Sed0014460 (gene) Chayote v1

Overview


Name	Sed0014460
Type	gene
Organism	Sechium edule (Chayote v1)
Description	VQ motif-containing protein
Location	LG10: 1794164 .. 1795014 (-)
RNA-Seq Expression	Sed0014460
Synteny	Sed0014460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAAATTCACATTGAAATTTCACCAAAAACTTCTCTGTTTTTCTCTCAAAAAAACCCATCAATGAAAATCTCTCCAAGACCCCACCAAAATCCCACCGCCGCCGATAAACTCCGACCACCGCCGCAACAGCCACCCAAAATCCTCAACCGATCCGAACCCACAAACCCGTACCCGACCACGTTCGTCCAAGCCGACACCTCATCCTTCAAACAAGTAGTTCAAATGCTCACCGGATCCCCCGAAACCGCCAAGCAAATATCCACACCCGACCCGCCTTCCAAAACCCACATCCCGCCGATTAAATCCATTCCCAAACGCCCCAATTTCAAGCTCTACGAGCGTAGAAATGTCCTTAATGCCCTCCAAATCAGCCCCCGTTTGGCCGGAATCTCGCCGGAGATTCTGTCTCCGAGCATGCTGGATTTCCCGGCGCTGGTCCTCAGCCCTGTTACGCCGCTCAATCCCGACCCCTTCGGCCGATCGCAGCCGTTGAACAATGCCGGTAATGATCCGGCGGTGGAGGAGGAAGTTGAGGCTAAAGCCATTAAAGAAAAGGGATTTTATTTGCACCCGTCGCCGGCCACCACTCCTAGAGAGTCGGAGCTGAAGCTTTTGCCTCTGTTTCCGATCACTTCCCCGAGAGATCAGCCGGGTTCTTCTTGAATTTATTTGGATTTTAAGGTATTAATTAATTTAATGTTGTGGTTGATTTTTTTCATTTCAATTTTGGTTTTTTTTTTAATGTTTTGGGAATTTGAATCGGCGATGCTAAGGAGAGGAATCTGTAATTGGGTTTAATTGCTGAGAATTGAAAAATCTGATGCTTCAATTGTAAAATTTGATGGGTT

mRNA sequence

CAACAAATTCACATTGAAATTTCACCAAAAACTTCTCTGTTTTTCTCTCAAAAAAACCCATCAATGAAAATCTCTCCAAGACCCCACCAAAATCCCACCGCCGCCGATAAACTCCGACCACCGCCGCAACAGCCACCCAAAATCCTCAACCGATCCGAACCCACAAACCCGTACCCGACCACGTTCGTCCAAGCCGACACCTCATCCTTCAAACAAGTAGTTCAAATGCTCACCGGATCCCCCGAAACCGCCAAGCAAATATCCACACCCGACCCGCCTTCCAAAACCCACATCCCGCCGATTAAATCCATTCCCAAACGCCCCAATTTCAAGCTCTACGAGCGTAGAAATGTCCTTAATGCCCTCCAAATCAGCCCCCGTTTGGCCGGAATCTCGCCGGAGATTCTGTCTCCGAGCATGCTGGATTTCCCGGCGCTGGTCCTCAGCCCTGTTACGCCGCTCAATCCCGACCCCTTCGGCCGATCGCAGCCGTTGAACAATGCCGGTAATGATCCGGCGGTGGAGGAGGAAGTTGAGGCTAAAGCCATTAAAGAAAAGGGATTTTATTTGCACCCGTCGCCGGCCACCACTCCTAGAGAGTCGGAGCTGAAGCTTTTGCCTCTGTTTCCGATCACTTCCCCGAGAGATCAGCCGGGTTCTTCTTGAATTTATTTGGATTTTAAGGTATTAATTAATTTAATGTTGTGGTTGATTTTTTTCATTTCAATTTTGGTTTTTTTTTTAATGTTTTGGGAATTTGAATCGGCGATGCTAAGGAGAGGAATCTGTAATTGGGTTTAATTGCTGAGAATTGAAAAATCTGATGCTTCAATTGTAAAATTTGATGGGTT

Coding sequence (CDS)

ATGAAAATCTCTCCAAGACCCCACCAAAATCCCACCGCCGCCGATAAACTCCGACCACCGCCGCAACAGCCACCCAAAATCCTCAACCGATCCGAACCCACAAACCCGTACCCGACCACGTTCGTCCAAGCCGACACCTCATCCTTCAAACAAGTAGTTCAAATGCTCACCGGATCCCCCGAAACCGCCAAGCAAATATCCACACCCGACCCGCCTTCCAAAACCCACATCCCGCCGATTAAATCCATTCCCAAACGCCCCAATTTCAAGCTCTACGAGCGTAGAAATGTCCTTAATGCCCTCCAAATCAGCCCCCGTTTGGCCGGAATCTCGCCGGAGATTCTGTCTCCGAGCATGCTGGATTTCCCGGCGCTGGTCCTCAGCCCTGTTACGCCGCTCAATCCCGACCCCTTCGGCCGATCGCAGCCGTTGAACAATGCCGGTAATGATCCGGCGGTGGAGGAGGAAGTTGAGGCTAAAGCCATTAAAGAAAAGGGATTTTATTTGCACCCGTCGCCGGCCACCACTCCTAGAGAGTCGGAGCTGAAGCTTTTGCCTCTGTTTCCGATCACTTCCCCGAGAGATCAGCCGGGTTCTTCTTGA

Protein sequence

MKISPRPHQNPTAADKLRPPPQQPPKILNRSEPTNPYPTTFVQADTSSFKQVVQMLTGSPETAKQISTPDPPSKTHIPPIKSIPKRPNFKLYERRNVLNALQISPRLAGISPEILSPSMLDFPALVLSPVTPLNPDPFGRSQPLNNAGNDPAVEEEVEAKAIKEKGFYLHPSPATTPRESELKLLPLFPITSPRDQPGSS

Homology

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BLAST of Sed0014460 vs. NCBI nr
Match: KAG7034597.1 (VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-67
Identity = 146/203 (71.92%), Postives = 162/203 (79.80%), Query Frame = 0


Query: 12  TAADKLRPPPQQPPKILNRSEPTNPYPTTFVQADTSSFKQVVQMLTGSPETAKQISTPDP 71
           TAAD+  PPP  PPK++NRSE TNPYPTTFVQADTSSFKQVVQMLTGSPETAKQ+STPDP
Sbjct: 13  TAADEPLPPPPPPPKMMNRSESTNPYPTTFVQADTSSFKQVVQMLTGSPETAKQVSTPDP 72

Query: 72  PSKTHIPPIKSIPKRP--NFKLYERRNVLNALQISPRLAGIS--------PEILSPSMLD 131
           PSKTHI  IKSIP+RP  NFKLYERRN L  LQI+P  A ++        PEI SPSMLD
Sbjct: 73  PSKTHIHSIKSIPQRPHSNFKLYERRNALRNLQINPVFASVTASFSPRNHPEIHSPSMLD 132

Query: 132 FPALVLSPVTPLNPDPFGRSQPL-----NNAGNDPAVEEEVEAKAIKEKGFYLHPSPATT 191
           FP+LV+SPVTPL PDPFGRSQPL     NN  ++P ++ E EA AI+EKGFYLHPSP TT
Sbjct: 133 FPSLVISPVTPLIPDPFGRSQPLNSESSNNVSSNPGLDVEAEANAIREKGFYLHPSPTTT 192

Query: 192 PRESELKLLPLFPITS-PRDQPG 199
           PRESE +LLPLFPITS PR  PG
Sbjct: 193 PRESEPQLLPLFPITSPPRPGPG 215

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BLAST of Sed0014460 vs. NCBI nr
Match: XP_023003679.1 (VQ motif-containing protein 4-like [Cucurbita maxima])

HSP 1 Score: 264.2 bits (674), Expect = 8.9e-67
Identity = 152/220 (69.09%), Postives = 169/220 (76.82%), Query Frame = 0


Query: 1   MKISPRPHQ-----NPTAADKLRPPPQQPP--KILNRSEPTNPYPTTFVQADTSSFKQVV 60
           MKISPRPHQ       TAA+ L+PPP   P  +I NRSE  NPYP TFVQADTSSFK+VV
Sbjct: 1   MKISPRPHQKSTNTTTTAANGLQPPPSPSPTTRITNRSESANPYPATFVQADTSSFKEVV 60

Query: 61  QMLTGSPETAKQISTPDPPSKTHIPPIKSIPKRPN--FKLYERRNVLNALQISPRLAGIS 120
           QMLTGSPETAKQISTP    KTHIPPIKSIPKR +  FKLYERRN+LN  QISP  A ++
Sbjct: 61  QMLTGSPETAKQISTP----KTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLT 120

Query: 121 --------PEILSPSMLDFPALVLSPVTPLNPDPFGRSQPL-----NNAGNDPAVEEEVE 180
                   PEILSP+MLDFP+LVLSPVTPL PDPF R+QPL     NN   +P V+E+ E
Sbjct: 121 AGFSPRNYPEILSPTMLDFPSLVLSPVTPLIPDPFRRTQPLNCEPSNNITINPPVDEQAE 180

Query: 181 AKAIKEKGFYLHPSPATTPRESELKLLPLFPITSPRDQPG 199
           AKAI+EKGFYLHPSPATTPRESE +LLPLFP+TSP DQPG
Sbjct: 181 AKAIREKGFYLHPSPATTPRESEPQLLPLFPVTSPGDQPG 216

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BLAST of Sed0014460 vs. NCBI nr
Match: XP_022925670.1 (VQ motif-containing protein 4-like, partial [Cucurbita moschata])

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-66
Identity = 142/198 (71.72%), Postives = 160/198 (80.81%), Query Frame = 0


Query: 17  LRPPPQQPPKILNRSEPTNPYPTTFVQADTSSFKQVVQMLTGSPETAKQISTPDPPSKTH 76
           ++PPP  PPK++NRSE TNPYPTTFVQA+TSSFKQVVQMLTGSPETAKQ+STPDPPSKTH
Sbjct: 41  VQPPPPPPPKMMNRSESTNPYPTTFVQANTSSFKQVVQMLTGSPETAKQVSTPDPPSKTH 100

Query: 77  IPPIKSIPKRP--NFKLYERRNVLNALQISPRLAGIS--------PEILSPSMLDFPALV 136
           IP IKSIP+RP  NFKLYERRN L  LQI+P  A ++        PEI SPSMLDFP+LV
Sbjct: 101 IPSIKSIPQRPHSNFKLYERRNALRNLQINPVFASVTAGFSPRNHPEIHSPSMLDFPSLV 160

Query: 137 LSPVTPLNPDPFGRSQPL-----NNAGNDPAVEEEVEAKAIKEKGFYLHPSPATTPRESE 196
           +SPVTPL PDPFGRSQPL     NN  ++P ++ E EA AI+EKGFYLHPSP TTPRESE
Sbjct: 161 ISPVTPLIPDPFGRSQPLNSEPSNNVSSNPGLDVEAEANAIREKGFYLHPSPTTTPRESE 220

Query: 197 LKLLPLFPITS-PRDQPG 199
            +LLPLFPITS PR  PG
Sbjct: 221 PQLLPLFPITSPPRPGPG 238

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BLAST of Sed0014460 vs. NCBI nr
Match: XP_023517089.1 (VQ motif-containing protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.5 bits (667), Expect = 5.8e-66
Identity = 152/220 (69.09%), Postives = 167/220 (75.91%), Query Frame = 0


Query: 1   MKISPRPHQNPT------AADKLRPPPQQPP--KILNRSEPTNPYPTTFVQADTSSFKQV 60
           MKISPRPHQ  T      AA+ L+PPP   P  +I NRSE  NPYP TFVQADTSSFK+V
Sbjct: 1   MKISPRPHQKSTTTTTAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKEV 60

Query: 61  VQMLTGSPETAKQISTPDPPSKTHIPPIKSIPKRPN--FKLYERRNVLNALQISPRLAGI 120
           VQMLTGSPETAKQISTP    KTHIPPIKSIPKR +  FKLYERRN+LN  QISP  A +
Sbjct: 61  VQMLTGSPETAKQISTP----KTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASL 120

Query: 121 S--------PEILSPSMLDFPALVLSPVTPLNPDPFGRSQPL-----NNAGNDPAVEEEV 180
           +        PEILSP+MLDFP LVLSPVTPL PDPF RSQPL     NN   +P V+E+ 
Sbjct: 121 TAGFSPRNYPEILSPTMLDFPTLVLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQA 180

Query: 181 EAKAIKEKGFYLHPSPATTPRESELKLLPLFPITSPRDQP 198
           EAKAI+EKGFYLHPSPATTPRESE +LLPLFP+TSP DQP
Sbjct: 181 EAKAIREKGFYLHPSPATTPRESEPQLLPLFPVTSPGDQP 216

[Close]

BLAST of Sed0014460 vs. NCBI nr
Match: KAG6594599.1 (VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 261.2 bits (666), Expect = 7.6e-66
Identity = 152/222 (68.47%), Postives = 168/222 (75.68%), Query Frame = 0


Query: 1   MKISPRPHQNPT--------AADKLRPPPQQPP--KILNRSEPTNPYPTTFVQADTSSFK 60
           MKISPRPHQ  T        AA+ L+PPP   P  +I NRSE  NPYP TFVQADTSSFK
Sbjct: 1   MKISPRPHQKSTTTTTAAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFK 60

Query: 61  QVVQMLTGSPETAKQISTPDPPSKTHIPPIKSIPKRPN--FKLYERRNVLNALQISPRLA 120
           +VVQMLTGSPETAKQISTP    KTHIPPIKSIPKR +  FKLYERRN+LN  QISP  A
Sbjct: 61  EVVQMLTGSPETAKQISTP----KTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFA 120

Query: 121 GIS--------PEILSPSMLDFPALVLSPVTPLNPDPFGRSQPL-----NNAGNDPAVEE 180
            ++        PEILSP+MLDFP+LVLSPVTPL PDPF RSQPL     NN   +P V+E
Sbjct: 121 SLTAGFSPRNYPEILSPTMLDFPSLVLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDE 180

Query: 181 EVEAKAIKEKGFYLHPSPATTPRESELKLLPLFPITSPRDQP 198
           + EAKAI+EKGFYLHPSPATTPRESE +LLPLFP+TSP DQP
Sbjct: 181 QAEAKAIREKGFYLHPSPATTPRESEPQLLPLFPVTSPGDQP 218

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BLAST of Sed0014460 vs. ExPASy Swiss-Prot
Match: Q5M750 (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.4e-45
Identity = 118/232 (50.86%), Postives = 143/232 (61.64%), Query Frame = 0


Query: 4   SPRPHQN------PTAADKLRPPPQQPPKILNRSEPTNPYPTTFVQADTSSFKQVVQMLT 63
           SPR H +       ++++  +PP      +  RSE  NPYPTTFVQADTSSFKQVVQMLT
Sbjct: 16  SPRCHNSNNSCGMSSSSESNKPPTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQMLT 75

Query: 64  GSPETAKQIST---------PDP---PSKTHIPPIKSIPKR-------PNFKLYERRNVL 123
           GS E  K  S+         PDP   PS   IPPIK++P +         F+LYERRN +
Sbjct: 76  GSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSM 135

Query: 124 NALQISP----------RLAGISPEILSPSMLDFPALVLSPVTPLNPDPFGRSQPLNNAG 183
             L+I+P            +   PEILSPS+LDFP+LVLSPVTPL PDPF RS   N + 
Sbjct: 136 KNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSPVTPLIPDPFDRSGSSNQSP 195

Query: 184 NDPAVEEEVEAKAIKEKGFYLHPSPATTPRESELKLLPLFPITSPRDQPGSS 201
           N+ A EE    KA+KE+GFYLHPSPATTP + E +LLPLFP+TSPR    SS
Sbjct: 196 NELAAEE----KAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSPRVSGSSS 243

[Close]

BLAST of Sed0014460 vs. ExPASy Swiss-Prot
Match: Q9LDZ1 (VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29
Identity = 95/204 (46.57%), Postives = 116/204 (56.86%), Query Frame = 0


Query: 27  ILNRSEPTNPYPTTFVQADTSSFKQVVQMLTG-----SPETAKQISTPDPPSKTHIPPIK 86
           I+ RS+    YPTTFVQAD+SSFKQVVQMLTG     SP++ +  +TP       IPPIK
Sbjct: 28  IITRSD---HYPTTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKGNFVIPPIK 87

Query: 87  SI--PKRPNFKLYERR-------NVLNALQI-----------SPRLAGISPEILSPSMLD 146
           +    K    KLYERR       N+ N+L I           SPR +  + EILSPS LD
Sbjct: 88  TAQPKKHSGNKLYERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCLD 147

Query: 147 FPALVL-SPVTPLNP-------DPFGRSQPLNNAGNDPAVEEEVEAKAIKEKGFYLHPSP 198
           FP L L SPVTPL         DPF +  PL+            E + I +KG+YLH SP
Sbjct: 148 FPKLALNSPVTPLKQGTNGNEGDPFDKMSPLSE-----------EERGIADKGYYLHRSP 207

[Close]

BLAST of Sed0014460 vs. ExPASy Swiss-Prot
Match: Q9FHZ3 (VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-29
Identity = 106/241 (43.98%), Postives = 127/241 (52.70%), Query Frame = 0


Query: 1   MKISPRPHQNP---TAADKLRPPPQQPPKILNRSEPTNPYPTTFVQADTSSFKQVVQMLT 60
           M   P   QNP    ++ + +P    P         +NPYPTTFVQADTS+FKQVVQMLT
Sbjct: 8   MSSKPEQMQNPPPMISSPRFQPQIISPHHHDQHQHLSNPYPTTFVQADTSTFKQVVQMLT 67

Query: 61  GS---PETAKQISTPDPPSKTH------IPPIKSIPKRPNFKLYERRN-----------V 120
           GS     T K    P P +  +      IPPIK   K  +FKLYERR            +
Sbjct: 68  GSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIK---KTNSFKLYERRQNNNNMFAKNDLM 127

Query: 121 LNALQI---------------------SPRLAGISPEI-LSPSMLDFPALVL-SPVTPL- 180
           +N L++                     SPR +  S  I LSPSMLDFP L L SPVTPL 
Sbjct: 128 INTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSPSMLDFPKLGLNSPVTPLR 187

Query: 181 -NPDPFGRSQPLNNAGNDPAVEEEVEAKAIKEKGFYLHPSPATTPRESELKLLPLFPITS 194
            N DPF +S PL + GN        E KAI +KGFYLHPSP +TPR+S+  LLPLFP+ S
Sbjct: 188 SNDDPFNKSSPL-SLGN-----SSEEDKAIADKGFYLHPSPVSTPRDSQPLLLPLFPVAS 239

[Close]

BLAST of Sed0014460 vs. ExPASy Swiss-Prot
Match: O23660 (VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.2e-28
Identity = 91/206 (44.17%), Postives = 124/206 (60.19%), Query Frame = 0


Query: 1   MKISPRPHQNPTAADKLRPPPQQPPKILNRSEPTNPYPTTFVQADTSSFKQVVQMLTGSP 60
           M+ SPR       A  L P P        R    + Y TTF++ D SSFKQVVQ+LTG P
Sbjct: 1   MEKSPRYRDK---AKNLLPSPSSCTTTPTRYVKDDMYETTFIRTDPSSFKQVVQLLTGIP 60

Query: 61  ETAKQISTPDPPSKTHIPPIKSIPKR---PNFKLYERRNVL-NALQISPRLAGISPEILS 120
           +       P  P    IPPIK++  +    +F+L ERRN + + L I+P  +G  PEIL+
Sbjct: 61  KNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSERRNSMKHYLNINPTHSG-PPEILT 120

Query: 121 PSMLDFPALVLSPVTPLNPDPFGRSQPLNNAGND--PAVEEEVEAKAIKEKGFYLHPSPA 180
           P++L+FPAL LSP TPL  DPF R    + + +D  P+ +++ E ++IKEKGFYL PSP+
Sbjct: 121 PTILNFPALDLSPDTPLMSDPFYRPGSFSQSPSDSKPSFDDDQE-RSIKEKGFYLRPSPS 180

Query: 181 TTPRESELKLLPLFPIT---SPRDQP 198
           TTPR++E +LL LFP+T   SP   P
Sbjct: 181 TTPRDTEPRLLSLFPMTPIHSPAPSP 201

[Close]

BLAST of Sed0014460 vs. ExPASy Swiss-Prot
Match: Q9FNP0 (VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.1e-14
Identity = 58/157 (36.94%), Postives = 79/157 (50.32%), Query Frame = 0


Query: 39  TTFVQADTSSFKQVVQMLTGSPETAKQISTPDPP-SKTHIPPIKSIPKRPNFKLYERRNV 98
           TTFVQ DT++F+++VQ LTG  E     +TP+    KT      +I KRP  KL+ERR  
Sbjct: 17  TTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKT------AIQKRPTSKLHERRQC 76

Query: 99  LN-ALQISPRLAGISPEILSPSMLDFPALVLSPVTPLNPDPFGRSQPLNNAGNDPAVEEE 158
           +   L+I        P   +PS       +L+         F     +    +      E
Sbjct: 77  MRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPDSCTTNIE 136

Query: 159 VEAKAIKEKGFYLHPSPATTPRESELKLLPLFPITSP 194
            E KAIKE+ FYLHPSP + P  +E +LL LFP+TSP
Sbjct: 137 EEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP 167

[Close]

BLAST of Sed0014460 vs. ExPASy TrEMBL
Match: A0A6J1KU05 (VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111497201 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.3e-67
Identity = 152/220 (69.09%), Postives = 169/220 (76.82%), Query Frame = 0


Query: 1   MKISPRPHQ-----NPTAADKLRPPPQQPP--KILNRSEPTNPYPTTFVQADTSSFKQVV 60
           MKISPRPHQ       TAA+ L+PPP   P  +I NRSE  NPYP TFVQADTSSFK+VV
Sbjct: 1   MKISPRPHQKSTNTTTTAANGLQPPPSPSPTTRITNRSESANPYPATFVQADTSSFKEVV 60

Query: 61  QMLTGSPETAKQISTPDPPSKTHIPPIKSIPKRPN--FKLYERRNVLNALQISPRLAGIS 120
           QMLTGSPETAKQISTP    KTHIPPIKSIPKR +  FKLYERRN+LN  QISP  A ++
Sbjct: 61  QMLTGSPETAKQISTP----KTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFASLT 120

Query: 121 --------PEILSPSMLDFPALVLSPVTPLNPDPFGRSQPL-----NNAGNDPAVEEEVE 180
                   PEILSP+MLDFP+LVLSPVTPL PDPF R+QPL     NN   +P V+E+ E
Sbjct: 121 AGFSPRNYPEILSPTMLDFPSLVLSPVTPLIPDPFRRTQPLNCEPSNNITINPPVDEQAE 180

Query: 181 AKAIKEKGFYLHPSPATTPRESELKLLPLFPITSPRDQPG 199
           AKAI+EKGFYLHPSPATTPRESE +LLPLFP+TSP DQPG
Sbjct: 181 AKAIREKGFYLHPSPATTPRESEPQLLPLFPVTSPGDQPG 216

[Close]

BLAST of Sed0014460 vs. ExPASy TrEMBL
Match: A0A6J1EIU9 (VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433020 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 7.4e-67
Identity = 142/198 (71.72%), Postives = 160/198 (80.81%), Query Frame = 0


Query: 17  LRPPPQQPPKILNRSEPTNPYPTTFVQADTSSFKQVVQMLTGSPETAKQISTPDPPSKTH 76
           ++PPP  PPK++NRSE TNPYPTTFVQA+TSSFKQVVQMLTGSPETAKQ+STPDPPSKTH
Sbjct: 41  VQPPPPPPPKMMNRSESTNPYPTTFVQANTSSFKQVVQMLTGSPETAKQVSTPDPPSKTH 100

Query: 77  IPPIKSIPKRP--NFKLYERRNVLNALQISPRLAGIS--------PEILSPSMLDFPALV 136
           IP IKSIP+RP  NFKLYERRN L  LQI+P  A ++        PEI SPSMLDFP+LV
Sbjct: 101 IPSIKSIPQRPHSNFKLYERRNALRNLQINPVFASVTAGFSPRNHPEIHSPSMLDFPSLV 160

Query: 137 LSPVTPLNPDPFGRSQPL-----NNAGNDPAVEEEVEAKAIKEKGFYLHPSPATTPRESE 196
           +SPVTPL PDPFGRSQPL     NN  ++P ++ E EA AI+EKGFYLHPSP TTPRESE
Sbjct: 161 ISPVTPLIPDPFGRSQPLNSEPSNNVSSNPGLDVEAEANAIREKGFYLHPSPTTTPRESE 220

Query: 197 LKLLPLFPITS-PRDQPG 199
            +LLPLFPITS PR  PG
Sbjct: 221 PQLLPLFPITSPPRPGPG 238

[Close]

BLAST of Sed0014460 vs. ExPASy TrEMBL
Match: A0A6J1EM47 (VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433810 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 4.8e-66
Identity = 151/221 (68.33%), Postives = 168/221 (76.02%), Query Frame = 0


Query: 1   MKISPRPHQNPT-------AADKLRPPPQQPP--KILNRSEPTNPYPTTFVQADTSSFKQ 60
           MKISPRPHQ  T       AA+ L+PPP   P  +I NRSE  NPYP TFVQADTSSFK+
Sbjct: 1   MKISPRPHQKSTTTTTAAAAANGLQPPPPPSPTTRITNRSESANPYPATFVQADTSSFKE 60

Query: 61  VVQMLTGSPETAKQISTPDPPSKTHIPPIKSIPKRPN--FKLYERRNVLNALQISPRLAG 120
           VVQMLTGSPETAKQISTP    KTHIPPIKSIPKR +  FKLYERRN+LN  QISP  A 
Sbjct: 61  VVQMLTGSPETAKQISTP----KTHIPPIKSIPKRQHSTFKLYERRNLLNNFQISPVFAS 120

Query: 121 IS--------PEILSPSMLDFPALVLSPVTPLNPDPFGRSQPL-----NNAGNDPAVEEE 180
           ++        PEILSP+MLDFP+L+LSPVTPL PDPF RSQPL     NN   +P V+E+
Sbjct: 121 LTAGFSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCEPSNNITINPPVDEQ 180

Query: 181 VEAKAIKEKGFYLHPSPATTPRESELKLLPLFPITSPRDQP 198
            EAKAI+EKGFYLHPSPATTPRESE +LLPLFP+TSP DQP
Sbjct: 181 AEAKAIREKGFYLHPSPATTPRESEPQLLPLFPVTSPADQP 217

[Close]

BLAST of Sed0014460 vs. ExPASy TrEMBL
Match: A0A0A0KI33 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517410 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 4.0e-65
Identity = 147/206 (71.36%), Postives = 161/206 (78.16%), Query Frame = 0


Query: 12  TAADKLRPPPQQPPKILNRSEPTNPYPTTFVQADTSSFKQVVQMLTGSPETAKQISTPDP 71
           T AD  +PP   PPKILNRS+ TNPYPTTFVQADTSSFKQVVQMLTGSPETAKQISTPDP
Sbjct: 17  TTADAFQPP---PPKILNRSDSTNPYPTTFVQADTSSFKQVVQMLTGSPETAKQISTPDP 76

Query: 72  PSKTHIPPIKSIPKR--PNFKLYERRNVLNALQISPRLAGIS-----------PEILSPS 131
           PSK+ IPPIKSIPKR   NFKLYERRN L+ LQI   +   S           PEILSPS
Sbjct: 77  PSKSSIPPIKSIPKRQHSNFKLYERRNALHNLQIINPVFASSVSSLRHNNHNLPEILSPS 136

Query: 132 MLDFPALVLSPVTPLNPDPFGRSQPLNN------AGNDPAVEEEVEAKAIKEKGFYLHPS 191
           MLDFP+LVLSPVTPL PDPFGRSQPLN+        ++  ++EE EAKAI+EKGFYLHPS
Sbjct: 137 MLDFPSLVLSPVTPLIPDPFGRSQPLNSEPTNNVGSSNSGLDEEAEAKAIREKGFYLHPS 196

Query: 192 PATTPRESELKLLPLFPITSPRDQPG 199
           PATTPRESE +LLPLFPITSP  +PG
Sbjct: 197 PATTPRESEPELLPLFPITSP-PRPG 218

[Close]

BLAST of Sed0014460 vs. ExPASy TrEMBL
Match: A0A5D3CP65 (VQ motif-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007530 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 6.9e-65
Identity = 146/207 (70.53%), Postives = 162/207 (78.26%), Query Frame = 0


Query: 12  TAADKLRPPPQQPPKILNRSEPTNPYPTTFVQADTSSFKQVVQMLTGSPETAKQISTPDP 71
           T AD  +PP   PPKILNRS+ TNPYPTTFVQADTSSFKQVVQMLTGSPETAKQISTPDP
Sbjct: 16  TTADAFQPP---PPKILNRSDSTNPYPTTFVQADTSSFKQVVQMLTGSPETAKQISTPDP 75

Query: 72  PSKTHIPPIKSIPKR--PNFKLYERRNVLNALQISPRLAGIS-----------PEILSPS 131
           PSK+ IPPIKSIPKR   NFKLYERRN L+ LQI   +   S           PE+LSPS
Sbjct: 76  PSKSPIPPIKSIPKRQHSNFKLYERRNALHNLQIINPVFASSVSSLRNNNHNLPEVLSPS 135

Query: 132 MLDFPALVLSPVTPLNPDPFGRSQPLNN-------AGNDPAVEEEVEAKAIKEKGFYLHP 191
           MLDFP+LVLSPVTPL PDPFGRSQPLN+       + ++  ++EE EAKAI+EKGFYLHP
Sbjct: 136 MLDFPSLVLSPVTPLIPDPFGRSQPLNSEPTNNNVSSSNSGLDEEAEAKAIREKGFYLHP 195

Query: 192 SPATTPRESELKLLPLFPITSPRDQPG 199
           SPATTPRESE +LLPLFPITSP  +PG
Sbjct: 196 SPATTPRESEPELLPLFPITSP-PRPG 218

[Close]

BLAST of Sed0014460 vs. TAIR 10
Match: AT1G28280.1 (VQ motif-containing protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.4e-46
Identity = 118/232 (50.86%), Postives = 143/232 (61.64%), Query Frame = 0


Query: 4   SPRPHQN------PTAADKLRPPPQQPPKILNRSEPTNPYPTTFVQADTSSFKQVVQMLT 63
           SPR H +       ++++  +PP      +  RSE  NPYPTTFVQADTSSFKQVVQMLT
Sbjct: 16  SPRCHNSNNSCGMSSSSESNKPPTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQMLT 75

Query: 64  GSPETAKQIST---------PDP---PSKTHIPPIKSIPKR-------PNFKLYERRNVL 123
           GS E  K  S+         PDP   PS   IPPIK++P +         F+LYERRN +
Sbjct: 76  GSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSM 135

Query: 124 NALQISP----------RLAGISPEILSPSMLDFPALVLSPVTPLNPDPFGRSQPLNNAG 183
             L+I+P            +   PEILSPS+LDFP+LVLSPVTPL PDPF RS   N + 
Sbjct: 136 KNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSPVTPLIPDPFDRSGSSNQSP 195

Query: 184 NDPAVEEEVEAKAIKEKGFYLHPSPATTPRESELKLLPLFPITSPRDQPGSS 201
           N+ A EE    KA+KE+GFYLHPSPATTP + E +LLPLFP+TSPR    SS
Sbjct: 196 NELAAEE----KAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSPRVSGSSS 243

[Close]

BLAST of Sed0014460 vs. TAIR 10
Match: AT1G28280.2 (VQ motif-containing protein )

HSP 1 Score: 182.2 bits (461), Expect = 4.2e-46
Identity = 116/226 (51.33%), Postives = 141/226 (62.39%), Query Frame = 0


Query: 4   SPRPHQN------PTAADKLRPPPQQPPKILNRSEPTNPYPTTFVQADTSSFKQVVQMLT 63
           SPR H +       ++++  +PP      +  RSE  NPYPTTFVQADTSSFKQVVQMLT
Sbjct: 16  SPRCHNSNNSCGMSSSSESNKPPTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQMLT 75

Query: 64  GSPETAKQIST---------PDP---PSKTHIPPIKSIPKR-------PNFKLYERRNVL 123
           GS E  K  S+         PDP   PS   IPPIK++P +         F+LYERRN +
Sbjct: 76  GSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSM 135

Query: 124 NALQISP----------RLAGISPEILSPSMLDFPALVLSPVTPLNPDPFGRSQPLNNAG 183
             L+I+P            +   PEILSPS+LDFP+LVLSPVTPL PDPF RS   N + 
Sbjct: 136 KNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSPVTPLIPDPFDRSGSSNQSP 195

Query: 184 NDPAVEEEVEAKAIKEKGFYLHPSPATTPRESELKLLPLFPITSPR 195
           N+ A EE    KA+KE+GFYLHPSPATTP + E +LLPLFP+TSPR
Sbjct: 196 NELAAEE----KAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSPR 237

[Close]

BLAST of Sed0014460 vs. TAIR 10
Match: AT3G15300.1 (VQ motif-containing protein )

HSP 1 Score: 131.3 bits (329), Expect = 8.4e-31
Identity = 95/204 (46.57%), Postives = 116/204 (56.86%), Query Frame = 0


Query: 27  ILNRSEPTNPYPTTFVQADTSSFKQVVQMLTG-----SPETAKQISTPDPPSKTHIPPIK 86
           I+ RS+    YPTTFVQAD+SSFKQVVQMLTG     SP++ +  +TP       IPPIK
Sbjct: 28  IITRSD---HYPTTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKGNFVIPPIK 87

Query: 87  SI--PKRPNFKLYERR-------NVLNALQI-----------SPRLAGISPEILSPSMLD 146
           +    K    KLYERR       N+ N+L I           SPR +  + EILSPS LD
Sbjct: 88  TAQPKKHSGNKLYERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCLD 147

Query: 147 FPALVL-SPVTPLNP-------DPFGRSQPLNNAGNDPAVEEEVEAKAIKEKGFYLHPSP 198
           FP L L SPVTPL         DPF +  PL+            E + I +KG+YLH SP
Sbjct: 148 FPKLALNSPVTPLKQGTNGNEGDPFDKMSPLSE-----------EERGIADKGYYLHRSP 207

[Close]

BLAST of Sed0014460 vs. TAIR 10
Match: AT5G53830.1 (VQ motif-containing protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-30
Identity = 106/241 (43.98%), Postives = 127/241 (52.70%), Query Frame = 0


Query: 1   MKISPRPHQNP---TAADKLRPPPQQPPKILNRSEPTNPYPTTFVQADTSSFKQVVQMLT 60
           M   P   QNP    ++ + +P    P         +NPYPTTFVQADTS+FKQVVQMLT
Sbjct: 8   MSSKPEQMQNPPPMISSPRFQPQIISPHHHDQHQHLSNPYPTTFVQADTSTFKQVVQMLT 67

Query: 61  GS---PETAKQISTPDPPSKTH------IPPIKSIPKRPNFKLYERRN-----------V 120
           GS     T K    P P +  +      IPPIK   K  +FKLYERR            +
Sbjct: 68  GSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIK---KTNSFKLYERRQNNNNMFAKNDLM 127

Query: 121 LNALQI---------------------SPRLAGISPEI-LSPSMLDFPALVL-SPVTPL- 180
           +N L++                     SPR +  S  I LSPSMLDFP L L SPVTPL 
Sbjct: 128 INTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSPSMLDFPKLGLNSPVTPLR 187

Query: 181 -NPDPFGRSQPLNNAGNDPAVEEEVEAKAIKEKGFYLHPSPATTPRESELKLLPLFPITS 194
            N DPF +S PL + GN        E KAI +KGFYLHPSP +TPR+S+  LLPLFP+ S
Sbjct: 188 SNDDPFNKSSPL-SLGN-----SSEEDKAIADKGFYLHPSPVSTPRDSQPLLLPLFPVAS 239

[Close]

BLAST of Sed0014460 vs. TAIR 10
Match: AT2G33780.1 (VQ motif-containing protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-29
Identity = 91/206 (44.17%), Postives = 124/206 (60.19%), Query Frame = 0


Query: 1   MKISPRPHQNPTAADKLRPPPQQPPKILNRSEPTNPYPTTFVQADTSSFKQVVQMLTGSP 60
           M+ SPR       A  L P P        R    + Y TTF++ D SSFKQVVQ+LTG P
Sbjct: 1   MEKSPRYRDK---AKNLLPSPSSCTTTPTRYVKDDMYETTFIRTDPSSFKQVVQLLTGIP 60

Query: 61  ETAKQISTPDPPSKTHIPPIKSIPKR---PNFKLYERRNVL-NALQISPRLAGISPEILS 120
           +       P  P    IPPIK++  +    +F+L ERRN + + L I+P  +G  PEIL+
Sbjct: 61  KNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSERRNSMKHYLNINPTHSG-PPEILT 120

Query: 121 PSMLDFPALVLSPVTPLNPDPFGRSQPLNNAGND--PAVEEEVEAKAIKEKGFYLHPSPA 180
           P++L+FPAL LSP TPL  DPF R    + + +D  P+ +++ E ++IKEKGFYL PSP+
Sbjct: 121 PTILNFPALDLSPDTPLMSDPFYRPGSFSQSPSDSKPSFDDDQE-RSIKEKGFYLRPSPS 180

Query: 181 TTPRESELKLLPLFPIT---SPRDQP 198
           TTPR++E +LL LFP+T   SP   P
Sbjct: 181 TTPRDTEPRLLSLFPMTPIHSPAPSP 201

The following BLAST results are available for this feature:

BLAST of Sed0014460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034597.1	1.1e-67	71.92	VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_023003679.1	8.9e-67	69.09	VQ motif-containing protein 4-like [Cucurbita maxima]	[more]
XP_022925670.1	1.5e-66	71.72	VQ motif-containing protein 4-like, partial [Cucurbita moschata]	[more]
XP_023517089.1	5.8e-66	69.09	VQ motif-containing protein 4-like [Cucurbita pepo subsp. pepo]	[more]
KAG6594599.1	7.6e-66	68.47	VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0014460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5M750	3.4e-45	50.86	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]
Q9LDZ1	1.2e-29	46.57	VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1	[more]
Q9FHZ3	2.0e-29	43.98	VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1	[more]
O23660	2.2e-28	44.17	VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1	[more]
Q9FNP0	9.1e-14	36.94	VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1	[more]

BLAST of Sed0014460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KU05	4.3e-67	69.09	VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111497201 P...	[more]
A0A6J1EIU9	7.4e-67	71.72	VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433020...	[more]
A0A6J1EM47	4.8e-66	68.33	VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433810...	[more]
A0A0A0KI33	4.0e-65	71.36	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517410 PE=4 SV=...	[more]
A0A5D3CP65	6.9e-65	70.53	VQ motif-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of Sed0014460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28280.1	2.4e-46	50.86	VQ motif-containing protein	[more]
AT1G28280.2	4.2e-46	51.33	VQ motif-containing protein	[more]
AT3G15300.1	8.4e-31	46.57	VQ motif-containing protein	[more]
AT5G53830.1	1.4e-30	43.98	VQ motif-containing protein	[more]
AT2G33780.1	1.6e-29	44.17	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 36..62 e-value: 1.3E-11 score: 43.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..85
IPR039827	VQ motif-containing protein 4/13	PANTHER	PTHR33402:SF16	VQ MOTIF-CONTAINING PROTEIN 13-RELATED	coord: 5..197
IPR039611	VQ motif-containing protein 4/11/13/19/31/33	PANTHER	PTHR33402	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 5..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014460.1	Sed0014460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus