Sed0014919 (gene) Chayote v1

Overview


Name	Sed0014919
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Transcription factor GTE4
Location	LG04: 30330156 .. 30331721 (-)
RNA-Seq Expression	Sed0014919
Synteny	Sed0014919

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGCCGCCGCTGCTAATGGCGGTGGCAGTCTGTTTTTTCCGTCTCATAATCCGATCGATGTTTTAGTCGCGTCTAGGGATTCTCCAGGTCAAGAACCGGGTTAGGATTAGTTTGGATTCGAGATCGAGGTCTGGGATTAAAGAGCTTACCATGAAGCTGAAGAAGTTTGATGCTCCCGGTTCGAGGCTGGTTCGATGCGTTTCGGTGGCTGAAAACGTTGGGGAGTTTGCTGAGAAAGAGATGAACGAGCATACGAATTCGAAGTATACTCCTACGAAGGAGTTCCCGATGTCGGTTTGCGATTCGAATGGCGGTAAGATTGGTCCAGTGCTTAAAAGCTGTAATAATTTGCTGGAAAAGTTGATGAAACATAAATATGGTTGGGTGTTTAATGTACCTGTTGATGCCAAGCGTTTGGGGCTTCATGATTATCATAAGATCATAAGGAAGGGAAGCCAATGGATTTGGGTACTGTAAAGATGAGATTATATAAGAACTGGTACAAGTCACCAAGAGAGTTTGCTGAGGATGTTAGACTTACATTCAGTAATGCCATTACATATAACCCGAAAGGGGAGGATAAGATATTTGAAGAGAAATGGAGGATTATTGAAGTCAAACAAAATGGTGGTAAGGGATTTCAGAAGGAGCATAGTTCAGTTTTACCTACACCAAATTCCAGAAAATCTCCTGCTCCACCTCTAGCCGAATCGAGATAGAAAACCCCCCAATCCCCAATAGAAACCTACAAATGTTGCTCATCCAGATAGAAAACCAAAAACAATGAATCACAAAAACAGAGATATGACATATGAAGAAAAACAGAAACCGAGCATTGATCTTCAGGAGTTACCATCTGATAAGTTAAATAATGTTGTCAAGATTATCAAGAAGAGGAACCAGGGACACTTCCAAAACGGCGACGACATTGAGTTGGATATGGGTAGTGTTGATTCCGAAACTCTCCGGGAACTTGAGAGGTTTGTGGCAAATTACAAAAAAAGCTTGATCAGGAATAAGAGAAAAGCCGACGACAATCTTCAATCAGGAGAAAAATCATCTCACTACTGGAACGAAGATATGGTAAGATTTGAATTAATCTAGTTACAGTTTCAACTTTCTCATAAAAAAATGATTAGTAGGGTGAAACTATATTGTAATGATGCAGGATCGAACTATGGCTATTGCTGGTGGAGAACCTGTATGTGATAGTGCAGGTAAATTTGTTGGAATCCTTATAACATTTCGAGGATTCTTAAATCTAAGAAATGACTTTTGGTAGTGCAGAAAATAAATAATATAAAAGAAAACATAACAAAACATATCTCCACCATTGAAACAACCATTTGATGATACTCGGTTTTTAGTCAGATGGAGGTTTAGTAGAATCAATTTTCTTAGCATGTGAATCAATTATTGGTTCTAGAGTAGCAGTAACTTAAAATGGTTAAATGATTCAAGAAGAATGTTCTTATTTCTAAAACTTCATCTAGTTACTCTTTTGTTGTTCAGATTCTGAAGGCGAAGGTGATAGTTCCTTGACTCGTGGAGATGCAAAATAA

mRNA sequence

ATGCCTGCCGCCGCTGCTAATGGCGGTGGCAGTCTGTTTTTTCCGTCTCATAATCCGATCGATGTTTTAGTCGCGATTAGTTTGGATTCGAGATCGAGGTCTGGGATTAAAGAGCTTACCATGAAGCTGAAGAAGTTTGATGCTCCCGGTTCGAGGCTGGTTCGATGCGTTTCGGTGGCTGAAAACGTTGGGGAGTTTGCTGAGAAAGAGATGAACGAGCATACGAATTCGAAGTATACTCCTACGAAGGAGTTCCCGATGTCGGTTTGCGATTCGAATGGCGGTAAGATTGGTCCAGTGCTTAAAAGCTGTAATAATTTGCTGGAAAAGTTGATGAAACATAAATATGGTTGGGTGTTTAATGTACCTGTTGATGCCAAGCGGAAGCCAATGGATTTGGGTACTGTAAAGATGAGATTATATAAGAACTGGTACAAGTCACCAAGAGAGTTTGCTGAGGATGTTAGACTTACATTCAGTAATGCCATTACATATAACCCGAAAGGGGAGGATAAGATATTTGAAGAGAAATGGAGGATTATTGAAGTCAAACAAAATGGTGGTAAGGGATTTCAGAAGGAGCATAGTTCAAAACCTACAAATGTTGCTCATCCAGATAGAAAACCAAAAACAATGAATCACAAAAACAGAGATATGACATATGAAGAAAAACAGAAACCGAGCATTGATCTTCAGGAGTTACCATCTGATAAGTTAAATAATGTTGTCAAGATTATCAAGAAGAGGAACCAGGGACACTTCCAAAACGGCGACGACATTGAGTTGGATATGGGTAGTGTTGATTCCGAAACTCTCCGGGAACTTGAGAGGTTTGTGGCAAATTACAAAAAAAGCTTGATCAGGAATAAGAGAAAAGCCGACGACAATCTTCAATCAGGAGAAAAATCATCTCACTACTGGAACGAAGATATGGATCGAACTATGGCTATTGCTGGTGGAGAACCTGTATGTGATAGTGCAGATTCTGAAGGCGAAGGTGATAGTTCCTTGACTCGTGGAGATGCAAAATAA

Coding sequence (CDS)

ATGCCTGCCGCCGCTGCTAATGGCGGTGGCAGTCTGTTTTTTCCGTCTCATAATCCGATCGATGTTTTAGTCGCGATTAGTTTGGATTCGAGATCGAGGTCTGGGATTAAAGAGCTTACCATGAAGCTGAAGAAGTTTGATGCTCCCGGTTCGAGGCTGGTTCGATGCGTTTCGGTGGCTGAAAACGTTGGGGAGTTTGCTGAGAAAGAGATGAACGAGCATACGAATTCGAAGTATACTCCTACGAAGGAGTTCCCGATGTCGGTTTGCGATTCGAATGGCGGTAAGATTGGTCCAGTGCTTAAAAGCTGTAATAATTTGCTGGAAAAGTTGATGAAACATAAATATGGTTGGGTGTTTAATGTACCTGTTGATGCCAAGCGGAAGCCAATGGATTTGGGTACTGTAAAGATGAGATTATATAAGAACTGGTACAAGTCACCAAGAGAGTTTGCTGAGGATGTTAGACTTACATTCAGTAATGCCATTACATATAACCCGAAAGGGGAGGATAAGATATTTGAAGAGAAATGGAGGATTATTGAAGTCAAACAAAATGGTGGTAAGGGATTTCAGAAGGAGCATAGTTCAAAACCTACAAATGTTGCTCATCCAGATAGAAAACCAAAAACAATGAATCACAAAAACAGAGATATGACATATGAAGAAAAACAGAAACCGAGCATTGATCTTCAGGAGTTACCATCTGATAAGTTAAATAATGTTGTCAAGATTATCAAGAAGAGGAACCAGGGACACTTCCAAAACGGCGACGACATTGAGTTGGATATGGGTAGTGTTGATTCCGAAACTCTCCGGGAACTTGAGAGGTTTGTGGCAAATTACAAAAAAAGCTTGATCAGGAATAAGAGAAAAGCCGACGACAATCTTCAATCAGGAGAAAAATCATCTCACTACTGGAACGAAGATATGGATCGAACTATGGCTATTGCTGGTGGAGAACCTGTATGTGATAGTGCAGATTCTGAAGGCGAAGGTGATAGTTCCTTGACTCGTGGAGATGCAAAATAA

Protein sequence

MPAAAANGGGSLFFPSHNPIDVLVAISLDSRSRSGIKELTMKLKKFDAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTPTKEFPMSVCDSNGGKIGPVLKSCNNLLEKLMKHKYGWVFNVPVDAKRKPMDLGTVKMRLYKNWYKSPREFAEDVRLTFSNAITYNPKGEDKIFEEKWRIIEVKQNGGKGFQKEHSSKPTNVAHPDRKPKTMNHKNRDMTYEEKQKPSIDLQELPSDKLNNVVKIIKKRNQGHFQNGDDIELDMGSVDSETLRELERFVANYKKSLIRNKRKADDNLQSGEKSSHYWNEDMDRTMAIAGGEPVCDSADSEGEGDSSLTRGDAK

Homology

[Close]

BLAST of Sed0014919 vs. NCBI nr
Match: XP_004137305.1 (transcription factor GTE3, chloroplastic [Cucumis sativus] >XP_031740267.1 transcription factor GTE3, chloroplastic [Cucumis sativus] >KGN53597.1 hypothetical protein Csa_014534 [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 6.8e-115
Identity = 263/485 (54.23%), Postives = 286/485 (58.97%), Query Frame = 0


Query: 4   AAANGGGSLFFPSHNPIDVLVA------------------------------ISLDSRSR 63
           AA NGG +   PSHNPID LV                               I+L+SRSR
Sbjct: 49  AATNGGANPSSPSHNPIDALVTSRFYSGQNHCSEPVNAEEVPVYTRFENRVRINLNSRSR 108

Query: 64  SGIKELTMKL-----------KKF------------------------------------ 123
            GIKELT KL           KKF                                    
Sbjct: 109 FGIKELTTKLKGELDQVRSLVKKFETQELQLSGYGGDVGHSQSQFSANNLVERVGTVSTM 168

Query: 124 ---------DAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTPTKEFPMSVCDSNGGKI 183
                    D P SRLVRC SVAEN GEFAEKE+++H NSKY  TKE PMS C+ NGGKI
Sbjct: 169 KVNSEVGSADVPASRLVRCASVAENFGEFAEKEVSKHKNSKYASTKELPMSDCNLNGGKI 228

Query: 184 GPVLKSCNNLLEKLMKHKYGWVFNVPVDAKR-----------KPMDLGTVKMRLYKNWYK 243
           GPVLKSC+NLLE+LMKHK+GWVFNVPVDAKR           KPMDLGT+KMRL KNWYK
Sbjct: 229 GPVLKSCSNLLERLMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRLNKNWYK 288

Query: 244 SPREFAEDVRLTFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGFQKEHSS 303
           SPREFAEDVRLTFSNAITYNPKGED          IFEEKW+ IE KQN GKGFQ +  S
Sbjct: 289 SPREFAEDVRLTFSNAITYNPKGEDVHMMAEQLSNIFEEKWKTIEGKQNVGKGFQVDDGS 348

Query: 304 ----------------------------------------KPTNVAHPDRKPKTMNHKNR 342
                                                    PT+VA PD+KPK  NH+ R
Sbjct: 349 VLPTPTSRKSPALATRPVESRTFSRSDSTTKHFLTSNPKQPPTDVAPPDKKPKAKNHEIR 408

[Close]

BLAST of Sed0014919 vs. NCBI nr
Match: KAA0059017.1 (transcription factor GTE4 [Cucumis melo var. makuwa])

HSP 1 Score: 416.4 bits (1069), Expect = 2.4e-112
Identity = 258/485 (53.20%), Postives = 284/485 (58.56%), Query Frame = 0


Query: 4   AAANGGGSLFFPSHNPIDVLVA------------------------------ISLDSRSR 63
           AA NGG +   PSHNPID LV                               I+L+SRSR
Sbjct: 49  AATNGGANPSSPSHNPIDALVTSRFYSGQNHCSEPVNAEEVPVYTRFENRVRINLNSRSR 108

Query: 64  SGIKELTMKL-----------KKF------------------------------------ 123
           SGIKELT KL           KKF                                    
Sbjct: 109 SGIKELTTKLKGELDQVRSLVKKFETQELQLSGYGGDVGHSQSQFSANNLVERVGTVSTI 168

Query: 124 ---------DAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTPTKEFPMSVCDSNGGKI 183
                    D P SRLVRCVSVAEN GEFAEKE+++H  SKY  T+EFPMS C+ NGGKI
Sbjct: 169 KVNSEVGSADVPASRLVRCVSVAENFGEFAEKEVSKHKTSKYASTEEFPMSDCNLNGGKI 228

Query: 184 GPVLKSCNNLLEKLMKHKYGWVFNVPVDAKR-----------KPMDLGTVKMRLYKNWYK 243
           GPVLKSCNNLLE+LMKHK+GWVFNVPVDAKR           KPMDLGT+KMRL KNWYK
Sbjct: 229 GPVLKSCNNLLERLMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRLNKNWYK 288

Query: 244 SPREFAEDVRLTFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGFQKEHSS 303
           S REFAEDVRLTFSNAITYNPKGED         KIFEEKW+ IE KQ  GKGFQ +  S
Sbjct: 289 SSREFAEDVRLTFSNAITYNPKGEDVHIMAEQLSKIFEEKWKAIEGKQIAGKGFQVDDGS 348

Query: 304 ----------------------------------------KPTNVAHPDRKPKTMNHKNR 342
                                                    PT+VA PD+KPK  NH+ R
Sbjct: 349 VLPTPTYRKSPALATRPVESRTFSRSDSTTKHLPTPNPKQTPTDVATPDKKPKAKNHEIR 408

[Close]

BLAST of Sed0014919 vs. NCBI nr
Match: XP_008451707.1 (PREDICTED: transcription factor GTE4 [Cucumis melo] >XP_008451710.1 PREDICTED: transcription factor GTE4 [Cucumis melo] >XP_008451711.1 PREDICTED: transcription factor GTE4 [Cucumis melo] >XP_008451712.1 PREDICTED: transcription factor GTE4 [Cucumis melo] >TYK19568.1 transcription factor GTE4 [Cucumis melo var. makuwa])

HSP 1 Score: 414.5 bits (1064), Expect = 9.2e-112
Identity = 257/485 (52.99%), Postives = 284/485 (58.56%), Query Frame = 0


Query: 4   AAANGGGSLFFPSHNPIDVLVA------------------------------ISLDSRSR 63
           AA NGG +   PSHNPID LV                               I+L+SRSR
Sbjct: 49  AATNGGANPSSPSHNPIDALVTSRFYSGQNHCSEPVNAEEVPVYTRFENRVRINLNSRSR 108

Query: 64  SGIKELTMKL-----------KKF------------------------------------ 123
           SGIKELT KL           KKF                                    
Sbjct: 109 SGIKELTTKLKGELDQVRSLVKKFETQELQLSGYGGDVGHSQSQFSANNLVERVGTVSTI 168

Query: 124 ---------DAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTPTKEFPMSVCDSNGGKI 183
                    D P SRLVRCVSVAEN GEFAEKE+++H  SKY  T+EFPMS C+ NGGKI
Sbjct: 169 KVNSEVGSADVPASRLVRCVSVAENFGEFAEKEVSKHKTSKYASTEEFPMSDCNLNGGKI 228

Query: 184 GPVLKSCNNLLEKLMKHKYGWVFNVPVDAKR-----------KPMDLGTVKMRLYKNWYK 243
           GPVLKSCNNLLE+LMKHK+GWVFNVPVDAKR           KPMDLGT+KMRL KNWYK
Sbjct: 229 GPVLKSCNNLLERLMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRLNKNWYK 288

Query: 244 SPREFAEDVRLTFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGFQKEHSS 303
           S REFAEDVRLTFSNAITYNPKGED         KIFEEKW+ IE KQ  GKGFQ +  S
Sbjct: 289 SSREFAEDVRLTFSNAITYNPKGEDVHIMAEQLSKIFEEKWKAIEGKQIAGKGFQVDDGS 348

Query: 304 ----------------------------------------KPTNVAHPDRKPKTMNHKNR 342
                                                    PT+VA PD+KPK  NH+ R
Sbjct: 349 VLPTPTYRKSPALATRPVESRTFSRSDSTTKHLPTPNPKQTPTDVATPDKKPKAKNHEIR 408

[Close]

BLAST of Sed0014919 vs. NCBI nr
Match: XP_038898491.1 (transcription factor GTE4-like [Benincasa hispida] >XP_038898500.1 transcription factor GTE4-like [Benincasa hispida] >XP_038898508.1 transcription factor GTE4-like [Benincasa hispida] >XP_038898517.1 transcription factor GTE4-like [Benincasa hispida])

HSP 1 Score: 414.1 bits (1063), Expect = 1.2e-111
Identity = 263/501 (52.50%), Postives = 284/501 (56.69%), Query Frame = 0


Query: 2   PAAAANGGGSLFFPSHNPIDVLVA------------------------------ISLDSR 61
           P AA NGGG+ F PSH+ +D LVA                              ISL+SR
Sbjct: 46  PVAATNGGGNPFSPSHDLVDALVASRDSSGQNCCIEPVNAEDVPGYTRFENRVRISLNSR 105

Query: 62  SRSGIKELTMKL-----------KKF---------------------------------- 121
           SRSGIKELT KL           KKF                                  
Sbjct: 106 SRSGIKELTTKLKGELDQVRSLVKKFETQELQLSGYGADVGQSQSQFSANNLVDRVGTGS 165

Query: 122 -----------DAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTPTKEFPMSVCDSNGG 181
                      D P SRLVRCVSVAEN GEFAEKEM+ H NS YT  KEFPMS C+ NGG
Sbjct: 166 TMKVNSEVGSADVPASRLVRCVSVAENFGEFAEKEMSNHKNSNYTSPKEFPMSDCNLNGG 225

Query: 182 KIGPVLKSCNNLLEKLMKHKYGWVFNVPVDAKR-----------KPMDLGTVKMRLYKNW 241
           KIGPVLKSC+ LLE+LMKH++GWVFNVPVDAKR           KPMDLGT+KMRL KNW
Sbjct: 226 KIGPVLKSCSILLERLMKHQFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRLNKNW 285

Query: 242 YKSPREFAEDVRLTFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGFQKEH 301
           YKSPREFAEDVRLTFSNAITYNPKGED         KIFEEKW+IIE KQ  GKGFQ + 
Sbjct: 286 YKSPREFAEDVRLTFSNAITYNPKGEDVHIMAEQLSKIFEEKWKIIEGKQYVGKGFQMDD 345

Query: 302 SS------------------------------------------------------KPTN 342
            S                                                       PT+
Sbjct: 346 GSVLRTPTSRKSPALATPPMESRTFSRSDSTTKPVPSNRGILGKSDSVTKTPNPKQTPTD 405

[Close]

BLAST of Sed0014919 vs. NCBI nr
Match: XP_022142811.1 (transcription factor GTE4-like [Momordica charantia] >XP_022142812.1 transcription factor GTE4-like [Momordica charantia] >XP_022142814.1 transcription factor GTE4-like [Momordica charantia] >XP_022142815.1 transcription factor GTE4-like [Momordica charantia])

HSP 1 Score: 411.0 bits (1055), Expect = 1.0e-110
Identity = 264/494 (53.44%), Postives = 283/494 (57.29%), Query Frame = 0


Query: 4   AAANGGGSLFFPSHNPIDVLVA-----------------------------ISLDSRSRS 63
           AA NGGG    P  +PIDVLV                              ISL+SRSRS
Sbjct: 50  AATNGGGDPSPPPQSPIDVLVTSRNSLGQNRCIEPVNAREPGYTRFENRVRISLNSRSRS 109

Query: 64  GIKELTMKL-----------KKF------------------------------------- 123
           GIKELT KL           KKF                                     
Sbjct: 110 GIKELTTKLKGELDQVRSLVKKFEAQELQISGYGGDVGHSQSQFSANNLVEKAGSTLKVG 169

Query: 124 ------DAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTPTKEFPMSVCDSNGGKIGPV 183
                 D P SRLV+ VSVA N GEFAEKEM    NSK+ P KEF  S CDSNGGKIGP+
Sbjct: 170 SEVGSADVPTSRLVQSVSVAGNFGEFAEKEMRTPKNSKHAPEKEFLPSDCDSNGGKIGPI 229

Query: 184 LKSCNNLLEKLMKHKYGWVFNVPVDAKR-----------KPMDLGTVKMRLYKNWYKSPR 243
           +KSC+NLLEKLMKHK+GWVFNVPVDAKR           K MDLGTVKMRL KNWYKSPR
Sbjct: 230 IKSCSNLLEKLMKHKHGWVFNVPVDAKRLGLHDYHKIITKQMDLGTVKMRLNKNWYKSPR 289

Query: 244 EFAEDVRLTFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGFQKEHSS--- 303
           EFAEDVRLTFSNAITYNPKGED         KIFEEKWRIIE KQN GKG QK+  S   
Sbjct: 290 EFAEDVRLTFSNAITYNPKGEDVHLMAEQLSKIFEEKWRIIEAKQNVGKGLQKDDGSVLP 349

Query: 304 ------------------------------------------------KPTNVA-HPDRK 343
                                                           K  NVA HPD+K
Sbjct: 350 TPTSRKSPALATPPVESRTLESTTKPLPANRGILGKSDSITKPPNAKQKHANVAHHPDKK 409

[Close]

BLAST of Sed0014919 vs. ExPASy Swiss-Prot
Match: Q9LNC4 (Transcription factor GTE4 OS=Arabidopsis thaliana OX=3702 GN=GTE4 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-46
Identity = 138/390 (35.38%), Postives = 183/390 (46.92%), Query Frame = 0


Query: 16  SHNPIDVLVAISLDS---RSRSGIKELTMKLKKFDAPGSRLVRCVSVAEN---VGEFAEK 75
           ++N   VL+   +++   R  SG     +  +   AP       +SV EN   V E  EK
Sbjct: 310 AYNDSRVLINTGINNGGGRILSGFASAGLPREVIRAPRPVNQLSISVLENTQGVNEHVEK 369

Query: 76  EMNEHTNSKYTPTKEFPM--------------SVCDSNGGKIG-------PVLKSCNNLL 135
           E      +++    EF +              S     GG +G        V K+C+ LL
Sbjct: 370 EKRTPKANQFYRNSEFLLGDKLPPAESNKKSKSSSKKQGGDVGHGFGAGTKVFKNCSALL 429

Query: 136 EKLMKHKYGWVFNVPVDAK-----------RKPMDLGTVKMRLYKNWYKSPREFAEDVRL 195
           E+LMKHK+GWVFN PVD K             PMDLGT+K  L KN YKSPREFAEDVRL
Sbjct: 430 ERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSPREFAEDVRL 489

Query: 196 TFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGF----------------- 255
           TF NA+TYNP+G+D         +IFEE+W +IE   N    F                 
Sbjct: 490 TFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNREMRFVTGYEMNLPTPTMRSRL 549

Query: 256 ------------------------------QKEHSSKPTNVAHPDRKPKTMNHKNRDMTY 312
                                         +   S+ P+      +KPK      RDMTY
Sbjct: 550 GPTMPPPPINVRNTIDRADWSNRQPTTTPGRTPTSATPSGRTPALKKPKANEPNKRDMTY 609

[Close]

BLAST of Sed0014919 vs. ExPASy Swiss-Prot
Match: Q9S7T1 (Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GTE3 PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.7e-41
Identity = 134/381 (35.17%), Postives = 179/381 (46.98%), Query Frame = 0


Query: 23  LVAISLDSRSRSGIKELTMKLKKFDAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTPT 82
           ++ ISL S S+  ++ L  KL+             +  E V    ++   +  N    P 
Sbjct: 47  MMKISLSSISKLEVRNLKRKLQ-------------AELEEVRSLIKRLEPQGNNFAPVPN 106

Query: 83  KEFPMSVCDSNGGKIG------------PVLKSCNNLLEKLMKHKYGWVFNVPVDAK--- 142
           K+       +NGGK G             +LKSCNNLL KLMKHK GW+FN PVD     
Sbjct: 107 KKLK----TANGGKKGGVHGAAADKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVTLG 166

Query: 143 --------RKPMDLGTVKMRLYKNWYKSPREFAEDVRLTFSNAITYNPKGED-------- 202
                   ++PMDLGTVK RL K+ YKSP EFAEDVRLTF+NA+ YNP G D        
Sbjct: 167 LHDYHNIIKEPMDLGTVKTRLSKSLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEIL 226

Query: 203 -KIFEEKWRIIEV-------KQNGGKGFQ-------KEHSSK------PTNVAHPDRKPK 262
             +FEEKW  +E        KQ   +            H+ +      PT    P   PK
Sbjct: 227 LNLFEEKWVPLETQYELLIRKQQPVRDIDFHAPVSTNTHNVEALPLPAPTPSLSPPPPPK 286

Query: 263 TMNHK------------------------------NRDMTYEEKQKPSIDLQELPSDKLN 322
            + ++                              NRD+T++EK++ S DLQ+LP DKL 
Sbjct: 287 VVENRTLERAESMTNPVKPAVLPVVPEKLVEEASANRDLTFDEKRQLSEDLQDLPYDKLE 346

[Close]

BLAST of Sed0014919 vs. ExPASy Swiss-Prot
Match: Q8H1D7 (Transcription factor GTE5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GTE5 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.5e-37
Identity = 129/377 (34.22%), Postives = 177/377 (46.95%), Query Frame = 0


Query: 23  LVAISLDSRSRSGIKELTMKLK-KFDAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTP 82
           ++ ISL S S+  ++ L  KLK + D   S + R    A   G  A+  +   +    T 
Sbjct: 55  MLKISLSSISKLEVRNLKRKLKSELDEVRSLIKRFDPEANPGGSMAKSGVVGRSKKVKTG 114

Query: 83  TKEFPMSVCDSNGGKIGPVLKSCNNLLEKLMKHKYGWVFNVPVDAK-----------RKP 142
                 S   ++ G +  + K+CN+LL KLMKHK  WVFNVPVDAK           ++P
Sbjct: 115 NGGGKKSGHGADKGTV-QIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEP 174

Query: 143 MDLGTVKMRLYKNWYKSPREFAEDVRLTFSNAITYNPKGED---------KIFEEKWRII 202
           MDLGTVK +L K+ YKSP +FAEDVRLTF+NAI YNP G D          +FE+KW  I
Sbjct: 175 MDLGTVKTKLGKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSI 234

Query: 203 EVK-QNGGKGFQKEHSSK-------------------------------PTNVAHPDRKP 262
           E++  N  + F+     +                               P  VA P  + 
Sbjct: 235 EMQYDNLHRKFKPTRDIEFPAPAPSIAPIVEPLPAIVPSPSPSSPPPPPPPPVAAPVLEN 294

Query: 263 KTMNHK---------------------------NRDMTYEEKQKPSIDLQELPSDKLNNV 320
           +T   +                           NRD+T EEK++ S +LQ+LP DKL  V
Sbjct: 295 RTWEREESMTIPVEPEAVITAPEKAEEEEAPVNNRDLTLEEKRRLSEELQDLPYDKLETV 354

[Close]

BLAST of Sed0014919 vs. ExPASy Swiss-Prot
Match: Q7Y214 (Transcription factor GTE7 OS=Arabidopsis thaliana OX=3702 GN=GTE7 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.3e-31
Identity = 99/309 (32.04%), Postives = 137/309 (44.34%), Query Frame = 0


Query: 100 VLKSCNNLLEKLMKHKYGWVFNVPVD-----------AKRKPMDLGTVKMRLYKNWYKSP 159
           +L +C+ +L KLMKHK+ WVFN PVD             +KPMDLGTVK+ L K +Y SP
Sbjct: 169 MLNTCSQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSP 228

Query: 160 REFAEDVRLTFSNAITYNPKGEDKIFE----------------EKWRIIEVKQNGGKG-- 219
            +FA DVRLTF NA+TYNPKG+D  F                 +K+   ++K  G     
Sbjct: 229 IDFATDVRLTFDNAMTYNPKGQDVYFMADKLLDHFDGMFNPAFKKFEAQQLKLTGSSSRP 288

Query: 220 --------FQKEHSSKPTNVAHPDR----------------------------------- 279
                    Q++ +  P  VA+P +                                   
Sbjct: 289 EPDFKPDFKQRQWNQNPPMVANPRKGTEQISIAKKLDSVKPPQPTLPPQLVEPSRVQSPS 348

Query: 280 --------------------------------------------KPKTMNHKNRDMTYEE 293
                                                       KPK  +   R MT EE
Sbjct: 349 PPPPPPVIQPELPQPQPPPPQLEIEVEAPPDVSEVSKGRKGKLPKPKAKDPNKRLMTMEE 408

[Close]

BLAST of Sed0014919 vs. ExPASy Swiss-Prot
Match: Q9LXA7 (Transcription factor GTE2 OS=Arabidopsis thaliana OX=3702 GN=GTE2 PE=2 SV=2)

HSP 1 Score: 132.9 bits (333), Expect = 7.0e-30
Identity = 97/299 (32.44%), Postives = 135/299 (45.15%), Query Frame = 0


Query: 100 VLKSCNNLLEKLMKHKYGWVFNVPVDA-----------KRKPMDLGTVKMRLYKNWYKSP 159
           ++ +C  +L KLMKHK+ WVF  PVD              KPMDLGTVKM L K  Y+SP
Sbjct: 174 MMTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSP 233

Query: 160 REFAEDVRLTFSNAITYNPKGED--------------------KIFEEK----------- 219
            +FA DVRLTF+NA++YNPKG+D                    K FE +           
Sbjct: 234 IDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQFDVWFNPTLKRFEAQEVKVMGSSSRP 293

Query: 220 --------WRIIEVKQNGGKG---------------------------FQKEHSSKPTNV 279
                   W    V +N  KG                             ++ S  P+ V
Sbjct: 294 GPEDNQRVWNQNNVAENARKGPEQISIAKKLDSVKPLLPTLPPPPVIEITRDPSPPPSPV 353

Query: 280 AHPD-----------------------------RKPKTMNHKNRDMTYEEKQKPSIDLQE 293
             P                               KPK  +   R+MT +EK K  ++LQE
Sbjct: 354 QPPPPPSPPPQPVNQVEASLEVRETNKGRKGKLPKPKAKDPNKREMTMDEKGKLGVNLQE 413

[Close]

BLAST of Sed0014919 vs. ExPASy TrEMBL
Match: A0A0A0KYZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083710 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 3.3e-115
Identity = 263/485 (54.23%), Postives = 286/485 (58.97%), Query Frame = 0


Query: 4   AAANGGGSLFFPSHNPIDVLVA------------------------------ISLDSRSR 63
           AA NGG +   PSHNPID LV                               I+L+SRSR
Sbjct: 49  AATNGGANPSSPSHNPIDALVTSRFYSGQNHCSEPVNAEEVPVYTRFENRVRINLNSRSR 108

Query: 64  SGIKELTMKL-----------KKF------------------------------------ 123
            GIKELT KL           KKF                                    
Sbjct: 109 FGIKELTTKLKGELDQVRSLVKKFETQELQLSGYGGDVGHSQSQFSANNLVERVGTVSTM 168

Query: 124 ---------DAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTPTKEFPMSVCDSNGGKI 183
                    D P SRLVRC SVAEN GEFAEKE+++H NSKY  TKE PMS C+ NGGKI
Sbjct: 169 KVNSEVGSADVPASRLVRCASVAENFGEFAEKEVSKHKNSKYASTKELPMSDCNLNGGKI 228

Query: 184 GPVLKSCNNLLEKLMKHKYGWVFNVPVDAKR-----------KPMDLGTVKMRLYKNWYK 243
           GPVLKSC+NLLE+LMKHK+GWVFNVPVDAKR           KPMDLGT+KMRL KNWYK
Sbjct: 229 GPVLKSCSNLLERLMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRLNKNWYK 288

Query: 244 SPREFAEDVRLTFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGFQKEHSS 303
           SPREFAEDVRLTFSNAITYNPKGED          IFEEKW+ IE KQN GKGFQ +  S
Sbjct: 289 SPREFAEDVRLTFSNAITYNPKGEDVHMMAEQLSNIFEEKWKTIEGKQNVGKGFQVDDGS 348

Query: 304 ----------------------------------------KPTNVAHPDRKPKTMNHKNR 342
                                                    PT+VA PD+KPK  NH+ R
Sbjct: 349 VLPTPTSRKSPALATRPVESRTFSRSDSTTKHFLTSNPKQPPTDVAPPDKKPKAKNHEIR 408

[Close]

BLAST of Sed0014919 vs. ExPASy TrEMBL
Match: A0A5A7UWC5 (Transcription factor GTE4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00380 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 1.2e-112
Identity = 258/485 (53.20%), Postives = 284/485 (58.56%), Query Frame = 0


Query: 4   AAANGGGSLFFPSHNPIDVLVA------------------------------ISLDSRSR 63
           AA NGG +   PSHNPID LV                               I+L+SRSR
Sbjct: 49  AATNGGANPSSPSHNPIDALVTSRFYSGQNHCSEPVNAEEVPVYTRFENRVRINLNSRSR 108

Query: 64  SGIKELTMKL-----------KKF------------------------------------ 123
           SGIKELT KL           KKF                                    
Sbjct: 109 SGIKELTTKLKGELDQVRSLVKKFETQELQLSGYGGDVGHSQSQFSANNLVERVGTVSTI 168

Query: 124 ---------DAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTPTKEFPMSVCDSNGGKI 183
                    D P SRLVRCVSVAEN GEFAEKE+++H  SKY  T+EFPMS C+ NGGKI
Sbjct: 169 KVNSEVGSADVPASRLVRCVSVAENFGEFAEKEVSKHKTSKYASTEEFPMSDCNLNGGKI 228

Query: 184 GPVLKSCNNLLEKLMKHKYGWVFNVPVDAKR-----------KPMDLGTVKMRLYKNWYK 243
           GPVLKSCNNLLE+LMKHK+GWVFNVPVDAKR           KPMDLGT+KMRL KNWYK
Sbjct: 229 GPVLKSCNNLLERLMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRLNKNWYK 288

Query: 244 SPREFAEDVRLTFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGFQKEHSS 303
           S REFAEDVRLTFSNAITYNPKGED         KIFEEKW+ IE KQ  GKGFQ +  S
Sbjct: 289 SSREFAEDVRLTFSNAITYNPKGEDVHIMAEQLSKIFEEKWKAIEGKQIAGKGFQVDDGS 348

Query: 304 ----------------------------------------KPTNVAHPDRKPKTMNHKNR 342
                                                    PT+VA PD+KPK  NH+ R
Sbjct: 349 VLPTPTYRKSPALATRPVESRTFSRSDSTTKHLPTPNPKQTPTDVATPDKKPKAKNHEIR 408

[Close]

BLAST of Sed0014919 vs. ExPASy TrEMBL
Match: A0A1S3BS38 (transcription factor GTE4 OS=Cucumis melo OX=3656 GN=LOC103492922 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 4.4e-112
Identity = 257/485 (52.99%), Postives = 284/485 (58.56%), Query Frame = 0


Query: 4   AAANGGGSLFFPSHNPIDVLVA------------------------------ISLDSRSR 63
           AA NGG +   PSHNPID LV                               I+L+SRSR
Sbjct: 49  AATNGGANPSSPSHNPIDALVTSRFYSGQNHCSEPVNAEEVPVYTRFENRVRINLNSRSR 108

Query: 64  SGIKELTMKL-----------KKF------------------------------------ 123
           SGIKELT KL           KKF                                    
Sbjct: 109 SGIKELTTKLKGELDQVRSLVKKFETQELQLSGYGGDVGHSQSQFSANNLVERVGTVSTI 168

Query: 124 ---------DAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTPTKEFPMSVCDSNGGKI 183
                    D P SRLVRCVSVAEN GEFAEKE+++H  SKY  T+EFPMS C+ NGGKI
Sbjct: 169 KVNSEVGSADVPASRLVRCVSVAENFGEFAEKEVSKHKTSKYASTEEFPMSDCNLNGGKI 228

Query: 184 GPVLKSCNNLLEKLMKHKYGWVFNVPVDAKR-----------KPMDLGTVKMRLYKNWYK 243
           GPVLKSCNNLLE+LMKHK+GWVFNVPVDAKR           KPMDLGT+KMRL KNWYK
Sbjct: 229 GPVLKSCNNLLERLMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRLNKNWYK 288

Query: 244 SPREFAEDVRLTFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGFQKEHSS 303
           S REFAEDVRLTFSNAITYNPKGED         KIFEEKW+ IE KQ  GKGFQ +  S
Sbjct: 289 SSREFAEDVRLTFSNAITYNPKGEDVHIMAEQLSKIFEEKWKAIEGKQIAGKGFQVDDGS 348

Query: 304 ----------------------------------------KPTNVAHPDRKPKTMNHKNR 342
                                                    PT+VA PD+KPK  NH+ R
Sbjct: 349 VLPTPTYRKSPALATRPVESRTFSRSDSTTKHLPTPNPKQTPTDVATPDKKPKAKNHEIR 408

[Close]

BLAST of Sed0014919 vs. ExPASy TrEMBL
Match: A0A5D3D7M3 (Transcription factor GTE4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00730 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 4.4e-112
Identity = 257/485 (52.99%), Postives = 284/485 (58.56%), Query Frame = 0


Query: 4   AAANGGGSLFFPSHNPIDVLVA------------------------------ISLDSRSR 63
           AA NGG +   PSHNPID LV                               I+L+SRSR
Sbjct: 49  AATNGGANPSSPSHNPIDALVTSRFYSGQNHCSEPVNAEEVPVYTRFENRVRINLNSRSR 108

Query: 64  SGIKELTMKL-----------KKF------------------------------------ 123
           SGIKELT KL           KKF                                    
Sbjct: 109 SGIKELTTKLKGELDQVRSLVKKFETQELQLSGYGGDVGHSQSQFSANNLVERVGTVSTI 168

Query: 124 ---------DAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTPTKEFPMSVCDSNGGKI 183
                    D P SRLVRCVSVAEN GEFAEKE+++H  SKY  T+EFPMS C+ NGGKI
Sbjct: 169 KVNSEVGSADVPASRLVRCVSVAENFGEFAEKEVSKHKTSKYASTEEFPMSDCNLNGGKI 228

Query: 184 GPVLKSCNNLLEKLMKHKYGWVFNVPVDAKR-----------KPMDLGTVKMRLYKNWYK 243
           GPVLKSCNNLLE+LMKHK+GWVFNVPVDAKR           KPMDLGT+KMRL KNWYK
Sbjct: 229 GPVLKSCNNLLERLMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRLNKNWYK 288

Query: 244 SPREFAEDVRLTFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGFQKEHSS 303
           S REFAEDVRLTFSNAITYNPKGED         KIFEEKW+ IE KQ  GKGFQ +  S
Sbjct: 289 SSREFAEDVRLTFSNAITYNPKGEDVHIMAEQLSKIFEEKWKAIEGKQIAGKGFQVDDGS 348

Query: 304 ----------------------------------------KPTNVAHPDRKPKTMNHKNR 342
                                                    PT+VA PD+KPK  NH+ R
Sbjct: 349 VLPTPTYRKSPALATRPVESRTFSRSDSTTKHLPTPNPKQTPTDVATPDKKPKAKNHEIR 408

[Close]

BLAST of Sed0014919 vs. ExPASy TrEMBL
Match: A0A6J1CMK3 (transcription factor GTE4-like OS=Momordica charantia OX=3673 GN=LOC111012844 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 4.9e-111
Identity = 264/494 (53.44%), Postives = 283/494 (57.29%), Query Frame = 0


Query: 4   AAANGGGSLFFPSHNPIDVLVA-----------------------------ISLDSRSRS 63
           AA NGGG    P  +PIDVLV                              ISL+SRSRS
Sbjct: 50  AATNGGGDPSPPPQSPIDVLVTSRNSLGQNRCIEPVNAREPGYTRFENRVRISLNSRSRS 109

Query: 64  GIKELTMKL-----------KKF------------------------------------- 123
           GIKELT KL           KKF                                     
Sbjct: 110 GIKELTTKLKGELDQVRSLVKKFEAQELQISGYGGDVGHSQSQFSANNLVEKAGSTLKVG 169

Query: 124 ------DAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTPTKEFPMSVCDSNGGKIGPV 183
                 D P SRLV+ VSVA N GEFAEKEM    NSK+ P KEF  S CDSNGGKIGP+
Sbjct: 170 SEVGSADVPTSRLVQSVSVAGNFGEFAEKEMRTPKNSKHAPEKEFLPSDCDSNGGKIGPI 229

Query: 184 LKSCNNLLEKLMKHKYGWVFNVPVDAKR-----------KPMDLGTVKMRLYKNWYKSPR 243
           +KSC+NLLEKLMKHK+GWVFNVPVDAKR           K MDLGTVKMRL KNWYKSPR
Sbjct: 230 IKSCSNLLEKLMKHKHGWVFNVPVDAKRLGLHDYHKIITKQMDLGTVKMRLNKNWYKSPR 289

Query: 244 EFAEDVRLTFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGFQKEHSS--- 303
           EFAEDVRLTFSNAITYNPKGED         KIFEEKWRIIE KQN GKG QK+  S   
Sbjct: 290 EFAEDVRLTFSNAITYNPKGEDVHLMAEQLSKIFEEKWRIIEAKQNVGKGLQKDDGSVLP 349

Query: 304 ------------------------------------------------KPTNVA-HPDRK 343
                                                           K  NVA HPD+K
Sbjct: 350 TPTSRKSPALATPPVESRTLESTTKPLPANRGILGKSDSITKPPNAKQKHANVAHHPDKK 409

[Close]

BLAST of Sed0014919 vs. TAIR 10
Match: AT1G06230.1 (global transcription factor group E4 )

HSP 1 Score: 188.7 bits (478), Expect = 7.6e-48
Identity = 138/390 (35.38%), Postives = 183/390 (46.92%), Query Frame = 0


Query: 16  SHNPIDVLVAISLDS---RSRSGIKELTMKLKKFDAPGSRLVRCVSVAEN---VGEFAEK 75
           ++N   VL+   +++   R  SG     +  +   AP       +SV EN   V E  EK
Sbjct: 310 AYNDSRVLINTGINNGGGRILSGFASAGLPREVIRAPRPVNQLSISVLENTQGVNEHVEK 369

Query: 76  EMNEHTNSKYTPTKEFPM--------------SVCDSNGGKIG-------PVLKSCNNLL 135
           E      +++    EF +              S     GG +G        V K+C+ LL
Sbjct: 370 EKRTPKANQFYRNSEFLLGDKLPPAESNKKSKSSSKKQGGDVGHGFGAGTKVFKNCSALL 429

Query: 136 EKLMKHKYGWVFNVPVDAK-----------RKPMDLGTVKMRLYKNWYKSPREFAEDVRL 195
           E+LMKHK+GWVFN PVD K             PMDLGT+K  L KN YKSPREFAEDVRL
Sbjct: 430 ERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSPREFAEDVRL 489

Query: 196 TFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGF----------------- 255
           TF NA+TYNP+G+D         +IFEE+W +IE   N    F                 
Sbjct: 490 TFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNREMRFVTGYEMNLPTPTMRSRL 549

Query: 256 ------------------------------QKEHSSKPTNVAHPDRKPKTMNHKNRDMTY 312
                                         +   S+ P+      +KPK      RDMTY
Sbjct: 550 GPTMPPPPINVRNTIDRADWSNRQPTTTPGRTPTSATPSGRTPALKKPKANEPNKRDMTY 609

[Close]

BLAST of Sed0014919 vs. TAIR 10
Match: AT1G06230.2 (global transcription factor group E4 )

HSP 1 Score: 188.7 bits (478), Expect = 7.6e-48
Identity = 138/390 (35.38%), Postives = 183/390 (46.92%), Query Frame = 0


Query: 16  SHNPIDVLVAISLDS---RSRSGIKELTMKLKKFDAPGSRLVRCVSVAEN---VGEFAEK 75
           ++N   VL+   +++   R  SG     +  +   AP       +SV EN   V E  EK
Sbjct: 310 AYNDSRVLINTGINNGGGRILSGFASAGLPREVIRAPRPVNQLSISVLENTQGVNEHVEK 369

Query: 76  EMNEHTNSKYTPTKEFPM--------------SVCDSNGGKIG-------PVLKSCNNLL 135
           E      +++    EF +              S     GG +G        V K+C+ LL
Sbjct: 370 EKRTPKANQFYRNSEFLLGDKLPPAESNKKSKSSSKKQGGDVGHGFGAGTKVFKNCSALL 429

Query: 136 EKLMKHKYGWVFNVPVDAK-----------RKPMDLGTVKMRLYKNWYKSPREFAEDVRL 195
           E+LMKHK+GWVFN PVD K             PMDLGT+K  L KN YKSPREFAEDVRL
Sbjct: 430 ERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSPREFAEDVRL 489

Query: 196 TFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGF----------------- 255
           TF NA+TYNP+G+D         +IFEE+W +IE   N    F                 
Sbjct: 490 TFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNREMRFVTGYEMNLPTPTMRSRL 549

Query: 256 ------------------------------QKEHSSKPTNVAHPDRKPKTMNHKNRDMTY 312
                                         +   S+ P+      +KPK      RDMTY
Sbjct: 550 GPTMPPPPINVRNTIDRADWSNRQPTTTPGRTPTSATPSGRTPALKKPKANEPNKRDMTY 609

[Close]

BLAST of Sed0014919 vs. TAIR 10
Match: AT1G06230.3 (global transcription factor group E4 )

HSP 1 Score: 188.7 bits (478), Expect = 7.6e-48
Identity = 138/390 (35.38%), Postives = 183/390 (46.92%), Query Frame = 0


Query: 16  SHNPIDVLVAISLDS---RSRSGIKELTMKLKKFDAPGSRLVRCVSVAEN---VGEFAEK 75
           ++N   VL+   +++   R  SG     +  +   AP       +SV EN   V E  EK
Sbjct: 310 AYNDSRVLINTGINNGGGRILSGFASAGLPREVIRAPRPVNQLSISVLENTQGVNEHVEK 369

Query: 76  EMNEHTNSKYTPTKEFPM--------------SVCDSNGGKIG-------PVLKSCNNLL 135
           E      +++    EF +              S     GG +G        V K+C+ LL
Sbjct: 370 EKRTPKANQFYRNSEFLLGDKLPPAESNKKSKSSSKKQGGDVGHGFGAGTKVFKNCSALL 429

Query: 136 EKLMKHKYGWVFNVPVDAK-----------RKPMDLGTVKMRLYKNWYKSPREFAEDVRL 195
           E+LMKHK+GWVFN PVD K             PMDLGT+K  L KN YKSPREFAEDVRL
Sbjct: 430 ERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSPREFAEDVRL 489

Query: 196 TFSNAITYNPKGED---------KIFEEKWRIIEVKQNGGKGF----------------- 255
           TF NA+TYNP+G+D         +IFEE+W +IE   N    F                 
Sbjct: 490 TFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNREMRFVTGYEMNLPTPTMRSRL 549

Query: 256 ------------------------------QKEHSSKPTNVAHPDRKPKTMNHKNRDMTY 312
                                         +   S+ P+      +KPK      RDMTY
Sbjct: 550 GPTMPPPPINVRNTIDRADWSNRQPTTTPGRTPTSATPSGRTPALKKPKANEPNKRDMTY 609

[Close]

BLAST of Sed0014919 vs. TAIR 10
Match: AT1G73150.1 (global transcription factor group E3 )

HSP 1 Score: 169.5 bits (428), Expect = 4.8e-42
Identity = 134/381 (35.17%), Postives = 179/381 (46.98%), Query Frame = 0


Query: 23  LVAISLDSRSRSGIKELTMKLKKFDAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTPT 82
           ++ ISL S S+  ++ L  KL+             +  E V    ++   +  N    P 
Sbjct: 47  MMKISLSSISKLEVRNLKRKLQ-------------AELEEVRSLIKRLEPQGNNFAPVPN 106

Query: 83  KEFPMSVCDSNGGKIG------------PVLKSCNNLLEKLMKHKYGWVFNVPVDAK--- 142
           K+       +NGGK G             +LKSCNNLL KLMKHK GW+FN PVD     
Sbjct: 107 KKLK----TANGGKKGGVHGAAADKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVTLG 166

Query: 143 --------RKPMDLGTVKMRLYKNWYKSPREFAEDVRLTFSNAITYNPKGED-------- 202
                   ++PMDLGTVK RL K+ YKSP EFAEDVRLTF+NA+ YNP G D        
Sbjct: 167 LHDYHNIIKEPMDLGTVKTRLSKSLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEIL 226

Query: 203 -KIFEEKWRIIEV-------KQNGGKGFQ-------KEHSSK------PTNVAHPDRKPK 262
             +FEEKW  +E        KQ   +            H+ +      PT    P   PK
Sbjct: 227 LNLFEEKWVPLETQYELLIRKQQPVRDIDFHAPVSTNTHNVEALPLPAPTPSLSPPPPPK 286

Query: 263 TMNHK------------------------------NRDMTYEEKQKPSIDLQELPSDKLN 322
            + ++                              NRD+T++EK++ S DLQ+LP DKL 
Sbjct: 287 VVENRTLERAESMTNPVKPAVLPVVPEKLVEEASANRDLTFDEKRQLSEDLQDLPYDKLE 346

[Close]

BLAST of Sed0014919 vs. TAIR 10
Match: AT1G17790.1 (DNA-binding bromodomain-containing protein )

HSP 1 Score: 157.1 bits (396), Expect = 2.5e-38
Identity = 129/377 (34.22%), Postives = 177/377 (46.95%), Query Frame = 0


Query: 23  LVAISLDSRSRSGIKELTMKLK-KFDAPGSRLVRCVSVAENVGEFAEKEMNEHTNSKYTP 82
           ++ ISL S S+  ++ L  KLK + D   S + R    A   G  A+  +   +    T 
Sbjct: 55  MLKISLSSISKLEVRNLKRKLKSELDEVRSLIKRFDPEANPGGSMAKSGVVGRSKKVKTG 114

Query: 83  TKEFPMSVCDSNGGKIGPVLKSCNNLLEKLMKHKYGWVFNVPVDAK-----------RKP 142
                 S   ++ G +  + K+CN+LL KLMKHK  WVFNVPVDAK           ++P
Sbjct: 115 NGGGKKSGHGADKGTV-QIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEP 174

Query: 143 MDLGTVKMRLYKNWYKSPREFAEDVRLTFSNAITYNPKGED---------KIFEEKWRII 202
           MDLGTVK +L K+ YKSP +FAEDVRLTF+NAI YNP G D          +FE+KW  I
Sbjct: 175 MDLGTVKTKLGKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSI 234

Query: 203 EVK-QNGGKGFQKEHSSK-------------------------------PTNVAHPDRKP 262
           E++  N  + F+     +                               P  VA P  + 
Sbjct: 235 EMQYDNLHRKFKPTRDIEFPAPAPSIAPIVEPLPAIVPSPSPSSPPPPPPPPVAAPVLEN 294

Query: 263 KTMNHK---------------------------NRDMTYEEKQKPSIDLQELPSDKLNNV 320
           +T   +                           NRD+T EEK++ S +LQ+LP DKL  V
Sbjct: 295 RTWEREESMTIPVEPEAVITAPEKAEEEEAPVNNRDLTLEEKRRLSEELQDLPYDKLETV 354

The following BLAST results are available for this feature:

BLAST of Sed0014919 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137305.1	6.8e-115	54.23	transcription factor GTE3, chloroplastic [Cucumis sativus] >XP_031740267.1 trans...	[more]
KAA0059017.1	2.4e-112	53.20	transcription factor GTE4 [Cucumis melo var. makuwa]	[more]
XP_008451707.1	9.2e-112	52.99	PREDICTED: transcription factor GTE4 [Cucumis melo] >XP_008451710.1 PREDICTED: t...	[more]
XP_038898491.1	1.2e-111	52.50	transcription factor GTE4-like [Benincasa hispida] >XP_038898500.1 transcription...	[more]
XP_022142811.1	1.0e-110	53.44	transcription factor GTE4-like [Momordica charantia] >XP_022142812.1 transcripti...	[more]

BLAST of Sed0014919 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNC4	1.1e-46	35.38	Transcription factor GTE4 OS=Arabidopsis thaliana OX=3702 GN=GTE4 PE=2 SV=1	[more]
Q9S7T1	6.7e-41	35.17	Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GTE3...	[more]
Q8H1D7	3.5e-37	34.22	Transcription factor GTE5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GTE5...	[more]
Q7Y214	6.3e-31	32.04	Transcription factor GTE7 OS=Arabidopsis thaliana OX=3702 GN=GTE7 PE=2 SV=1	[more]
Q9LXA7	7.0e-30	32.44	Transcription factor GTE2 OS=Arabidopsis thaliana OX=3702 GN=GTE2 PE=2 SV=2	[more]

BLAST of Sed0014919 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYZ1	3.3e-115	54.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083710 PE=4 SV=1	[more]
A0A5A7UWC5	1.2e-112	53.20	Transcription factor GTE4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3BS38	4.4e-112	52.99	transcription factor GTE4 OS=Cucumis melo OX=3656 GN=LOC103492922 PE=4 SV=1	[more]
A0A5D3D7M3	4.4e-112	52.99	Transcription factor GTE4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1CMK3	4.9e-111	53.44	transcription factor GTE4-like OS=Momordica charantia OX=3673 GN=LOC111012844 PE...	[more]

BLAST of Sed0014919 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06230.1	7.6e-48	35.38	global transcription factor group E4	[more]
AT1G06230.2	7.6e-48	35.38	global transcription factor group E4	[more]
AT1G06230.3	7.6e-48	35.38	global transcription factor group E4	[more]
AT1G73150.1	4.8e-42	35.17	global transcription factor group E3	[more]
AT1G17790.1	2.5e-38	34.22	DNA-binding bromodomain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001487	Bromodomain	PRINTS	PR00503	BROMODOMAIN	coord: 136..154 score: 29.06 coord: 154..173 score: 40.65 coord: 115..128 score: 33.39
IPR001487	Bromodomain	SMART	SM00297	bromo_6	coord: 93..183 e-value: 3.6E-12 score: 56.4
IPR001487	Bromodomain	PFAM	PF00439	Bromodomain	coord: 104..171 e-value: 3.5E-11 score: 43.0
IPR001487	Bromodomain	PROSITE	PS50014	BROMODOMAIN_2	coord: 128..173 score: 12.14
IPR027353	NET domain	PFAM	PF17035	BET	coord: 219..280 e-value: 3.9E-20 score: 71.8
IPR027353	NET domain	PROSITE	PS51525	NET	coord: 209..290 score: 17.919191
IPR036427	Bromodomain-like superfamily	GENE3D	1.20.920.10		coord: 89..195 e-value: 4.1E-22 score: 80.4
IPR036427	Bromodomain-like superfamily	SUPERFAMILY	47370	Bromodomain	coord: 91..171
IPR038336	NET domain superfamily	GENE3D	1.20.1270.220		coord: 213..290 e-value: 6.9E-22 score: 79.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..214
None	No IPR available	PANTHER	PTHR45926:SF26	TRANSCRIPTION FACTOR GTE4-LIKE ISOFORM X1	coord: 191..341
None	No IPR available	PANTHER	PTHR45926:SF26	TRANSCRIPTION FACTOR GTE4-LIKE ISOFORM X1	coord: 57..191
None	No IPR available	PANTHER	PTHR45926	OSJNBA0053K19.4 PROTEIN	coord: 191..341
None	No IPR available	PANTHER	PTHR45926	OSJNBA0053K19.4 PROTEIN	coord: 57..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014919.1	Sed0014919.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding