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Sed0014994 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAGTGGTTGGTCATGGCCATGTGCGTCGTGCAAATTGCTGCGGCGGCGGTGCACAGAGACGTGCGTTTTGGCTCCTTATTTTCCTCCCCATGACCCTTACAAGTTCGCCGTTGTTCACAAGTTCTTTGGCTCTAGCAATATCACCAAAATGTTACAGGTCTTTTCTTTTTCTTTTTCGTCGTGTGGTACTATGTACGGTTTATCTTATTGCTTAATTATAATAATTTGCATTCTAAATATCAATGCCCGAAATATGTATTCTCTTTAATGTATGAAAAAAAAAATTATAAAATTAAATCTCACTTCTTTTCTAGTACAAGTTGAGGGAAGGAGAATTATAAATATCGATTCTAATAATAAAATAATTATATTTTTTTATTGAGTATATACCTTCATCTTGTTGAACTATTGTTTTTGTTGATAATTTTAAAATCTAAATTTAAAATCAATGTGTTAAAATGCAACTGTTTCAGTAAATATTGTCTAATTTCGAGATGTAAAACATTTTTCTTTTTCTTTTTTTGAGTACACTAATAACATTTTTCTAATTTAGTATGTTCATAGTTATATGGGTTTGAGATGTAATGACTTGATCCTCTATTTTTTTTTCTTGTTTATTTTGGGAATCGTTCCATTTGACGGTTCGAAAAGTTATTTCAAAAGGGGATGTATTTACTAGAATTTGATTTAAAAGTAAATAGATTTTGAACTTAGAAATTAGAGAGCAAACCATAAACTATTGAGTGCATAATCTAAAAAAAAAAAAATGTAATCTTGTCTGGTATTAATCCATTTCAACTCCACGATCATGAGTTCGAGCTTAGAAATCGGTATTTGGCTCTCATATTATTTGAGAGTAATTGTGCCCTCTATAGGATTTGTTGGTCCCTCTTCCCCCACTATATACTAAAAAAAAAAGTGTGTCATATTTAACATTAAGGCAACAATTTCTCTCTCTAAGATTCAATAAAAACTTCTCAAATAGAGTACTTAGTTCAGTTCAACACGATTACACATTCGACCTTAAAAATCGGCACATGACTCTCATATTGTTTGAGAGGAATTTTACTCTCTAGATAAGATTTATGGTCTCTTTCTTCCCTTCAAAAAAAAAAAACATAGCCTTGCCTACCATGGGATTTATTTAGATTTTGATATATATAAAATATTCTATAAATTTTGCGCTAATTTGGTCTCTCTATATCCTTTAAGAAAAAGCTTTTAGCTTCCATCTTTAACACTAAATGAAATTAATCTTGTGTAGGCGCTTCCCGAAGATCAAAGAGCGGATGCAGCAAACAGTATGGTATATGAAGCGAATGCGAGAATGCAAGATCCAGTGTATGGTTGCGTCGGTATAATCTCGTTCCTACGCAACCATATTTTCCGATTAGAAATGCAGTTGGCAGCAGCACAAGCAGAGATGTTAAGCTTTCAAAGGCAGCAACAAGCAACTGAAGTAACATTTCCAGTGGCACAAATGGACCAAGATTATCAAGATCTTGTTTCTTTCTCAAATGACAATTCTAAGTCCATCAGTAGTTTCCAAGAAGTGGAAGATTGTTACTTTCAATGGACTTAA ATGAGAAGTGGTTGGTCATGGCCATGTGCGTCGTGCAAATTGCTGCGGCGGCGGTGCACAGAGACGTGCGTTTTGGCTCCTTATTTTCCTCCCCATGACCCTTACAAGTTCGCCGTTGTTCACAAGTTCTTTGGCTCTAGCAATATCACCAAAATGTTACAGGCGCTTCCCGAAGATCAAAGAGCGGATGCAGCAAACAGTATGGTATATGAAGCGAATGCGAGAATGCAAGATCCAGTGTATGGTTGCGTCGGTATAATCTCGTTCCTACGCAACCATATTTTCCGATTAGAAATGCAGTTGGCAGCAGCACAAGCAGAGATGTTAAGCTTTCAAAGGCAGCAACAAGCAACTGAAGTAACATTTCCAGTGGCACAAATGGACCAAGATTATCAAGATCTTGTTTCTTTCTCAAATGACAATTCTAAGTCCATCAGTAGTTTCCAAGAAGTGGAAGATTGTTACTTTCAATGGACTTAA ATGAGAAGTGGTTGGTCATGGCCATGTGCGTCGTGCAAATTGCTGCGGCGGCGGTGCACAGAGACGTGCGTTTTGGCTCCTTATTTTCCTCCCCATGACCCTTACAAGTTCGCCGTTGTTCACAAGTTCTTTGGCTCTAGCAATATCACCAAAATGTTACAGGCGCTTCCCGAAGATCAAAGAGCGGATGCAGCAAACAGTATGGTATATGAAGCGAATGCGAGAATGCAAGATCCAGTGTATGGTTGCGTCGGTATAATCTCGTTCCTACGCAACCATATTTTCCGATTAGAAATGCAGTTGGCAGCAGCACAAGCAGAGATGTTAAGCTTTCAAAGGCAGCAACAAGCAACTGAAGTAACATTTCCAGTGGCACAAATGGACCAAGATTATCAAGATCTTGTTTCTTTCTCAAATGACAATTCTAAGTCCATCAGTAGTTTCCAAGAAGTGGAAGATTGTTACTTTCAATGGACTTAA MRSGWSWPCASCKLLRRRCTETCVLAPYFPPHDPYKFAVVHKFFGSSNITKMLQALPEDQRADAANSMVYEANARMQDPVYGCVGIISFLRNHIFRLEMQLAAAQAEMLSFQRQQQATEVTFPVAQMDQDYQDLVSFSNDNSKSISSFQEVEDCYFQWT Homology
BLAST of Sed0014994 vs. NCBI nr
Match: XP_008463841.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]) HSP 1 Score: 208.4 bits (529), Expect = 4.6e-50 Identity = 103/157 (65.61%), Postives = 123/157 (78.34%), Query Frame = 0
BLAST of Sed0014994 vs. NCBI nr
Match: KAG6605396.1 (LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035343.1 LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 207.6 bits (527), Expect = 7.9e-50 Identity = 103/155 (66.45%), Postives = 123/155 (79.35%), Query Frame = 0
BLAST of Sed0014994 vs. NCBI nr
Match: XP_023006803.1 (LOB domain-containing protein 12-like [Cucurbita maxima]) HSP 1 Score: 207.2 bits (526), Expect = 1.0e-49 Identity = 103/155 (66.45%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of Sed0014994 vs. NCBI nr
Match: XP_023533075.1 (LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206.8 bits (525), Expect = 1.3e-49 Identity = 103/155 (66.45%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of Sed0014994 vs. NCBI nr
Match: XP_022947802.1 (LOB domain-containing protein 12-like [Cucurbita moschata]) HSP 1 Score: 204.9 bits (520), Expect = 5.1e-49 Identity = 102/155 (65.81%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of Sed0014994 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 8.2e-42 Identity = 82/136 (60.29%), Postives = 108/136 (79.41%), Query Frame = 0
BLAST of Sed0014994 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 3.9e-36 Identity = 77/135 (57.04%), Postives = 95/135 (70.37%), Query Frame = 0
BLAST of Sed0014994 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2) HSP 1 Score: 146.4 bits (368), Expect = 2.8e-34 Identity = 63/116 (54.31%), Postives = 89/116 (76.72%), Query Frame = 0
BLAST of Sed0014994 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2) HSP 1 Score: 145.6 bits (366), Expect = 4.8e-34 Identity = 66/110 (60.00%), Postives = 80/110 (72.73%), Query Frame = 0
BLAST of Sed0014994 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.4e-33 Identity = 72/126 (57.14%), Postives = 90/126 (71.43%), Query Frame = 0
BLAST of Sed0014994 vs. ExPASy TrEMBL
Match: A0A1S3CKM4 (LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103501884 PE=3 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 2.2e-50 Identity = 103/157 (65.61%), Postives = 123/157 (78.34%), Query Frame = 0
BLAST of Sed0014994 vs. ExPASy TrEMBL
Match: A0A6J1L5Y7 (LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC111499469 PE=3 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 5.0e-50 Identity = 103/155 (66.45%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of Sed0014994 vs. ExPASy TrEMBL
Match: A0A6J1G7F7 (LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111451558 PE=3 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 2.5e-49 Identity = 102/155 (65.81%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of Sed0014994 vs. ExPASy TrEMBL
Match: A0A0A0KBK5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G181550 PE=3 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.3e-47 Identity = 101/158 (63.92%), Postives = 122/158 (77.22%), Query Frame = 0
BLAST of Sed0014994 vs. ExPASy TrEMBL
Match: A0A6J1FX16 (LOB domain-containing protein 12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449031 PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 3.5e-43 Identity = 86/124 (69.35%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of Sed0014994 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 171.4 bits (433), Expect = 5.8e-43 Identity = 82/136 (60.29%), Postives = 108/136 (79.41%), Query Frame = 0
BLAST of Sed0014994 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 ) HSP 1 Score: 152.5 bits (384), Expect = 2.8e-37 Identity = 77/135 (57.04%), Postives = 95/135 (70.37%), Query Frame = 0
BLAST of Sed0014994 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 ) HSP 1 Score: 146.4 bits (368), Expect = 2.0e-35 Identity = 63/116 (54.31%), Postives = 89/116 (76.72%), Query Frame = 0
BLAST of Sed0014994 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 ) HSP 1 Score: 145.6 bits (366), Expect = 3.4e-35 Identity = 66/110 (60.00%), Postives = 80/110 (72.73%), Query Frame = 0
BLAST of Sed0014994 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 ) HSP 1 Score: 144.1 bits (362), Expect = 1.0e-34 Identity = 72/126 (57.14%), Postives = 90/126 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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