Sed0014540 (gene) Chayote v1

Overview


Name	Sed0014540
Type	gene
Organism	Sechium edule (Chayote v1)
Description	zinc finger protein 1-like
Location	LG13: 24704970 .. 24705727 (+)
RNA-Seq Expression	Sed0014540
Synteny	Sed0014540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAACCCAAACCTTTTTCCAAATGGAACCCCAATCCGGCCGGAACCCGTTTTCCGGCGACGGCGAGTTTTCCGACGACCGGAGCAGGCTGTTGGATCTCAATCTGTCATCAAATTACTCATCAGATTCAACAACAAAACCAAGAATTTTTTCATGCAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCTTTGGGGGGCCATCAAAATGCCCATAAAAGAGAGAGAACTTTGGCAAAACGGGTTCAAAGATTTGATTGGGCGGCGGCGACGCCACTCCACGGCGGCGCGTTGGGAATTCACGCGCATGCTCAGCAATTTCAAAAGCCCATGGGCTTTTTTGGTGGGCCTGCTTCTTCTTCTCAGTTGTGGCCGGCTAGGCCGCCCATTATGGGCCAGCAACCGGCGGTGGGCCGGCTCACGGCGGCGGTTTCTGGCCGGAATTTCGTGCGGTTTGATGACGTGGCTGGGTGGTCGCCGATTGGAGCCTCAAACGCCGGTAATGTTAGTGTTGTTAATTCTCAGACCAAACAAGATCAAGATCATCAAACCAATTTTCTTGACTTGTCTCTTAAATTATAACCTTAAAGTCAAAATTATTGTTGTAATAATTAATTATTGGGTTAAATGTTCGAATTTTTAGAGTAGTATTTAATTTTTCCTTTTGAAATCTAGAGTTGTATTTAGTTAGTTCTTGCACTGCTTGATTTTTGTTCTATTATATAAGTTTATGAGTTTTTTTTTTTCGACAAAAA

mRNA sequence

AAAAAAACCCAAACCTTTTTCCAAATGGAACCCCAATCCGGCCGGAACCCGTTTTCCGGCGACGGCGAGTTTTCCGACGACCGGAGCAGGCTGTTGGATCTCAATCTGTCATCAAATTACTCATCAGATTCAACAACAAAACCAAGAATTTTTTCATGCAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCTTTGGGGGGCCATCAAAATGCCCATAAAAGAGAGAGAACTTTGGCAAAACGGGTTCAAAGATTTGATTGGGCGGCGGCGACGCCACTCCACGGCGGCGCGTTGGGAATTCACGCGCATGCTCAGCAATTTCAAAAGCCCATGGGCTTTTTTGGTGGGCCTGCTTCTTCTTCTCAGTTGTGGCCGGCTAGGCCGCCCATTATGGGCCAGCAACCGGCGGTGGGCCGGCTCACGGCGGCGGTTTCTGGCCGGAATTTCGTGCGGTTTGATGACGTGGCTGGGTGGTCGCCGATTGGAGCCTCAAACGCCGGTAATGTTAGTGTTGTTAATTCTCAGACCAAACAAGATCAAGATCATCAAACCAATTTTCTTGACTTGTCTCTTAAATTATAACCTTAAAGTCAAAATTATTGTTGTAATAATTAATTATTGGGTTAAATGTTCGAATTTTTAGAGTAGTATTTAATTTTTCCTTTTGAAATCTAGAGTTGTATTTAGTTAGTTCTTGCACTGCTTGATTTTTGTTCTATTATATAAGTTTATGAGTTTTTTTTTTTCGACAAAAA

Coding sequence (CDS)

ATGGAACCCCAATCCGGCCGGAACCCGTTTTCCGGCGACGGCGAGTTTTCCGACGACCGGAGCAGGCTGTTGGATCTCAATCTGTCATCAAATTACTCATCAGATTCAACAACAAAACCAAGAATTTTTTCATGCAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCTTTGGGGGGCCATCAAAATGCCCATAAAAGAGAGAGAACTTTGGCAAAACGGGTTCAAAGATTTGATTGGGCGGCGGCGACGCCACTCCACGGCGGCGCGTTGGGAATTCACGCGCATGCTCAGCAATTTCAAAAGCCCATGGGCTTTTTTGGTGGGCCTGCTTCTTCTTCTCAGTTGTGGCCGGCTAGGCCGCCCATTATGGGCCAGCAACCGGCGGTGGGCCGGCTCACGGCGGCGGTTTCTGGCCGGAATTTCGTGCGGTTTGATGACGTGGCTGGGTGGTCGCCGATTGGAGCCTCAAACGCCGGTAATGTTAGTGTTGTTAATTCTCAGACCAAACAAGATCAAGATCATCAAACCAATTTTCTTGACTTGTCTCTTAAATTATAA

Protein sequence

MEPQSGRNPFSGDGEFSDDRSRLLDLNLSSNYSSDSTTKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQRFDWAAATPLHGGALGIHAHAQQFQKPMGFFGGPASSSQLWPARPPIMGQQPAVGRLTAAVSGRNFVRFDDVAGWSPIGASNAGNVSVVNSQTKQDQDHQTNFLDLSLKL

Homology

[Close]

BLAST of Sed0014540 vs. NCBI nr
Match: XP_022936656.1 (zinc finger protein 1-like [Cucurbita moschata])

HSP 1 Score: 280.8 bits (717), Expect = 8.6e-72
Identity = 153/205 (74.63%), Postives = 163/205 (79.51%), Query Frame = 0


Query: 1   MEPQSGRNPFSGDG---------EFSDDRSRLLDLNLSSNYSSDSTTKPRIFSCNYCQRK 60
           MEP + RNP SGDG         E SDDRS LLDL LSSN SSD+TTKPR+FSCNYCQRK
Sbjct: 42  MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSN-SSDATTKPRVFSCNYCQRK 101

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAAATPLHGGA-----LGIHAHAQQFQKPMGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW AA PLHGGA     LGIHAH+QQ QKP+GF
Sbjct: 102 FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 161

Query: 121 FGGPASSSQLWPARPPIMGQQPAVGRLTAAVSGRNFVRFDDVAGWSPIGASNAG-----N 180
           F GP  +SQLWP RP  MGQQPAVGRLT  + GRNF RFDDVAGW  IG+SNAG     N
Sbjct: 162 FSGPGPTSQLWP-RPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN 221

Query: 181 VSVVNSQTKQDQDHQTNFLDLSLKL 187
           VS+V+SQTKQDQD QTNFLDLSLKL
Sbjct: 222 VSIVHSQTKQDQD-QTNFLDLSLKL 243

[Close]

BLAST of Sed0014540 vs. NCBI nr
Match: KAG6591545.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 280.8 bits (717), Expect = 8.6e-72
Identity = 153/205 (74.63%), Postives = 163/205 (79.51%), Query Frame = 0


Query: 1   MEPQSGRNPFSGDG---------EFSDDRSRLLDLNLSSNYSSDSTTKPRIFSCNYCQRK 60
           MEP + RNP SGDG         E SDDRS LLDL LSSN SSD+TTKPR+FSCNYCQRK
Sbjct: 1   MEPLTDRNPLSGDGEEEDERETAELSDDRSSLLDLQLSSN-SSDATTKPRVFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAAATPLHGGA-----LGIHAHAQQFQKPMGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW AA PLHGGA     LGIHAH+QQ QKP+GF
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 120

Query: 121 FGGPASSSQLWPARPPIMGQQPAVGRLTAAVSGRNFVRFDDVAGWSPIGASNAG-----N 180
           F GP  +SQLWP RP  MGQQPAVGRLT  + GRNF RFDDVAGW  IG+SNAG     N
Sbjct: 121 FSGPGPTSQLWP-RPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN 180

Query: 181 VSVVNSQTKQDQDHQTNFLDLSLKL 187
           VS+V+SQTKQDQD QTNFLDLSLKL
Sbjct: 181 VSIVHSQTKQDQD-QTNFLDLSLKL 202

[Close]

BLAST of Sed0014540 vs. NCBI nr
Match: KAG7024430.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.8 bits (717), Expect = 8.6e-72
Identity = 153/205 (74.63%), Postives = 163/205 (79.51%), Query Frame = 0


Query: 1   MEPQSGRNPFSGDG---------EFSDDRSRLLDLNLSSNYSSDSTTKPRIFSCNYCQRK 60
           MEP + RNP SGDG         E SDDRS LLDL LSSN SSD+TTKPR+FSCNYCQRK
Sbjct: 1   MEPLTDRNPLSGDGEEDDERETAELSDDRSSLLDLQLSSN-SSDATTKPRVFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAAATPLHGGA-----LGIHAHAQQFQKPMGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW AA PLHGGA     LGIHAH+QQ QKP+GF
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 120

Query: 121 FGGPASSSQLWPARPPIMGQQPAVGRLTAAVSGRNFVRFDDVAGWSPIGASNAG-----N 180
           F GP  +SQLWP RP  MGQQPAVGRLT  + GRNF RFDDVAGW  IG+SNAG     N
Sbjct: 121 FSGPGPTSQLWP-RPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN 180

Query: 181 VSVVNSQTKQDQDHQTNFLDLSLKL 187
           VS+V+SQTKQDQD QTNFLDLSLKL
Sbjct: 181 VSIVHSQTKQDQD-QTNFLDLSLKL 202

[Close]

BLAST of Sed0014540 vs. NCBI nr
Match: XP_022976191.1 (zinc finger protein 1-like [Cucurbita maxima])

HSP 1 Score: 277.7 bits (709), Expect = 7.3e-71
Identity = 152/205 (74.15%), Postives = 162/205 (79.02%), Query Frame = 0


Query: 1   MEPQSGRNPFSGDG---------EFSDDRSRLLDLNLSSNYSSDSTTKPRIFSCNYCQRK 60
           MEP + RNP SGDG         E SDDRS LLDL LSSN SSD+TTKPR+FSCNYCQRK
Sbjct: 41  MEPLTDRNPLSGDGEEDDDREPAELSDDRSSLLDLQLSSN-SSDATTKPRVFSCNYCQRK 100

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAAATPLHGGA-----LGIHAHAQQFQKPMGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW AA PLHGGA     LGIHAH+QQ QKP+GF
Sbjct: 101 FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 160

Query: 121 FGGPASSSQLWPARPPIMGQQPAVGRLTAAVSGRNFVRFDDVAGWSPIGASNAG-----N 180
           F GP  +SQLWP R   MGQQPAVGRLT  + GRNF RFDDVAGW  IG+SNAG     N
Sbjct: 161 FSGPGPTSQLWP-RTLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN 220

Query: 181 VSVVNSQTKQDQDHQTNFLDLSLKL 187
           VS+V+SQTKQDQD QTNFLDLSLKL
Sbjct: 221 VSIVHSQTKQDQD-QTNFLDLSLKL 242

[Close]

BLAST of Sed0014540 vs. NCBI nr
Match: XP_023536424.1 (zinc finger protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.2 bits (705), Expect = 2.1e-70
Identity = 151/205 (73.66%), Postives = 160/205 (78.05%), Query Frame = 0


Query: 1   MEPQSGRNPFSGDG---------EFSDDRSRLLDLNLSSNYSSDSTTKPRIFSCNYCQRK 60
           MEP + RNP SGDG         E SDDRS LLDL LSSN SSD+TTKPR+FSCNYCQRK
Sbjct: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSN-SSDATTKPRVFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAAATPLHGGA-----LGIHAHAQQFQKPMGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW AA PLHGGA     LGIHAH+QQ QKP+GF
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 120

Query: 121 FGGPASSSQLWPARPPIMGQQPAVGRLTAAVSGRNFVRFDDVAGWSPIGASNAG-----N 180
           F GP  +SQLWP RP  MGQQPAVGRLT    GRNF RFDDV GW  IG+SNAG     N
Sbjct: 121 FSGPGPTSQLWP-RPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNN 180

Query: 181 VSVVNSQTKQDQDHQTNFLDLSLKL 187
           VS+V+SQTK DQD QTNFLDLSLKL
Sbjct: 181 VSIVHSQTKPDQD-QTNFLDLSLKL 202

[Close]

BLAST of Sed0014540 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-15
Identity = 67/183 (36.61%), Postives = 90/183 (49.18%), Query Frame = 0


Query: 32  YSSDSTTKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR----------------- 91
           +  +    PR+FSCNYCQRKF+SSQALGGHQNAHKRERTLAKR                 
Sbjct: 57  HQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFA 116

Query: 92  -----VQRFDWAAATPLHG-----GALGIHAHAQQFQKPMGFFGGPASSSQLWPARPPIM 151
                V RF   A+ PLHG       LGI AH+    KP  F G   +S  L       +
Sbjct: 117 FGHGSVSRFASMASLPLHGSVNNRSTLGIQAHS-TIHKP-SFLGRQTTS--LSHVFKQSI 176

Query: 152 GQQPAVGRLTAAVSGRNFVRFD-DVAGWSPIGASNAGNVSVVNSQTKQDQDHQTNFLDLS 187
            Q+P +G++          +F  +VAG +      A    + + ++ Q+  +Q   +DL+
Sbjct: 177 HQKPTIGKMLPE-------KFHLEVAGNNNSNMVAAKLERIGHFKSNQEDHNQFKKIDLT 228

[Close]

BLAST of Sed0014540 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.9e-15
Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 34  SDSTTKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQRFDWAAAT--------- 93
           S ++T+ ++FSCNYCQR F+SSQALGGHQNAHKRERTLAKR QR   +A+          
Sbjct: 52  STTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSP 111

Query: 94  -PLHG-----GALGIHAHAQQFQKPMGFFGGPASSSQLWPARPPIMGQQPAVGR 133
            P HG      +LGI AH+    K   + G      Q+  +R P   QQPA+G+
Sbjct: 112 LPFHGQYNNHRSLGIQAHSIS-HKLSSYNGFGGHYGQINWSRLP-FDQQPAIGK 163

[Close]

BLAST of Sed0014540 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-13
Identity = 46/89 (51.69%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 18  DDRSRLLDLNLSSNYSSDS---------TTKPRIFSCNYCQRKFFSSQALGGHQNAHKRE 77
           D  S  L L LSS   S +         +   R+FSCNYCQRKF+SSQALGGHQNAHKRE
Sbjct: 51  DLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRE 110

Query: 78  RTLAKRVQRFDWAAATPLHGGALGIHAHA 98
           RTLAKR  R   A   P  G +    A A
Sbjct: 111 RTLAKRAMRMGLAGVFPGRGSSSNYAAAA 139

[Close]

BLAST of Sed0014540 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-13
Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 24 LDLNLSSNYSSDSTT-----KPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR 75
          LDL L+  ++ D+ +      PR+FSCNYC+RKF+SSQALGGHQNAHKRERT+AKR
Sbjct: 35 LDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR 90

[Close]

BLAST of Sed0014540 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.4e-13
Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 29 SSNYSSDSTTKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR 75
          SS  SS    +PR+FSCNYCQRKF+SSQALGGHQNAHK ERTLAK+
Sbjct: 38 SSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKK 83

[Close]

BLAST of Sed0014540 vs. ExPASy TrEMBL
Match: A0A6J1F839 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.1e-72
Identity = 153/205 (74.63%), Postives = 163/205 (79.51%), Query Frame = 0


Query: 1   MEPQSGRNPFSGDG---------EFSDDRSRLLDLNLSSNYSSDSTTKPRIFSCNYCQRK 60
           MEP + RNP SGDG         E SDDRS LLDL LSSN SSD+TTKPR+FSCNYCQRK
Sbjct: 42  MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSN-SSDATTKPRVFSCNYCQRK 101

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAAATPLHGGA-----LGIHAHAQQFQKPMGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW AA PLHGGA     LGIHAH+QQ QKP+GF
Sbjct: 102 FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 161

Query: 121 FGGPASSSQLWPARPPIMGQQPAVGRLTAAVSGRNFVRFDDVAGWSPIGASNAG-----N 180
           F GP  +SQLWP RP  MGQQPAVGRLT  + GRNF RFDDVAGW  IG+SNAG     N
Sbjct: 162 FSGPGPTSQLWP-RPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN 221

Query: 181 VSVVNSQTKQDQDHQTNFLDLSLKL 187
           VS+V+SQTKQDQD QTNFLDLSLKL
Sbjct: 222 VSIVHSQTKQDQD-QTNFLDLSLKL 243

[Close]

BLAST of Sed0014540 vs. ExPASy TrEMBL
Match: A0A6J1IG94 (zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.5e-71
Identity = 152/205 (74.15%), Postives = 162/205 (79.02%), Query Frame = 0


Query: 1   MEPQSGRNPFSGDG---------EFSDDRSRLLDLNLSSNYSSDSTTKPRIFSCNYCQRK 60
           MEP + RNP SGDG         E SDDRS LLDL LSSN SSD+TTKPR+FSCNYCQRK
Sbjct: 41  MEPLTDRNPLSGDGEEDDDREPAELSDDRSSLLDLQLSSN-SSDATTKPRVFSCNYCQRK 100

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAAATPLHGGA-----LGIHAHAQQFQKPMGF 120
           FFSSQALGGHQNAHKRERTLAKRVQRFDW AA PLHGGA     LGIHAH+QQ QKP+GF
Sbjct: 101 FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 160

Query: 121 FGGPASSSQLWPARPPIMGQQPAVGRLTAAVSGRNFVRFDDVAGWSPIGASNAG-----N 180
           F GP  +SQLWP R   MGQQPAVGRLT  + GRNF RFDDVAGW  IG+SNAG     N
Sbjct: 161 FSGPGPTSQLWP-RTLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN 220

Query: 181 VSVVNSQTKQDQDHQTNFLDLSLKL 187
           VS+V+SQTKQDQD QTNFLDLSLKL
Sbjct: 221 VSIVHSQTKQDQD-QTNFLDLSLKL 242

[Close]

BLAST of Sed0014540 vs. ExPASy TrEMBL
Match: A0A5A7VC97 (Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003190 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.8e-65
Identity = 145/212 (68.40%), Postives = 161/212 (75.94%), Query Frame = 0


Query: 1   MEPQSGRNPFSGDG------EFSDDRSRLLDLNLSSNYSSDSTTKPRIFSCNYCQRKFFS 60
           ME  +  NPFSG+G      EFS++RS LL+L LSSN SSDST KPRIFSCNYCQRKFFS
Sbjct: 1   MESHTDGNPFSGEGEEDDEKEFSEERSSLLELQLSSNNSSDSTNKPRIFSCNYCQRKFFS 60

Query: 61  SQALGGHQNAHKRERTLAKRVQRFDWAAATPLHGGA------LGIHAHAQQFQKPMG--- 120
           SQALGGHQNAHKRERTLAKRVQ+FDWAAA PLHGGA      LG+HAH+QQ QKP     
Sbjct: 61  SQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGLHAHSQQIQKPPAVGL 120

Query: 121 FFG--GPASSSQLWPARPPIMGQQPAVGRLTAAVSGRNFVRFDDVAGWSPIGASNAGNVS 180
           FFG  GP+S SQLWP RP  MGQQPAVGRL A + GRNF R+DDVA W+ IG SNAGN S
Sbjct: 121 FFGGAGPSSGSQLWP-RPMFMGQQPAVGRLMAELGGRNFGRYDDVAEWTAIGTSNAGNES 180

Query: 181 ---------VVNSQTKQDQDHQTNFLDLSLKL 187
                    +V+SQT+QD+D QTNFLDLSLKL
Sbjct: 181 RNNNNNNSNIVHSQTQQDKD-QTNFLDLSLKL 210

[Close]

BLAST of Sed0014540 vs. ExPASy TrEMBL
Match: A0A1S3BVD7 (zinc finger protein 1-like OS=Cucumis melo OX=3656 GN=LOC103493904 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.8e-65
Identity = 145/212 (68.40%), Postives = 161/212 (75.94%), Query Frame = 0


Query: 1   MEPQSGRNPFSGDG------EFSDDRSRLLDLNLSSNYSSDSTTKPRIFSCNYCQRKFFS 60
           ME  +  NPFSG+G      EFS++RS LL+L LSSN SSDST KPRIFSCNYCQRKFFS
Sbjct: 1   MESHTDGNPFSGEGEEDDEKEFSEERSSLLELQLSSNNSSDSTNKPRIFSCNYCQRKFFS 60

Query: 61  SQALGGHQNAHKRERTLAKRVQRFDWAAATPLHGGA------LGIHAHAQQFQKPMG--- 120
           SQALGGHQNAHKRERTLAKRVQ+FDWAAA PLHGGA      LG+HAH+QQ QKP     
Sbjct: 61  SQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGLHAHSQQIQKPPAVGL 120

Query: 121 FFG--GPASSSQLWPARPPIMGQQPAVGRLTAAVSGRNFVRFDDVAGWSPIGASNAGNVS 180
           FFG  GP+S SQLWP RP  MGQQPAVGRL A + GRNF R+DDVA W+ IG SNAGN S
Sbjct: 121 FFGGAGPSSGSQLWP-RPMFMGQQPAVGRLMAELGGRNFGRYDDVAEWTAIGTSNAGNES 180

Query: 181 ---------VVNSQTKQDQDHQTNFLDLSLKL 187
                    +V+SQT+QD+D QTNFLDLSLKL
Sbjct: 181 RNNNNNNSNIVHSQTQQDKD-QTNFLDLSLKL 210

[Close]

BLAST of Sed0014540 vs. ExPASy TrEMBL
Match: A0A6J1FKE2 (zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111446227 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.1e-61
Identity = 138/201 (68.66%), Postives = 148/201 (73.63%), Query Frame = 0


Query: 1   MEPQSGRNPFSGD---------GEFSDDRSRLLDLNLSSNYSSDSTTKPRIFSCNYCQRK 60
           ME Q+ + P   D         GE SDDRS +L L+L       STTKPRIFSCNYC RK
Sbjct: 1   MELQADKTPLFDDVEEDGDKKTGELSDDRSTVLGLHL-------STTKPRIFSCNYCHRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWAAAT-PLHGGA-----LGIHAHAQQFQKPMG 120
           F SSQALGGHQNAHKRERTLAKRVQRF WAAA  PLHGGA     LGIHAHAQQ QKP+G
Sbjct: 61  FISSQALGGHQNAHKRERTLAKRVQRFHWAAAAIPLHGGAFHRRSLGIHAHAQQIQKPLG 120

Query: 121 FFGGPASSSQLWPARPPIMGQQPAVGRLTAAVSGRNFVRFDDVAGWSPIGASNAGNVSVV 180
           FFGGP SS  LWP RP  MGQQPAV RLT A+ GRNF R+DDVA W  IG SNAGN ++V
Sbjct: 121 FFGGPTSSPPLWP-RPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNENIV 180

Query: 181 NSQTKQDQDHQTNFLDLSLKL 187
           +SQTKQDQ  QTNFLDLSLKL
Sbjct: 181 HSQTKQDQG-QTNFLDLSLKL 192

[Close]

BLAST of Sed0014540 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-18
Identity = 68/186 (36.56%), Postives = 96/186 (51.61%), Query Frame = 0


Query: 28  LSSNYSSDSTTKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQRFDWAAA---- 87
           ++ +++  ++T+ ++FSCNYCQR F+SSQALGGHQNAHKRERTLAKR QR   AAA    
Sbjct: 89  VTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHP 148

Query: 88  -----TPLHG----GALGIHAHAQQFQKPMGFFGGPASSSQLWPARPPIMGQQPAVGRLT 147
                 P HG      LGI AH+    KP  +        Q+  +R P++ QQPA+ +LT
Sbjct: 149 YGFAPVPFHGQYSNRTLGIQAHSMS-HKPSSYNVYGGEYGQINWSRIPLV-QQPAIAKLT 208

Query: 148 AAVSGRN----FVRFDDVAGWSPIGASNAGNVSVV----------NSQTKQDQDHQTNFL 187
           +  +  N     +     +    IG  + G + V               K  ++ +   L
Sbjct: 209 STENHYNHHQMMIAPPLTSTCENIGRFDVGRIPVEFPTSELWQRGEELLKPAEEEKQKNL 268

[Close]

BLAST of Sed0014540 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16
Identity = 67/183 (36.61%), Postives = 90/183 (49.18%), Query Frame = 0


Query: 32  YSSDSTTKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR----------------- 91
           +  +    PR+FSCNYCQRKF+SSQALGGHQNAHKRERTLAKR                 
Sbjct: 57  HQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFA 116

Query: 92  -----VQRFDWAAATPLHG-----GALGIHAHAQQFQKPMGFFGGPASSSQLWPARPPIM 151
                V RF   A+ PLHG       LGI AH+    KP  F G   +S  L       +
Sbjct: 117 FGHGSVSRFASMASLPLHGSVNNRSTLGIQAHS-TIHKP-SFLGRQTTS--LSHVFKQSI 176

Query: 152 GQQPAVGRLTAAVSGRNFVRFD-DVAGWSPIGASNAGNVSVVNSQTKQDQDHQTNFLDLS 187
            Q+P +G++          +F  +VAG +      A    + + ++ Q+  +Q   +DL+
Sbjct: 177 HQKPTIGKMLPE-------KFHLEVAGNNNSNMVAAKLERIGHFKSNQEDHNQFKKIDLT 228

[Close]

BLAST of Sed0014540 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 82.4 bits (202), Expect = 4.2e-16
Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 34  SDSTTKPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQRFDWAAAT--------- 93
           S ++T+ ++FSCNYCQR F+SSQALGGHQNAHKRERTLAKR QR   +A+          
Sbjct: 52  STTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSP 111

Query: 94  -PLHG-----GALGIHAHAQQFQKPMGFFGGPASSSQLWPARPPIMGQQPAVGR 133
            P HG      +LGI AH+    K   + G      Q+  +R P   QQPA+G+
Sbjct: 112 LPFHGQYNNHRSLGIQAHSIS-HKLSSYNGFGGHYGQINWSRLP-FDQQPAIGK 163

[Close]

BLAST of Sed0014540 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 77.8 bits (190), Expect = 1.0e-14
Identity = 46/89 (51.69%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 18  DDRSRLLDLNLSSNYSSDS---------TTKPRIFSCNYCQRKFFSSQALGGHQNAHKRE 77
           D  S  L L LSS   S +         +   R+FSCNYCQRKF+SSQALGGHQNAHKRE
Sbjct: 51  DLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRE 110

Query: 78  RTLAKRVQRFDWAAATPLHGGALGIHAHA 98
           RTLAKR  R   A   P  G +    A A
Sbjct: 111 RTLAKRAMRMGLAGVFPGRGSSSNYAAAA 139

[Close]

BLAST of Sed0014540 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 24 LDLNLSSNYSSDSTT-----KPRIFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR 75
          LDL L+  ++ D+ +      PR+FSCNYC+RKF+SSQALGGHQNAHKRERT+AKR
Sbjct: 35 LDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR 90

The following BLAST results are available for this feature:

BLAST of Sed0014540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936656.1	8.6e-72	74.63	zinc finger protein 1-like [Cucurbita moschata]	[more]
KAG6591545.1	8.6e-72	74.63	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7024430.1	8.6e-72	74.63	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022976191.1	7.3e-71	74.15	zinc finger protein 1-like [Cucurbita maxima]	[more]
XP_023536424.1	2.1e-70	73.66	zinc finger protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0014540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42485	1.5e-15	36.61	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39262	5.9e-15	46.49	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39263	1.4e-13	51.69	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39266	1.9e-13	64.29	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39261	9.4e-13	76.09	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Sed0014540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F839	4.1e-72	74.63	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV...	[more]
A0A6J1IG94	3.5e-71	74.15	zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1	[more]
A0A5A7VC97	3.8e-65	68.40	Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BVD7	3.8e-65	68.40	zinc finger protein 1-like OS=Cucumis melo OX=3656 GN=LOC103493904 PE=4 SV=1	[more]
A0A6J1FKE2	1.1e-61	68.66	zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111446227 PE=4 SV...	[more]

BLAST of Sed0014540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10970.1	1.2e-18	36.56	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G80730.1	1.1e-16	36.61	zinc-finger protein 1	[more]
AT5G25160.1	4.2e-16	46.49	zinc finger protein 3	[more]
AT1G66140.1	1.0e-14	51.69	zinc finger protein 4	[more]
AT1G24625.1	1.3e-14	64.29	zinc finger protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 20..83 e-value: 7.1E-7 score: 30.9
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 30..186
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 45..65
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 43..70 score: 11.343733
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 39..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014540.1	Sed0014540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane