACTTTGCTTTGCCTATGTTTCTTTTGTTTCCTTGATTGGTAATTGCTACCTAGGAGGATGAGATTATCCATTTTACTAAGTTTGTCTGCCATTTTGTTATCGTAAAC GATTGCTCAAAAAGCCAAACCCAACAAAACAAATTATGCAACGTGGGCATTGTGTCAGCGCCAACAGGGGTAAACACACAAGTCCCTCCTCATCTCGCCCCTAAGCTGTTCGACGAAATTCCTCTCTATAAATTCTTCTCTTCCATTGCCCCATTTCACTTGTGAACTGAGTGACTCACTGAGTCTGTTTGCTTGGTTCTGCTAGACCTCCATGGCTCAGTTCAAGCACCTTGTCATTGCCAAGTTTAAGGAGGGTGTGCTTGTGGATGAGATTGTGGACCAAGTGGAGAAGGTGGTTGCTCATATTGACTCTGTCAAGTCCTTTGAATGGGGACATGATGTGGAAGGCCAAGACATGCTGACACAAGGCTTCACCCACGTCTTCTCAATGACATTTGATGACAAAGAAGCCATTGCTTCATTTCTTACCCATCCTAAGCATCTTGAGTTCTGTCCCACCTTCACTGCAGCCATTGATAAGATTATAGTCCTTGATTTCCCATCTCTTCTTCTCAAGCCACCTGCACCATCACAATCCCCGCCTCCGCCACCTCCCGTTGCAGAACCAGCACCGGAAGCTGCTCCCCCTCCGGTGTTGACATCGACACCTCTGCCACCACCAGTACCAGCACCCGCAACTGCTCCGACACCAGCATCTGCATCCGCATGAGCTAGGAAGCTAATAGGGCAGTGTGGCGTTGTCCTAAGTTAAAAATATTGTACTCTCTTATGTTTTATTTGCAGTATGTAGTGTACTCTTCTGTTTGCTTTTGAGAGTCATGGAAAGTGAAGTCTTTTTCTTAATGGGAAGAAAGTGGTCCATGCATTTGCTTGCTTTATTAGTCTAATATGCACTTTGCTTTGCCTATGTTTCTTTTGTTTCCTTGATTGGTAATTGCTACCTAGGAGGATGAGATTATCCATTTTACTAAGTTTGTCTGCCATTTTGTTATCGTAAAC ATGGCTCAGTTCAAGCACCTTGTCATTGCCAAGTTTAAGGAGGGTGTGCTTGTGGATGAGATTGTGGACCAAGTGGAGAAGGTGGTTGCTCATATTGACTCTGTCAAGTCCTTTGAATGGGGACATGATGTGGAAGGCCAAGACATGCTGACACAAGGCTTCACCCACGTCTTCTCAATGACATTTGATGACAAAGAAGCCATTGCTTCATTTCTTACCCATCCTAAGCATCTTGAGTTCTGTCCCACCTTCACTGCAGCCATTGATAAGATTATAGTCCTTGATTTCCCATCTCTTCTTCTCAAGCCACCTGCACCATCACAATCCCCGCCTCCGCCACCTCCCGTTGCAGAACCAGCACCGGAAGCTGCTCCCCCTCCGGTGTTGACATCGACACCTCTGCCACCACCAGTACCAGCACCCGCAACTGCTCCGACACCAGCATCTGCATCCGCATGA MAQFKHLVIAKFKEGVLVDEIVDQVEKVVAHIDSVKSFEWGHDVEGQDMLTQGFTHVFSMTFDDKEAIASFLTHPKHLEFCPTFTAAIDKIIVLDFPSLLLKPPAPSQSPPPPPPVAEPAPEAAPPPVLTSTPLPPPVPAPATAPTPASASA Homology
BLAST of Sed0015386 vs. NCBI nr
Match: XP_038893880.1 (stress-response A/B barrel domain-containing protein At5g22580-like [Benincasa hispida] >XP_038893881.1 stress-response A/B barrel domain-containing protein At5g22580-like [Benincasa hispida]) HSP 1 Score: 225.3 bits (573), Expect = 3.5e-55 Identity = 126/154 (81.82%), Postives = 135/154 (87.66%), Query Frame = 0
BLAST of Sed0015386 vs. NCBI nr
Match: XP_022142413.1 (stress-response A/B barrel domain-containing protein At5g22580-like [Momordica charantia]) HSP 1 Score: 221.1 bits (562), Expect = 6.6e-54 Identity = 121/154 (78.57%), Postives = 131/154 (85.06%), Query Frame = 0
BLAST of Sed0015386 vs. NCBI nr
Match: KAA0040939.1 (stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa] >TYK20318.1 stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-51 Identity = 121/152 (79.61%), Postives = 132/152 (86.84%), Query Frame = 0
BLAST of Sed0015386 vs. NCBI nr
Match: XP_008461858.1 (PREDICTED: stress-response A/B barrel domain-containing protein At5g22580-like [Cucumis melo]) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-51 Identity = 121/152 (79.61%), Postives = 132/152 (86.84%), Query Frame = 0
BLAST of Sed0015386 vs. NCBI nr
Match: XP_004139472.2 (stress-response A/B barrel domain-containing protein At5g22580 [Cucumis sativus] >KAE8652800.1 hypothetical protein Csa_022697 [Cucumis sativus]) HSP 1 Score: 208.4 bits (529), Expect = 4.4e-50 Identity = 123/170 (72.35%), Postives = 132/170 (77.65%), Query Frame = 0
BLAST of Sed0015386 vs. ExPASy Swiss-Prot
Match: Q9FK81 (Stress-response A/B barrel domain-containing protein At5g22580 OS=Arabidopsis thaliana OX=3702 GN=At5g22580 PE=1 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.2e-28 Identity = 58/99 (58.59%), Postives = 73/99 (73.74%), Query Frame = 0
BLAST of Sed0015386 vs. ExPASy Swiss-Prot
Match: Q9LUV2 (Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana OX=3702 GN=HS1 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.5e-16 Identity = 38/95 (40.00%), Postives = 65/95 (68.42%), Query Frame = 0
BLAST of Sed0015386 vs. ExPASy Swiss-Prot
Match: I6WU39 (Olivetolic acid cyclase OS=Cannabis sativa OX=3483 GN=OAC PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.7e-07 Identity = 28/95 (29.47%), Postives = 51/95 (53.68%), Query Frame = 0
BLAST of Sed0015386 vs. ExPASy TrEMBL
Match: A0A6J1CN73 (stress-response A/B barrel domain-containing protein At5g22580-like OS=Momordica charantia OX=3673 GN=LOC111012552 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 3.2e-54 Identity = 121/154 (78.57%), Postives = 131/154 (85.06%), Query Frame = 0
BLAST of Sed0015386 vs. ExPASy TrEMBL
Match: A0A5A7TI03 (Stress-response A/B barrel domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold708G00480 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.6e-52 Identity = 121/152 (79.61%), Postives = 132/152 (86.84%), Query Frame = 0
BLAST of Sed0015386 vs. ExPASy TrEMBL
Match: A0A1S3CFK4 (stress-response A/B barrel domain-containing protein At5g22580-like OS=Cucumis melo OX=3656 GN=LOC103500356 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.6e-52 Identity = 121/152 (79.61%), Postives = 132/152 (86.84%), Query Frame = 0
BLAST of Sed0015386 vs. ExPASy TrEMBL
Match: A0A0A0LY53 (Stress-response A/B barrel domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G151000 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 4.3e-51 Identity = 120/152 (78.95%), Postives = 130/152 (85.53%), Query Frame = 0
BLAST of Sed0015386 vs. ExPASy TrEMBL
Match: A0A6J1FGY0 (stress-response A/B barrel domain-containing protein At5g22580-like OS=Cucurbita moschata OX=3662 GN=LOC111443900 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 3.6e-50 Identity = 119/155 (76.77%), Postives = 130/155 (83.87%), Query Frame = 0
BLAST of Sed0015386 vs. TAIR 10
Match: AT5G22580.1 (Stress responsive A/B Barrel Domain ) HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29 Identity = 58/99 (58.59%), Postives = 73/99 (73.74%), Query Frame = 0
BLAST of Sed0015386 vs. TAIR 10
Match: AT3G17210.1 (heat stable protein 1 ) HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17 Identity = 38/95 (40.00%), Postives = 65/95 (68.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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