Sed0014451 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAGCACTCCGAACGATTTCTCAGTCATCATTCTTCCTTCCGACGGCGGCGTCGATTCACGGCCGCTTTTGACCGACAAAGACAAGGGCAAGGAGTCTGGAGAGGCTGACAATTGGCACGATTGCTCTCAGAACCTCTCCTCCGATGAGGATTTCTCCGATCTCGATCTCTTGCAGTTCTTTCGTCTCCAGGGCTCCGATAGGGCTGGCAATCGCATCCTCCGCGTCGTCGGGAAGTACTTTCCTGGTATAAAAAATACGATTCCGTTTGATGAATTTTGTTGGTTTCGTTGTTTTGGATTTCCAGAAGTTGAGGGATTTTCATGGAAATGTTTTTTCATTAGTTCTCATTCTTTTGCTTCATTGAACAGTTTATGCCCGGATTGATAATTATTTGGTTTTTTTTTTTTCGTTTTTGAAATTTAAGCCTACACCTTACTGCTACCTTACTACATGTTTTTTGTTACTCAGATGTAAGTCTTACCGATATTTTTAGAAATTAAACTAAAATTTGAAAACAAAAAAACAGTAGCTTCTTTTGTTTTTAAAAGTTGGCTAGAATATACATGTTTTCTTTAAGGAAAGATATATATATATATATATCGTAGGAAAGGTGAAACACATCCTAGAAAGTTTAGGCCTAAGTTTCAATAACCAAAACAAAAAACCAAATGGTTATCAAACGGGGTCTTAAATTTCGGCCTTATTATTTGATTCAGGATTGTCTATCGAATAATTGAGATAGGGTCGATGGGCTGTTTTGTTATTGACTTCTGACTTCTGAGTATGTTCTTAGCTTAAACAATAAGTTTGATACTTCAATTTTTGTATCTTTTGGTACTTTATTTTTTAGTTCAACTACTGCAGAGTATGGGAATTGAACCATATAGTAATGGGTGGTTTGGCTGTTTTTGTATCTATTTAAGCAGGTCCTTTAAACTTCCATACTTGTAGCTACGAAGTGAACTAAATTTCTAGGCACATAACTTCCAATTCGACATCTAATTAATTATCTTCTTAAACTGTTTCAGTTTAAAAAACAGTTTAAGAATTTTGAGACCTACTAGAGAAGGAATAGCAAGTTGGACTAATTAGCAAGAAAGGTTCTTGAGAAATTTATATCTAACCCCTTCCTAACTTTTTAAAAAAAAATTTCTAATTTTTTATATCTGTGACTTTCCCGGTCCAGAAATTTAATTTCAAAGTAGAGGTGGCCACCATAGATCGATCCTATCGACTCTTAGCTCCTTAAGGCCCTCTTGACCACTAGACTGGATTATTACCACTCTCTAATAGTGGCGTGTTGTGTTCATGGTTAGTCTTTGCTTTTATCTTCTATAAACTATAGGATAACAATTCATGAGCATATCTTCTCTTTATGACTCCGTAAAACAGAGGTCACAAACTTCTGTTTAGATGTACTGTTTAATTTGTTCTTATATCAGAATTTATATTTCTTCATTTTTTTCCTTGAAATTTCTTCTTGATCTTTTTTACACAGCTGTGGTTATTAGCGGAGAGCGGCTGAAGAAATATATCCTCCACAAATTCTGCAGCGAATTGTCAGAAGGTCCTTTTTGTGTTGTGTACTTCAATACATCGGCGCAGAAGGATGATAATTGCCCAGGCTTAACCATTTTGAGGTGGATTTATGAAGAACTTCCATCTGATTTCAAGGATAGACTTCAAGTTCTCTACTTTGTACATCCTGGACTTCGTTCAAGGCTTGTTTTGGCAACTCTTGGCCGTTTTTTCCTGAGTGGTGGGTGAGTGCATTTGCTGTAATGATTTTCGAATTTAACTAACGCTTGTAAGTGTTGTGATTTGCTTTTTTTCTTTAGTTAAACGACTATGATTGAACTAGAGTACTGTTGAATAATTTATCTCTCTGTACCTAACTGCATTGCTCATAAGTCATAAGATCGAATGTTTTATTAACTTAAAGCTATTTGTTTACCTTTTTCCTTTTAATTGATGTACAGTATGTTTTGTTAACCGAATGAAAGGACCTTGAACATGATCTGTTCTATAGGTATAGGTTGTATACCGTGTCCTTGAATTATAAGAATATTCTACAAGCAGATAAAAAAAAGGGAAGAAACAAAAAACAATTCTTCAATTGTTGGGTTCTATTCGCATAGTAGTCCTTAGAAACTTTTAGCGTCTGTAAAAACGTTTTTTTTCAAGGGCATTATAATATGAAGCTTATTGAAACTATCATCTTGAGTAGTAAGAACTATGAACTAGGAAGAACAGTTGGCATGACTGATTTGGGTGTTTGTTTGTGCTATATTTTTCATCTAATGTGCATATCTTGAATAATTGATAATGCCTTGAAAACATTACGTACATATAAATTTTGTGTGATTCGTTCTGAGATTTCTTCTCTTTTGATAGATTGTACTGGAAAATCAAGTATGTGAGCCGCCTTCAGTACCTTTCAGAAGATATAAAGAAGGGAGAGGTTGAGATTCCTGATTTCGTGAAAAGTCACGATGAAGTTCTTGAACACCGACCGCTAACAGATTACGGCATCGAGCCTGATTCTCTTAACGTCACTGAGGCACCTTATTCTGCCCACTCCTTTGGGAGATATGAAGAGAGATGGATGTCAAGGCAGAGTATGACCTAG ATGGGCAGCACTCCGAACGATTTCTCAGTCATCATTCTTCCTTCCGACGGCGGCGTCGATTCACGGCCGCTTTTGACCGACAAAGACAAGGGCAAGGAGTCTGGAGAGGCTGACAATTGGCACGATTGCTCTCAGAACCTCTCCTCCGATGAGGATTTCTCCGATCTCGATCTCTTGCAGTTCTTTCGTCTCCAGGGCTCCGATAGGGCTGGCAATCGCATCCTCCGCGTCGTCGGGAAGTACTTTCCTGCTGTGGTTATTAGCGGAGAGCGGCTGAAGAAATATATCCTCCACAAATTCTGCAGCGAATTGTCAGAAGGTCCTTTTTGTGTTGTGTACTTCAATACATCGGCGCAGAAGGATGATAATTGCCCAGGCTTAACCATTTTGAGGTGGATTTATGAAGAACTTCCATCTGATTTCAAGGATAGACTTCAAGTTCTCTACTTTGTACATCCTGGACTTCGTTCAAGGCTTGTTTTGGCAACTCTTGGCCGTTTTTTCCTGAGTGGTGGATTGTACTGGAAAATCAAGTATGTGAGCCGCCTTCAGTACCTTTCAGAAGATATAAAGAAGGGAGAGGTTGAGATTCCTGATTTCGTGAAAAGTCACGATGAAGTTCTTGAACACCGACCGCTAACAGATTACGGCATCGAGCCTGATTCTCTTAACGTCACTGAGGCACCTTATTCTGCCCACTCCTTTGGGAGATATGAAGAGAGATGGATGTCAAGGCAGAGTATGACCTAG ATGGGCAGCACTCCGAACGATTTCTCAGTCATCATTCTTCCTTCCGACGGCGGCGTCGATTCACGGCCGCTTTTGACCGACAAAGACAAGGGCAAGGAGTCTGGAGAGGCTGACAATTGGCACGATTGCTCTCAGAACCTCTCCTCCGATGAGGATTTCTCCGATCTCGATCTCTTGCAGTTCTTTCGTCTCCAGGGCTCCGATAGGGCTGGCAATCGCATCCTCCGCGTCGTCGGGAAGTACTTTCCTGCTGTGGTTATTAGCGGAGAGCGGCTGAAGAAATATATCCTCCACAAATTCTGCAGCGAATTGTCAGAAGGTCCTTTTTGTGTTGTGTACTTCAATACATCGGCGCAGAAGGATGATAATTGCCCAGGCTTAACCATTTTGAGGTGGATTTATGAAGAACTTCCATCTGATTTCAAGGATAGACTTCAAGTTCTCTACTTTGTACATCCTGGACTTCGTTCAAGGCTTGTTTTGGCAACTCTTGGCCGTTTTTTCCTGAGTGGTGGATTGTACTGGAAAATCAAGTATGTGAGCCGCCTTCAGTACCTTTCAGAAGATATAAAGAAGGGAGAGGTTGAGATTCCTGATTTCGTGAAAAGTCACGATGAAGTTCTTGAACACCGACCGCTAACAGATTACGGCATCGAGCCTGATTCTCTTAACGTCACTGAGGCACCTTATTCTGCCCACTCCTTTGGGAGATATGAAGAGAGATGGATGTCAAGGCAGAGTATGACCTAG MGSTPNDFSVIILPSDGGVDSRPLLTDKDKGKESGEADNWHDCSQNLSSDEDFSDLDLLQFFRLQGSDRAGNRILRVVGKYFPAVVISGERLKKYILHKFCSELSEGPFCVVYFNTSAQKDDNCPGLTILRWIYEELPSDFKDRLQVLYFVHPGLRSRLVLATLGRFFLSGGLYWKIKYVSRLQYLSEDIKKGEVEIPDFVKSHDEVLEHRPLTDYGIEPDSLNVTEAPYSAHSFGRYEERWMSRQSMT Homology
BLAST of Sed0014451 vs. NCBI nr
Match: XP_022935085.1 (ganglioside-induced differentiation-associated protein 2 [Cucurbita moschata] >XP_023527462.1 ganglioside-induced differentiation-associated protein 2 [Cucurbita pepo subsp. pepo] >KAG6580896.1 hypothetical protein SDJN03_20898, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017652.1 hypothetical protein SDJN02_19518, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 463.8 bits (1192), Expect = 9.6e-127 Identity = 223/248 (89.92%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of Sed0014451 vs. NCBI nr
Match: KAG6580899.1 (hypothetical protein SDJN03_20901, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 463.8 bits (1192), Expect = 9.6e-127 Identity = 223/248 (89.92%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of Sed0014451 vs. NCBI nr
Match: XP_022983861.1 (ganglioside-induced differentiation-associated protein 2 [Cucurbita maxima]) HSP 1 Score: 462.2 bits (1188), Expect = 2.8e-126 Identity = 222/248 (89.52%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of Sed0014451 vs. NCBI nr
Match: XP_038905531.1 (ganglioside-induced differentiation-associated protein 2 [Benincasa hispida]) HSP 1 Score: 462.2 bits (1188), Expect = 2.8e-126 Identity = 222/249 (89.16%), Postives = 235/249 (94.38%), Query Frame = 0
BLAST of Sed0014451 vs. NCBI nr
Match: XP_008443288.1 (PREDICTED: rho GTPase-activating protein 68F [Cucumis melo] >KAA0053862.1 rho GTPase-activating protein 68F [Cucumis melo var. makuwa] >TYK25541.1 rho GTPase-activating protein 68F [Cucumis melo var. makuwa]) HSP 1 Score: 460.7 bits (1184), Expect = 8.1e-126 Identity = 221/249 (88.76%), Postives = 236/249 (94.78%), Query Frame = 0
BLAST of Sed0014451 vs. ExPASy Swiss-Prot
Match: Q5CZL1 (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis OX=8364 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.5e-13 Identity = 48/155 (30.97%), Postives = 76/155 (49.03%), Query Frame = 0
BLAST of Sed0014451 vs. ExPASy Swiss-Prot
Match: Q5XGM5 (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis OX=8355 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.6e-13 Identity = 50/163 (30.67%), Postives = 81/163 (49.69%), Query Frame = 0
BLAST of Sed0014451 vs. ExPASy Swiss-Prot
Match: Q9DBL2 (Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus OX=10090 GN=Gdap2 PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12 Identity = 50/171 (29.24%), Postives = 79/171 (46.20%), Query Frame = 0
BLAST of Sed0014451 vs. ExPASy Swiss-Prot
Match: Q66H63 (Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus OX=10116 GN=Gdap2 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 4.8e-12 Identity = 48/171 (28.07%), Postives = 80/171 (46.78%), Query Frame = 0
BLAST of Sed0014451 vs. ExPASy Swiss-Prot
Match: Q9NXN4 (Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens OX=9606 GN=GDAP2 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 6.2e-12 Identity = 48/171 (28.07%), Postives = 80/171 (46.78%), Query Frame = 0
BLAST of Sed0014451 vs. ExPASy TrEMBL
Match: A0A6J1F9L3 (ganglioside-induced differentiation-associated protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111442061 PE=4 SV=1) HSP 1 Score: 463.8 bits (1192), Expect = 4.6e-127 Identity = 223/248 (89.92%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of Sed0014451 vs. ExPASy TrEMBL
Match: A0A6J1J3J8 (ganglioside-induced differentiation-associated protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111482348 PE=4 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 1.3e-126 Identity = 222/248 (89.52%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of Sed0014451 vs. ExPASy TrEMBL
Match: A0A5D3DPF9 (Rho GTPase-activating protein 68F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006930 PE=4 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 3.9e-126 Identity = 221/249 (88.76%), Postives = 236/249 (94.78%), Query Frame = 0
BLAST of Sed0014451 vs. ExPASy TrEMBL
Match: A0A1S3B7Q3 (rho GTPase-activating protein 68F OS=Cucumis melo OX=3656 GN=LOC103486907 PE=4 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 3.9e-126 Identity = 221/249 (88.76%), Postives = 236/249 (94.78%), Query Frame = 0
BLAST of Sed0014451 vs. ExPASy TrEMBL
Match: A0A6J1DW55 (ganglioside-induced differentiation-associated protein 2 OS=Momordica charantia OX=3673 GN=LOC111025008 PE=4 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 1.9e-125 Identity = 219/249 (87.95%), Postives = 237/249 (95.18%), Query Frame = 0
BLAST of Sed0014451 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein ) HSP 1 Score: 349.0 bits (894), Expect = 3.2e-96 Identity = 167/238 (70.17%), Postives = 193/238 (81.09%), Query Frame = 0
BLAST of Sed0014451 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein ) HSP 1 Score: 185.7 bits (470), Expect = 4.7e-47 Identity = 84/182 (46.15%), Postives = 124/182 (68.13%), Query Frame = 0
BLAST of Sed0014451 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein ) HSP 1 Score: 68.2 bits (165), Expect = 1.1e-11 Identity = 39/140 (27.86%), Postives = 74/140 (52.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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