Sed0014771 (gene) Chayote v1

Overview


Name	Sed0014771
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transmembrane protein 87B-like
Location	LG04: 3814395 .. 3819120 (-)
RNA-Seq Expression	Sed0014771
Synteny	Sed0014771

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTCGCAAAACAAAGATCTGTTGCTGTTTCAAATCCTTCATTCATTTTGTGTGCTTGGTTCGTACGCTCACTCTCACTGAATGTGCCCAATGCCTCCATCCATTTCTACGACGATGAAGTTTTCGTCGACGTCGGAAATGCTTTCCTTCTCTCCGGCGGCAGTGAAGCTCTGGCGGCTTCTCTCCGCTATGCCCAGTACTCTTCCTATAACTCTTTCCATGCCCTCATTTCCATTGCCTTTGCTTCAACTAAACTGTATTTACACTGATTTTGTTGTATTGCGGTTCATGAAGTTGCATATTTACGCCCGTCTGATAATCATTTTGTTTTTTTATAATAATTTTTTTTTTCTTATTTCAATAATTACATCTTATCTATATTTTAAGAAACAAAATCAAAATTTGAAAAAAAAAAAAAAAAATTCCAAAAGCTTGTTTTTGTTTTTGAAATTTGGCTAGTATTTACCTACTTTTTAAAGGAAAGATGAGTACATAATAAAAAAAATTTAAAATAGAAATAGACTTAAATTTCATAAACAAAAAACCAAATAGTTATCAAACGGGGCTTAAAGATTAAAATAATTAAGTATAACTTATTGAATAGTTCTATGTAAATACTAACCCAAATTAGATAACGATTTTGTTTTTGTTTTGATATTTAACTACATTTTATCGTTGTTTTTAAAAATAGAACCAAAATTTGGGCTTGTTTTGTTTTTTAAAATTGGATTAGTATTCACATTACTTTCTAAAAAAAAAAACTATAAGTCCACTCTAAAAAATTTGAATAAAATAAATTTAAAAAAATTAAAAATTAAAAATTAAAAGTTCCATTTGTAATCATTAAAAGACCCTCGGTATCGGATATGAACTGGCCTGTTGTTGTCAATGTGCAATTCAATGATAACTAAATGCACACTAGAATGGAAGATTTGGAAATTCCCATTACAAAAACTGGAATGTATAACTTTTTCTTTGTTACATGCGATCCAAACCTCAAAGGATTAGTGATGCAAGGAGAAAGTGGAAAAATCCCTATGGTTATCTACCCGGACGGATGTTCTCTTTTTTGGACCAACCCAACTTTTCGGGTTGGTCAGTTCGCCAACCCGTTCAACTCTATGCATAAGCACAACCCAACTCAAAATTTTTAGGTTGGATTGTGTTGGGTTCTCAGGTTATGTTATTCTTATTTTTCTATCTAAAGTTTAGTTCATATATTTATAAATATGTTAAAAAAGATTGATGATACTATATTTTAACCTATTATCAATCTTATTAATGTTATAATCTTTTTTTTAGAAGTCTTACAACTATGCTAAAAATCTACCTTATTAATTTATATTATATATATATATATATAATATATATTCTTAGTTTGGGTTGGGTTGAACGAGCTCAACCTAAGAAACCAACCCAACCCAACAAAAACTATAAAATCATAATCCAACTCAATCCAAAAAAGTTATAACCCACGATTTGGGTTGGGTAGTCCAAGTTACTTGGGTTTGCCAGATTTTTTTACACCCCTATTCATTTGTCCCTTGCATATTTATTTCTTATTGTCATTTGGTTATCCCAGTATCTGAGGTTCTGGAGAGATATTCTGCAGCTTCAGCATTGCATCACAGTCGTCATTGCCCTCGGCTTATTTGAGATGGTCCTTTGGTACTTCGAGTATGTAAACTTCAACGATACAGGAATTAGGCCAGTTGTGATCACAACATGGACATAGGGGAGCTTTGCTCCAATTTTATGTATTCATGTCCACGGATATAGAGGAGCGAATCTCTAATTTTATGTATTCACACTATTACAAAAGTCACTTATAATGACTATAATTTTTAGTCATAAACAGGTTACATGACTAAAAATAAGAGTCATTGTATCCGGTGTCATGGTAGGTTCAACCATGACATTTCCTTACCGTACTTCGAGTATGTAATCACAACATGGGTGCTAACTGTTGGTGCTGTAAGGAAAACAATTACACAGCCACGGGTTACGGTGCTGTGCGGCCCACTCTTGGCGGTCTTACCTCAAAGGTTCTTCTTCTGGGGGGTAACATACTTTTTGGCATCCTGAGTTATTGGATATTACAGAGTATGTTGGGACTATAAATGACGTTTCTGGACTATAAATAACTATAAATGGCTATATATATACATATATTAATTTTTGAAAATTCATCTAATGGTTAATGACTTTAAAAATTCATCTAAACCCTAATAAATAAATAAAAACTTTCACAGTCTTGGTTAAATTTTAATTTTTTTTTTGGATAATCACGAGAGAGAACTGTTACTATAGCACTATAAGTATAAATAAATTTATAACACGATTTCAAAAAAAGAAAAAATATATATAACACAGAATGAGATAAATTCTGATTTTAGAATTTGACTGAGAAAGTCTTTTAAATTACATTAAAAAAATAAGGAAAATAATTATCAATTTCAGATCATTTTAATGTTTTTTAAATTGAAATGTATTATCAAATCATATATCATGTATTGTACTCAATTTTTGTTGGCCAAAATTACCATGTATATGCGTGTTACAAGTATTTTCATGAAAAAATCATTCTTAAAAAAAGATAAATTTTCAACCTTATAATTTCAAAAATATTTAAGAGTTATCTTAATAAAAAAAAAGTACCTCTTTGTTCCAATTTCAAAATTTTCAAATGGTTGTTAATTTAAAAAAAAAGGTTCATAAATTTTCAAATGGTTATTTACACTTCATTTCAATTTAAAAAGTTTCAGAATTATTAAATAAAATCCAAAATTTGTGAAATGATGTTTTTAAATCATGTATTTTTTAGACATTAACGCAATTATAATAATGATGTATGTTATAACTTTTAAATTAAAAAAAATAAAATAATGATATATATTTATTTTACAACAAAAAAATTGTATACAAAATATATTACATTTAACATTATGCACCATACAAGATATAATGAATGAAGTATATAACTGATTTCAATATATATAACATAAATAATAATTTCAATGCATTTGTAAATTTATATTTTGAAATTAAATAAAATGTTTGAAAATTATAATCAAAGAGTGTTTGGAAAAATAAGATAGAAAATAGAAAGGGCTTATGTTGAGTTTCATGAGAGTTAAAGTAAGTTTATTTAACACTCCCACCAAATTAGGGTTTTGAATTTTTTTTTTTTTTTTGTCCAAATTACGGTTATTGTCTAGGTTAAATTAAATCTCTGCTATCAAACACTAACTTAGCTCAACTTAAAATGATATATATTTAATAATCAAATTATAAATTCACATCCTCCTGTTTTACCCCTCGTTGACTTTTATGAAAATAACTGTATCCTAAAACGACAAAGTCTTTTTATTTGGGAATTGTCTCAAACATTAGGCTCTTCTCCCCATGATTTTTGTTTTGTTTTTTTTTTAGAAAATGTAAGCAAAATTGTAGGTGGCTTACAATCCTTCCTTTGGAGCCAATATCAATTCTTTGGTGGCTCACAAACTTTACATGAAAGATATTATTGTTTTCAAATAAGACGAGACTCATAACTGTGAAATTAAATTGTATTACAATCCATCACCAAGCTAACACCACTAACCTTTTTTGTGGTAAAAGCGTAAGCAATTGATCTATAATCTTTATTTTACAATTTAATGGATGCATTAGTTTTATTGATAATAAATTGGTGTAAATGTGTTTTTCTAAATGAAGTGGTTTTTATAATTCTCATATATGAGTCCTTTAGATTCCCTACCCATTGTAACTTGCATAATTTTAATCATCAACTATTAGTACTATTTAAAAAATATTAGATCAAAGTAAATGTAAATAGTTAAAAACAAAAAATATATTGTTATATATGAATTTAGAATCACAGACTTATTTATATTTTTTTCAAAATAATGGAGTATTTATGTTTTCTTCGTTACCGTTGAGGTGTTTGATTTCATTTGATCTTAATACTCTTTAAACTGCCAAAATAAACAGTTCAACAAACTTCTTGTATTAAAGATTTCGGTGTTAAGAGTTCGATTTGCCCCACTCTATGTATTGTAAAAAAAATACTTATTAAACTTAATATTTGTTTAACTATGTGTGAAATAGTGTGGACGTCCATCTCAAAATCAATTGGTGATGAGAGGAGTAGTCCACGTACCTTTTAAACACTTAGAAATATCCTTCAAGATGGTGTCTCTTTTGGGCTCACCAATCTTGAATTGGATCTCAATTTCATTTTTATTGGACCGAATACCCGTTTGGGCTTAATGAGCTCTGATACCATGTGAAATAGTATGGACGTCCATCTCAAAACCAATTGAGGATGAGAGGAGTAGTTCATCTACCTTTTAAACACTTAGAAATATCATCTTCTTATCAATGTGGGATTCTCAACACTATGTAAGCATCAAAGTCTTAGTAACATCACTTCGATGGATAGTTTATATATATATATATATATATGGTCTAAGTACTTTTTTATTAATATAAATTTCAAGTGGAGACAAAATGTATTCCCATTCAAATTTTCGACAACAAATAAATAAAATAATTTAGGCGGAAATGAAATAATTATAGACTTTCACACCTTCCATTTCTTTTTTCATATTTTATAATTATGGTAAATGAACTGAGTATAGAAATGCATAGTGGAAGTCATTGATACATGAGAATGTAGAGCAAAATTATATTGAAAAAGATAATGGTGGAAGCACATAG

mRNA sequence

ATGAATGTCGCAAAACAAAGATCTGTTGCTGTTTCAAATCCTTCATTCATTTTGTGTGCTTGGTTCGTACGCTCACTCTCACTGAATGTGCCCAATGCCTCCATCCATTTCTACGACGATGAAGTTTTCGTCGACGTCGGAAATGCTTTCCTTCTCTCCGGCGGCAGTGAAGCTCTGGCGGCTTCTCTCCTTCCATTTGTAATCATTAAAAGACCCTCGGTATCGGATATGAACTGGCCTGTTGTTGTCAATGTAATGGAAGATTTGGAAATTCCCATTACAAAAACTGGAATGTATAACTTTTTCTTTGTTACATGCGATCCAAACCTCAAAGGATTAGTGATGCAAGGAGAAAGTGGAAAAATCCCTATGTTACTTGGGTTTGCCAGATTTTTTTACACCCCTATTCATTTGTCCCTTGCATATTTATTTCTTATTGTCATTTGGTTATCCCAGTATCTGAGGTTCTGGAGAGATATTCTGCAGCTTCAGCATTGCATCACAGTCGTCATTGCCCTCGGCTTATTTGAGATGGTCCTTTGGTACTTCGAGTATGTAAACTTCAACGATACAGGAATTAGGCCATATGTAATCACAACATGGGTGCTAACTGTTGGTGCTGTAAGGAAAACAATTACACAGCCACGGGTTACGGTGCTGTGCGGCCCACTCTTGGCGTTATTGGATATTACAGAGTATGTTGGGACTATAAATGACTCATTGATACATGAGAATGTAGAGCAAAATTATATTGAAAAAGATAATGGTGGAAGCACATAG

Coding sequence (CDS)

ATGAATGTCGCAAAACAAAGATCTGTTGCTGTTTCAAATCCTTCATTCATTTTGTGTGCTTGGTTCGTACGCTCACTCTCACTGAATGTGCCCAATGCCTCCATCCATTTCTACGACGATGAAGTTTTCGTCGACGTCGGAAATGCTTTCCTTCTCTCCGGCGGCAGTGAAGCTCTGGCGGCTTCTCTCCTTCCATTTGTAATCATTAAAAGACCCTCGGTATCGGATATGAACTGGCCTGTTGTTGTCAATGTAATGGAAGATTTGGAAATTCCCATTACAAAAACTGGAATGTATAACTTTTTCTTTGTTACATGCGATCCAAACCTCAAAGGATTAGTGATGCAAGGAGAAAGTGGAAAAATCCCTATGTTACTTGGGTTTGCCAGATTTTTTTACACCCCTATTCATTTGTCCCTTGCATATTTATTTCTTATTGTCATTTGGTTATCCCAGTATCTGAGGTTCTGGAGAGATATTCTGCAGCTTCAGCATTGCATCACAGTCGTCATTGCCCTCGGCTTATTTGAGATGGTCCTTTGGTACTTCGAGTATGTAAACTTCAACGATACAGGAATTAGGCCATATGTAATCACAACATGGGTGCTAACTGTTGGTGCTGTAAGGAAAACAATTACACAGCCACGGGTTACGGTGCTGTGCGGCCCACTCTTGGCGTTATTGGATATTACAGAGTATGTTGGGACTATAAATGACTCATTGATACATGAGAATGTAGAGCAAAATTATATTGAAAAAGATAATGGTGGAAGCACATAG

Protein sequence

MNVAKQRSVAVSNPSFILCAWFVRSLSLNVPNASIHFYDDEVFVDVGNAFLLSGGSEALAASLLPFVIIKRPSVSDMNWPVVVNVMEDLEIPITKTGMYNFFFVTCDPNLKGLVMQGESGKIPMLLGFARFFYTPIHLSLAYLFLIVIWLSQYLRFWRDILQLQHCITVVIALGLFEMVLWYFEYVNFNDTGIRPYVITTWVLTVGAVRKTITQPRVTVLCGPLLALLDITEYVGTINDSLIHENVEQNYIEKDNGGST

Homology

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BLAST of Sed0014771 vs. NCBI nr
Match: XP_023521460.1 (transmembrane protein 87B-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023521461.1 transmembrane protein 87B-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023536006.1 transmembrane protein 87B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.2 bits (718), Expect = 9.1e-72
Identity = 176/361 (48.75%), Postives = 204/361 (56.51%), Query Frame = 0


Query: 1   MNVAKQRSVAVSNPSFILCAWFV--RSLSLNVPNASIHFYDDEVFVDVGNAFLLSGGSEA 60
           MN+AKQRSV+VSNP F L  WFV   SL++N+ NASIHFYD EVFVDVGNAFLLSGGSE 
Sbjct: 1   MNIAKQRSVSVSNPLFFLYVWFVLLLSLTVNLSNASIHFYDKEVFVDVGNAFLLSGGSEG 60

Query: 61  LAASL-----LPFV---------------------------------------------- 120
           L ASL      P +                                              
Sbjct: 61  LQASLSADSDTPSIRNGQSSIQFYNITFWRRKAAADLHTDMEHSTGLIQVIIFEAADRDN 120

Query: 121 ----------------------------IIKRPSVSDMNWPVVVN----------VMEDL 180
                                       +I+RPS SD+NWPVV+N          VM+D+
Sbjct: 121 IGGSAYGGQRAICCTPDLAKLEGCKQGEVIRRPSASDINWPVVLNVQFSGNYLYTVMDDV 180

Query: 181 EIPITKTGMYNFFFVTCDPNLKGLVMQGES------GKIP-MLLGFARFFYTPIHLSLAY 240
           E+PITKTGMY+ FFVTCDPNLKGLVM G +      G +P  +    RF+   + +SLAY
Sbjct: 181 EVPITKTGMYSLFFVTCDPNLKGLVMSGRTKWKNPYGYLPGRMFSLMRFY---VFMSLAY 240

[Close]

BLAST of Sed0014771 vs. NCBI nr
Match: XP_022977175.1 (transmembrane protein 87B-like [Cucurbita maxima])

HSP 1 Score: 281.2 bits (718), Expect = 9.1e-72
Identity = 176/361 (48.75%), Postives = 204/361 (56.51%), Query Frame = 0


Query: 1   MNVAKQRSVAVSNPSFILCAWFV--RSLSLNVPNASIHFYDDEVFVDVGNAFLLSGGSEA 60
           MN+AKQRSV+VSNP F L  WFV   SL++N+ NASIHFYD EVFVDVGNAFLLSGGSE 
Sbjct: 1   MNIAKQRSVSVSNPLFFLYVWFVLLLSLTVNLSNASIHFYDKEVFVDVGNAFLLSGGSEG 60

Query: 61  LAASL-----LPFV---------------------------------------------- 120
           L ASL      P +                                              
Sbjct: 61  LQASLSADSDTPSIRNGQSSIQFYNITFWRSKAAADLHTDMEHSTGLIQVIIFEAADRDN 120

Query: 121 ----------------------------IIKRPSVSDMNWPVVVN----------VMEDL 180
                                       +I+RPS SD+NWPVV+N          VM+D+
Sbjct: 121 IGGSAYGGQRAICCTPDLAKLEGCKQGEVIRRPSASDINWPVVLNVQFSGNYLYTVMDDV 180

Query: 181 EIPITKTGMYNFFFVTCDPNLKGLVMQGES------GKIP-MLLGFARFFYTPIHLSLAY 240
           E+PITKTGMY+ FFVTCDPNLKGLVM G +      G +P  +    RF+   + +SLAY
Sbjct: 181 EVPITKTGMYSLFFVTCDPNLKGLVMSGRTKWKNPYGYLPGRMFSLMRFY---VFMSLAY 240

[Close]

BLAST of Sed0014771 vs. NCBI nr
Match: KAG7024642.1 (Transmembrane protein 87B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 281.2 bits (718), Expect = 9.1e-72
Identity = 176/361 (48.75%), Postives = 204/361 (56.51%), Query Frame = 0


Query: 1   MNVAKQRSVAVSNPSFILCAWFV--RSLSLNVPNASIHFYDDEVFVDVGNAFLLSGGSEA 60
           MN+AKQRSV+VSNP F L  WFV   SL++N+ NASIHFYD EVFVDVGNAFLLSGGSE 
Sbjct: 1   MNIAKQRSVSVSNPLFFLYVWFVLLLSLTVNLSNASIHFYDKEVFVDVGNAFLLSGGSEG 60

Query: 61  LAASL-----LPFV---------------------------------------------- 120
           L ASL      P +                                              
Sbjct: 61  LQASLSADSDTPSIRNGQSSIQFYNVTFWRSKAAADLHTDMEHSTGLIQVIIFEAADRDN 120

Query: 121 ----------------------------IIKRPSVSDMNWPVVVN----------VMEDL 180
                                       +I+RPS SD+NWPVV+N          VM+D+
Sbjct: 121 IGGSAYGGQRAICCTPDLAKLEGCKQGEVIRRPSASDINWPVVLNVQFSGNYLYTVMDDV 180

Query: 181 EIPITKTGMYNFFFVTCDPNLKGLVMQGES------GKIP-MLLGFARFFYTPIHLSLAY 240
           E+PITKTGMY+ FFVTCDPNLKGLVM G +      G +P  +    RF+   + +SLAY
Sbjct: 181 EVPITKTGMYSLFFVTCDPNLKGLVMSGRTKWKNPYGYLPGRMFSLMRFY---VFMSLAY 240

[Close]

BLAST of Sed0014771 vs. NCBI nr
Match: KAG6591758.1 (Transmembrane protein 87B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 281.2 bits (718), Expect = 9.1e-72
Identity = 176/361 (48.75%), Postives = 204/361 (56.51%), Query Frame = 0


Query: 1   MNVAKQRSVAVSNPSFILCAWFV--RSLSLNVPNASIHFYDDEVFVDVGNAFLLSGGSEA 60
           MN+AKQRSV+VSNP F L  WFV   SL++N+ NASIHFYD EVFVDVGNAFLLSGGSE 
Sbjct: 1   MNIAKQRSVSVSNPLFFLYVWFVLLLSLTVNLSNASIHFYDKEVFVDVGNAFLLSGGSEG 60

Query: 61  LAASL-----LPFV---------------------------------------------- 120
           L ASL      P +                                              
Sbjct: 61  LQASLSADSDTPSIRNGQSSIQFYNVTFWRSKAAADLHTDMEHSTGLIQVIIFEAADRDN 120

Query: 121 ----------------------------IIKRPSVSDMNWPVVVN----------VMEDL 180
                                       +I+RPS SD+NWPVV+N          VM+D+
Sbjct: 121 IGGSAYGGQRAICCTPDLAKLEGCKQGEVIRRPSASDINWPVVLNVQFSGNYLYTVMDDV 180

Query: 181 EIPITKTGMYNFFFVTCDPNLKGLVMQGES------GKIP-MLLGFARFFYTPIHLSLAY 240
           E+PITKTGMY+ FFVTCDPNLKGLVM G +      G +P  +    RF+   + +SLAY
Sbjct: 181 EVPITKTGMYSMFFVTCDPNLKGLVMSGRTKWKNPYGYLPGRMFSLMRFY---VFMSLAY 240

[Close]

BLAST of Sed0014771 vs. NCBI nr
Match: XP_022136828.1 (transmembrane protein 87A [Momordica charantia])

HSP 1 Score: 280.4 bits (716), Expect = 1.6e-71
Identity = 180/360 (50.00%), Postives = 203/360 (56.39%), Query Frame = 0


Query: 1   MNVAKQRSVAVSNPSFILCAWFV--RSLSLNVPNASIHFYDDEVFVDVGNAFLLSGGSEA 60
           MN+AK+RSVAVSNPSFIL AW V   SL+LN+ NASIHFYD E F+DVGNA+LLSGGSE 
Sbjct: 1   MNIAKRRSVAVSNPSFILYAWSVLLLSLTLNLTNASIHFYDKETFIDVGNAYLLSGGSEG 60

Query: 61  LAASL--------------------LPF-------------------------------- 120
           LAASL                    L F                                
Sbjct: 61  LAASLPANSDAPSLRNGQSFIQFYNLTFWRSKAAADQHSDMEHSTGLVQVIIFEAADRDN 120

Query: 121 ---------------------------VIIKRPSVSDMNWPVVVNV----------MEDL 180
                                       +IKRPS SD+NWPVV+NV          MED 
Sbjct: 121 IGGSAYGGQRAICCTPDLAKLEGCKQGEVIKRPSASDINWPVVLNVQFSGNYLYTRMEDK 180

Query: 181 EIPITKTGMYNFFFVTCDPNLKGLVMQGES------GKIPMLLGFARFFYTPIHLSLAYL 240
           E+ ITKTGMYN FFVTCDPNLKGLVM G +      G +P  +     FY  + +SLAYL
Sbjct: 181 EVTITKTGMYNLFFVTCDPNLKGLVMSGRTKWKNPYGYLPGRMFSLMNFY--VFMSLAYL 240

[Close]

BLAST of Sed0014771 vs. ExPASy Swiss-Prot
Match: Q28EW0 (Transmembrane protein 87A OS=Xenopus tropicalis OX=8364 GN=tmem87a PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.5e-05
Identity = 38/153 (24.84%), Postives = 76/153 (49.67%), Query Frame = 0


Query: 74  VSDMNWPVVVNVMEDLEIPITKTGMYNFFF-VTCDPNLK-----GLVMQGESGKIPMLLG 133
           ++ M++ +V    +D        G Y F   V  D N+K      + M+G  G I     
Sbjct: 157 LNQMDFDIVARTYQD--------GPYLFVLQVKGDENVKWNLSVTVSMKGPHGFISASDW 216

Query: 134 FARFFYTPIHLSLAYLFLIVIWLSQYLRFWRDILQLQHCITVVIALGLFEMVLWYFEYVN 193
               FY  + + + Y+ L ++W      +W+D+L++Q  I  VI LG+ E  ++Y EY N
Sbjct: 217 PLMIFY--MVMCIMYILLALLWFIWSACYWKDLLRIQFWIAAVIFLGMLEKAVYYAEYQN 276

Query: 194 FNDTGIRPYVITTWVLTVGAVRKTITQPRVTVL 221
            ++TG+  + +  +   + ++++T+ +  VT++
Sbjct: 277 TDNTGVSSHGLLIFAELISSIKRTLARLLVTIV 299

[Close]

BLAST of Sed0014771 vs. ExPASy Swiss-Prot
Match: Q8BKU8 (Transmembrane protein 87B OS=Mus musculus OX=10090 GN=Tmem87b PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.9e-05
Identity = 26/83 (31.33%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 138 LSLAYLFLIVIWLSQYLRFWRDILQLQHCITVVIALGLFEMVLWYFEYVNFNDTGIRPYV 197
           + + Y+   V+WL     +W+DIL++Q  I  VI LG+ E  ++Y EY N N TG+    
Sbjct: 224 MCIVYILYGVLWLLWSACYWKDILRIQFWIAAVIFLGMLEKAVFYSEYQNINSTGLSTQG 283

Query: 198 ITTWVLTVGAVRKTITQPRVTVL 221
           +  +   + AV++T+ +  V ++
Sbjct: 284 LLIFAELISAVKRTLARLLVIIV 306

[Close]

BLAST of Sed0014771 vs. ExPASy Swiss-Prot
Match: Q96K49 (Transmembrane protein 87B OS=Homo sapiens OX=9606 GN=TMEM87B PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.3e-04
Identity = 23/83 (27.71%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 138 LSLAYLFLIVIWLSQYLRFWRDILQLQHCITVVIALGLFEMVLWYFEYVNFNDTGIRPYV 197
           + + Y+   ++WL+    +W+DIL++Q  I  VI LG+ E  ++Y EY N ++TG+    
Sbjct: 223 MCIVYILYGILWLTWSACYWKDILRIQFWIAAVIFLGMLEKAVFYSEYQNISNTGLSTQG 282

Query: 198 ITTWVLTVGAVRKTITQPRVTVL 221
           +  +   + A+++T+ +  V ++
Sbjct: 283 LLIFAELISAIKRTLARLLVIIV 305

[Close]

BLAST of Sed0014771 vs. ExPASy TrEMBL
Match: A0A6J1ILK3 (transmembrane protein 87B-like OS=Cucurbita maxima OX=3661 GN=LOC111477329 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 4.4e-72
Identity = 176/361 (48.75%), Postives = 204/361 (56.51%), Query Frame = 0


Query: 1   MNVAKQRSVAVSNPSFILCAWFV--RSLSLNVPNASIHFYDDEVFVDVGNAFLLSGGSEA 60
           MN+AKQRSV+VSNP F L  WFV   SL++N+ NASIHFYD EVFVDVGNAFLLSGGSE 
Sbjct: 1   MNIAKQRSVSVSNPLFFLYVWFVLLLSLTVNLSNASIHFYDKEVFVDVGNAFLLSGGSEG 60

Query: 61  LAASL-----LPFV---------------------------------------------- 120
           L ASL      P +                                              
Sbjct: 61  LQASLSADSDTPSIRNGQSSIQFYNITFWRSKAAADLHTDMEHSTGLIQVIIFEAADRDN 120

Query: 121 ----------------------------IIKRPSVSDMNWPVVVN----------VMEDL 180
                                       +I+RPS SD+NWPVV+N          VM+D+
Sbjct: 121 IGGSAYGGQRAICCTPDLAKLEGCKQGEVIRRPSASDINWPVVLNVQFSGNYLYTVMDDV 180

Query: 181 EIPITKTGMYNFFFVTCDPNLKGLVMQGES------GKIP-MLLGFARFFYTPIHLSLAY 240
           E+PITKTGMY+ FFVTCDPNLKGLVM G +      G +P  +    RF+   + +SLAY
Sbjct: 181 EVPITKTGMYSLFFVTCDPNLKGLVMSGRTKWKNPYGYLPGRMFSLMRFY---VFMSLAY 240

[Close]

BLAST of Sed0014771 vs. ExPASy TrEMBL
Match: A0A6J1C8L0 (transmembrane protein 87A OS=Momordica charantia OX=3673 GN=LOC111008429 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 7.5e-72
Identity = 180/360 (50.00%), Postives = 203/360 (56.39%), Query Frame = 0


Query: 1   MNVAKQRSVAVSNPSFILCAWFV--RSLSLNVPNASIHFYDDEVFVDVGNAFLLSGGSEA 60
           MN+AK+RSVAVSNPSFIL AW V   SL+LN+ NASIHFYD E F+DVGNA+LLSGGSE 
Sbjct: 1   MNIAKRRSVAVSNPSFILYAWSVLLLSLTLNLTNASIHFYDKETFIDVGNAYLLSGGSEG 60

Query: 61  LAASL--------------------LPF-------------------------------- 120
           LAASL                    L F                                
Sbjct: 61  LAASLPANSDAPSLRNGQSFIQFYNLTFWRSKAAADQHSDMEHSTGLVQVIIFEAADRDN 120

Query: 121 ---------------------------VIIKRPSVSDMNWPVVVNV----------MEDL 180
                                       +IKRPS SD+NWPVV+NV          MED 
Sbjct: 121 IGGSAYGGQRAICCTPDLAKLEGCKQGEVIKRPSASDINWPVVLNVQFSGNYLYTRMEDK 180

Query: 181 EIPITKTGMYNFFFVTCDPNLKGLVMQGES------GKIPMLLGFARFFYTPIHLSLAYL 240
           E+ ITKTGMYN FFVTCDPNLKGLVM G +      G +P  +     FY  + +SLAYL
Sbjct: 181 EVTITKTGMYNLFFVTCDPNLKGLVMSGRTKWKNPYGYLPGRMFSLMNFY--VFMSLAYL 240

[Close]

BLAST of Sed0014771 vs. ExPASy TrEMBL
Match: A0A6J1F677 (transmembrane protein 87B-like OS=Cucurbita moschata OX=3662 GN=LOC111442714 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.7e-71
Identity = 175/361 (48.48%), Postives = 203/361 (56.23%), Query Frame = 0


Query: 1   MNVAKQRSVAVSNPSFILCAWFV--RSLSLNVPNASIHFYDDEVFVDVGNAFLLSGGSEA 60
           MN+AKQRS +VSNP F L  WFV   SL++N+ NASIHFYD EVFVDVGNAFLLSGGSE 
Sbjct: 1   MNIAKQRSFSVSNPLFFLYVWFVLLLSLTVNLSNASIHFYDKEVFVDVGNAFLLSGGSEG 60

Query: 61  LAASL-----LPFV---------------------------------------------- 120
           L ASL      P +                                              
Sbjct: 61  LQASLSADSDTPSIRNGQSSIQFYNITFWRSKAAADLHTDMEHSTGLIQVIIFEAADRDN 120

Query: 121 ----------------------------IIKRPSVSDMNWPVVVN----------VMEDL 180
                                       +I+RPS SD+NWPVV+N          VM+D+
Sbjct: 121 IGGSAYGGQRAICCTPDLAKLEGCKQGEVIRRPSASDINWPVVLNVQFSGNYLYTVMDDV 180

Query: 181 EIPITKTGMYNFFFVTCDPNLKGLVMQGES------GKIP-MLLGFARFFYTPIHLSLAY 240
           E+PITKTGMY+ FFVTCDPNLKGLVM G +      G +P  +    RF+   + +SLAY
Sbjct: 181 EVPITKTGMYSLFFVTCDPNLKGLVMSGRTKWKNPYGYLPGRMFSLMRFY---VFMSLAY 240

[Close]

BLAST of Sed0014771 vs. ExPASy TrEMBL
Match: A0A6J1FHJ1 (transmembrane protein 87A-like OS=Cucurbita moschata OX=3662 GN=LOC111445826 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.9e-71
Identity = 176/361 (48.75%), Postives = 203/361 (56.23%), Query Frame = 0


Query: 1   MNVAKQRSVAVSNPSFILCAWFV--RSLSLNVPNASIHFYDDEVFVDVGNAFLLSGGSEA 60
           MN+  QRS+AVSNP FIL AWF+  +SL+LN+ NASIHFYD E F+DVGN+FLLSGGSE 
Sbjct: 1   MNILTQRSLAVSNPLFILYAWFILLQSLTLNLANASIHFYDKEAFIDVGNSFLLSGGSEG 60

Query: 61  LAASL-----LPFV---------------------------------------------- 120
           LAASL      P V                                              
Sbjct: 61  LAASLAANSDTPSVRNVQSSIQFYNITFWRSKAAADQHTDMEHSTGLIQVIIFEAADRDN 120

Query: 121 ----------------------------IIKRPSVSDMNWPVVVNV----------MEDL 180
                                       +IKRPS SD+NWPVVVNV          MED+
Sbjct: 121 IGGSAYGGQRAVCCTPDLAKFEGCKQGEVIKRPSSSDINWPVVVNVQFSGNYLHTRMEDM 180

Query: 181 EIPITKTGMYNFFFVTCDPNLKGLVMQGES------GKIP-MLLGFARFFYTPIHLSLAY 240
           E+ ITKTGMYN FFVTCDPNLKGLVM G +      G +P  +    RF+   + +S+AY
Sbjct: 181 EVSITKTGMYNLFFVTCDPNLKGLVMSGRTKWKNPHGYLPGRMFSLMRFY---VCMSVAY 240

[Close]

BLAST of Sed0014771 vs. ExPASy TrEMBL
Match: A0A6J1J0P2 (transmembrane protein 87A-like OS=Cucurbita maxima OX=3661 GN=LOC111480265 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.7e-71
Identity = 175/361 (48.48%), Postives = 205/361 (56.79%), Query Frame = 0


Query: 1   MNVAKQRSVAVSNPSFILCAWFV--RSLSLNVPNASIHFYDDEVFVDVGNAFLLSGGSEA 60
           MN+ KQRS+AVSNP FIL AWF+  +SL++N+ NASIHFYD E F+DVGN+FLLSGGSE 
Sbjct: 1   MNILKQRSLAVSNPLFILYAWFILLQSLTVNLANASIHFYDKEAFIDVGNSFLLSGGSEG 60

Query: 61  LAASL---------------LPFV------------------------------------ 120
           LAASL               + F                                     
Sbjct: 61  LAASLAANSDTSSVRNVQSSIQFYNITFWRSKAAADQHTDMEHSPGLIQVIIFEAADRDN 120

Query: 121 ----------------------------IIKRPSVSDMNWPVVVNV----------MEDL 180
                                       +IKRPS SD+NWPVV+NV          MED+
Sbjct: 121 IGGSAYGGQRAVCCTPDLAKFEGCKQGEVIKRPSSSDINWPVVLNVQFSGNYLHTRMEDM 180

Query: 181 EIPITKTGMYNFFFVTCDPNLKGLVMQGES------GKIP-MLLGFARFFYTPIHLSLAY 240
           E+ ITKTGMYN FFVTCDPNLKGLVM G +      G +P  +    RF+   + +S+AY
Sbjct: 181 EVSITKTGMYNLFFVTCDPNLKGLVMSGRTKWKNPHGYLPGRMFSLMRFY---VCMSVAY 240

[Close]

BLAST of Sed0014771 vs. TAIR 10
Match: AT2G01070.1 (Lung seven transmembrane receptor family protein )

HSP 1 Score: 166.0 bits (419), Expect = 4.0e-41
Identity = 117/329 (35.56%), Postives = 154/329 (46.81%), Query Frame = 0


Query: 15  SFILCAWFVRSLSLNVPNASIHFYDDEVFVDVGNAFLLSGGSEALAASLLPFV------- 74
           S +LC  F+ SL   +  AS H Y  + F DVGN+ LL GGSE + AS    +       
Sbjct: 10  SALLCP-FLLSLHFRIAGASAHIYSSQPFHDVGNSLLLYGGSEGIFASSRSLIRFENITL 69

Query: 75  -------------------------------------------------------IIKRP 134
                                                                  II+ P
Sbjct: 70  WRTITGKGHRSNGLVQAVIFEASDRNNIGGSAYGGQRSICCTPDLAKLQGCKQGEIIRIP 129

Query: 135 SVSDMNWPVVVNV----------MEDLEIPITKTGMYNFFFVTCDPNLKGLVMQGES--- 194
           S  D  WP+++ V          M D EI ITKTG+YN  F++CDP LKGL M G++   
Sbjct: 130 SPHDPQWPILLPVRFKGKRSSAKMADTEILITKTGIYNLLFISCDPQLKGLKMTGKTVWK 189

Query: 195 ---GKIPMLLGFARFFYTPIHLSLAYLFLIVIWLSQYLRFWRDILQLQHCITVVIALGLF 240
              G +P  +     FY  +++SLAYL L  +W  QYLRF  DIL LQHCIT VI LGL 
Sbjct: 190 NPDGYLPGRMAPLVNFY--VYMSLAYLLLSAVWFFQYLRFRMDILPLQHCITAVILLGLL 249

[Close]

BLAST of Sed0014771 vs. TAIR 10
Match: AT2G01070.2 (Lung seven transmembrane receptor family protein )

HSP 1 Score: 166.0 bits (419), Expect = 4.0e-41
Identity = 117/329 (35.56%), Postives = 154/329 (46.81%), Query Frame = 0


Query: 15  SFILCAWFVRSLSLNVPNASIHFYDDEVFVDVGNAFLLSGGSEALAASLLPFV------- 74
           S +LC  F+ SL   +  AS H Y  + F DVGN+ LL GGSE + AS    +       
Sbjct: 10  SALLCP-FLLSLHFRIAGASAHIYSSQPFHDVGNSLLLYGGSEGIFASSRSLIRFENITL 69

Query: 75  -------------------------------------------------------IIKRP 134
                                                                  II+ P
Sbjct: 70  WRTITGKGHRSNGLVQAVIFEASDRNNIGGSAYGGQRSICCTPDLAKLQGCKQGEIIRIP 129

Query: 135 SVSDMNWPVVVNV----------MEDLEIPITKTGMYNFFFVTCDPNLKGLVMQGES--- 194
           S  D  WP+++ V          M D EI ITKTG+YN  F++CDP LKGL M G++   
Sbjct: 130 SPHDPQWPILLPVRFKGKRSSAKMADTEILITKTGIYNLLFISCDPQLKGLKMTGKTVWK 189

Query: 195 ---GKIPMLLGFARFFYTPIHLSLAYLFLIVIWLSQYLRFWRDILQLQHCITVVIALGLF 240
              G +P  +     FY  +++SLAYL L  +W  QYLRF  DIL LQHCIT VI LGL 
Sbjct: 190 NPDGYLPGRMAPLVNFY--VYMSLAYLLLSAVWFFQYLRFRMDILPLQHCITAVILLGLL 249

[Close]

BLAST of Sed0014771 vs. TAIR 10
Match: AT1G72480.1 (Lung seven transmembrane receptor family protein )

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-32
Identity = 69/160 (43.12%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 68  IIKRPSVSDMNWPVVVNV----------MEDLEIPITKTGMYNFFFVTCDPNLKGLVMQG 127
           +I RPS  D  WP V  V          +    I +T+TGMYN +F+ CD +LK LV++G
Sbjct: 126 VIYRPSAKDSGWPQVFGVSLAENEFSVILPTRSIQVTRTGMYNLYFIHCDSDLKDLVVEG 185

Query: 128 E------SGKIPMLLGFARFFYTPIHLSLAYLFLIVIWLSQYLRFWRDILQLQHCITVVI 187
           +      +G +P  +    +FY    +SLA++ L + W SQ  RFWR++L LQ+C+T+VI
Sbjct: 186 KTIWKNPTGYLPGRMAPLMYFYG--FMSLAFVLLGIFWFSQCARFWREVLPLQNCLTLVI 245

Query: 188 ALGLFEMVLWYFEYVNFNDTGIRPYVITTWVLTVGAVRKT 212
            LG+ EM LWYF+Y  FN+TGIRP VIT W +T G++++T
Sbjct: 246 TLGMCEMALWYFDYAEFNETGIRPTVITIWAVTFGSIKRT 283

[Close]

BLAST of Sed0014771 vs. TAIR 10
Match: AT1G61670.1 (Lung seven transmembrane receptor family protein )

HSP 1 Score: 115.9 bits (289), Expect = 4.7e-26
Identity = 65/168 (38.69%), Postives = 99/168 (58.93%), Query Frame = 0


Query: 67  VIIKRPSVSDMNWPVVVNV----------MEDLEIPITKTGMYNFFFVTCDPNLKGLVMQ 126
           VIIKR S +D+ WP  +            M    + I KTGMY  +F+ CDP L G  ++
Sbjct: 142 VIIKRES-NDVEWPRQIKTFFKGNKTEVNMSPETVVINKTGMYYLYFMICDPELDGTRIK 201

Query: 127 GES----------GKIPMLLGFARFFYTPIHLSLAYLFLIVIWLSQYLRFWRDILQLQHC 186
           G +          GK+  L+    F      +SLAY+ L ++W  ++++FW+DI+QL + 
Sbjct: 202 GRTVWKNPDGYLPGKVAPLMNVFGF------MSLAYILLGLVWFVRFVQFWKDIIQLHYH 261

Query: 187 ITVVIALGLFEMVLWYFEYVNFNDTGIRPYVITTWVLTVGAVRKTITQ 215
           IT+VIALG+ EM + YFEYVNFN TG+RP  +T W +T  +++KT+++
Sbjct: 262 ITLVIALGMCEMAVRYFEYVNFNSTGMRPMDVTLWAVTFSSIKKTLSR 302

[Close]

BLAST of Sed0014771 vs. TAIR 10
Match: AT1G10980.1 (Lung seven transmembrane receptor family protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-13
Identity = 41/134 (30.60%), Postives = 72/134 (53.73%), Query Frame = 0


Query: 93  ITKTGMYNFFFVTCDPNLKGLVMQGES------GKIPMLLGFARFFYTPIHLSLAYLFLI 152
           I KTG+Y  +F+TCDP L G  ++G +      G +       + FY    + LAY+ L 
Sbjct: 178 IKKTGLYTVYFMTCDPELDGATIRGRTVWKNRGGYLQGEKAPLKKFYA--SMLLAYVVLG 237

Query: 153 VIWLSQYLRFWRDILQLQHCITVVIALGLFEMVLWYFEYVNFNDTGIRPYVITTWVLTVG 212
           ++W  Q  ++W+D +QL   I  VIA  + E+   Y ++V  +  G  P  +T W +T+ 
Sbjct: 238 LVWFPQVAQYWKDGIQLHSHINFVIAFTMGELAFLYLDFVYLDSAGTSPMEVTVWAITLS 297

Query: 213 AVRKTITQPRVTVL 221
           ++RK +++  + V+
Sbjct: 298 SMRKALSRLLLLVI 309

The following BLAST results are available for this feature:

BLAST of Sed0014771 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521460.1	9.1e-72	48.75	transmembrane protein 87B-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_02352...	[more]
XP_022977175.1	9.1e-72	48.75	transmembrane protein 87B-like [Cucurbita maxima]	[more]
KAG7024642.1	9.1e-72	48.75	Transmembrane protein 87B [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6591758.1	9.1e-72	48.75	Transmembrane protein 87B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022136828.1	1.6e-71	50.00	transmembrane protein 87A [Momordica charantia]	[more]

BLAST of Sed0014771 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q28EW0	4.5e-05	24.84	Transmembrane protein 87A OS=Xenopus tropicalis OX=8364 GN=tmem87a PE=2 SV=1	[more]
Q8BKU8	5.9e-05	31.33	Transmembrane protein 87B OS=Mus musculus OX=10090 GN=Tmem87b PE=2 SV=1	[more]
Q96K49	1.3e-04	27.71	Transmembrane protein 87B OS=Homo sapiens OX=9606 GN=TMEM87B PE=1 SV=1	[more]

BLAST of Sed0014771 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ILK3	4.4e-72	48.75	transmembrane protein 87B-like OS=Cucurbita maxima OX=3661 GN=LOC111477329 PE=4 ...	[more]
A0A6J1C8L0	7.5e-72	50.00	transmembrane protein 87A OS=Momordica charantia OX=3673 GN=LOC111008429 PE=4 SV...	[more]
A0A6J1F677	1.7e-71	48.48	transmembrane protein 87B-like OS=Cucurbita moschata OX=3662 GN=LOC111442714 PE=...	[more]
A0A6J1FHJ1	2.9e-71	48.75	transmembrane protein 87A-like OS=Cucurbita moschata OX=3662 GN=LOC111445826 PE=...	[more]
A0A6J1J0P2	3.7e-71	48.48	transmembrane protein 87A-like OS=Cucurbita maxima OX=3661 GN=LOC111480265 PE=4 ...	[more]

BLAST of Sed0014771 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01070.1	4.0e-41	35.56	Lung seven transmembrane receptor family protein	[more]
AT2G01070.2	4.0e-41	35.56	Lung seven transmembrane receptor family protein	[more]
AT1G72480.1	2.0e-32	43.13	Lung seven transmembrane receptor family protein	[more]
AT1G61670.1	4.7e-26	38.69	Lung seven transmembrane receptor family protein	[more]
AT1G10980.1	2.1e-13	30.60	Lung seven transmembrane receptor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009637	Transmembrane protein GPR107/GPR108-like	PFAM	PF06814	Lung_7-TM_R	coord: 93..214 e-value: 8.0E-22 score: 77.8
IPR009637	Transmembrane protein GPR107/GPR108-like	PANTHER	PTHR21229	LUNG SEVEN TRANSMEMBRANE RECEPTOR	coord: 68..214
None	No IPR available	PANTHER	PTHR21229:SF15	LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN	coord: 68..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014771.1	Sed0014771.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane