Sed0015242 (gene) Chayote v1

Overview


Name	Sed0015242
Type	gene
Organism	Sechium edule (Chayote v1)
Description	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic
Location	LG11: 32280409 .. 32281404 (-)
RNA-Seq Expression	Sed0015242
Synteny	Sed0015242

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAAACTAGCGGCTCAACATGGTTGAGGCCCCACCAAAGGCAGCAGATGTAGGCTGCAAGTATCTCATCCATAGAAACTTATGTAGTAGTAGTGGTTTTGGTTCAAGTCTCTTCTCTTGGCCATGGCCATGGCCTCCCCTCCTATTCTCAATTCTCTGTTCTCGAACAGATCCTTCCACTCGCCTGCTCGAGTCTACCATCCATGGCGGGTTTATGCAACTCAAGCTCCCAACAACAACCAAAAACCTCCACCGGGCGTCGACACGAGAATTCATTGGCAAAGTGAAGAAGAAGGTTGGATTGGAGGCCCAACACCTTCCCAATCTCAACGCCAGAAGAAGGAGAGTAATGATATCTTGGGTTCAAGTTTGGCTGACTTGCTCAATAACTCAACAGATTCTCACTACCAGTAAGTACTCACCTTATTTTTTTCATCGGCTTAAGTTTTTTGGTTGATTAGTAGTTCAACAATTCAACAAGTATTCGGAGGTCCCAAGTTCAAGTCCCTACCGAATTACCCTTACTTATATATGTGTGTTTGGTGCAGGTTCTTAGGAGTCAGTGCAGAGGCTGAGCTAGAAGAGATAAAGAGCGCATATCGGAGACTGTCGAAAGAATACCATCCCGACACGACCTCGCTCCCTCTAAGAGCTGCATCAGAGAAATTCATGAAGCTAAAACAAGTGTACGAGGAGCTCAGCAACGAAGAGAGCCGCAAGTTCTACGACTGGACGCTAGCTCAAGAAGAGGCGAGCCGCCAAGCGGACAAGTTGAGGATGAAGTTGGAAGATCCTTACCAGAAAGAGTTGAAAAACTTTAAATCCACACCAGACATGGTGGATAGGCTTGGAGGAAGGAACATGGAGTTGGGTGATCAGGCCACCACAGCTCTTACATTGGATATCTTTATCATTCTCTTTGCTATAGCCTGCATTGTATATGTACTCATTTTTAAAGAACCATATTATTAATAGCTAAGTTACATTCAATTATA

mRNA sequence

ATAAAAACTAGCGGCTCAACATGGTTGAGGCCCCACCAAAGGCAGCAGATGTAGGCTGCAAGTATCTCATCCATAGAAACTTATGTAGTAGTAGTGGTTTTGGTTCAAGTCTCTTCTCTTGGCCATGGCCATGGCCTCCCCTCCTATTCTCAATTCTCTGTTCTCGAACAGATCCTTCCACTCGCCTGCTCGAGTCTACCATCCATGGCGGGTTTATGCAACTCAAGCTCCCAACAACAACCAAAAACCTCCACCGGGCGTCGACACGAGAATTCATTGGCAAAGTGAAGAAGAAGGTTGGATTGGAGGCCCAACACCTTCCCAATCTCAACGCCAGAAGAAGGAGAGTAATGATATCTTGGGTTCAAGTTTGGCTGACTTGCTCAATAACTCAACAGATTCTCACTACCAGTTCTTAGGAGTCAGTGCAGAGGCTGAGCTAGAAGAGATAAAGAGCGCATATCGGAGACTGTCGAAAGAATACCATCCCGACACGACCTCGCTCCCTCTAAGAGCTGCATCAGAGAAATTCATGAAGCTAAAACAAGTGTACGAGGAGCTCAGCAACGAAGAGAGCCGCAAGTTCTACGACTGGACGCTAGCTCAAGAAGAGGCGAGCCGCCAAGCGGACAAGTTGAGGATGAAGTTGGAAGATCCTTACCAGAAAGAGTTGAAAAACTTTAAATCCACACCAGACATGGTGGATAGGCTTGGAGGAAGGAACATGGAGTTGGGTGATCAGGCCACCACAGCTCTTACATTGGATATCTTTATCATTCTCTTTGCTATAGCCTGCATTGTATATGTACTCATTTTTAAAGAACCATATTATTAATAGCTAAGTTACATTCAATTATA

Coding sequence (CDS)

ATGGCCATGGCCTCCCCTCCTATTCTCAATTCTCTGTTCTCGAACAGATCCTTCCACTCGCCTGCTCGAGTCTACCATCCATGGCGGGTTTATGCAACTCAAGCTCCCAACAACAACCAAAAACCTCCACCGGGCGTCGACACGAGAATTCATTGGCAAAGTGAAGAAGAAGGTTGGATTGGAGGCCCAACACCTTCCCAATCTCAACGCCAGAAGAAGGAGAGTAATGATATCTTGGGTTCAAGTTTGGCTGACTTGCTCAATAACTCAACAGATTCTCACTACCAGTTCTTAGGAGTCAGTGCAGAGGCTGAGCTAGAAGAGATAAAGAGCGCATATCGGAGACTGTCGAAAGAATACCATCCCGACACGACCTCGCTCCCTCTAAGAGCTGCATCAGAGAAATTCATGAAGCTAAAACAAGTGTACGAGGAGCTCAGCAACGAAGAGAGCCGCAAGTTCTACGACTGGACGCTAGCTCAAGAAGAGGCGAGCCGCCAAGCGGACAAGTTGAGGATGAAGTTGGAAGATCCTTACCAGAAAGAGTTGAAAAACTTTAAATCCACACCAGACATGGTGGATAGGCTTGGAGGAAGGAACATGGAGTTGGGTGATCAGGCCACCACAGCTCTTACATTGGATATCTTTATCATTCTCTTTGCTATAGCCTGCATTGTATATGTACTCATTTTTAAAGAACCATATTATTAA

Protein sequence

MAMASPPILNSLFSNRSFHSPARVYHPWRVYATQAPNNNQKPPPGVDTRIHWQSEEEGWIGGPTPSQSQRQKKESNDILGSSLADLLNNSTDSHYQFLGVSAEAELEEIKSAYRRLSKEYHPDTTSLPLRAASEKFMKLKQVYEELSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYQKELKNFKSTPDMVDRLGGRNMELGDQATTALTLDIFIILFAIACIVYVLIFKEPYY

Homology

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BLAST of Sed0015242 vs. NCBI nr
Match: KAG7033427.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 386.7 bits (992), Expect = 1.4e-103
Identity = 195/241 (80.91%), Postives = 217/241 (90.04%), Query Frame = 0


Query: 1   MAMASPPILNSLFSNRSFHSPARVYHPWRVYATQAPNNNQKPPPGVDTRIHWQSEEEGWI 60
           +AMASP I NSLF NR+FHSPAR +  W VYA+Q PNN Q+PPPGVDTRIHWQ++EEGWI
Sbjct: 242 LAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI 301

Query: 61  GGPTPSQSQRQKKE-----SNDILGSSLADLLNNSTDSHYQFLGVSAEAELEEIKSAYRR 120
           GGPTPSQS+R +KE     +N+ LG SL DLLNNS+DSHYQFLGV AEA+LEEIKSAYRR
Sbjct: 302 GGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRR 361

Query: 121 LSKEYHPDTTSLPLRAASEKFMKLKQVYEELSNEESRKFYDWTLAQEEASRQADKLRMKL 180
           LSKEYHPDTTSLPL+AAS+KFMKLKQVYE LSNEESRKFYDWTLAQEEASRQADKLR+KL
Sbjct: 362 LSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKL 421

Query: 181 EDPYQKELKNFKSTPDMVDRLGGRNMELGDQATTALTLDIFIILFAIACIVYVLIFKEPY 237
           EDPY++EL+N+KSTPDMVDRL GRNM+L DQATTALTLDI IILFAI CIVYVL+FKEPY
Sbjct: 422 EDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPY 481

[Close]

BLAST of Sed0015242 vs. NCBI nr
Match: KAG6602740.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 386.7 bits (992), Expect = 1.4e-103
Identity = 195/241 (80.91%), Postives = 217/241 (90.04%), Query Frame = 0


Query: 1   MAMASPPILNSLFSNRSFHSPARVYHPWRVYATQAPNNNQKPPPGVDTRIHWQSEEEGWI 60
           +AMASP I NSLF NR+FHSPAR +  W VYA+Q PNN Q+PPPGVDTRIHWQ++EEGWI
Sbjct: 233 LAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI 292

Query: 61  GGPTPSQSQRQKKE-----SNDILGSSLADLLNNSTDSHYQFLGVSAEAELEEIKSAYRR 120
           GGPTPSQS+R +KE     +N+ LG SL DLLNNS+DSHYQFLGV AEA+LEEIKSAYRR
Sbjct: 293 GGPTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRR 352

Query: 121 LSKEYHPDTTSLPLRAASEKFMKLKQVYEELSNEESRKFYDWTLAQEEASRQADKLRMKL 180
           LSKEYHPDTTSLPL+AAS+KFMKLKQVYE LSNEESRKFYDWTLAQEEASRQADKLR+KL
Sbjct: 353 LSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKL 412

Query: 181 EDPYQKELKNFKSTPDMVDRLGGRNMELGDQATTALTLDIFIILFAIACIVYVLIFKEPY 237
           EDPY++EL+N+KSTPDMVDRL GRNM+L DQATTALTLDI IILFAI CIVYVL+FKEPY
Sbjct: 413 EDPYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPY 472

[Close]

BLAST of Sed0015242 vs. NCBI nr
Match: XP_022990181.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita maxima])

HSP 1 Score: 386.3 bits (991), Expect = 1.8e-103
Identity = 196/237 (82.70%), Postives = 218/237 (91.98%), Query Frame = 0


Query: 1   MAMASPPILNSLFSNRSFHSPARVYHPWRVYATQAPNNNQKPPPGVDTRIHWQSEEEGWI 60
           MAMAS PI NSLF NR+FHSPAR +  W VYA+Q PNN Q+PPPGVDTRIHWQ++EEGWI
Sbjct: 1   MAMAS-PIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI 60

Query: 61  GGPTPSQSQR-QKKESNDILGSSLADLLNNSTDSHYQFLGVSAEAELEEIKSAYRRLSKE 120
           GGPTPSQS+R QK+++N+ LG S ADLLNNS+DSHYQFLGV AEA+LEEIKSAYRRLSKE
Sbjct: 61  GGPTPSQSRRDQKEQNNNALGPSFADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKE 120

Query: 121 YHPDTTSLPLRAASEKFMKLKQVYEELSNEESRKFYDWTLAQEEASRQADKLRMKLEDPY 180
           YHPDTTSLPL+AAS+KFMKLKQVYE LSNEESRKFYDWTLAQEEASRQADKLR+KLEDPY
Sbjct: 121 YHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPY 180

Query: 181 QKELKNFKSTPDMVDRLGGRNMELGDQATTALTLDIFIILFAIACIVYVLIFKEPYY 237
           ++EL+N+KSTPDMVDRL GRNM+L DQATTALTLDI IILFAI CIVYVL+FKEPYY
Sbjct: 181 EQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 236

[Close]

BLAST of Sed0015242 vs. NCBI nr
Match: XP_023521950.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023553300.1 NAD(P)H-quinone oxidoreductase subunit T, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385.2 bits (988), Expect = 4.1e-103
Identity = 195/241 (80.91%), Postives = 217/241 (90.04%), Query Frame = 0


Query: 1   MAMASPPILNSLFSNRSFHSPARVYHPWRVYATQAPNNNQKPPPGVDTRIHWQSEEEGWI 60
           MAMASP I NSLF NR+FHSPAR +  W VYA+Q PNN Q+PPPGVDTRIHWQ++EEGWI
Sbjct: 1   MAMASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI 60

Query: 61  GGPTPSQSQRQKKE-----SNDILGSSLADLLNNSTDSHYQFLGVSAEAELEEIKSAYRR 120
           GGP PSQS+R +KE     +N+ LG SLADLLNNS+DSHYQFLGV AEA+LEEIKSAYRR
Sbjct: 61  GGPRPSQSRRDQKEQNNNNNNNALGPSLADLLNNSSDSHYQFLGVGAEADLEEIKSAYRR 120

Query: 121 LSKEYHPDTTSLPLRAASEKFMKLKQVYEELSNEESRKFYDWTLAQEEASRQADKLRMKL 180
           LSKEYHPDTTSLPL+AAS+KFMKLKQVYE LSNEESRKFYDWTLAQEEASRQADKLR+KL
Sbjct: 121 LSKEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKL 180

Query: 181 EDPYQKELKNFKSTPDMVDRLGGRNMELGDQATTALTLDIFIILFAIACIVYVLIFKEPY 237
           EDPY++EL+++KSTPDMVDRL GRNM+L DQATTALTLDI IILFAI CIVYVL+FKEPY
Sbjct: 181 EDPYEQELQSWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPY 240

[Close]

BLAST of Sed0015242 vs. NCBI nr
Match: XP_022963850.1 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita moschata])

HSP 1 Score: 384.8 bits (987), Expect = 5.3e-103
Identity = 194/239 (81.17%), Postives = 215/239 (89.96%), Query Frame = 0


Query: 3   MASPPILNSLFSNRSFHSPARVYHPWRVYATQAPNNNQKPPPGVDTRIHWQSEEEGWIGG 62
           MASP I NSLF NR+FHSPAR +  W VYA+Q PNN Q+PPPGVDTRIHWQ++EEGWIGG
Sbjct: 1   MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGG 60

Query: 63  PTPSQSQRQKKE-----SNDILGSSLADLLNNSTDSHYQFLGVSAEAELEEIKSAYRRLS 122
           PTPSQS+R +KE     +N+ LG SL DLLNNS+DSHYQFLGV AEA+LEEIKSAYRRLS
Sbjct: 61  PTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLS 120

Query: 123 KEYHPDTTSLPLRAASEKFMKLKQVYEELSNEESRKFYDWTLAQEEASRQADKLRMKLED 182
           KEYHPDTTSLPL+AAS+KFMKLKQVYE LSNEESRKFYDWTLAQEEASRQADKLR+KLED
Sbjct: 121 KEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 180

Query: 183 PYQKELKNFKSTPDMVDRLGGRNMELGDQATTALTLDIFIILFAIACIVYVLIFKEPYY 237
           PY++EL+N+KSTPDMVDRL GRNM+L DQATTALTLDI IILFAI CIVYVL+FKEPYY
Sbjct: 181 PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 239

[Close]

BLAST of Sed0015242 vs. ExPASy Swiss-Prot
Match: Q9SMS0 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhT PE=1 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.0e-73
Identity = 134/208 (64.42%), Postives = 168/208 (80.77%), Query Frame = 0


Query: 29  RVYATQAPNNNQKPPPGVDTRIHWQSEEEGWIGGPTPSQSQRQKKESNDILGSSLADLLN 88
           R+YA+Q P    KP PGVDTRIHW+S +EGWIGG +       + ++N +     A+L+ 
Sbjct: 42  RIYASQGPTKPSKPSPGVDTRIHWESPDEGWIGGRSDPAKSVDEDKTNLLSDEKFAELIK 101

Query: 89  NSTDSHYQFLGVSAEAELEEIKSAYRRLSKEYHPDTTSLPLRAASEKFMKLKQVYEELSN 148
           +S DSHYQFLGVS +A+LEEIKSAYRRLSKEYHPDTTSLPL+ ASEKFMKL++VY  LS+
Sbjct: 102 DSFDSHYQFLGVSTDADLEEIKSAYRRLSKEYHPDTTSLPLKTASEKFMKLREVYNVLSD 161

Query: 149 EESRKFYDWTLAQEEASRQADKLRMKLEDPYQKELKNFKSTPDMVDRLGGRNMELGDQAT 208
           EE+R+FYDWTLAQE ASRQA+K+RMKLEDP +++ + ++S PDMVDRLGGRNMEL DQA 
Sbjct: 162 EETRRFYDWTLAQEVASRQAEKMRMKLEDPKEQDFRGYESIPDMVDRLGGRNMELSDQAM 221

Query: 209 TALTLDIFIILFAIACIVYVLIFKEPYY 237
           TALT DI I+LFA+ CI +V++FK+P Y
Sbjct: 222 TALTFDILIVLFAVCCIAFVIVFKDPSY 249

[Close]

BLAST of Sed0015242 vs. ExPASy Swiss-Prot
Match: Q5KWZ8 (Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.5e-10
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 94  HYQFLGVSAEAELEEIKSAYRRLSKEYHPDTTSLPLRAASEKFMKLKQVYEELSNEESRK 153
           +Y+ LGVS  A  +EIK AYR+LSK+YHPD    P   A+EKF ++K+ YE LS++E R 
Sbjct: 6   YYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAP--DAAEKFKEIKEAYEVLSDDEKRA 65

Query: 154 FYD 157
            YD
Sbjct: 66  RYD 66

[Close]

BLAST of Sed0015242 vs. ExPASy Swiss-Prot
Match: Q75VW3 (Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) OX=608538 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.5e-10
Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 94  HYQFLGVSAEAELEEIKSAYRRLSKEYHPDTTSLPLRAASEKFMKLKQVYEELSNEESRK 153
           +YQ LGVS +A  EEIK AYRRL+KEYHPD ++     ASEKF ++ + Y  LS+EE RK
Sbjct: 6   YYQILGVSKDATAEEIKKAYRRLAKEYHPDISA--DENASEKFKEINEAYHILSDEERRK 65

Query: 154 FYDWTLAQEEASRQAD 170
            YD  L   +     D
Sbjct: 66  EYDRILKSGDEKSYRD 79

[Close]

BLAST of Sed0015242 vs. ExPASy Swiss-Prot
Match: Q45552 (Chaperone protein DnaJ OS=Geobacillus stearothermophilus OX=1422 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.2e-10
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 94  HYQFLGVSAEAELEEIKSAYRRLSKEYHPDTTSLPLRAASEKFMKLKQVYEELSNEESRK 153
           +Y+ LGVS  A  EEIK AYR+LSK+YHPD    P   A+EKF ++K+ YE LS+++ R 
Sbjct: 6   YYEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEP--DAAEKFKEIKEAYEVLSDDQKRA 65

Query: 154 FYD 157
            YD
Sbjct: 66  HYD 66

[Close]

BLAST of Sed0015242 vs. ExPASy Swiss-Prot
Match: C5D4U0 (Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) OX=471223 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.4e-10
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 94  HYQFLGVSAEAELEEIKSAYRRLSKEYHPDTTSLPLRAASEKFMKLKQVYEELSNEESRK 153
           +Y+ LGVS  A  EEIK AYR+LSK+YHPD    P   A+EKF ++K+ YE LS+++ R 
Sbjct: 6   YYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEP--DAAEKFKEIKEAYEVLSDDQKRA 65

Query: 154 FYD 157
            YD
Sbjct: 66  HYD 66

[Close]

BLAST of Sed0015242 vs. ExPASy TrEMBL
Match: A0A6J1JM84 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487152 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.9e-104
Identity = 196/237 (82.70%), Postives = 218/237 (91.98%), Query Frame = 0


Query: 1   MAMASPPILNSLFSNRSFHSPARVYHPWRVYATQAPNNNQKPPPGVDTRIHWQSEEEGWI 60
           MAMAS PI NSLF NR+FHSPAR +  W VYA+Q PNN Q+PPPGVDTRIHWQ++EEGWI
Sbjct: 1   MAMAS-PIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWI 60

Query: 61  GGPTPSQSQR-QKKESNDILGSSLADLLNNSTDSHYQFLGVSAEAELEEIKSAYRRLSKE 120
           GGPTPSQS+R QK+++N+ LG S ADLLNNS+DSHYQFLGV AEA+LEEIKSAYRRLSKE
Sbjct: 61  GGPTPSQSRRDQKEQNNNALGPSFADLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLSKE 120

Query: 121 YHPDTTSLPLRAASEKFMKLKQVYEELSNEESRKFYDWTLAQEEASRQADKLRMKLEDPY 180
           YHPDTTSLPL+AAS+KFMKLKQVYE LSNEESRKFYDWTLAQEEASRQADKLR+KLEDPY
Sbjct: 121 YHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPY 180

Query: 181 QKELKNFKSTPDMVDRLGGRNMELGDQATTALTLDIFIILFAIACIVYVLIFKEPYY 237
           ++EL+N+KSTPDMVDRL GRNM+L DQATTALTLDI IILFAI CIVYVL+FKEPYY
Sbjct: 181 EQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 236

[Close]

BLAST of Sed0015242 vs. ExPASy TrEMBL
Match: A0A6J1HJ56 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464036 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.6e-103
Identity = 194/239 (81.17%), Postives = 215/239 (89.96%), Query Frame = 0


Query: 3   MASPPILNSLFSNRSFHSPARVYHPWRVYATQAPNNNQKPPPGVDTRIHWQSEEEGWIGG 62
           MASP I NSLF NR+FHSPAR +  W VYA+Q PNN Q+PPPGVDTRIHWQ++EEGWIGG
Sbjct: 1   MASPSIPNSLFLNRTFHSPARTFRTWPVYASQPPNNRQRPPPGVDTRIHWQNDEEGWIGG 60

Query: 63  PTPSQSQRQKKE-----SNDILGSSLADLLNNSTDSHYQFLGVSAEAELEEIKSAYRRLS 122
           PTPSQS+R +KE     +N+ LG SL DLLNNS+DSHYQFLGV AEA+LEEIKSAYRRLS
Sbjct: 61  PTPSQSRRDQKEQNNNNNNNALGPSLTDLLNNSSDSHYQFLGVGAEADLEEIKSAYRRLS 120

Query: 123 KEYHPDTTSLPLRAASEKFMKLKQVYEELSNEESRKFYDWTLAQEEASRQADKLRMKLED 182
           KEYHPDTTSLPL+AAS+KFMKLKQVYE LSNEESRKFYDWTLAQEEASRQADKLR+KLED
Sbjct: 121 KEYHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLED 180

Query: 183 PYQKELKNFKSTPDMVDRLGGRNMELGDQATTALTLDIFIILFAIACIVYVLIFKEPYY 237
           PY++EL+N+KSTPDMVDRL GRNM+L DQATTALTLDI IILFAI CIVYVL+FKEPYY
Sbjct: 181 PYEQELQNWKSTPDMVDRLAGRNMDLSDQATTALTLDILIILFAIGCIVYVLLFKEPYY 239

[Close]

BLAST of Sed0015242 vs. ExPASy TrEMBL
Match: A0A5D3BJW7 (NAD(P)H-quinone oxidoreductase subunit T OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002250 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.3e-99
Identity = 191/235 (81.28%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 3   MASPPILNSLFSNRSFHSPARVYHPWRVYATQAPNNN-QKPPPGVDTRIHWQSEEEGWIG 62
           MAS P  NSL  +++FHSPA  +  WRVYA QAPNN+ ++PPPGVDTRIHWQ+EEEGWIG
Sbjct: 1   MASSPFPNSLLFHKTFHSPAPAFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 63  GPTPSQSQRQKKESNDILGSSLADLLNNSTDSHYQFLGVSAEAELEEIKSAYRRLSKEYH 122
           G    +S  Q  ESN++LG SLADLLNNS+DSHYQFLGV AEAE+EEIKSAYRRLSKEYH
Sbjct: 61  G-KKKESNDQNNESNNMLGPSLADLLNNSSDSHYQFLGVGAEAEVEEIKSAYRRLSKEYH 120

Query: 123 PDTTSLPLRAASEKFMKLKQVYEELSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYQK 182
           PDTTSLPL+ ASEKFMKLKQVYE LSNEESRKFYDWTLAQEEASRQADKLR+KLEDPY++
Sbjct: 121 PDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQ 180

Query: 183 ELKNFKSTPDMVDRLGGRNMELGDQATTALTLDIFIILFAIACIVYVLIFKEPYY 237
           EL+N++STPDMVDRLGGRNMEL DQATTALTLDIFIILFAIACIVYVLIFKEPYY
Sbjct: 181 ELQNWQSTPDMVDRLGGRNMELSDQATTALTLDIFIILFAIACIVYVLIFKEPYY 234

[Close]

BLAST of Sed0015242 vs. ExPASy TrEMBL
Match: A0A1S3CHS6 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501040 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.3e-99
Identity = 191/235 (81.28%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 3   MASPPILNSLFSNRSFHSPARVYHPWRVYATQAPNNN-QKPPPGVDTRIHWQSEEEGWIG 62
           MAS P  NSL  +++FHSPA  +  WRVYA QAPNN+ ++PPPGVDTRIHWQ+EEEGWIG
Sbjct: 1   MASSPFPNSLLFHKTFHSPAPAFRTWRVYAAQAPNNDRRRPPPGVDTRIHWQNEEEGWIG 60

Query: 63  GPTPSQSQRQKKESNDILGSSLADLLNNSTDSHYQFLGVSAEAELEEIKSAYRRLSKEYH 122
           G    +S  Q  ESN++LG SLADLLNNS+DSHYQFLGV AEAE+EEIKSAYRRLSKEYH
Sbjct: 61  G-KKKESNDQNNESNNMLGPSLADLLNNSSDSHYQFLGVGAEAEVEEIKSAYRRLSKEYH 120

Query: 123 PDTTSLPLRAASEKFMKLKQVYEELSNEESRKFYDWTLAQEEASRQADKLRMKLEDPYQK 182
           PDTTSLPL+ ASEKFMKLKQVYE LSNEESRKFYDWTLAQEEASRQADKLR+KLEDPY++
Sbjct: 121 PDTTSLPLKVASEKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQADKLRIKLEDPYEQ 180

Query: 183 ELKNFKSTPDMVDRLGGRNMELGDQATTALTLDIFIILFAIACIVYVLIFKEPYY 237
           EL+N++STPDMVDRLGGRNMEL DQATTALTLDIFIILFAIACIVYVLIFKEPYY
Sbjct: 181 ELQNWQSTPDMVDRLGGRNMELSDQATTALTLDIFIILFAIACIVYVLIFKEPYY 234

[Close]

BLAST of Sed0015242 vs. ExPASy TrEMBL
Match: A0A6J1DG49 (NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111020201 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.5e-98
Identity = 195/237 (82.28%), Postives = 214/237 (90.30%), Query Frame = 0


Query: 3   MASPPILNSLFSNRSFHSPARVYHPWRVYATQAPNNNQKPP-PGVDTRIHWQSEEEGWIG 62
           MASPPI NSLF +RS + PAR+   WRVYA+QAPNN Q+P  PGVDTRIHWQ+EEEGWIG
Sbjct: 1   MASPPIPNSLFLHRSSYVPARI---WRVYASQAPNNRQRPSLPGVDTRIHWQNEEEGWIG 60

Query: 63  GPTPSQSQR--QKKESNDILGSSLADLLNNSTDSHYQFLGVSAEAELEEIKSAYRRLSKE 122
           GP PSQS R   K+ES+   G +LA+LLNNS+DSHYQFLGV+AEAELEEIKSAYRRLSKE
Sbjct: 61  GPMPSQSNRDQNKQESS---GPNLAELLNNSSDSHYQFLGVNAEAELEEIKSAYRRLSKE 120

Query: 123 YHPDTTSLPLRAASEKFMKLKQVYEELSNEESRKFYDWTLAQEEASRQADKLRMKLEDPY 182
           YHPDTTSLPL+AAS+KFMKLKQVYE LSNEESRKFYDWTLAQEEASRQA+KLR+KLEDPY
Sbjct: 121 YHPDTTSLPLKAASDKFMKLKQVYEVLSNEESRKFYDWTLAQEEASRQAEKLRIKLEDPY 180

Query: 183 QKELKNFKSTPDMVDRLGGRNMELGDQATTALTLDIFIILFAIACIVYVLIFKEPYY 237
           ++EL+NFKSTPDMVDRL GRNMEL DQATTALTLDIFIILFAI CIVYVLIFKEPYY
Sbjct: 181 EQELENFKSTPDMVDRLAGRNMELSDQATTALTLDIFIILFAICCIVYVLIFKEPYY 231

[Close]

BLAST of Sed0015242 vs. TAIR 10
Match: AT4G09350.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 275.4 bits (703), Expect = 4.3e-74
Identity = 134/208 (64.42%), Postives = 168/208 (80.77%), Query Frame = 0


Query: 29  RVYATQAPNNNQKPPPGVDTRIHWQSEEEGWIGGPTPSQSQRQKKESNDILGSSLADLLN 88
           R+YA+Q P    KP PGVDTRIHW+S +EGWIGG +       + ++N +     A+L+ 
Sbjct: 42  RIYASQGPTKPSKPSPGVDTRIHWESPDEGWIGGRSDPAKSVDEDKTNLLSDEKFAELIK 101

Query: 89  NSTDSHYQFLGVSAEAELEEIKSAYRRLSKEYHPDTTSLPLRAASEKFMKLKQVYEELSN 148
           +S DSHYQFLGVS +A+LEEIKSAYRRLSKEYHPDTTSLPL+ ASEKFMKL++VY  LS+
Sbjct: 102 DSFDSHYQFLGVSTDADLEEIKSAYRRLSKEYHPDTTSLPLKTASEKFMKLREVYNVLSD 161

Query: 149 EESRKFYDWTLAQEEASRQADKLRMKLEDPYQKELKNFKSTPDMVDRLGGRNMELGDQAT 208
           EE+R+FYDWTLAQE ASRQA+K+RMKLEDP +++ + ++S PDMVDRLGGRNMEL DQA 
Sbjct: 162 EETRRFYDWTLAQEVASRQAEKMRMKLEDPKEQDFRGYESIPDMVDRLGGRNMELSDQAM 221

Query: 209 TALTLDIFIILFAIACIVYVLIFKEPYY 237
           TALT DI I+LFA+ CI +V++FK+P Y
Sbjct: 222 TALTFDILIVLFAVCCIAFVIVFKDPSY 249

[Close]

BLAST of Sed0015242 vs. TAIR 10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 90  STDSHYQFLGVSAEAELEEIKSAYRRLSKEYHPDTTSLPLRAASEKFMKLKQVYEELSNE 149
           ++  +Y  LGVS  A  +EIK+AYRRL+++YHPD    P   A+EKF ++   YE LS+E
Sbjct: 72  TSGDYYATLGVSKSANNKEIKAAYRRLARQYHPDVNKEP--GATEKFKEISAAYEVLSDE 131

Query: 150 ESRKFYD 157
           + R  YD
Sbjct: 132 QKRALYD 136

[Close]

BLAST of Sed0015242 vs. TAIR 10
Match: AT1G80030.3 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 90  STDSHYQFLGVSAEAELEEIKSAYRRLSKEYHPDTTSLPLRAASEKFMKLKQVYEELSNE 149
           ++  +Y  LGVS  A  +EIK+AYRRL+++YHPD    P   A+EKF ++   YE LS+E
Sbjct: 72  TSGDYYATLGVSKSANNKEIKAAYRRLARQYHPDVNKEP--GATEKFKEISAAYEVLSDE 131

Query: 150 ESRKFYD 157
           + R  YD
Sbjct: 132 QKRALYD 136

[Close]

BLAST of Sed0015242 vs. TAIR 10
Match: AT1G80030.2 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 90  STDSHYQFLGVSAEAELEEIKSAYRRLSKEYHPDTTSLPLRAASEKFMKLKQVYEELSNE 149
           ++  +Y  LGVS  A  +EIK+AYRRL+++YHPD    P   A+EKF ++   YE LS+E
Sbjct: 72  TSGDYYATLGVSKSANNKEIKAAYRRLARQYHPDVNKEP--GATEKFKEISAAYEVLSDE 131

Query: 150 ESRKFYD 157
           + R  YD
Sbjct: 132 QKRALYD 136

[Close]

BLAST of Sed0015242 vs. TAIR 10
Match: AT3G17830.1 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-09
Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 94  HYQFLGVSAEAELEEIKSAYRRLSKEYHPDTTSLPLRAASEKFMKLKQVYEELSNEESRK 153
           HY  L V+  A L+EIKS+YR+L+++YHPD    P   A +KF ++   YE LS+EE R 
Sbjct: 64  HYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNP--GAEDKFKQISAAYEVLSDEEKRS 123

Query: 154 FYD 157
            YD
Sbjct: 124 AYD 124

The following BLAST results are available for this feature:

BLAST of Sed0015242 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033427.1	1.4e-103	80.91	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita argyrosperma ...	[more]
KAG6602740.1	1.4e-103	80.91	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic, partial [Cucurbita argy...	[more]
XP_022990181.1	1.8e-103	82.70	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita maxima]	[more]
XP_023521950.1	4.1e-103	80.91	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic-like [Cucurbita pepo sub...	[more]
XP_022963850.1	5.3e-103	81.17	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Cucurbita moschata]	[more]

BLAST of Sed0015242 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMS0	6.0e-73	64.42	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q5KWZ8	5.5e-10	52.38	Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=...	[more]
Q75VW3	5.5e-10	50.00	Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12...	[more]
Q45552	7.2e-10	52.38	Chaperone protein DnaJ OS=Geobacillus stearothermophilus OX=1422 GN=dnaJ PE=3 SV...	[more]
C5D4U0	9.4e-10	52.38	Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) OX=471223 GN=dnaJ PE=3 ...	[more]

BLAST of Sed0015242 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JM84	8.9e-104	82.70	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita maxima OX=3...	[more]
A0A6J1HJ56	2.6e-103	81.17	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucurbita moschata OX...	[more]
A0A5D3BJW7	2.3e-99	81.28	NAD(P)H-quinone oxidoreductase subunit T OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CHS6	2.3e-99	81.28	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A6J1DG49	2.5e-98	82.28	NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Momordica charantia O...	[more]

BLAST of Sed0015242 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09350.1	4.3e-74	64.42	Chaperone DnaJ-domain superfamily protein	[more]
AT1G80030.1	1.6e-09	46.27	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT1G80030.3	1.6e-09	46.27	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT1G80030.2	1.6e-09	46.27	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT3G17830.1	2.2e-09	47.62	Molecular chaperone Hsp40/DnaJ family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 99..119
None	No IPR available	COILS	Coil	Coil	coord: 129..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..76
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 113..128 score: 43.45 coord: 95..113 score: 49.48 coord: 131..151 score: 33.76
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 92..151 e-value: 4.5E-17 score: 72.7
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 94..156 e-value: 5.6E-19 score: 68.0
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 93..159 score: 17.664412
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 94..148 e-value: 8.03132E-17 score: 69.8817
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 81..180 e-value: 6.5E-20 score: 73.3
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 16..155
IPR044618	NAD(P)H-quinone oxidoreductase subunit T-like	PANTHER	PTHR45283	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC	coord: 4..235
IPR018253	DnaJ domain, conserved site	PROSITE	PS00636	DNAJ_1	coord: 136..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015242.1	Sed0015242.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)