Sed0015032 (gene) Chayote v1

Overview
NameSed0015032
Typegene
OrganismSechium edule (Chayote v1)
DescriptionProtein GL2-INTERACTING REPRESSOR 2
LocationLG01: 25494988 .. 25500074 (-)
RNA-Seq ExpressionSed0015032
SyntenySed0015032
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGAAATGACAAAATCTGATGTTGGGGTTTTGGACGAAATGGGTGGTCTGATTTTGGCGTAAATCTCAGCTGCTTCCGCTTCTCTCCTCGTCAAATGACTTTCAATCGCTATCTGTACCTGAAGATATGTGCAAGAGAAATGAAAATGGAATGGGGTTGTCTTCAATTCCAATTTCTGCAAAAGGGTTGTTGTCAATTCTTGTGCTTTTGGCTCATCGGCATTTATGGCTTCTCCACGGCAGTCAACCTGGCGAGGAGCCGCTCGGATTTAAATTGTTTCTCGGCGATCCCGTTTTGTAGATGATCAGTAAGGTACTGCCCCTTCAAACCATTCTTTCTTTTGTTCCTCATAATGGTCATATTAATTAGTTTTGTTTTGATGTTGCTGAACTTTTGGGTGAGACATTTGAGCTTGTGATACTGGGTCAAGGATTTTATTTAGAATTCAACATTTATAATCCTAGAAACATGTAACATAATCCTATCCTATGACTTGATACCCTCCTCACTGCCCACACCTATTTATAATCTAACTACTCTAATAAACTCCCAACTATTTGCTAAAATACCAATATTTTATTCCTTATAGCAATCCTATCAGTTTTATATGGATAGTAATACTTCACCCAACTTGTACCTTGTATTGCTTGAATAACCAAATATCTAATTTGTTCCTTCATGATAATTACTATTGTTAGGATACTATGGATCATTTCTCTTGTAGCATAGAACTTTAATTTGTTCCTCCGTGAGTGTCTGAGCCACACGCACCTTGACTATTCTCATGGGACACCCACTTAACCTTATTTGATTTTCGAGGAAATCCATAGAAATTAATTGCCAGATAGATAACTGGATTATCAACCAAGTCAATCTTATTATAGTGTCTAACCACAGGTGAATGTAGAATGGTCTAAGTATGCGTACTCTTACGCTTGAGACTTCTGTTGACTTTGGCATGTATGTGATCTATTTAATTTTCATTTATAATTATGAAAACAATGAATCAAGTATGGGTTGACCTATTCGTATCGTGATTGCGACAAGTTAAAGAAGCAAAGAACTTCGGGGACATGGATTTTTAACTTGTGGCCAGCTCCTAGAATGTGAAGTTTTACGAGTTCCCAATAGCTACTTATTTTAGTGTAGATGGTTATCAACCTAATCTTTGGCCTATCTCCAAGGGGTGGCGCGGTGGTTAAAGACATGACCTTTGAAGGTGTGCTCCCCTCAAGGTTCTAGGTTCGAGACTCATCTATGACATTAATTTGTAGACACCTCCCGAGTCTCCATTCCTTCGATGTCTTCTAGTGTCTGCCCTAGGGACGAGGTGGTTACTCCGGGTATAGTGGTTTCCCAGTTTCCAAAAAAAAAAAACCTAGTCTTTGGCCTGGAAATTGATCTTTTCAAAGTGGTTGATCCAAACTACTTTAAATCACATTGGTTTTTAGTGCAGCCCTGTGCCAGAGGGATTATGAATGAAGAATATTTTCTGTATACTTCTAGAACATATGGAGGGCTTCATTTTTGTAGTGGCCATGATTGTTTATTTTTGGGTCAACAACAATTAGAGTGGGAGATTCAAACCCATGACCTCTTGCTTGCACACACTTTATGCCAATTGAGCTATGCTCATATTGACTCGTGGCAATGATTGTTGATCATCTTCTTAATGCTACCAAGTTATTTAGTCTGTTTCTATTTTACTCTTGGTGCACTGCATATTGTCATTTTACTTCGGTTCTTTTTTGGTTTTCTAAAAATTATTAAAACAGAGATTATGATCTTCTTATCCCAATCAAGTTTTTCTTTCTAAGGTTTTCTCTCTGTTATTATGAAGCCGAACAAGGAAAAACCTAGATGGAGAACTCTTTTTGGTAATAATCTTATCTCTATTGTTTTGTTCCTCAGGAGGTTAAGTGGCATTTACCACTAGAGGACAAATCTATTAATTATTTTTTACTAAACAATAATGGCACCAGATTGGCTCCTATATTTGCACCAAAGGAATCACTTCCTTTTTGTATATAATTCAATTGGTGTAACGGTTACTAAAATATTCATGCAATTCACCTTTTGAATTTCATTGAAGTACTAAATTACAATTTTTTTTTTTTGATTCACTAAATTACAGAATTTGTTGGAGCATTTTCATTAAAATGGCTTCTTTTTTAGAAAAACTTAAAACGGCTTCTTATAGTTATACTTGTACTTCAATTAATCAATATTCTCCTCCCTTGAGATCTATCTTGAATATTTTTTAATTAATATACTGTAATTGTTTGTCAATAAATTCTGAAGAATCATATATTTAGCATCAAGGTTTTCTGTTTACTTTTTCTAAAACTCTTATTAATAAATAGTTTAGTTAAGAATTTAGGTCTGTTTGTTTACATTTGTTACCCTTTGAATTAAAAGCAAAGTAGTAAATAGAACTCCAATCAGTTTATACTGCAATTTTTTCTTTCTCTCTCTCTCTATCTCTCTCTCTCTCTATCTCTCTCTCTCTATATATATATCTTGTTGAATTTGAAGATATTAATAGAACTTTACTTCTATTTAATGCTCTTGCTAGAAGCCTTGATTTTAATATTGTGCATTAAACCATCATGGAGTGACCTAGTGGTCAAAGAGGGCCTTGGGATGCTTAAGGTGATGGGTTCAATCTATGATAGTCACCTACTCAAGAATTAATTTCCTATAGATTTCCTTACATACAAATGTTGTATGGTCAGGAGGTCTGTCCCGTGACATTAGTCGAAGTGTTCGCAAGTTGGTCCGGACAGTCACGGATATAAAAAAAAAATTATTGTGCATTGAAATTTATTATCTACACCACTTCACGCTTATGCATTCAAATGCTTGGTAAGGAAATATCCTTCTCAAATGGGACAAGTACCAGACGTTCTAGAGCATAAATGCTCTTGGTAATCTTTTGAAACACTTACCATATCATGTAAAAATTGTTCTGTTCATCATACTGGCCTCATTGTTATTGTTTCTATGTTATTGCTTTTACTATTGAATATTTAGGTTTTATATTTTACAAAAAATTCTATGGGCAACATCTGTCGTTTAGAAACTTAATTTATTGATTCAACTCTTTGTTTGTTAGCTTCATTTCTTGGTAATCAATTTCGTCTATTTTGGAATGCTCTTAAAGAGGCTAACTTCCATCTACTTGTACAGCTCAGAGTCTTTTAAGTAAGAAAATTCACCCTAGTGGTAAGGGTAACAGATATTCCAACTTTTGCATTTTAGAAATTGCTATTATCACTTTATTTTCTAACATTGTAACGGTTACTAAATTCGACGTGATTATCCACGCAGGTTGGCATTTTATAATTAACTATGCAGAGTCTGTTTAACACTTACCTAAAGACAGCTTAACCGTGAGATTTCCTTATGGTTGGTTTTTCCTCTCCCATCATTTAAGAACTTGACAAGTTTTCTGAAAAGAATACTCTACACTTGCTTGGATTTATTTTTACTAACCATAAATATGGCATACAGATTTCCAGTTGAGCATCTTTGTATACTTGTACCGATGCCTATGCATTAATTTACTATTATTTCTTCTGTTTTTATATATGAAATTGAATAGTCTTACATTTTTAGTCGATTTAATTAGTTTTTAGCCAAGTACTAGATCAGACTTTGCTTGACGACCCACTTTACTGCAAAACACCACACCTTTAATATAAATTGAGGAAATTTGTAGAAATCATTACTCATATTACTCATATCTTTTCGTTCTGGTATGGCTTCAAAACCTCAGAAATCCACTCAGTATCTGGAGCATGCTGGTGATGCAAAGGATTGCAGTGGTAGCGACCTTGAGAGCCATGCTCATAGTCCTGAGTTCTCCTTCAGCGCGAATCAACTCAATCAGGACTTTGACAAATCTCTTGTTCTTAAAAGTTCGTCCGCATATTCATATTCAATTGAATTGAAGAATCGCTCTAATCTAACTATGAAGCAATCAGAAGTTTCTGACACGGTATAATTCTTTTCTAACTTGTAAATATCATAATCTGTGATTGATTTTTTCCTTGAATGATTTTGGTAGTGTTATTTTTTCCCTTACCAAGAAGATTTATGATCTCTTTCCTTTCCCCAAATAAATCTTTTAGCCTACTAAGGAAAAATCTCATATGATCTAGGCATATTTAGGTGAATTCTAATATATTTCTTATTTCTTGTTTGGTGGTTCTGGAAAAAATTCCAGAAGAAGGAAACTAAAAGAAGATATGCGGAGGAAACGGGATTGGCTTCTAATGGAAATGATGCATATTTGGATCTCAAACTGTCTCCTCCAGGGGTCTACTTAAGGGGTAAATCATTGATTGAATCGAAATCGTCATCCCCAAGGTCTCAAGACTCATGTGTATCTGCTGAGGTTGAGTCAAATGCAAACTTGGAGAATAACCCCCGAGTAGAAGGCTCGTCCTTGATTTTGATGGGATGTACTTTTTGCCTCCTTTATATGATGGTGACAGATTCAGATCCCAGATGCCCTAAGTGCAAGAACTCTGGCTTGCTCGACATTTTCCGTGGAAATCAGGCGAAGAGATCGAGAAAGAACTAGTTTGAGTTTACATGGCATGGCTGATTTCAAATGCCCAAGTATGTTCTTTGAACCAATGCCACCCTTGGCTTTTTTTTTCTTAGTGTCCTAAACTGTCTTCCTTGCTGCTGCATGCACCATCTTTTTACTCGGATAATAAGAAGAATAGCATCTTCAATAAACAACATGGTTTGTTTTTCTTTTGCTCTCTTTACACCACATATTAAGAACCGTACCATTTTTCCTTCCTTTTGGCAAATCAAGAGTTTATTTCTTTTTCTGTGCATTTACTCTGTTGAAGACTTTTCTGTGCATTTACTCTGTTTAAGACTTCTCTGTCATTTATTTTTTGTTAAAAGAGAAGGATATGCAGGGCAAAATATGTTATTTTGCTGGCGTATTCGAGAGCGGTAAGGTGGGGAATGAGAAATAGTTCGAATCCGGGGTGTGTGACTCACAAATTGCCTTAGGAGCTCATTAACAAAGAATTCAGCAATTGACTTGGTGAGTTTATCCAGAC

mRNA sequence

GTGAAATGACAAAATCTGATGTTGGGGTTTTGGACGAAATGGGTGGTCTGATTTTGGCGTAAATCTCAGCTGCTTCCGCTTCTCTCCTCGTCAAATGACTTTCAATCGCTATCTGTACCTGAAGATATGTGCAAGAGAAATGAAAATGGAATGGGGTTGTCTTCAATTCCAATTTCTGCAAAAGGGTTGTTGTCAATTCTTGTGCTTTTGGCTCATCGGCATTTATGGCTTCTCCACGGCAGTCAACCTGGCGAGGAGCCGCTCGGATTTAAATTGTTTCTCGGCGATCCCGTTTTGTAGATGATCAGTAAGAAATCCACTCAGTATCTGGAGCATGCTGGTGATGCAAAGGATTGCAGTGGTAGCGACCTTGAGAGCCATGCTCATAGTCCTGAGTTCTCCTTCAGCGCGAATCAACTCAATCAGGACTTTGACAAATCTCTTGTTCTTAAAAGTTCGTCCGCATATTCATATTCAATTGAATTGAAGAATCGCTCTAATCTAACTATGAAGCAATCAGAAGTTTCTGACACGAAGAAGGAAACTAAAAGAAGATATGCGGAGGAAACGGGATTGGCTTCTAATGGAAATGATGCATATTTGGATCTCAAACTGTCTCCTCCAGGGGTCTACTTAAGGGGTAAATCATTGATTGAATCGAAATCGTCATCCCCAAGGTCTCAAGACTCATGTGTATCTGCTGAGGTTGAGTCAAATGCAAACTTGGAGAATAACCCCCGAGTAGAAGGCTCGTCCTTGATTTTGATGGGATGTACTTTTTGCCTCCTTTATATGATGGTGACAGATTCAGATCCCAGATGCCCTAAGTGCAAGAACTCTGGCTTGCTCGACATTTTCCGTGGAAATCAGGCGAAGAGATCGAGAAAGAACTAGTTTGAGTTTACATGGCATGGCTGATTTCAAATGCCCAAGTATGTTCTTTGAACCAATGCCACCCTTGGCTTTTTTTTTCTTAGTGTCCTAAACTGTCTTCCTTGCTGCTGCATGCACCATCTTTTTACTCGGATAATAAGAAGAATAGCATCTTCAATAAACAACATGGTTTGTTTTTCTTTTGCTCTCTTTACACCACATATTAAGAACCGTACCATTTTTCCTTCCTTTTGGCAAATCAAGAGTTTATTTCTTTTTCTGTGCATTTACTCTGTTGAAGACTTTTCTGTGCATTTACTCTGTTTAAGACTTCTCTGTCATTTATTTTTTGTTAAAAGAGAAGGATATGCAGGGCAAAATATGTTATTTTGCTGGCGTATTCGAGAGCGGTAAGGTGGGGAATGAGAAATAGTTCGAATCCGGGGTGTGTGACTCACAAATTGCCTTAGGAGCTCATTAACAAAGAATTCAGCAATTGACTTGGTGAGTTTATCCAGAC

Coding sequence (CDS)

ATGATCAGTAAGAAATCCACTCAGTATCTGGAGCATGCTGGTGATGCAAAGGATTGCAGTGGTAGCGACCTTGAGAGCCATGCTCATAGTCCTGAGTTCTCCTTCAGCGCGAATCAACTCAATCAGGACTTTGACAAATCTCTTGTTCTTAAAAGTTCGTCCGCATATTCATATTCAATTGAATTGAAGAATCGCTCTAATCTAACTATGAAGCAATCAGAAGTTTCTGACACGAAGAAGGAAACTAAAAGAAGATATGCGGAGGAAACGGGATTGGCTTCTAATGGAAATGATGCATATTTGGATCTCAAACTGTCTCCTCCAGGGGTCTACTTAAGGGGTAAATCATTGATTGAATCGAAATCGTCATCCCCAAGGTCTCAAGACTCATGTGTATCTGCTGAGGTTGAGTCAAATGCAAACTTGGAGAATAACCCCCGAGTAGAAGGCTCGTCCTTGATTTTGATGGGATGTACTTTTTGCCTCCTTTATATGATGGTGACAGATTCAGATCCCAGATGCCCTAAGTGCAAGAACTCTGGCTTGCTCGACATTTTCCGTGGAAATCAGGCGAAGAGATCGAGAAAGAACTAG

Protein sequence

MISKKSTQYLEHAGDAKDCSGSDLESHAHSPEFSFSANQLNQDFDKSLVLKSSSAYSYSIELKNRSNLTMKQSEVSDTKKETKRRYAEETGLASNGNDAYLDLKLSPPGVYLRGKSLIESKSSSPRSQDSCVSAEVESNANLENNPRVEGSSLILMGCTFCLLYMMVTDSDPRCPKCKNSGLLDIFRGNQAKRSRKN
Homology
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BLAST of Sed0015032 vs. NCBI nr
Match: XP_038885898.1 (uncharacterized protein LOC120076204 [Benincasa hispida])

HSP 1 Score: 277.3 bits (708), Expect = 1.0e-70
Identity = 153/195 (78.46%), Postives = 165/195 (84.62%), Query Frame = 0 

Query: 5   KSTQYLEHAGDAKDCSGSDLESHAHSPE-FSFSANQLNQDFDKSLVLKSSSAYSYSIELK 64
           ++TQYLEHAGDAKDC G DLES A SPE FS S +QLNQDF+KSLVLK+SS    SIELK
Sbjct: 84  ETTQYLEHAGDAKDCGGDDLESCARSPEDFSLSVDQLNQDFNKSLVLKNSS----SIELK 143

Query: 65  NRSNLTMKQSEVSDTKKETKRRYAEETGLASNGNDAYLDLKLSPPGVYLRGKSLIESKSS 124
           + SNLTMKQSEV D KKETKRRYA E G A+N NDAYLDLKLSPPGVY RGK   ESKSS
Sbjct: 144 DSSNLTMKQSEVPD-KKETKRRYAVEMGTAANENDAYLDLKLSPPGVYSRGKLSNESKSS 203

Query: 125 SPRSQDSCVSAEVESNANLENNP-RVEGSSLILMGCTFCLLYMMVTDSDPRCPKCKNSGL 184
           SPRSQDSC+SAEVESN N ENN  RVE S LI+MGCTFCLLY+MVTD+DPRCPKCKN GL
Sbjct: 204 SPRSQDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGL 263

Query: 185 LDIFRGNQAKRSRKN 198
           LD+FRGNQ KRSRKN
Sbjct: 264 LDVFRGNQVKRSRKN 273

[Close]
BLAST of Sed0015032 vs. NCBI nr
Match: XP_022993469.1 (uncharacterized protein LOC111489470 [Cucurbita maxima])

HSP 1 Score: 268.5 bits (685), Expect = 4.7e-68
Identity = 148/197 (75.13%), Postives = 162/197 (82.23%), Query Frame = 0 

Query: 2   ISKKSTQYLEHAGDAKDCS-GSDLESHAHSPEFSFSANQLNQDFDKSLVLKSSSAYSYSI 61
           I K++TQYLE +GDAKDC+ G DLES     EFS S +QLNQ+F+KSLVLKSSS+ S  I
Sbjct: 75  IGKETTQYLESSGDAKDCAGGGDLESLCSPEEFSSSVDQLNQNFNKSLVLKSSSSRSSPI 134

Query: 62  ELKNRSNLTMKQSEVSDTKKETKRRYAEETGLASNGNDAYLDLKLSPPGVYLRGKSLIES 121
           E+K  S L+MKQSEV+D KKETKRRYA   G   N N AYLDLKLSPPGVYLRGKS  ES
Sbjct: 135 EVKYSSKLSMKQSEVTD-KKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNES 194

Query: 122 KSSSPRSQDSCVSAEVESNANLENNPRVEGSSLILMGCTFCLLYMMVTDSDPRCPKCKNS 181
           KSSSP+SQDSCVSAEVESN NLENN  VEGS LI+MGCTFCLLY+MVTD DPRCP CKNS
Sbjct: 195 KSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNS 254

Query: 182 GLLDIFRGNQAKRSRKN 198
           GLLDIFRGNQ KRSRKN
Sbjct: 255 GLLDIFRGNQPKRSRKN 270

[Close]
BLAST of Sed0015032 vs. NCBI nr
Match: XP_022939372.1 (uncharacterized protein LOC111445310 isoform X1 [Cucurbita moschata] >XP_022939373.1 uncharacterized protein LOC111445310 isoform X1 [Cucurbita moschata])

HSP 1 Score: 267.7 bits (683), Expect = 8.0e-68
Identity = 146/197 (74.11%), Postives = 163/197 (82.74%), Query Frame = 0 

Query: 2   ISKKSTQYLEHAGDAKDCS-GSDLESHAHSPEFSFSANQLNQDFDKSLVLKSSSAYSYSI 61
           + +++TQYLE +GDAKDC+ G DLES     EFS S +QLNQ+F+KSLVLKSSS+ S  I
Sbjct: 50  VEQETTQYLESSGDAKDCAGGGDLESLCSPEEFSSSVDQLNQNFNKSLVLKSSSSRSSPI 109

Query: 62  ELKNRSNLTMKQSEVSDTKKETKRRYAEETGLASNGNDAYLDLKLSPPGVYLRGKSLIES 121
           E+K+ S L+MKQSEV+D KKETKRRYA   G   N N AYLDLKLSPPGVYLRGKS  ES
Sbjct: 110 EVKDSSKLSMKQSEVTD-KKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNES 169

Query: 122 KSSSPRSQDSCVSAEVESNANLENNPRVEGSSLILMGCTFCLLYMMVTDSDPRCPKCKNS 181
           KSSSP+SQDSCVSAEVESN NLENN  VEGS LI+MGCTFCLLY+MVTD DPRCP CKNS
Sbjct: 170 KSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNS 229

Query: 182 GLLDIFRGNQAKRSRKN 198
           GLLDIFRGNQ KRSRKN
Sbjct: 230 GLLDIFRGNQPKRSRKN 245

[Close]
BLAST of Sed0015032 vs. NCBI nr
Match: XP_022939374.1 (uncharacterized protein LOC111445310 isoform X2 [Cucurbita moschata])

HSP 1 Score: 267.7 bits (683), Expect = 8.0e-68
Identity = 146/197 (74.11%), Postives = 163/197 (82.74%), Query Frame = 0 

Query: 2   ISKKSTQYLEHAGDAKDCS-GSDLESHAHSPEFSFSANQLNQDFDKSLVLKSSSAYSYSI 61
           + +++TQYLE +GDAKDC+ G DLES     EFS S +QLNQ+F+KSLVLKSSS+ S  I
Sbjct: 43  VEQETTQYLESSGDAKDCAGGGDLESLCSPEEFSSSVDQLNQNFNKSLVLKSSSSRSSPI 102

Query: 62  ELKNRSNLTMKQSEVSDTKKETKRRYAEETGLASNGNDAYLDLKLSPPGVYLRGKSLIES 121
           E+K+ S L+MKQSEV+D KKETKRRYA   G   N N AYLDLKLSPPGVYLRGKS  ES
Sbjct: 103 EVKDSSKLSMKQSEVTD-KKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNES 162

Query: 122 KSSSPRSQDSCVSAEVESNANLENNPRVEGSSLILMGCTFCLLYMMVTDSDPRCPKCKNS 181
           KSSSP+SQDSCVSAEVESN NLENN  VEGS LI+MGCTFCLLY+MVTD DPRCP CKNS
Sbjct: 163 KSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNS 222

Query: 182 GLLDIFRGNQAKRSRKN 198
           GLLDIFRGNQ KRSRKN
Sbjct: 223 GLLDIFRGNQPKRSRKN 238

[Close]
BLAST of Sed0015032 vs. NCBI nr
Match: TYK11779.1 (uncharacterized protein E5676_scaffold304G001060 [Cucumis melo var. makuwa])

HSP 1 Score: 267.7 bits (683), Expect = 8.0e-68
Identity = 148/196 (75.51%), Postives = 160/196 (81.63%), Query Frame = 0 

Query: 3   SKKSTQYLEHAGDAKDCSGSDLESHAHSPE-FSFSANQLNQDFDKSLVLKSSSAYSYSIE 62
           S+ +TQYLEHA  AKDC G DLES  HSPE FS S +QLNQDF+KSLVLK SS    SIE
Sbjct: 5   SQDTTQYLEHADAAKDCCGDDLESGVHSPEDFSLSVDQLNQDFNKSLVLKGSS----SIE 64

Query: 63  LKNRSNLTMKQSEVSDTKKETKRRYAEETGLASNGNDAYLDLKLSPPGVYLRGKSLIESK 122
           LK+ SNLTM +SE    KKETKRRYA ETG A+N NDAYLDLKLSPPGVY RGKS  ESK
Sbjct: 65  LKDSSNLTMMKSETD--KKETKRRYAVETGTAANENDAYLDLKLSPPGVYSRGKSSNESK 124

Query: 123 SSSPRSQDSCVSAEVESNANLENNPRVEGSSLILMGCTFCLLYMMVTDSDPRCPKCKNSG 182
           SSSP SQDSC+SAEVESN N E+N RVE S LI+MGCTFCLLY+MVTD+DPRCPKCK SG
Sbjct: 125 SSSPSSQDSCISAEVESNLNSEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSG 184

Query: 183 LLDIFRGNQAKRSRKN 198
           LLD FRGNQ KRSRKN
Sbjct: 185 LLDAFRGNQLKRSRKN 194

[Close]
BLAST of Sed0015032 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.4e-12
Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 95  NGNDAYLDLKLSPPGVYLRGKSLIESKS-SSPRSQDSCVSAEVESNANLENNPRVEGSSL 154
           NG    L L LSPP       SL+ S + S+  S  SCVS+E     N E N  +  +S+
Sbjct: 7   NGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSE----TNQEENETI--TSM 66

Query: 155 ILMGCTFCLLYMMVTDSDPRCPKCKNSGLLDIFRGN 190
           +L+GC  CL+Y+M++D DP+CPKCK++ LLD  + N
Sbjct: 67  VLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQEN 96

[Close]
BLAST of Sed0015032 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.0e-09
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 0 

Query: 101 LDLKLSPPGVYLRG--KSLIESKSSSPRS-QDSCVSAEV-ESNANLENNPRVEGSSLILM 160
           L L LSPP    R   +S   S ++SP S   SCVS+E+ +   ++  +   E +S++L+
Sbjct: 10  LKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETTSMVLV 69

Query: 161 GCTFCLLYMMVTDSDPRCPKCKNSGLLDIFRGN 190
           GC  CL+Y+M+++ DP+CPKCK++ LLD    N
Sbjct: 70  GCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHEN 102

[Close]
BLAST of Sed0015032 vs. ExPASy TrEMBL
Match: A0A6J1K099 (uncharacterized protein LOC111489470 OS=Cucurbita maxima OX=3661 GN=LOC111489470 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.3e-68
Identity = 148/197 (75.13%), Postives = 162/197 (82.23%), Query Frame = 0 

Query: 2   ISKKSTQYLEHAGDAKDCS-GSDLESHAHSPEFSFSANQLNQDFDKSLVLKSSSAYSYSI 61
           I K++TQYLE +GDAKDC+ G DLES     EFS S +QLNQ+F+KSLVLKSSS+ S  I
Sbjct: 75  IGKETTQYLESSGDAKDCAGGGDLESLCSPEEFSSSVDQLNQNFNKSLVLKSSSSRSSPI 134

Query: 62  ELKNRSNLTMKQSEVSDTKKETKRRYAEETGLASNGNDAYLDLKLSPPGVYLRGKSLIES 121
           E+K  S L+MKQSEV+D KKETKRRYA   G   N N AYLDLKLSPPGVYLRGKS  ES
Sbjct: 135 EVKYSSKLSMKQSEVTD-KKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNES 194

Query: 122 KSSSPRSQDSCVSAEVESNANLENNPRVEGSSLILMGCTFCLLYMMVTDSDPRCPKCKNS 181
           KSSSP+SQDSCVSAEVESN NLENN  VEGS LI+MGCTFCLLY+MVTD DPRCP CKNS
Sbjct: 195 KSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNS 254

Query: 182 GLLDIFRGNQAKRSRKN 198
           GLLDIFRGNQ KRSRKN
Sbjct: 255 GLLDIFRGNQPKRSRKN 270

[Close]
BLAST of Sed0015032 vs. ExPASy TrEMBL
Match: A0A6J1FLG8 (uncharacterized protein LOC111445310 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445310 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.9e-68
Identity = 146/197 (74.11%), Postives = 163/197 (82.74%), Query Frame = 0 

Query: 2   ISKKSTQYLEHAGDAKDCS-GSDLESHAHSPEFSFSANQLNQDFDKSLVLKSSSAYSYSI 61
           + +++TQYLE +GDAKDC+ G DLES     EFS S +QLNQ+F+KSLVLKSSS+ S  I
Sbjct: 50  VEQETTQYLESSGDAKDCAGGGDLESLCSPEEFSSSVDQLNQNFNKSLVLKSSSSRSSPI 109

Query: 62  ELKNRSNLTMKQSEVSDTKKETKRRYAEETGLASNGNDAYLDLKLSPPGVYLRGKSLIES 121
           E+K+ S L+MKQSEV+D KKETKRRYA   G   N N AYLDLKLSPPGVYLRGKS  ES
Sbjct: 110 EVKDSSKLSMKQSEVTD-KKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNES 169

Query: 122 KSSSPRSQDSCVSAEVESNANLENNPRVEGSSLILMGCTFCLLYMMVTDSDPRCPKCKNS 181
           KSSSP+SQDSCVSAEVESN NLENN  VEGS LI+MGCTFCLLY+MVTD DPRCP CKNS
Sbjct: 170 KSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNS 229

Query: 182 GLLDIFRGNQAKRSRKN 198
           GLLDIFRGNQ KRSRKN
Sbjct: 230 GLLDIFRGNQPKRSRKN 245

[Close]
BLAST of Sed0015032 vs. ExPASy TrEMBL
Match: A0A5D3CNF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G001060 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.9e-68
Identity = 148/196 (75.51%), Postives = 160/196 (81.63%), Query Frame = 0 

Query: 3   SKKSTQYLEHAGDAKDCSGSDLESHAHSPE-FSFSANQLNQDFDKSLVLKSSSAYSYSIE 62
           S+ +TQYLEHA  AKDC G DLES  HSPE FS S +QLNQDF+KSLVLK SS    SIE
Sbjct: 5   SQDTTQYLEHADAAKDCCGDDLESGVHSPEDFSLSVDQLNQDFNKSLVLKGSS----SIE 64

Query: 63  LKNRSNLTMKQSEVSDTKKETKRRYAEETGLASNGNDAYLDLKLSPPGVYLRGKSLIESK 122
           LK+ SNLTM +SE    KKETKRRYA ETG A+N NDAYLDLKLSPPGVY RGKS  ESK
Sbjct: 65  LKDSSNLTMMKSETD--KKETKRRYAVETGTAANENDAYLDLKLSPPGVYSRGKSSNESK 124

Query: 123 SSSPRSQDSCVSAEVESNANLENNPRVEGSSLILMGCTFCLLYMMVTDSDPRCPKCKNSG 182
           SSSP SQDSC+SAEVESN N E+N RVE S LI+MGCTFCLLY+MVTD+DPRCPKCK SG
Sbjct: 125 SSSPSSQDSCISAEVESNLNSEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSG 184

Query: 183 LLDIFRGNQAKRSRKN 198
           LLD FRGNQ KRSRKN
Sbjct: 185 LLDAFRGNQLKRSRKN 194

[Close]
BLAST of Sed0015032 vs. ExPASy TrEMBL
Match: A0A6J1FGZ2 (uncharacterized protein LOC111445310 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445310 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.9e-68
Identity = 146/197 (74.11%), Postives = 163/197 (82.74%), Query Frame = 0 

Query: 2   ISKKSTQYLEHAGDAKDCS-GSDLESHAHSPEFSFSANQLNQDFDKSLVLKSSSAYSYSI 61
           + +++TQYLE +GDAKDC+ G DLES     EFS S +QLNQ+F+KSLVLKSSS+ S  I
Sbjct: 43  VEQETTQYLESSGDAKDCAGGGDLESLCSPEEFSSSVDQLNQNFNKSLVLKSSSSRSSPI 102

Query: 62  ELKNRSNLTMKQSEVSDTKKETKRRYAEETGLASNGNDAYLDLKLSPPGVYLRGKSLIES 121
           E+K+ S L+MKQSEV+D KKETKRRYA   G   N N AYLDLKLSPPGVYLRGKS  ES
Sbjct: 103 EVKDSSKLSMKQSEVTD-KKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNES 162

Query: 122 KSSSPRSQDSCVSAEVESNANLENNPRVEGSSLILMGCTFCLLYMMVTDSDPRCPKCKNS 181
           KSSSP+SQDSCVSAEVESN NLENN  VEGS LI+MGCTFCLLY+MVTD DPRCP CKNS
Sbjct: 163 KSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNS 222

Query: 182 GLLDIFRGNQAKRSRKN 198
           GLLDIFRGNQ KRSRKN
Sbjct: 223 GLLDIFRGNQPKRSRKN 238

[Close]
BLAST of Sed0015032 vs. ExPASy TrEMBL
Match: A0A1S3C4C1 (uncharacterized protein LOC103496521 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496521 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 8.6e-68
Identity = 147/193 (76.17%), Postives = 158/193 (81.87%), Query Frame = 0 

Query: 6   STQYLEHAGDAKDCSGSDLESHAHSPE-FSFSANQLNQDFDKSLVLKSSSAYSYSIELKN 65
           +TQYLEHA  AKDC G DLES  HSPE FS S +QLNQDF+KSLVLK SS    SIELK+
Sbjct: 11  TTQYLEHADAAKDCCGDDLESGVHSPEDFSLSVDQLNQDFNKSLVLKGSS----SIELKD 70

Query: 66  RSNLTMKQSEVSDTKKETKRRYAEETGLASNGNDAYLDLKLSPPGVYLRGKSLIESKSSS 125
            SNLTM +SE    KKETKRRYA ETG A+N NDAYLDLKLSPPGVY RGKS  ESKSSS
Sbjct: 71  SSNLTMMKSETD--KKETKRRYAVETGTAANENDAYLDLKLSPPGVYSRGKSSNESKSSS 130

Query: 126 PRSQDSCVSAEVESNANLENNPRVEGSSLILMGCTFCLLYMMVTDSDPRCPKCKNSGLLD 185
           P SQDSC+SAEVESN N E+N RVE S LI+MGCTFCLLY+MVTD+DPRCPKCK SGLLD
Sbjct: 131 PSSQDSCISAEVESNLNSEDNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLD 190

Query: 186 IFRGNQAKRSRKN 198
            FRGNQ KRSRKN
Sbjct: 191 AFRGNQLKRSRKN 197

[Close]
BLAST of Sed0015032 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 4.6e-13
Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 95  NGNDAYLDLKLSPPGVYLRGKSLIESKS-SSPRSQDSCVSAEVESNANLENNPRVEGSSL 154
           NG    L L LSPP       SL+ S + S+  S  SCVS+E     N E N  +  +S+
Sbjct: 7   NGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSE----TNQEENETI--TSM 66

Query: 155 ILMGCTFCLLYMMVTDSDPRCPKCKNSGLLDIFRGN 190
           +L+GC  CL+Y+M++D DP+CPKCK++ LLD  + N
Sbjct: 67  VLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQEN 96

[Close]
BLAST of Sed0015032 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 7.3e-11
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 0 

Query: 101 LDLKLSPPGVYLRG--KSLIESKSSSPRS-QDSCVSAEV-ESNANLENNPRVEGSSLILM 160
           L L LSPP    R   +S   S ++SP S   SCVS+E+ +   ++  +   E +S++L+
Sbjct: 10  LKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETTSMVLV 69

Query: 161 GCTFCLLYMMVTDSDPRCPKCKNSGLLDIFRGN 190
           GC  CL+Y+M+++ DP+CPKCK++ LLD    N
Sbjct: 70  GCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHEN 102

[Close]
BLAST of Sed0015032 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04
Identity = 21/64 (32.81%), Postives = 36/64 (56.25%), Query Frame = 0 

Query: 122 SSSPRSQDSCVSAEVESNANLENN--PRVEGSSLILMGCTFCLLYMMVTDSDPRCPKCKN 181
           S +  SQ+SC++   E    + ++     E   +++MGC  C++Y+MV     RCPKCK 
Sbjct: 34  SDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQRCPKCKC 93

Query: 182 SGLL 184
           + L+
Sbjct: 94  TDLI 97

The following BLAST results are available for this feature:
BLAST of Sed0015032 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038885898.11.0e-7078.46uncharacterized protein LOC120076204 [Benincasa hispida][more]
XP_022993469.14.7e-6875.13uncharacterized protein LOC111489470 [Cucurbita maxima][more]
XP_022939372.18.0e-6874.11uncharacterized protein LOC111445310 isoform X1 [Cucurbita moschata] >XP_0229393... [more]
XP_022939374.18.0e-6874.11uncharacterized protein LOC111445310 isoform X2 [Cucurbita moschata][more]
TYK11779.18.0e-6875.51uncharacterized protein E5676_scaffold304G001060 [Cucumis melo var. makuwa][more]
BLAST of Sed0015032 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SRN46.4e-1242.71Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1... [more]
Q9FNI11.0e-0939.78Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1... [more]
BLAST of Sed0015032 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K0992.3e-6875.13uncharacterized protein LOC111489470 OS=Cucurbita maxima OX=3661 GN=LOC111489470... [more]
A0A6J1FLG83.9e-6874.11uncharacterized protein LOC111445310 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A5D3CNF73.9e-6875.51Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1FGZ23.9e-6874.11uncharacterized protein LOC111445310 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A1S3C4C18.6e-6876.17uncharacterized protein LOC103496521 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Sed0015032 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G11600.14.6e-1342.71unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
AT5G06270.17.3e-1139.78unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G52561.11.0e-0432.81unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePANTHERPTHR33177:SF51GB|AAF02129.1coord: 60..192
NoneNo IPR availablePANTHERPTHR33177PUTATIVE-RELATEDcoord: 60..192

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0015032.1Sed0015032.1mRNA
Sed0015032.2Sed0015032.2mRNA
Sed0015032.3Sed0015032.3mRNA
Sed0015032.4Sed0015032.4mRNA