Sed0015362 (gene) Chayote v1

Overview


Name	Sed0015362
Type	gene
Organism	Sechium edule (Chayote v1)
Description	mini zinc finger
Location	LG12: 30555567 .. 30555857 (+)
RNA-Seq Expression	Sed0015362
Synteny	Sed0015362

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAAGGCTGGTGGTGGTGAAGAAATCCGATGGCTCGGGCAGTAGAAACCGCTCGGGTAATTCGGGTTCGTCGGTCGTTCGCTACGCCGAGTGCCAGAAGAACCACGCCGCGAAGCTCGGTGGGTTTGCGGTGGACGGGTGCCGGGAATTCATGGCTAGAGGTGAGGATGGGACTGAGGAGGCTCTCAATTGTGCTGCTTGTGGCTGTCATAGGAACTTTCATAGAAGGGAGGTTGATAATGCTGAAGTTGTTTTTGAGTATTCTCCTCCAAATTCCAATTATTGA

mRNA sequence

ATGAAGAAAAGGCTGGTGGTGGTGAAGAAATCCGATGGCTCGGGCAGTAGAAACCGCTCGGGTAATTCGGGTTCGTCGGTCGTTCGCTACGCCGAGTGCCAGAAGAACCACGCCGCGAAGCTCGGTGGGTTTGCGGTGGACGGGTGCCGGGAATTCATGGCTAGAGGTGAGGATGGGACTGAGGAGGCTCTCAATTGTGCTGCTTGTGGCTGTCATAGGAACTTTCATAGAAGGGAGGTTGATAATGCTGAAGTTGTTTTTGAGTATTCTCCTCCAAATTCCAATTATTGA

Coding sequence (CDS)

ATGAAGAAAAGGCTGGTGGTGGTGAAGAAATCCGATGGCTCGGGCAGTAGAAACCGCTCGGGTAATTCGGGTTCGTCGGTCGTTCGCTACGCCGAGTGCCAGAAGAACCACGCCGCGAAGCTCGGTGGGTTTGCGGTGGACGGGTGCCGGGAATTCATGGCTAGAGGTGAGGATGGGACTGAGGAGGCTCTCAATTGTGCTGCTTGTGGCTGTCATAGGAACTTTCATAGAAGGGAGGTTGATAATGCTGAAGTTGTTTTTGAGTATTCTCCTCCAAATTCCAATTATTGA

Protein sequence

MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY

Homology

[Close]

BLAST of Sed0015362 vs. NCBI nr
Match: XP_038880256.1 (mini zinc finger protein 3 [Benincasa hispida])

HSP 1 Score: 172.2 bits (435), Expect = 2.2e-39
Identity = 87/96 (90.62%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 1  MKKRLVVVKKSDG-SGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKRLVVVKKSDG SG RN + +S  SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDG
Sbjct: 1  MKKRLVVVKKSDGSSGRRNHNRSSSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60

Query: 61 TEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN 96
          TEEALNCAACGCHRNFHRREVD AEVVFEYSPPNSN
Sbjct: 61 TEEALNCAACGCHRNFHRREVD-AEVVFEYSPPNSN 95

[Close]

BLAST of Sed0015362 vs. NCBI nr
Match: XP_022135253.1 (mini zinc finger protein 3-like [Momordica charantia])

HSP 1 Score: 171.4 bits (433), Expect = 3.8e-39
Identity = 86/96 (89.58%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 1  MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGT 60
          MKKRLVVVKKSDGSG RNRSG+   SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGT
Sbjct: 1  MKKRLVVVKKSDGSGGRNRSGS--GSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGT 60

Query: 61 EEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY 97
          EEAL CAAC CHRNFHRREVD +EVVFEYSPPNS+Y
Sbjct: 61 EEALICAACSCHRNFHRREVD-SEVVFEYSPPNSSY 93

[Close]

BLAST of Sed0015362 vs. NCBI nr
Match: XP_004138166.1 (mini zinc finger protein 3 [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 4.2e-38
Identity = 85/96 (88.54%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MKKRLVVVKKSDGS-GSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKRLVVV+KSDGS G RN   +S  S VRYAECQKNHAAKLGGFAVDGCREFMARGEDG
Sbjct: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60

Query: 61 TEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN 96
          TEEALNCAACGCHRNFHRREVD AEVVFEYSPPNSN
Sbjct: 61 TEEALNCAACGCHRNFHRREVD-AEVVFEYSPPNSN 95

[Close]

BLAST of Sed0015362 vs. NCBI nr
Match: XP_022921765.1 (mini zinc finger protein 3-like [Cucurbita moschata] >KAG6589505.1 Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167.2 bits (422), Expect = 7.1e-38
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MKKRLVVVKKSDGSGSR-NRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKR+VVVKKSDGSG R NRSG+   SVVRYAECQKNHAAKLGGFAVDGCREFMARGE+G
Sbjct: 1  MKKRVVVVKKSDGSGGRGNRSGS--GSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEG 60

Query: 61 TEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY 97
          TEEAL+CAACGCHRNFHRREVD AEVVFEYSPPNS++
Sbjct: 61 TEEALSCAACGCHRNFHRREVD-AEVVFEYSPPNSDH 94

[Close]

BLAST of Sed0015362 vs. NCBI nr
Match: XP_022987207.1 (mini zinc finger protein 3-like [Cucurbita maxima])

HSP 1 Score: 166.0 bits (419), Expect = 1.6e-37
Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MKKRLVVVKKSDGSGSR-NRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKR+VVVKKSDGSG R NRSG+   SVVRYAECQKNHAAKLGGFAVDGCREFMARGE+G
Sbjct: 1  MKKRVVVVKKSDGSGGRGNRSGS--GSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEG 60

Query: 61 TEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY 97
          TEEAL+CAACGCHRNFHRR+VD AEVVFEYSPPNS++
Sbjct: 61 TEEALSCAACGCHRNFHRRDVD-AEVVFEYSPPNSDH 94

[Close]

BLAST of Sed0015362 vs. ExPASy Swiss-Prot
Match: Q9CA51 (Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.5e-27
Identity = 64/102 (62.75%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 1   MKKRLVVVKK----SDGSGSRNRSGNSGSSV----VRYAECQKNHAAKLGGFAVDGCREF 60
           MKKR +V+K+    S+ S S   + +S SS     VRY ECQKNHAA +GG+AVDGCREF
Sbjct: 2   MKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCREF 61

Query: 61  MARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNS 95
           MA G +GT +AL CAACGCHRNFHR+EVD  EVV EYSPPN+
Sbjct: 62  MAAGVEGTVDALRCAACGCHRNFHRKEVD-TEVVCEYSPPNA 102

[Close]

BLAST of Sed0015362 vs. ExPASy Swiss-Prot
Match: Q2Q493 (Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 7.7e-27
Identity = 64/95 (67.37%), Postives = 71/95 (74.74%), Query Frame = 0


Query: 1  MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGT 60
          MKKR VV+K+   S +      S SS VRY ECQKNHAA +GG+AVDGCREFMA G D  
Sbjct: 1  MKKRQVVIKQRKSSYTM----TSSSSNVRYVECQKNHAANIGGYAVDGCREFMASGGD-- 60

Query: 61 EEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN 96
           +AL CAACGCHRNFHRREVD  EVV EYSPPN+N
Sbjct: 61 -DALTCAACGCHRNFHRREVD-TEVVCEYSPPNAN 87

[Close]

BLAST of Sed0015362 vs. ExPASy Swiss-Prot
Match: Q9LJW5 (Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22
Identity = 56/99 (56.57%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 1  MKKRLVVVKKSDGSGSRNRSGNSGSSV----VRYAECQKNHAAKLGGFAVDGCREFMA-R 60
          M+KR VV++++      +RS ++ SS+    VRY ECQKNHAA +GG+AVDGCREFMA R
Sbjct: 1  MRKRQVVLRRASPE-EPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASR 60

Query: 61 GEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNS 95
          GE+GT  AL CAACGCHR+FHRRE++   V    SPP++
Sbjct: 61 GEEGTVAALTCAACGCHRSFHRREIETEVVCDCNSPPST 98

[Close]

BLAST of Sed0015362 vs. ExPASy Swiss-Prot
Match: B8BIU8 (Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.1e-20
Identity = 45/71 (63.38%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 25  SSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAE 84
           + VVRY ECQ+NHAA +GG AVDGCREFMA G +GT  AL CAACGCHR+FHRREV+ A 
Sbjct: 30  NKVVRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREVEAAA 89

Query: 85  VVFEYSPPNSN 96
              + S   S+
Sbjct: 90  AECDCSSDTSS 100

[Close]

BLAST of Sed0015362 vs. ExPASy Swiss-Prot
Match: Q2RB28 (Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MIF1 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.1e-20
Identity = 45/71 (63.38%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 25  SSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAE 84
           + VVRY ECQ+NHAA +GG AVDGCREFMA G +GT  AL CAACGCHR+FHRREV+ A 
Sbjct: 30  NKVVRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREVEAAA 89

Query: 85  VVFEYSPPNSN 96
              + S   S+
Sbjct: 90  AECDCSSDTSS 100

[Close]

BLAST of Sed0015362 vs. ExPASy TrEMBL
Match: A0A6J1C4B2 (mini zinc finger protein 3-like OS=Momordica charantia OX=3673 GN=LOC111007261 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.8e-39
Identity = 86/96 (89.58%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 1  MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGT 60
          MKKRLVVVKKSDGSG RNRSG+   SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGT
Sbjct: 1  MKKRLVVVKKSDGSGGRNRSGS--GSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGT 60

Query: 61 EEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY 97
          EEAL CAAC CHRNFHRREVD +EVVFEYSPPNS+Y
Sbjct: 61 EEALICAACSCHRNFHRREVD-SEVVFEYSPPNSSY 93

[Close]

BLAST of Sed0015362 vs. ExPASy TrEMBL
Match: A0A0A0LSA6 (ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009710 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.0e-38
Identity = 85/96 (88.54%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MKKRLVVVKKSDGS-GSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKRLVVV+KSDGS G RN   +S  S VRYAECQKNHAAKLGGFAVDGCREFMARGEDG
Sbjct: 1  MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60

Query: 61 TEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN 96
          TEEALNCAACGCHRNFHRREVD AEVVFEYSPPNSN
Sbjct: 61 TEEALNCAACGCHRNFHRREVD-AEVVFEYSPPNSN 95

[Close]

BLAST of Sed0015362 vs. ExPASy TrEMBL
Match: A0A6J1E6Q9 (mini zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429921 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.5e-38
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MKKRLVVVKKSDGSGSR-NRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKR+VVVKKSDGSG R NRSG+   SVVRYAECQKNHAAKLGGFAVDGCREFMARGE+G
Sbjct: 1  MKKRVVVVKKSDGSGGRGNRSGS--GSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEG 60

Query: 61 TEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY 97
          TEEAL+CAACGCHRNFHRREVD AEVVFEYSPPNS++
Sbjct: 61 TEEALSCAACGCHRNFHRREVD-AEVVFEYSPPNSDH 94

[Close]

BLAST of Sed0015362 vs. ExPASy TrEMBL
Match: A0A6J1J9R5 (mini zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111484829 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.7e-38
Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MKKRLVVVKKSDGSGSR-NRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60
          MKKR+VVVKKSDGSG R NRSG+   SVVRYAECQKNHAAKLGGFAVDGCREFMARGE+G
Sbjct: 1  MKKRVVVVKKSDGSGGRGNRSGS--GSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEG 60

Query: 61 TEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSNY 97
          TEEAL+CAACGCHRNFHRR+VD AEVVFEYSPPNS++
Sbjct: 61 TEEALSCAACGCHRNFHRRDVD-AEVVFEYSPPNSDH 94

[Close]

BLAST of Sed0015362 vs. ExPASy TrEMBL
Match: A0A5A7UWS7 (Mini zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002440 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37
Identity = 88/98 (89.80%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 1  MKKRLVVVKKSDGS-GSRNR--SGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGE 60
          MKKRLVVVKKSDGS G RN   S +SGS  VRYAECQKNHAAKLGGFAVDGCREFMARGE
Sbjct: 1  MKKRLVVVKKSDGSNGRRNHHWSASSGSE-VRYAECQKNHAAKLGGFAVDGCREFMARGE 60

Query: 61 DGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN 96
          DGTEEALNCAACGCHRNFHRREVD AEVVFEYSPPNSN
Sbjct: 61 DGTEEALNCAACGCHRNFHRREVD-AEVVFEYSPPNSN 96

[Close]

BLAST of Sed0015362 vs. TAIR 10
Match: AT1G74660.1 (mini zinc finger 1 )

HSP 1 Score: 121.7 bits (304), Expect = 3.2e-28
Identity = 64/102 (62.75%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 1   MKKRLVVVKK----SDGSGSRNRSGNSGSSV----VRYAECQKNHAAKLGGFAVDGCREF 60
           MKKR +V+K+    S+ S S   + +S SS     VRY ECQKNHAA +GG+AVDGCREF
Sbjct: 2   MKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCREF 61

Query: 61  MARGEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNS 95
           MA G +GT +AL CAACGCHRNFHR+EVD  EVV EYSPPN+
Sbjct: 62  MAAGVEGTVDALRCAACGCHRNFHRKEVD-TEVVCEYSPPNA 102

[Close]

BLAST of Sed0015362 vs. TAIR 10
Match: AT1G18835.1 (mini zinc finger )

HSP 1 Score: 120.9 bits (302), Expect = 5.5e-28
Identity = 64/95 (67.37%), Postives = 71/95 (74.74%), Query Frame = 0


Query: 1  MKKRLVVVKKSDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGT 60
          MKKR VV+K+   S +      S SS VRY ECQKNHAA +GG+AVDGCREFMA G D  
Sbjct: 1  MKKRQVVIKQRKSSYTM----TSSSSNVRYVECQKNHAANIGGYAVDGCREFMASGGD-- 60

Query: 61 EEALNCAACGCHRNFHRREVDNAEVVFEYSPPNSN 96
           +AL CAACGCHRNFHRREVD  EVV EYSPPN+N
Sbjct: 61 -DALTCAACGCHRNFHRREVD-TEVVCEYSPPNAN 87

[Close]

BLAST of Sed0015362 vs. TAIR 10
Match: AT3G28917.1 (mini zinc finger 2 )

HSP 1 Score: 107.1 bits (266), Expect = 8.2e-24
Identity = 56/99 (56.57%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 1  MKKRLVVVKKSDGSGSRNRSGNSGSSV----VRYAECQKNHAAKLGGFAVDGCREFMA-R 60
          M+KR VV++++      +RS ++ SS+    VRY ECQKNHAA +GG+AVDGCREFMA R
Sbjct: 1  MRKRQVVLRRASPE-EPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASR 60

Query: 61 GEDGTEEALNCAACGCHRNFHRREVDNAEVVFEYSPPNS 95
          GE+GT  AL CAACGCHR+FHRRE++   V    SPP++
Sbjct: 61 GEEGTVAALTCAACGCHRSFHRREIETEVVCDCNSPPST 98

[Close]

BLAST of Sed0015362 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 )

HSP 1 Score: 93.6 bits (231), Expect = 9.3e-20
Identity = 44/72 (61.11%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 11  SDGSGSRNRSGNSGSSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACG 70
           S G G   RS   G+  +RY EC KNHA  +GG AVDGC EFM  GEDGT +AL CAACG
Sbjct: 31  SSGGGGVGRSKGVGAK-IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACG 90

Query: 71  CHRNFHRREVDN 83
           CHRNFHR+E ++
Sbjct: 91  CHRNFHRKETES 101

[Close]

BLAST of Sed0015362 vs. TAIR 10
Match: AT2G02540.1 (homeobox protein 21 )

HSP 1 Score: 90.9 bits (224), Expect = 6.0e-19
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 27  VVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALNCAACGCHRNFHRREVDNAEVV 86
           V++Y EC KNHAA +GG A+DGC EFM  GE+G+ EAL C+ C CHRNFHRRE +  E  
Sbjct: 84  VIKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETEGEEKT 143

Query: 87  FEYSP 92
           F +SP
Sbjct: 144 F-FSP 147

The following BLAST results are available for this feature:

BLAST of Sed0015362 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880256.1	2.2e-39	90.63	mini zinc finger protein 3 [Benincasa hispida]	[more]
XP_022135253.1	3.8e-39	89.58	mini zinc finger protein 3-like [Momordica charantia]	[more]
XP_004138166.1	4.2e-38	88.54	mini zinc finger protein 3 [Cucumis sativus]	[more]
XP_022921765.1	7.1e-38	87.63	mini zinc finger protein 3-like [Cucurbita moschata] >KAG6589505.1 Mini zinc fin...	[more]
XP_022987207.1	1.6e-37	86.60	mini zinc finger protein 3-like [Cucurbita maxima]	[more]

BLAST of Sed0015362 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA51	4.5e-27	62.75	Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1	[more]
Q2Q493	7.7e-27	67.37	Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1	[more]
Q9LJW5	1.1e-22	56.57	Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1	[more]
B8BIU8	4.1e-20	63.38	Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 S...	[more]
Q2RB28	4.1e-20	63.38	Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MIF1 PE=3...	[more]

BLAST of Sed0015362 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4B2	1.8e-39	89.58	mini zinc finger protein 3-like OS=Momordica charantia OX=3673 GN=LOC111007261 P...	[more]
A0A0A0LSA6	2.0e-38	88.54	ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=...	[more]
A0A6J1E6Q9	3.5e-38	87.63	mini zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429921 PE...	[more]
A0A6J1J9R5	7.7e-38	86.60	mini zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111484829 PE=4...	[more]
A0A5A7UWS7	1.3e-37	89.80	Mini zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of Sed0015362 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74660.1	3.2e-28	62.75	mini zinc finger 1	[more]
AT1G18835.1	5.5e-28	67.37	mini zinc finger	[more]
AT3G28917.1	8.2e-24	56.57	mini zinc finger 2	[more]
AT4G24660.1	9.3e-20	61.11	homeobox protein 22	[more]
AT2G02540.1	6.0e-19	60.00	homeobox protein 21	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 28..80 e-value: 1.4E-29 score: 102.2
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAM	TIGR01566	TIGR01566	coord: 29..80 e-value: 8.4E-27 score: 91.4
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROSITE	PS51523	ZF_HD_DIMER	coord: 30..79 score: 25.362278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR31948	ZINC-FINGER HOMEODOMAIN PROTEIN 2	coord: 1..93
None	No IPR available	PANTHER	PTHR31948:SF65	MINI ZINC FINGER PROTEIN 1	coord: 9..93
None	No IPR available	PANTHER	PTHR31948:SF107	MINI ZINC FINGER PROTEIN 3	coord: 1..93
None	No IPR available	PANTHER	PTHR31948	ZINC-FINGER HOMEODOMAIN PROTEIN 2	coord: 9..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015362.1	Sed0015362.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding