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Sed0014956 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGAAATCCGGCCATAAAGTCAATCTTTATTCGTAAAGTTCAATCGTTATAGCTCTGGTCTCTTTGTTTGGGAACTAAGAAAATAAATTTGATCGAACAAATCTGAGAGAAGGAAAAAATGAGTTACTACAACCAGCCACCGCCGCCTCCCGTCGGCGTTCCTCCGCCTCAAGGTATCATCTAAAACCAATTCTCCGATCAGTTTTTCTTCTCTTAATTCCTTTGCATTTTCTTCCATTTCTAAGCTGCTTTTATTTAGGGGTGTACATAGATTAGGTAAATTTTTTAGGTTAGTCTAAAATTTTGGTTTAGATCATTCCTCCAACCCATCCAATTTATATTTTTTGAGTTGAGTTGGATTGGTTTTCGGTTTGTGTTGATCTCCGTTCCTCTTGTAAATATATGTACTTAAATCTCTTTTTTTAGTACATATCGGAGAAGAGAAACAAATATCAATTTTTGAAATCGAACTTTTCACATTGGTGTTGAATTGATTCACAACCAAACAATGAAATCATTGAGTGACTCATTTGGTTATATATACTTGAATCTAGAATATCTATTTTATTCAAAAAAAAAAATTGTATGAAATCTTCTAGTTTGCAAATTCTAAAGTATGGTAGTTAATGAATATCCATTCTTAAAGGATGACATAATGGTTGTAGACTTGCTCTTTCAAGGTCTCAAGTTTAAGATTCAATTGTGACATTACTCTTTTGATGTCTCATGCTTGACCTATGGACGATTATAAATATTCATTATTAACAGTATTATAAGAAATAATATGAGACATAATTATTTTTAGATTTAACTAATTTTCTAAATCTTCAACATGTTATCTATTTTATTAATTAAGATTTGATAATAATTGAAAGCCAACTAAAATTAGAAAATCATAATTTAGAATAATTATACCCCAACTCAAATTTGAGAACTCCAACTGGATTATTAATTCTTTTGTATACTCTTACTTTGGTTTGACCGATTTTCGGCTGCTATTCTGTGATTGGCTACGGTTTTAGGTTATCCTCCGGCAGGTTATCCAAAAGACGCCTATCCGCCGCCAGGATATCCACCGCAGGGCGGTTATCCTCCGCCGCCGGCATATGGTCACCCACCGCCGCCGGTTTATGCTCCGGCGTACGGCCAGCCTCCACATCATCAACAACAAAAGAAACAAGTTGGATTCCTGGAAGGCTGGTAATTTTTGTTTCCTTTCTTCTGCTTCTATTTTATTTTGACCTAGTCTTCATCCGATTTAAATTTAAATATAATGGCGTTTTCAAGTTGAAATTTGTGTACCAAATAGAAATTATACCATAAATCAAGCGACTAAAAATGTATATATATATATATTTTTTTCAATTGGTTTTATTGACCAAAATAGTAGGTCAGGATTATATGGCTTCCAGATGAGCCATATATTAATCGCTAATATGTTTTTACACCCTATTAAGTTCAAATCTATTTAATGAAAATGAATTTGAGATCCAATGTAATAACGCTGAAGGTAAAGAGATACCATCTAAAGGAACATCTTAATAATTCATATTTAAAAAATAGAGAAATCTTAATAATGTTTATAAGATAAGTGAACTGTGTCTCTCATATATGGTCAAGAGGGCTTTTAAGTGGGTGTTTGTTTGACATATTTAGGTAGGATTTATGTTAAAGAGTTATATTGAGTAGTTAAAAATTGAGAGTTGTGTCAAAAACCCGTTTGAATGTAATCTTTGTATAGAGAAGTTAGAGTCAAAGTCTTGTTTGGATGTAAATTTAAAATGAGTAGTTACTTTTAAGAGTTGAAAAAGAAATGATTAAAAATGAATTATTTTGATTGATTTGAAATGAATAATTAAAAATGGGTAGTTATTAAGTAGTTATAAATGAATGATTAAAAATGAGTATTTAGAAATGAGAGTTATTTTTAAAAGTAAAAATGAGGAGGAATTAATAAAAAATATTCGGATGTAGATTTTTTATGAGGAGTTAATAAATCCTACATAAATATGACAAACAAACAGCCTCTAAGGAACTAAGAAGTGATGTATTCGATTCATGTGACCAGCCTAAAAATTAATTTTCAGATTAAACAATAATGTCTCGTGACAATAGTCGAGGTGCATGCAATCTGACCTCGATAATCATAGACATAAAAAAAAAAAAAAATTGAGATGAAACTGATGTTATCAAATAACCTCATAAAATAAGAAATTGTAGTCTACAAGTGTTTTGCAACGAAATGAAATGATGGTTATGTTCGTAAATTTTGTTGTAAATAAAATGGCCTTTTAAGTTTTGTTGTAAAATTTTCAGTTTGGCTGCTCTTTGCTGTTGCTTCGTCTTGGATGCTTGCTTTTAAGGACACAACATACAACATTTATGATATTGATCATATGGCGTATAAAGTTTGTAACTTTATTTTGATTTATATTTGAATTTGATTACGATTTATAATGTCCAATATTTCTTATATCCATATCTTGCCAGTGTGTAACATCCATATATCTTTTTACTCTCATTAGAATATACTATATTTCTCATTATATTTCCTGAACCTTGC AAAAGAAATCCGGCCATAAAGTCAATCTTTATTCGTAAAGTTCAATCGTTATAGCTCTGGTCTCTTTGTTTGGGAACTAAGAAAATAAATTTGATCGAACAAATCTGAGAGAAGGAAAAAATGAGTTACTACAACCAGCCACCGCCGCCTCCCGTCGGCGTTCCTCCGCCTCAAGGTTATCCTCCGGCAGGTTATCCAAAAGACGCCTATCCGCCGCCAGGATATCCACCGCAGGGCGGTTATCCTCCGCCGCCGGCATATGGTCACCCACCGCCGCCGGTTTATGCTCCGGCGTACGGCCAGCCTCCACATCATCAACAACAAAAGAAACAAGTTGGATTCCTGGAAGGCTGTTTGGCTGCTCTTTGCTGTTGCTTCGTCTTGGATGCTTGCTTTTAAGGACACAACATACAACATTTATGATATTGATCATATGGCGTATAAAGTTTGTAACTTTATTTTGATTTATATTTGAATTTGATTACGATTTATAATGTCCAATATTTCTTATATCCATATCTTGCCAGTGTGTAACATCCATATATCTTTTTACTCTCATTAGAATATACTATATTTCTCATTATATTTCCTGAACCTTGC ATGAGTTACTACAACCAGCCACCGCCGCCTCCCGTCGGCGTTCCTCCGCCTCAAGGTTATCCTCCGGCAGGTTATCCAAAAGACGCCTATCCGCCGCCAGGATATCCACCGCAGGGCGGTTATCCTCCGCCGCCGGCATATGGTCACCCACCGCCGCCGGTTTATGCTCCGGCGTACGGCCAGCCTCCACATCATCAACAACAAAAGAAACAAGTTGGATTCCTGGAAGGCTGTTTGGCTGCTCTTTGCTGTTGCTTCGTCTTGGATGCTTGCTTTTAA MSYYNQPPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPPPAYGHPPPPVYAPAYGQPPHHQQQKKQVGFLEGCLAALCCCFVLDACF Homology
BLAST of Sed0014956 vs. NCBI nr
Match: XP_038888465.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida]) HSP 1 Score: 143.7 bits (361), Expect = 8.1e-31 Identity = 77/96 (80.21%), Postives = 81/96 (84.38%), Query Frame = 0
BLAST of Sed0014956 vs. NCBI nr
Match: XP_022148715.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]) HSP 1 Score: 139.8 bits (351), Expect = 1.2e-29 Identity = 77/95 (81.05%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of Sed0014956 vs. NCBI nr
Match: XP_022927665.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata] >XP_022989028.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima] >KAG6588716.1 hypothetical protein SDJN03_17281, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022504.1 hypothetical protein SDJN02_16236 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.0 bits (341), Expect = 1.7e-28 Identity = 74/95 (77.89%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of Sed0014956 vs. NCBI nr
Match: XP_023553865.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 135.6 bits (340), Expect = 2.2e-28 Identity = 76/96 (79.17%), Postives = 79/96 (82.29%), Query Frame = 0
BLAST of Sed0014956 vs. NCBI nr
Match: XP_023529875.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 134.4 bits (337), Expect = 4.9e-28 Identity = 73/95 (76.84%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of Sed0014956 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 4.8e-26 Identity = 70/101 (69.31%), Postives = 73/101 (72.28%), Query Frame = 0
BLAST of Sed0014956 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 8.4e-15 Identity = 54/88 (61.36%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Sed0014956 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2) HSP 1 Score: 77.8 bits (190), Expect = 7.1e-14 Identity = 56/97 (57.73%), Postives = 59/97 (60.82%), Query Frame = 0
BLAST of Sed0014956 vs. ExPASy Swiss-Prot
Match: P31356 (Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2) HSP 1 Score: 47.8 bits (112), Expect = 7.9e-05 Identity = 31/55 (56.36%), Postives = 32/55 (58.18%), Query Frame = 0
BLAST of Sed0014956 vs. ExPASy TrEMBL
Match: A0A6J1D3P4 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica charantia OX=3673 GN=LOC111017311 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.7e-30 Identity = 77/95 (81.05%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of Sed0014956 vs. ExPASy TrEMBL
Match: A0A6J1JP18 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111486213 PE=3 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 8.2e-29 Identity = 74/95 (77.89%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of Sed0014956 vs. ExPASy TrEMBL
Match: A0A6J1EPM1 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111434485 PE=3 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 8.2e-29 Identity = 74/95 (77.89%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of Sed0014956 vs. ExPASy TrEMBL
Match: A0A0A0K2W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070830 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 5.3e-28 Identity = 74/96 (77.08%), Postives = 78/96 (81.25%), Query Frame = 0
BLAST of Sed0014956 vs. ExPASy TrEMBL
Match: A0A6J1I9Y5 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111470998 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.0e-26 Identity = 73/94 (77.66%), Postives = 76/94 (80.85%), Query Frame = 0
BLAST of Sed0014956 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein ) HSP 1 Score: 118.2 bits (295), Expect = 3.4e-27 Identity = 70/101 (69.31%), Postives = 73/101 (72.28%), Query Frame = 0
BLAST of Sed0014956 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 80.9 bits (198), Expect = 6.0e-16 Identity = 54/88 (61.36%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Sed0014956 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 76.3 bits (186), Expect = 1.5e-14 Identity = 58/112 (51.79%), Postives = 66/112 (58.93%), Query Frame = 0
BLAST of Sed0014956 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein ) HSP 1 Score: 49.3 bits (116), Expect = 1.9e-06 Identity = 42/98 (42.86%), Postives = 46/98 (46.94%), Query Frame = 0
BLAST of Sed0014956 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein ) HSP 1 Score: 49.3 bits (116), Expect = 1.9e-06 Identity = 42/98 (42.86%), Postives = 46/98 (46.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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