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Sed0014438 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAAAACCGGGAAAAAAAAAAAAAACATTCTCATAGAAATGCAAATCCAAAACCCTTTTTTTGCTTCACTAAAACCTTCCCTTTGAGCTGTTTAAACCAGCAATGGCTCAATCCATACATCTTCTTCCTAACAACGCTACAGGTATTTGTTCTTAAGTTTCATATCCATAAATTCTCTGTTGGGTACTCTTTATTTTGGCATTTTAGTTGCATCAAAGCTGGGAAATTAAGTATTTTCATGTTTTCCCTCATTCAGTTTTTCCTTTATACTTTACTCGGATCCGTTTTTGGGTGTCTATTTTTGTGGGTTTTCTTCTTCCAATTCGTTCTACTTCAGCATCAAACATTTTCATTGAGTTCCTTGAGCTTCTTTTGATTTTGATTTTGATTTTTTGTTTTTTTTTTTTTGTGTGGGTGTGTAATTCTTCTTGGGAAGGGTTAGCATATTGGGTAATTGTCTTTTGTGCCTCTTGATTATGCATATGTTTTGTTGTTGTTTCCTTTCCTGTTTAATTGAATATGGTTGTTGAGAAATTATAGCTTTGCATTTATTGGCTTTCGTTTGGTTTTCTGTTGCGCATTTTGTTCTGTTTCTCTTTTCTTTTTTGGCATTCAACTTCAATTTTAGAGTATGCAATACCCACTTTCTAATTTCTTGAAACTTCCTTAATTTGTTGGATTACTTGACCCATTGGTTTGCTTACCTACTTGATGTTCTTGCCTTTTGGAATTGAAGTGGATATGTGCATTTCCTTTTACTCAGTTTGTGAAGGAAGGTTCAAGATGTAATGCTTGTTTTAGTTCAAACTCCACGTGGGGTGTATTCGTGTTGAGATATTCCTTGAACTCTGATGCCCCACAATTACTTAGTAGGGGGATTCATTGCTAGATCATTACGTATTCAGAGAGTGCACTATATAAACCCTCTTAAAACTCTAGCCCCCACTTGATCAACGTTCTTTATTCTGTATCTTAAAGATCAATAAAATCATTATCTCCTTGCCCGTGGGCATAGCTAATACATTGTTAGTTACCATCATGGAGTGGTTCAAGTGGTCAAAGAGGGCCTTGGGGTGCTTAAAGTAATGAGTTCAATCCATGGTGGCCAACTACCTTGGAATTAATTTCCTACGAGTTTCCTTGACATTCAAATGTTGTAGGGTCAGGTGGTATGTCCCATGACATTAGTCGAGGTGTGCGCAAGCTGGCACGGATAGTCATGGATATAAAAGAAAACACATTGTTAGTGAACCACGTAAATCATCGTATTTTGTCACATGTTTTCTTTAATGTTTATCTTGTTTGTTGTTCCAATTTCTTAACAATTCGAACCTCTTAACTTTTGGTGTTGGTTGAGGATATAATGCCTTAATCAATTGAGTTAGACCAGGTTGATGCTTTGAGATGTAATGTGTTAATATGAGATTGGGATTTCTTCACTACATGATAGAAGTTGGTAATAATGGTATGCATAATCTCAGAGCAGTATTAAAAAGATAATTCAGTTGTACTTCTGGATTTTAAGCGGCTTTTTCTTCTTAATTTAAGTTTAAAACAAGATATAAGATTAATTAGTTTCACATTACATTACTACTTCAACATATTGTTGCAAATGCTTCTCTTCTTTCTCTCACAATATAGGCTTTTCTTGAATCTGATTCGTTGCTATGCATTCTGACATTGAGTTTGCCAGTTATCAAATCCATATGGTTTCCACATCTGATGATTGTTTAAACTTTTCTCGACTTTTTTCTATATTCGTGAGTGTTCGAGTTAGCTTGTGTGTGCCTCAACTATTCTCACGGGACATACCTTATGACCTTATAACATTTGGATGTCAAAGAAATTTATAAGAAATTTATTTCTAGGTAGGTGGACACCATAAATTGAACCCACAACCTTTTGATTTCTTATTGTCCTTTTGACCAGGCGACCCATAATGGTTAATTTATGGACTTTATTGTACTTTTCTCTTGTATTATGTCCTATCGCTGTTTTCATAACCTATCTATGTGCGTCCATCTATTTGGGGAAGTGACTGACAACTATATTCTAGTTGTATACATAGAAACTGTTTTTTTTTCTCTTATTGATCACTCTACACTATTGATGCATTATTGATGTTCAAAAGTAAGCATACAGTATAGTTTGCAATCACACAATCTGATTGTAGAAATATAAGACTTTTCATATATGCTTGAATCAATAATATCTTGATTAGGCCTGTGACTGTTAAGTTATTTTCTTGACACCCTTTGCCTACAGCAAGTGGTCCTAATTGTTACTTGCCCATGCTTTTGTCCATTCAATTCATTTACATGCACAGATTACTGATTTCAGTTATAAACCTATAAATTGGTACTGCTATGAAGATAAACATAGTCGTGGCTGTCGTTTTTCTGTGGCTGAGCTAATTCTCTGTTATTGGCTGCCTTTATATTTTGTTTACAACAGTGCCTTTATATTTTGTTTAATGTAATCTTCTTTCTTTGACATTGCTATATTTCTTCTTCTTTTTTTCATTTTAAAGGCAACGTCTTTTCTTTATTTGAATGCATGGTTTCTATTGCATAGTTCTAATTTTGTGGTTTGTACTATATACCATAATGGATGTCATCAACTGTTACCCCATTTTATGATTTCTTAAAAGATGAAAAATTGTAGGTAGGTGAAGATAATGCTCTATTCTTGCTGTAGATAGCTGTTGCAAATTGGTAATTTACACCCAAATTTGCATTGAAAGTTAAAAACTGGTTCAAAACAAAAGGGTTGGGAATGAATTCGCTCTTTTTTTGCAATGTTCAGATGATTTATGCATTGAAGGAATCATATTTTTGGACTTGAATGCTCTTCTCTAATGAGTTAAGTTCTAGTCTGCTTTGTATGGTTTCTTGACATACTGGAAATTAGAGAAGCTTTTATAAATATGGAGTTTTGTTTTGATATAGGGTTTGGACTGTCAGATAGCAGATGCCTACCATGCTCTGGAGTTTCGGGACGAACATCCACGGCCTCATCTCGCTCTTTATGCGCTGAACATAAAATCAAAGCCCAGGTCAAATTCCGGCCCCTAAACTCCACTTCGTTAGGGGCTTCTTTTATGTGCAAAGCGAGCTCGGGAGGTCATAGGAGAAACCCAGATTTCTCAAAGCAAAATAGGCATGGCTTCTCACGAAGCAGCAGAAATAGGCAAAAAGAGGAAAAAGATAGCCTTGAAAATCTTGATGAATCTGATCTATTATCTTCTAAGAATGGATCATTACTTTCCATCTCTAGCACACCAAAATCACAGGCCACTGCTACCCCAGGCCCTAGGGAGAAGGAAATTGTTGAACTTTTCAGGAAGGTTCAAGCTCAGCTTCGCGAGCGAGCTGCAATGAAAGAAGAAAAGAAAACAGAGATACAAGGACAAACGGAAGGGAACAAAACGGTGGATTCGCTTCTGACGATACTGAGAAAGCAAGGGAAGAGAAGCAGTGGTAGTGGTAGTGGTGGCAGCACCAGCAGCAAGGACTTCAGTTTTAACCATGTCAAAGAGAATAGTCTATATGATGAGGGGAAAGGCGCAAGCATTTTTGGCCTAAGTGCCAGCTTGAGAGAAAAGGCTCAAGAACCAACAGGATCTTCTTCCAGTAGACCTGTATCACATTTTCAACGTAAATCCCCCGTCCCTCGGGTGAAATACCAACCGATTTACCCTGGGGAAAGTATTGTCGACTCCACCAATGGTGTGATATCAAAGGGAGTGAAATTTAATGGAATAGACACAAGTTCTCAACTGAAGGCAAAGGTATGGACTCGACAAGAGTCGGAACGAGAAGCCTGGGAAGAGCTGCAATCACAAGGAGAGATAGAGCAGGAGTCAGAGCCAGAGCAAGAGTTTGAGTTGGAGCCAGAAACTGAATCATATGTGCTAGAGCATGAACCTGACGAGATGGAGCCTGAACTCGCCAATGTATTAGGTGTGCCATCAGAAGTTGATGAAACATTTGATGAAGATGTTAAAGACAATAAGAAATTCGCAAAGCATGAGGATCACGAGGACTTGATCTCATTGAAGCTTGCTGAACTGAGGGCAATGGCCAAAGCTCGCGGCATGAAAGGCTTCTCGAAGATGAAGAAGAGCGAGCTCCTGCAGTTGCTAAGTGAAGACCAAGTATGAGAAAAGACAATGTTGGATAGGAACTTCATGGTTGTAGGATGTTTGGGTGCAATTTTGTTTTTTCTTGAATATAATCAATCTGTATTGACCAATTTTGAGTTGGAAATTAGCTTTTCAAATCTTTTCCCAGATTGTATATCAGGCTAGGTTCAGGGTGCATGTCATCAATAACAATCTCTTCTTTTACCTTTCTCATATTCAGGTGTTTGTTCACTTTTAGAAATGAATCATTTTTTAACAGCAC GAAAAAAACCGGGAAAAAAAAAAAAAACATTCTCATAGAAATGCAAATCCAAAACCCTTTTTTTGCTTCACTAAAACCTTCCCTTTGAGCTGTTTAAACCAGCAATGGCTCAATCCATACATCTTCTTCCTAACAACGCTACAGGGTTTGGACTGTCAGATAGCAGATGCCTACCATGCTCTGGAGTTTCGGGACGAACATCCACGGCCTCATCTCGCTCTTTATGCGCTGAACATAAAATCAAAGCCCAGGTCAAATTCCGGCCCCTAAACTCCACTTCGTTAGGGGCTTCTTTTATGTGCAAAGCGAGCTCGGGAGGTCATAGGAGAAACCCAGATTTCTCAAAGCAAAATAGGCATGGCTTCTCACGAAGCAGCAGAAATAGGCAAAAAGAGGAAAAAGATAGCCTTGAAAATCTTGATGAATCTGATCTATTATCTTCTAAGAATGGATCATTACTTTCCATCTCTAGCACACCAAAATCACAGGCCACTGCTACCCCAGGCCCTAGGGAGAAGGAAATTGTTGAACTTTTCAGGAAGGTTCAAGCTCAGCTTCGCGAGCGAGCTGCAATGAAAGAAGAAAAGAAAACAGAGATACAAGGACAAACGGAAGGGAACAAAACGGTGGATTCGCTTCTGACGATACTGAGAAAGCAAGGGAAGAGAAGCAGTGGTAGTGGTAGTGGTGGCAGCACCAGCAGCAAGGACTTCAGTTTTAACCATGTCAAAGAGAATAGTCTATATGATGAGGGGAAAGGCGCAAGCATTTTTGGCCTAAGTGCCAGCTTGAGAGAAAAGGCTCAAGAACCAACAGGATCTTCTTCCAGTAGACCTGTATCACATTTTCAACGTAAATCCCCCGTCCCTCGGGTGAAATACCAACCGATTTACCCTGGGGAAAGTATTGTCGACTCCACCAATGGTGTGATATCAAAGGGAGTGAAATTTAATGGAATAGACACAAGTTCTCAACTGAAGGCAAAGGTATGGACTCGACAAGAGTCGGAACGAGAAGCCTGGGAAGAGCTGCAATCACAAGGAGAGATAGAGCAGGAGTCAGAGCCAGAGCAAGAGTTTGAGTTGGAGCCAGAAACTGAATCATATGTGCTAGAGCATGAACCTGACGAGATGGAGCCTGAACTCGCCAATGTATTAGGTGTGCCATCAGAAGTTGATGAAACATTTGATGAAGATGTTAAAGACAATAAGAAATTCGCAAAGCATGAGGATCACGAGGACTTGATCTCATTGAAGCTTGCTGAACTGAGGGCAATGGCCAAAGCTCGCGGCATGAAAGGCTTCTCGAAGATGAAGAAGAGCGAGCTCCTGCAGTTGCTAAGTGAAGACCAAGTATGAGAAAAGACAATGTTGGATAGGAACTTCATGGTTGTAGGATGTTTGGGTGCAATTTTGTTTTTTCTTGAATATAATCAATCTGTATTGACCAATTTTGAGTTGGAAATTAGCTTTTCAAATCTTTTCCCAGATTGTATATCAGGCTAGGTTCAGGGTGCATGTCATCAATAACAATCTCTTCTTTTACCTTTCTCATATTCAGGTGTTTGTTCACTTTTAGAAATGAATCATTTTTTAACAGCAC ATGGCTCAATCCATACATCTTCTTCCTAACAACGCTACAGGGTTTGGACTGTCAGATAGCAGATGCCTACCATGCTCTGGAGTTTCGGGACGAACATCCACGGCCTCATCTCGCTCTTTATGCGCTGAACATAAAATCAAAGCCCAGGTCAAATTCCGGCCCCTAAACTCCACTTCGTTAGGGGCTTCTTTTATGTGCAAAGCGAGCTCGGGAGGTCATAGGAGAAACCCAGATTTCTCAAAGCAAAATAGGCATGGCTTCTCACGAAGCAGCAGAAATAGGCAAAAAGAGGAAAAAGATAGCCTTGAAAATCTTGATGAATCTGATCTATTATCTTCTAAGAATGGATCATTACTTTCCATCTCTAGCACACCAAAATCACAGGCCACTGCTACCCCAGGCCCTAGGGAGAAGGAAATTGTTGAACTTTTCAGGAAGGTTCAAGCTCAGCTTCGCGAGCGAGCTGCAATGAAAGAAGAAAAGAAAACAGAGATACAAGGACAAACGGAAGGGAACAAAACGGTGGATTCGCTTCTGACGATACTGAGAAAGCAAGGGAAGAGAAGCAGTGGTAGTGGTAGTGGTGGCAGCACCAGCAGCAAGGACTTCAGTTTTAACCATGTCAAAGAGAATAGTCTATATGATGAGGGGAAAGGCGCAAGCATTTTTGGCCTAAGTGCCAGCTTGAGAGAAAAGGCTCAAGAACCAACAGGATCTTCTTCCAGTAGACCTGTATCACATTTTCAACGTAAATCCCCCGTCCCTCGGGTGAAATACCAACCGATTTACCCTGGGGAAAGTATTGTCGACTCCACCAATGGTGTGATATCAAAGGGAGTGAAATTTAATGGAATAGACACAAGTTCTCAACTGAAGGCAAAGGTATGGACTCGACAAGAGTCGGAACGAGAAGCCTGGGAAGAGCTGCAATCACAAGGAGAGATAGAGCAGGAGTCAGAGCCAGAGCAAGAGTTTGAGTTGGAGCCAGAAACTGAATCATATGTGCTAGAGCATGAACCTGACGAGATGGAGCCTGAACTCGCCAATGTATTAGGTGTGCCATCAGAAGTTGATGAAACATTTGATGAAGATGTTAAAGACAATAAGAAATTCGCAAAGCATGAGGATCACGAGGACTTGATCTCATTGAAGCTTGCTGAACTGAGGGCAATGGCCAAAGCTCGCGGCATGAAAGGCTTCTCGAAGATGAAGAAGAGCGAGCTCCTGCAGTTGCTAAGTGAAGACCAAGTATGA MAQSIHLLPNNATGFGLSDSRCLPCSGVSGRTSTASSRSLCAEHKIKAQVKFRPLNSTSLGASFMCKASSGGHRRNPDFSKQNRHGFSRSSRNRQKEEKDSLENLDESDLLSSKNGSLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKTEIQGQTEGNKTVDSLLTILRKQGKRSSGSGSGGSTSSKDFSFNHVKENSLYDEGKGASIFGLSASLREKAQEPTGSSSSRPVSHFQRKSPVPRVKYQPIYPGESIVDSTNGVISKGVKFNGIDTSSQLKAKVWTRQESEREAWEELQSQGEIEQESEPEQEFELEPETESYVLEHEPDEMEPELANVLGVPSEVDETFDEDVKDNKKFAKHEDHEDLISLKLAELRAMAKARGMKGFSKMKKSELLQLLSEDQV Homology
BLAST of Sed0014438 vs. NCBI nr
Match: XP_038887988.1 (rho-N domain-containing protein 1, chloroplastic-like isoform X1 [Benincasa hispida]) HSP 1 Score: 616.3 bits (1588), Expect = 1.9e-172 Identity = 339/422 (80.33%), Postives = 378/422 (89.57%), Query Frame = 0
BLAST of Sed0014438 vs. NCBI nr
Match: XP_038887989.1 (rho-N domain-containing protein 1, chloroplastic-like isoform X2 [Benincasa hispida]) HSP 1 Score: 602.8 bits (1553), Expect = 2.2e-168 Identity = 335/422 (79.38%), Postives = 375/422 (88.86%), Query Frame = 0
BLAST of Sed0014438 vs. NCBI nr
Match: XP_004151986.1 (rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 578.9 bits (1491), Expect = 3.4e-161 Identity = 322/422 (76.30%), Postives = 362/422 (85.78%), Query Frame = 0
BLAST of Sed0014438 vs. NCBI nr
Match: XP_008447421.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X7 [Cucumis melo]) HSP 1 Score: 572.8 bits (1475), Expect = 2.4e-159 Identity = 317/417 (76.02%), Postives = 361/417 (86.57%), Query Frame = 0
BLAST of Sed0014438 vs. NCBI nr
Match: XP_023553735.1 (rho-N domain-containing protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 566.2 bits (1458), Expect = 2.3e-157 Identity = 318/421 (75.53%), Postives = 355/421 (84.32%), Query Frame = 0
BLAST of Sed0014438 vs. ExPASy Swiss-Prot
Match: Q94K75 (Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RHON1 PE=1 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 6.5e-54 Identity = 178/427 (41.69%), Postives = 244/427 (57.14%), Query Frame = 0
BLAST of Sed0014438 vs. ExPASy Swiss-Prot
Match: Q8L4E7 (SAP-like protein BP-73 OS=Oryza sativa subsp. japonica OX=39947 GN=BP-73 PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.6e-31 Identity = 126/360 (35.00%), Postives = 203/360 (56.39%), Query Frame = 0
BLAST of Sed0014438 vs. ExPASy TrEMBL
Match: A0A0A0L7X8 (Rho_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G384780 PE=4 SV=1) HSP 1 Score: 578.9 bits (1491), Expect = 1.7e-161 Identity = 322/422 (76.30%), Postives = 362/422 (85.78%), Query Frame = 0
BLAST of Sed0014438 vs. ExPASy TrEMBL
Match: A0A1S3BHF2 (rho-N domain-containing protein 1, chloroplastic isoform X7 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1) HSP 1 Score: 572.8 bits (1475), Expect = 1.2e-159 Identity = 317/417 (76.02%), Postives = 361/417 (86.57%), Query Frame = 0
BLAST of Sed0014438 vs. ExPASy TrEMBL
Match: A0A1S4DXI1 (rho-N domain-containing protein 1, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1) HSP 1 Score: 563.1 bits (1450), Expect = 9.4e-157 Identity = 317/431 (73.55%), Postives = 361/431 (83.76%), Query Frame = 0
BLAST of Sed0014438 vs. ExPASy TrEMBL
Match: A0A1S4DWS1 (rho-N domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1) HSP 1 Score: 560.8 bits (1444), Expect = 4.7e-156 Identity = 317/437 (72.54%), Postives = 361/437 (82.61%), Query Frame = 0
BLAST of Sed0014438 vs. ExPASy TrEMBL
Match: A0A1S3BIA8 (rho-N domain-containing protein 1, chloroplastic isoform X6 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1) HSP 1 Score: 558.9 bits (1439), Expect = 1.8e-155 Identity = 314/426 (73.71%), Postives = 359/426 (84.27%), Query Frame = 0
BLAST of Sed0014438 vs. TAIR 10
Match: AT1G06190.1 (Rho termination factor ) HSP 1 Score: 213.0 bits (541), Expect = 4.6e-55 Identity = 178/427 (41.69%), Postives = 244/427 (57.14%), Query Frame = 0
BLAST of Sed0014438 vs. TAIR 10
Match: AT1G06190.2 (Rho termination factor ) HSP 1 Score: 166.8 bits (421), Expect = 3.8e-41 Identity = 122/276 (44.20%), Postives = 161/276 (58.33%), Query Frame = 0
BLAST of Sed0014438 vs. TAIR 10
Match: AT2G31150.1 (ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism ) HSP 1 Score: 98.2 bits (243), Expect = 1.6e-20 Identity = 117/311 (37.62%), Postives = 154/311 (49.52%), Query Frame = 0
BLAST of Sed0014438 vs. TAIR 10
Match: AT4G18740.1 (Rho termination factor ) HSP 1 Score: 44.7 bits (104), Expect = 2.2e-04 Identity = 24/44 (54.55%), Postives = 35/44 (79.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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