Sed0014293 (gene) Chayote v1

Overview


Name	Sed0014293
Type	gene
Organism	Sechium edule (Chayote v1)
Description	thymocyte nuclear protein 1
Location	LG07: 8557472 .. 8558175 (-)
RNA-Seq Expression	Sed0014293
Synteny	Sed0014293

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTCCCGCCGGAAAGCCACCCACGTCACTTATCTCTTCTCCCTCACCTGACAAACCACCACAGGTCATCGAAGAAGTCAATGGCCAACGCCGCCGCCGGAGACAAAAAACAGTACTGGCTTCTGAAGACGGAGCCATCGGAGTGGTCGTGGGCGGACCAATCGGCGAACGGCGGGCGAACGAAGTGGGACGGCGTGAAGAACAAGCAAGCGCAGAAAAACATCAAGTCCATGAAACTCGGCGACCTCTGTTTCCTCTACCACTCCGGCGCCAAGGCCCGCCGCGTGGTCGGCGTCGTCGCCGTCGCACGGGAGTGGTACGCGGAGGCGGACGGCGGGGACGCAGTCGTGGACGTGGAGGCGGTGGGGGAAATGAGAGGAGCGGTGGATTTGAGAGAGATGAAGAAGGAGATGGGAGGAATGAAGAACTTCGCGCTGTTCCGGCAACCGCGGCTGTCGGTTGTGCCGGTGGGGAAGGAGATTTGGGAGAAGATCTGTGAACTGGGCGGTGGATTTGAAGGGGATGGAACAGAGTAATTTTGAATGCACGCAAGGTGTTTGTGAATATGCCTGAGAGAGTTTTGTTTGAAAATGGAGATGAATTTCTGGTAGGGTTCGAAGAATTTTGAGGCTCAGGTATGTTTTTGTTTGTTGTATAAAGTTGTAATTTATAGATCTTCTTTTTGGTTCTTCATCAATGCCAG

mRNA sequence

ATTCTCCCGCCGGAAAGCCACCCACGTCACTTATCTCTTCTCCCTCACCTGACAAACCACCACAGGTCATCGAAGAAGTCAATGGCCAACGCCGCCGCCGGAGACAAAAAACAGTACTGGCTTCTGAAGACGGAGCCATCGGAGTGGTCGTGGGCGGACCAATCGGCGAACGGCGGGCGAACGAAGTGGGACGGCGTGAAGAACAAGCAAGCGCAGAAAAACATCAAGTCCATGAAACTCGGCGACCTCTGTTTCCTCTACCACTCCGGCGCCAAGGCCCGCCGCGTGGTCGGCGTCGTCGCCGTCGCACGGGAGTGGTACGCGGAGGCGGACGGCGGGGACGCAGTCGTGGACGTGGAGGCGGTGGGGGAAATGAGAGGAGCGGTGGATTTGAGAGAGATGAAGAAGGAGATGGGAGGAATGAAGAACTTCGCGCTGTTCCGGCAACCGCGGCTGTCGGTTGTGCCGGTGGGGAAGGAGATTTGGGAGAAGATCTGTGAACTGGGCGGTGGATTTGAAGGGGATGGAACAGAGTAATTTTGAATGCACGCAAGGTGTTTGTGAATATGCCTGAGAGAGTTTTGTTTGAAAATGGAGATGAATTTCTGGTAGGGTTCGAAGAATTTTGAGGCTCAGGTATGTTTTTGTTTGTTGTATAAAGTTGTAATTTATAGATCTTCTTTTTGGTTCTTCATCAATGCCAG

Coding sequence (CDS)

ATGGCCAACGCCGCCGCCGGAGACAAAAAACAGTACTGGCTTCTGAAGACGGAGCCATCGGAGTGGTCGTGGGCGGACCAATCGGCGAACGGCGGGCGAACGAAGTGGGACGGCGTGAAGAACAAGCAAGCGCAGAAAAACATCAAGTCCATGAAACTCGGCGACCTCTGTTTCCTCTACCACTCCGGCGCCAAGGCCCGCCGCGTGGTCGGCGTCGTCGCCGTCGCACGGGAGTGGTACGCGGAGGCGGACGGCGGGGACGCAGTCGTGGACGTGGAGGCGGTGGGGGAAATGAGAGGAGCGGTGGATTTGAGAGAGATGAAGAAGGAGATGGGAGGAATGAAGAACTTCGCGCTGTTCCGGCAACCGCGGCTGTCGGTTGTGCCGGTGGGGAAGGAGATTTGGGAGAAGATCTGTGAACTGGGCGGTGGATTTGAAGGGGATGGAACAGAGTAA

Protein sequence

MANAAAGDKKQYWLLKTEPSEWSWADQSANGGRTKWDGVKNKQAQKNIKSMKLGDLCFLYHSGAKARRVVGVVAVAREWYAEADGGDAVVDVEAVGEMRGAVDLREMKKEMGGMKNFALFRQPRLSVVPVGKEIWEKICELGGGFEGDGTE

Homology

[Close]

BLAST of Sed0014293 vs. NCBI nr
Match: KAG6600275.1 (Thymocyte nuclear protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 278.5 bits (711), Expect = 3.5e-71
Identity = 132/151 (87.42%), Postives = 144/151 (95.36%), Query Frame = 0


Query: 1   MANAAAGDKKQYWLLKTEPSEWSWADQSANGGRTKWDGVKNKQAQKNIKSMKLGDLCFLY 60
           MA+AAAGDKKQ+WLLKTEP+EWSWADQ+ANGGRTKWDGVKNKQAQK +KSMKLGDLCF Y
Sbjct: 1   MADAAAGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKYLKSMKLGDLCFFY 60

Query: 61  HSGAKARRVVGVVAVAREWYAEADGGDAVVDVEAVGEMRGAVDLREMKKEMGGMKNFALF 120
           HSGAKARR+VGVV+VAREWY+E DGGDAVVDVEAVGEMR AVDL+EMKK + GMK+FALF
Sbjct: 61  HSGAKARRIVGVVSVAREWYSEGDGGDAVVDVEAVGEMREAVDLKEMKKGIEGMKDFALF 120

Query: 121 RQPRLSVVPVGKEIWEKICELGGGFEGDGTE 152
           RQPRLSVVPV KEIWEKICELGGGFEGDGT+
Sbjct: 121 RQPRLSVVPVAKEIWEKICELGGGFEGDGTD 151

[Close]

BLAST of Sed0014293 vs. NCBI nr
Match: KAG7030934.1 (Thymocyte nuclear protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.1 bits (710), Expect = 4.5e-71
Identity = 131/151 (86.75%), Postives = 144/151 (95.36%), Query Frame = 0


Query: 1   MANAAAGDKKQYWLLKTEPSEWSWADQSANGGRTKWDGVKNKQAQKNIKSMKLGDLCFLY 60
           MA+AAAGDKKQ+WLLKTEP+EWSWADQ+ANGGRTKWDGVKNKQAQK +KSMKLGDLCF Y
Sbjct: 146 MADAAAGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKYLKSMKLGDLCFFY 205

Query: 61  HSGAKARRVVGVVAVAREWYAEADGGDAVVDVEAVGEMRGAVDLREMKKEMGGMKNFALF 120
           HSGAKARR+VGV++VAREWY+E DGGDAVVDVEAVGEMR AVDL+EMKK + GMK+FALF
Sbjct: 206 HSGAKARRIVGVISVAREWYSEGDGGDAVVDVEAVGEMREAVDLKEMKKGIEGMKDFALF 265

Query: 121 RQPRLSVVPVGKEIWEKICELGGGFEGDGTE 152
           RQPRLSVVPV KEIWEKICELGGGFEGDGT+
Sbjct: 266 RQPRLSVVPVAKEIWEKICELGGGFEGDGTD 296

[Close]

BLAST of Sed0014293 vs. NCBI nr
Match: XP_022941981.1 (thymocyte nuclear protein 1 [Cucurbita moschata])

HSP 1 Score: 277.7 bits (709), Expect = 5.9e-71
Identity = 132/151 (87.42%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MANAAAGDKKQYWLLKTEPSEWSWADQSANGGRTKWDGVKNKQAQKNIKSMKLGDLCFLY 60
           MA+AAAGDKKQ+WLLKTEP+EWSWADQ+ANGGRTKWDGVKNKQAQK +KSMKLGDLCF Y
Sbjct: 1   MADAAAGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKYLKSMKLGDLCFFY 60

Query: 61  HSGAKARRVVGVVAVAREWYAEADGGDAVVDVEAVGEMRGAVDLREMKKEMGGMKNFALF 120
           HSGAKARR+VGVV+VAREWY E DGGDAVVDVEAVGEMR AVDL+EMKK + GMK+FALF
Sbjct: 61  HSGAKARRIVGVVSVAREWYLEGDGGDAVVDVEAVGEMREAVDLKEMKKGIEGMKDFALF 120

Query: 121 RQPRLSVVPVGKEIWEKICELGGGFEGDGTE 152
           RQPRLSVVPV KEIWEKICELGGGFEGDGT+
Sbjct: 121 RQPRLSVVPVAKEIWEKICELGGGFEGDGTD 151

[Close]

BLAST of Sed0014293 vs. NCBI nr
Match: XP_023530564.1 (thymocyte nuclear protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.8 bits (704), Expect = 2.2e-70
Identity = 130/151 (86.09%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MANAAAGDKKQYWLLKTEPSEWSWADQSANGGRTKWDGVKNKQAQKNIKSMKLGDLCFLY 60
           MA AA GDKKQ+WLLKTEP+EWSWADQ+ANGGRTKWDGVKNKQAQK++KSMKLGDLCF Y
Sbjct: 1   MAGAAVGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDLCFFY 60

Query: 61  HSGAKARRVVGVVAVAREWYAEADGGDAVVDVEAVGEMRGAVDLREMKKEMGGMKNFALF 120
           HSGAKARR+VGVV+VAREWY+E DGGDAVVDVEAVGEMR  VDL+EMKK + GMK+FALF
Sbjct: 61  HSGAKARRIVGVVSVAREWYSEGDGGDAVVDVEAVGEMREPVDLKEMKKGIEGMKDFALF 120

Query: 121 RQPRLSVVPVGKEIWEKICELGGGFEGDGTE 152
           RQPRLSVVPV KEIWEKICELGGGFEGDGT+
Sbjct: 121 RQPRLSVVPVAKEIWEKICELGGGFEGDGTD 151

[Close]

BLAST of Sed0014293 vs. NCBI nr
Match: XP_022993182.1 (thymocyte nuclear protein 1 [Cucurbita maxima] >XP_022993192.1 thymocyte nuclear protein 1 [Cucurbita maxima])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 127/151 (84.11%), Postives = 140/151 (92.72%), Query Frame = 0


Query: 1   MANAAAGDKKQYWLLKTEPSEWSWADQSANGGRTKWDGVKNKQAQKNIKSMKLGDLCFLY 60
           MA+AA GDKKQ+WLLKTEP+EWSWADQ+ANGGRTKWDGVKNKQAQK++KSMKLGD CF Y
Sbjct: 1   MADAAVGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFY 60

Query: 61  HSGAKARRVVGVVAVAREWYAEADGGDAVVDVEAVGEMRGAVDLREMKKEMGGMKNFALF 120
           HSGAKARR+VGVV+VAREWY+E DGGD VVDVE VGEMR  VDL+EMKK + GMK+FALF
Sbjct: 61  HSGAKARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALF 120

Query: 121 RQPRLSVVPVGKEIWEKICELGGGFEGDGTE 152
           RQPRLSVVPV KEIWEKICELGGGFEGDGT+
Sbjct: 121 RQPRLSVVPVAKEIWEKICELGGGFEGDGTD 151

[Close]

BLAST of Sed0014293 vs. ExPASy Swiss-Prot
Match: Q91YJ3 (Thymocyte nuclear protein 1 OS=Mus musculus OX=10090 GN=Thyn1 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 54/164 (32.93%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 12  YWLLKTEPS---------EWSWADQSANGGRTK-WDGVKNKQAQKNIKSMKLGDLCFLYH 71
           YWL+K+EP          ++S  D  A   +T  WDGV+N QA+  +++MKL D  F YH
Sbjct: 57  YWLMKSEPESRLEKGIDMKFSIEDLKAQPKQTACWDGVRNYQARNFLRAMKLEDEAFFYH 116

Query: 72  SGAKARRVVGVVAVAREWY-----------------AEADGGDAVVDVEAVGEMRGAVDL 131
           S  K   +VG++ + +E Y                  E D   ++VDV+ V  M+  + L
Sbjct: 117 SNCKQPGIVGLMKIVKEAYPDHTQFEKSNPHYDPSSKEDDPKWSMVDVQFVRMMKRFIPL 176

Query: 132 REMK------KEMGG-MKNFALFRQPRLSVVPVGKEIWEKICEL 142
            E+K      K  GG +K+  LF + RLSV P+ +E ++ I  L
Sbjct: 177 EELKTYHQAHKATGGPLKSMTLFTRQRLSVQPLTQEEFDFILSL 220

[Close]

BLAST of Sed0014293 vs. ExPASy Swiss-Prot
Match: Q90679 (Thymocyte nuclear protein 1 OS=Gallus gallus OX=9031 GN=THYN1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.4e-11
Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = 0


Query: 12  YWLLKTEPS---------EWSWADQSANGGRTK-WDGVKNKQAQKNIKSMKLGDLCFLYH 71
           +WLLK+EP          ++S  D  A   +T  W+GV+N QA+  +++MKLG   F YH
Sbjct: 73  HWLLKSEPESRLEKGVDVKFSIEDLKAQPNQTTFWEGVRNYQARNFLRAMKLGQQAFFYH 132

Query: 72  SGAKARRVVGVVAVAREWYAEADGGD-----------------AVVDVEAVGEMRGAVDL 131
           S  K   +VG+V + +E Y +    D                 ++VDV+ V   +  + L
Sbjct: 133 SNCKEPGIVGIVKIVKEAYPDHTQFDQKDPHYDSSSRKENPKWSMVDVQFVRMTKRFIPL 192

Query: 132 REM-------KKEMGGMKNFALFRQPRLSVVPVGKEIWEKICEL 142
            E+       K + G +KN  LF + RLS+ P+ +E ++ +  L
Sbjct: 193 SEIKTHHLAHKADGGPLKNMMLFSRQRLSIQPLTQEEFDFVLSL 236

[Close]

BLAST of Sed0014293 vs. ExPASy Swiss-Prot
Match: Q9P016 (Thymocyte nuclear protein 1 OS=Homo sapiens OX=9606 GN=THYN1 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.3e-11
Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 12  YWLLKTEPS---------EWSWADQSANGGRTK-WDGVKNKQAQKNIKSMKLGDLCFLYH 71
           +WL+K+EP          ++S  D  A   +T  WDGV+N QA+  +++MKLG+  F YH
Sbjct: 56  HWLMKSEPESRLEKGVDVKFSIEDLKAQPKQTTCWDGVRNYQARNFLRAMKLGEEAFFYH 115

Query: 72  SGAKARRVVGVVAVAREWY-----------------AEADGGDAVVDVEAVGEMRGAVDL 131
           S  K   + G++ + +E Y                  E +   ++VDV+ V  M+  + L
Sbjct: 116 SNCKEPGIAGLMKIVKEAYPDHTQFEKNNPHYDPSSKEDNPKWSMVDVQFVRMMKRFIPL 175

Query: 132 REMK------KEMGG-MKNFALFRQPRLSVVPVGKEIWEKICEL 142
            E+K      K  GG +KN  LF + RLS+ P+ +E ++ +  L
Sbjct: 176 AELKSYHQAHKATGGPLKNMVLFTRQRLSIQPLTQEEFDFVLSL 219

[Close]

BLAST of Sed0014293 vs. ExPASy Swiss-Prot
Match: Q6P3E0 (Thymocyte nuclear protein 1 OS=Rattus norvegicus OX=10116 GN=Thyn1 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 53/164 (32.32%), Postives = 81/164 (49.39%), Query Frame = 0


Query: 12  YWLLKTEPS---------EWSWADQSANGGRTK-WDGVKNKQAQKNIKSMKLGDLCFLYH 71
           YWL+K+EP          ++S  D  A   +T  WDGV+N QA   +++MKL D  F YH
Sbjct: 57  YWLMKSEPESRLEKGIDMKFSIEDLQAQPKQTTCWDGVRNYQAWNFLRAMKLEDEAFFYH 116

Query: 72  SGAKARRVVGVVAVAREWY-----------------AEADGGDAVVDVEAVGEMRGAVDL 131
           S  K   +VG++ + +E Y                  E +   ++VDV+ V  M+  + L
Sbjct: 117 SNCKQPGIVGLMKIVKEAYPDHTQFEKNDPHYDPSSKEDNPKWSMVDVQFVRMMKRFISL 176

Query: 132 REMK------KEMGG-MKNFALFRQPRLSVVPVGKEIWEKICEL 142
            E+K      K  GG +K+  LF + RLSV P+ +E ++ I  L
Sbjct: 177 DELKTYHQAHKATGGPLKSMTLFTRQRLSVQPLTQEEFDFILSL 220

[Close]

BLAST of Sed0014293 vs. ExPASy Swiss-Prot
Match: Q6PFL8 (Thymocyte nuclear protein 1 OS=Danio rerio OX=7955 GN=thyn1 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08
Identity = 47/163 (28.83%), Postives = 76/163 (46.63%), Query Frame = 0


Query: 13  WLLKTEPS---------EWSWADQSANGGRTK-WDGVKNKQAQKNIKSMKLGDLCFLYHS 72
           WL+K+EP          ++   D  A   +T  WDGV+N QA+  ++ MK+G   F YHS
Sbjct: 63  WLMKSEPESRIENGVDVKFGIEDLKALPNQTGCWDGVRNYQARNFMREMKVGQQAFFYHS 122

Query: 73  GAKARRVVGVVAVAREWYAEADGGDA-----------------VVDVEAVGEMRGAVDLR 132
             K   + G++ + +E Y +    D                  +VDV+    ++  + L 
Sbjct: 123 NCKEPGIAGLMKIVKEAYVDHTQFDKKDVHYDPSSKADNPKWHMVDVQFERMVKRFIPLA 182

Query: 133 EMKK-------EMGGMKNFALFRQPRLSVVPVGKEIWEKICEL 142
           E+KK       + G +K+ ALF + RLSV P+  E +E +  L
Sbjct: 183 ELKKYHLEHRVKGGPLKDMALFTRARLSVQPLTAEEFEFVLSL 225

[Close]

BLAST of Sed0014293 vs. ExPASy TrEMBL
Match: A0A6J1FML1 (thymocyte nuclear protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447187 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.9e-71
Identity = 132/151 (87.42%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MANAAAGDKKQYWLLKTEPSEWSWADQSANGGRTKWDGVKNKQAQKNIKSMKLGDLCFLY 60
           MA+AAAGDKKQ+WLLKTEP+EWSWADQ+ANGGRTKWDGVKNKQAQK +KSMKLGDLCF Y
Sbjct: 1   MADAAAGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKYLKSMKLGDLCFFY 60

Query: 61  HSGAKARRVVGVVAVAREWYAEADGGDAVVDVEAVGEMRGAVDLREMKKEMGGMKNFALF 120
           HSGAKARR+VGVV+VAREWY E DGGDAVVDVEAVGEMR AVDL+EMKK + GMK+FALF
Sbjct: 61  HSGAKARRIVGVVSVAREWYLEGDGGDAVVDVEAVGEMREAVDLKEMKKGIEGMKDFALF 120

Query: 121 RQPRLSVVPVGKEIWEKICELGGGFEGDGTE 152
           RQPRLSVVPV KEIWEKICELGGGFEGDGT+
Sbjct: 121 RQPRLSVVPVAKEIWEKICELGGGFEGDGTD 151

[Close]

BLAST of Sed0014293 vs. ExPASy TrEMBL
Match: A0A6J1JS35 (thymocyte nuclear protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111489276 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.9e-69
Identity = 127/151 (84.11%), Postives = 140/151 (92.72%), Query Frame = 0


Query: 1   MANAAAGDKKQYWLLKTEPSEWSWADQSANGGRTKWDGVKNKQAQKNIKSMKLGDLCFLY 60
           MA+AA GDKKQ+WLLKTEP+EWSWADQ+ANGGRTKWDGVKNKQAQK++KSMKLGD CF Y
Sbjct: 1   MADAAVGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFY 60

Query: 61  HSGAKARRVVGVVAVAREWYAEADGGDAVVDVEAVGEMRGAVDLREMKKEMGGMKNFALF 120
           HSGAKARR+VGVV+VAREWY+E DGGD VVDVE VGEMR  VDL+EMKK + GMK+FALF
Sbjct: 61  HSGAKARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALF 120

Query: 121 RQPRLSVVPVGKEIWEKICELGGGFEGDGTE 152
           RQPRLSVVPV KEIWEKICELGGGFEGDGT+
Sbjct: 121 RQPRLSVVPVAKEIWEKICELGGGFEGDGTD 151

[Close]

BLAST of Sed0014293 vs. ExPASy TrEMBL
Match: A0A0A0KWC0 (EVE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000630 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.6e-66
Identity = 127/151 (84.11%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 1   MANAAAGDKKQYWLLKTEPSEWSWADQSANGGRTKWDGVKNKQAQKNIKSMKLGDLCFLY 60
           MANA AGDK+QYWLLKTEP+EWSWADQ+AN GRT WDGVKNKQAQK++KSMKLGD CF Y
Sbjct: 47  MANAVAGDKRQYWLLKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFY 106

Query: 61  HSGAKARRVVGVVAVAREWYAEADGGDAVVDVEAVGEMRGAVDLREMKKEMGGMKNFALF 120
           HSGAKARRVVGVVAVAREWY+  D  + VVDVEAVGEMR  VDL+EMKK M GMKNFALF
Sbjct: 107 HSGAKARRVVGVVAVAREWYSSVD-DEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALF 166

Query: 121 RQPRLSVVPVGKEIWEKICELGGGFEGDGTE 152
           RQPRLSVVPV KEIW+KICELGGGFEGDGTE
Sbjct: 167 RQPRLSVVPVTKEIWDKICELGGGFEGDGTE 196

[Close]

BLAST of Sed0014293 vs. ExPASy TrEMBL
Match: A0A5D3E131 (Thymocyte nuclear protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00410 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.0e-65
Identity = 125/151 (82.78%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 1   MANAAAGDKKQYWLLKTEPSEWSWADQSANGGRTKWDGVKNKQAQKNIKSMKLGDLCFLY 60
           MAN  AGDK+QYWLLKTEP+EWSWADQ+AN GR+KWDGVKNKQAQK++KSMKLGD CF Y
Sbjct: 1   MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY 60

Query: 61  HSGAKARRVVGVVAVAREWYAEADGGDAVVDVEAVGEMRGAVDLREMKKEMGGMKNFALF 120
           HSGAKARRVVGVVAVAREWY+  +  + VVDVEAVGEMR  VDL+EMKK M GMKNFALF
Sbjct: 61  HSGAKARRVVGVVAVAREWYSSVE-DEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALF 120

Query: 121 RQPRLSVVPVGKEIWEKICELGGGFEGDGTE 152
           RQPRLSVVPV KEIW+KICELGGGFEGDGTE
Sbjct: 121 RQPRLSVVPVAKEIWDKICELGGGFEGDGTE 150

[Close]

BLAST of Sed0014293 vs. ExPASy TrEMBL
Match: E5GBH2 (EVE domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.0e-65
Identity = 125/151 (82.78%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 1   MANAAAGDKKQYWLLKTEPSEWSWADQSANGGRTKWDGVKNKQAQKNIKSMKLGDLCFLY 60
           MAN  AGDK+QYWLLKTEP+EWSWADQ+AN GR+KWDGVKNKQAQK++KSMKLGD CF Y
Sbjct: 46  MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY 105

Query: 61  HSGAKARRVVGVVAVAREWYAEADGGDAVVDVEAVGEMRGAVDLREMKKEMGGMKNFALF 120
           HSGAKARRVVGVVAVAREWY+  +  + VVDVEAVGEMR  VDL+EMKK M GMKNFALF
Sbjct: 106 HSGAKARRVVGVVAVAREWYSSVE-DEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALF 165

Query: 121 RQPRLSVVPVGKEIWEKICELGGGFEGDGTE 152
           RQPRLSVVPV KEIW+KICELGGGFEGDGTE
Sbjct: 166 RQPRLSVVPVAKEIWDKICELGGGFEGDGTE 195

[Close]

BLAST of Sed0014293 vs. TAIR 10
Match: AT2G14660.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0310 (InterPro:IPR002740); Has 2761 Blast hits to 2761 proteins in 686 species: Archae - 5; Bacteria - 1143; Metazoa - 73; Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes - 1420 (source: NCBI BLink). )

HSP 1 Score: 206.5 bits (524), Expect = 1.6e-53
Identity = 101/149 (67.79%), Postives = 118/149 (79.19%), Query Frame = 0


Query: 7   GDKKQYWLLKTEPSEWSWADQSANGGRTKWDGVKNKQAQKNIKSMKLGDLCFLYHSGAKA 66
           G  K+YWLLKTEP+EWSW+DQ +NGG +KWDGVKNKQAQKN+KSM LGDLCF YHSG K+
Sbjct: 2   GKTKRYWLLKTEPNEWSWSDQESNGGISKWDGVKNKQAQKNLKSMTLGDLCFFYHSGTKS 61

Query: 67  RRVVGVVAVAREWY---AEADGGDAVVDVEAVGEMRGAVDLREMKKEMGGM-KNFALFRQ 126
           R VVGVV V+REWY   AE   G+  VDV+A+GEMR  VDL+EMK + G + K F LFRQ
Sbjct: 62  RCVVGVVEVSREWYTDDAEGVEGEGAVDVKAIGEMRKCVDLKEMKGDKGIITKGFVLFRQ 121

Query: 127 PRLSVVPVGKEIWEKICELGGGFEGDGTE 152
           PRLSVVPV +++W  ICELG GF GDG E
Sbjct: 122 PRLSVVPVEEDVWNMICELGNGFCGDGKE 150

The following BLAST results are available for this feature:

BLAST of Sed0014293 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600275.1	3.5e-71	87.42	Thymocyte nuclear protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7030934.1	4.5e-71	86.75	Thymocyte nuclear protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022941981.1	5.9e-71	87.42	thymocyte nuclear protein 1 [Cucurbita moschata]	[more]
XP_023530564.1	2.2e-70	86.09	thymocyte nuclear protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022993182.1	1.2e-68	84.11	thymocyte nuclear protein 1 [Cucurbita maxima] >XP_022993192.1 thymocyte nuclear...	[more]

BLAST of Sed0014293 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91YJ3	1.1e-11	32.93	Thymocyte nuclear protein 1 OS=Mus musculus OX=10090 GN=Thyn1 PE=1 SV=1	[more]
Q90679	5.4e-11	29.88	Thymocyte nuclear protein 1 OS=Gallus gallus OX=9031 GN=THYN1 PE=1 SV=1	[more]
Q9P016	9.3e-11	30.49	Thymocyte nuclear protein 1 OS=Homo sapiens OX=9606 GN=THYN1 PE=1 SV=1	[more]
Q6P3E0	1.2e-10	32.32	Thymocyte nuclear protein 1 OS=Rattus norvegicus OX=10116 GN=Thyn1 PE=2 SV=1	[more]
Q6PFL8	1.1e-08	28.83	Thymocyte nuclear protein 1 OS=Danio rerio OX=7955 GN=thyn1 PE=2 SV=1	[more]

BLAST of Sed0014293 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FML1	2.9e-71	87.42	thymocyte nuclear protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447187 PE=4 S...	[more]
A0A6J1JS35	5.9e-69	84.11	thymocyte nuclear protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111489276 PE=4 SV=...	[more]
A0A0A0KWC0	1.6e-66	84.11	EVE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000630 PE=4 SV...	[more]
A0A5D3E131	1.0e-65	82.78	Thymocyte nuclear protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
E5GBH2	1.0e-65	82.78	EVE domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of Sed0014293 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14660.1	1.6e-53	67.79	unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002740	EVE domain	PFAM	PF01878	EVE	coord: 11..141 e-value: 5.1E-37 score: 127.1
None	No IPR available	GENE3D	3.10.590.10	ph1033 like domains	coord: 9..148 e-value: 1.3E-40 score: 140.6
None	No IPR available	PANTHER	PTHR14087	THYMOCYTE NUCLEAR PROTEIN 1	coord: 5..149
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 9..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014293.1	Sed0014293.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007166	cell surface receptor signaling pathway
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity