Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTTAGAGAGGTGAAGAGAAGATTATATGAATCGAAGGAACTTGTCGAGAAGCAAGAAATGAGAGTGCGTTATCACGAGACTAAAGCCCGCAACACAATCGTGGCTTATCTAATCTGGGAGAGGATGTTTGCTTTTGGCGTGAATCAGTATGATCAGTTGAATTGCTCTCATCGGTGGATGTGGTTGGGTTTTAGCCTCTCCGTTACCGCTCTCTACCTTTTGTTCTTCCTCGAGGCGGCTCTCATGATGTGTCGAGCTCAGTACCACTTGAATATCATTTCTAAGAAACTGATGATCATTTTGAATAATGATAATATTGCTTCAAATCCAGATGTTGATCATGATTTTGAGGACTCCATGTGCTTGAGTACAACAACCATCCACGTATAATTGTACTTAAGATGATTTATGTTGCATGCACCCTCTTTGCTTTGCTTGCCGTTGCTGCTTTTCAGCTATATATGTGTAAGTATTCGTTGTGCACCAACTAA
mRNA sequence
ATGGATTTTAGAGAGGTGAAGAGAAGATTATATGAATCGAAGGAACTTGTCGAGAAGCAAGAAATGAGAGTGCGTTATCACGAGACTAAAGCCCGCAACACAATCGTGGCTTATCTAATCTGGGAGAGGATGTTTGCTTTTGGCGTGAATCAGTATGATCAGTTGAATTGCTCTCATCGGTGGATGTGGTTGGGTTTTAGCCTCTCCGTTACCGCTCTCTACCTTTTGTTCTTCCTCGAGGCGGCTCTCATGATGTGTCGAGCTCAGTACCACTTGAATATCATTTCTAAGAAACTGATGATCATTTTGAATAATGATAATATTGCTTCAAATCCAGATTACAACAACCATCCACGTATAATTGTACTTAAGATGATTTATGTTGCATGCACCCTCTTTGCTTTGCTTGCCGTTGCTGCTTTTCAGCTATATATGTGTAAGTATTCGTTGTGCACCAACTAA
Coding sequence (CDS)
ATGGATTTTAGAGAGGTGAAGAGAAGATTATATGAATCGAAGGAACTTGTCGAGAAGCAAGAAATGAGAGTGCGTTATCACGAGACTAAAGCCCGCAACACAATCGTGGCTTATCTAATCTGGGAGAGGATGTTTGCTTTTGGCGTGAATCAGTATGATCAGTTGAATTGCTCTCATCGGTGGATGTGGTTGGGTTTTAGCCTCTCCGTTACCGCTCTCTACCTTTTGTTCTTCCTCGAGGCGGCTCTCATGATGTGTCGAGCTCAGTACCACTTGAATATCATTTCTAAGAAACTGATGATCATTTTGAATAATGATAATATTGCTTCAAATCCAGATTACAACAACCATCCACGTATAATTGTACTTAAGATGATTTATGTTGCATGCACCCTCTTTGCTTTGCTTGCCGTTGCTGCTTTTCAGCTATATATGTGTAAGTATTCGTTGTGCACCAACTAA
Protein sequence
MDFREVKRRLYESKELVEKQEMRVRYHETKARNTIVAYLIWERMFAFGVNQYDQLNCSHRWMWLGFSLSVTALYLLFFLEAALMMCRAQYHLNIISKKLMIILNNDNIASNPDYNNHPRIIVLKMIYVACTLFALLAVAAFQLYMCKYSLCTN
Homology
BLAST of Sed0014190 vs. NCBI nr
Match:
ADN33782.1 (hypothetical protein [Cucumis melo subsp. melo])
HSP 1 Score: 117.9 bits (294), Expect = 7.9e-23
Identity = 78/181 (43.09%), Postives = 104/181 (57.46%), Query Frame = 0
Query: 1 MDFREVKRRLYESKELVEKQEMRVRYHETKARNTIVAYLIWERMFAFGV----NQYDQLN 60
M+ E+KR K L EKQE RVRY+ET+A+N +A LIW+R+F G+ + LN
Sbjct: 3 MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 CS-HRWMWLGFSLSVTALYLLFFLEAALMMCRAQYHLNIISKKLMIIL---------NND 120
C+ H WM LGFSL+ T+LYLLFFLEA M+ RAQ L+IISKK + I N+D
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPNDD 122
Query: 121 NIASNPDYNN--------------HPRIIVLKMIYVACTLFALLAVAAFQLYMCKYSLCT 154
+N HP +V + IY+A T+ LLAV+AF++Y CK LC
Sbjct: 123 EAGDTFSSDNGGLELSFQVQLLQYHPLTVVQRKIYIASTISTLLAVSAFEVYTCKLLLCN 182
BLAST of Sed0014190 vs. NCBI nr
Match:
KAA0042580.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05984.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 116.7 bits (291), Expect = 1.8e-22
Identity = 78/181 (43.09%), Postives = 103/181 (56.91%), Query Frame = 0
Query: 1 MDFREVKRRLYESKELVEKQEMRVRYHETKARNTIVAYLIWERMFAFGV----NQYDQLN 60
MD +KR K L EKQE RVRY+ET+A+N +A LIW+R+F G+ + LN
Sbjct: 3 MDLGVLKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 CS-HRWMWLGFSLSVTALYLLFFLEAALMMCRAQYHLNIISKKLMIIL---------NND 120
C+ H WM LGFSL+ T+LYLLFFLEA M+ RAQ L+IISK+ + I N+D
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKRQIEISLQILNTGSPNDD 122
Query: 121 NIASNPDYNN--------------HPRIIVLKMIYVACTLFALLAVAAFQLYMCKYSLCT 154
+N HP +V + IY+A T+ LLAVAAF++Y CK LC
Sbjct: 123 EAGDTFSSDNGGLELSFQVQLLQYHPLTVVQRKIYIASTISTLLAVAAFEVYTCKLLLCN 182
BLAST of Sed0014190 vs. NCBI nr
Match:
KAA0042578.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05982.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 113.6 bits (283), Expect = 1.5e-21
Identity = 76/184 (41.30%), Postives = 101/184 (54.89%), Query Frame = 0
Query: 1 MDFREVKRRLYESKELVEKQEMRVRYHETKARNTIVAYLIWERMFAFGV----NQYDQLN 60
M F+E+KR+ K L EKQE RVRY+ET+A+N +A LIW R+F G+ + LN
Sbjct: 3 MRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWYRLFVVGMYHISSSLSLLN 62
Query: 61 CSHR-WMWLGFSLSVTALYLLFFLEAALMMCRAQYHLNIISKKLMIILNNDNIASNPD-- 120
C+H WM LGFSL+ T+LYLLFFLEA M+ RAQ L+II K+ I NPD
Sbjct: 63 CTHHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIIYKQQNEISQQILNTGNPDDY 122
Query: 121 ------------------------YNNHPRIIVLKMIYVACTLFALLAVAAFQLYMCKYS 154
Y+ +V + +Y+A T+ LLAVAAF++Y CK
Sbjct: 123 EGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKVYIASTISTLLAVAAFEVYTCKLL 182
BLAST of Sed0014190 vs. NCBI nr
Match:
XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])
HSP 1 Score: 99.4 bits (246), Expect = 2.9e-17
Identity = 66/177 (37.29%), Postives = 95/177 (53.67%), Query Frame = 0
Query: 1 MDFREVKRRLYESKELVEKQEMRVRYHETKARNTIVAYLIWERMFAFGVNQYDQ--LNCS 60
M+F E+KR K+LVEKQE RV+YHE++A+N +AYLIW R+F F ++Q L C
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 61 HRWMWLGFSLSVTALYLLFFLEAALMMCRAQYHLNIISKKLMIILNNDNIASNP------ 120
WM LG S+S +Y LFFLEA M+ R Q+ ++II K+ I +A +
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 121 -----------DYNNHPRI-------IVLKMIYVACTLFALLAVAAFQLYMCKYSLC 152
++ H ++ IV + Y+ T+ ALLAV A +LY C + C
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYC 177
BLAST of Sed0014190 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 97.4 bits (241), Expect = 1.1e-16
Identity = 63/175 (36.00%), Postives = 96/175 (54.86%), Query Frame = 0
Query: 1 MDFREVKRRLYESKELVEKQEMRVRYHETKARNTIVAYLIWERMFAFGVNQ-YDQLNCSH 60
M E++R+ E K++ EKQE RVRY+ETK +N + YLI+ R+F FG++Q NC
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 61 RWMWLGFSLSVTALYLLFFLEAALMMCRAQYHLNIISKKLMIILNNDNIASNPD------ 120
W+ L SL + +Y L FL+A M+ R QY L+II K+L + ++ N D
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120
Query: 121 ----------YNNHPRIIVL-------KMIYVACTLFALLAVAAFQLYMCKYSLC 152
+ H ++++L + +Y+ T+ ALLAV A +LY+ KY LC
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLC 175
BLAST of Sed0014190 vs. ExPASy TrEMBL
Match:
A0A0A0KM15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 1.7e-23
Identity = 80/181 (44.20%), Postives = 107/181 (59.12%), Query Frame = 0
Query: 1 MDFREVKRRLYESKELVEKQEMRVRYHETKARNTIVAYLIWERMFAFGV----NQYDQLN 60
M+F E+KR+ K L EKQE RVRY+ET+A+N +A LIW+R+F G+ + LN
Sbjct: 3 MEFGELKRKFDGLKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSLLN 62
Query: 61 CSHR-WMWLGFSLSVTALYLLFFLEAALMMCRAQYHLNIISKK----LMIILN------- 120
C+H WM F LS T+LY LFFLEA M+ RAQ L+IISKK + ILN
Sbjct: 63 CTHHLWMVFSFILSSTSLYFLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPNDD 122
Query: 121 --NDNIASNPDYNN----------HPRIIVLKMIYVACTLFALLAVAAFQLYMCKYSLCT 154
D+I+S+ + HP +V + +Y+A T+F LLAVAAF+LY CK LC
Sbjct: 123 EAGDSISSDNGWLELSFQVQLLPYHPFTLVQRKVYIASTIFTLLAVAAFELYTCKLLLCN 182
BLAST of Sed0014190 vs. ExPASy TrEMBL
Match:
E5GBE1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 117.9 bits (294), Expect = 3.8e-23
Identity = 78/181 (43.09%), Postives = 104/181 (57.46%), Query Frame = 0
Query: 1 MDFREVKRRLYESKELVEKQEMRVRYHETKARNTIVAYLIWERMFAFGV----NQYDQLN 60
M+ E+KR K L EKQE RVRY+ET+A+N +A LIW+R+F G+ + LN
Sbjct: 3 MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 CS-HRWMWLGFSLSVTALYLLFFLEAALMMCRAQYHLNIISKKLMIIL---------NND 120
C+ H WM LGFSL+ T+LYLLFFLEA M+ RAQ L+IISKK + I N+D
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPNDD 122
Query: 121 NIASNPDYNN--------------HPRIIVLKMIYVACTLFALLAVAAFQLYMCKYSLCT 154
+N HP +V + IY+A T+ LLAV+AF++Y CK LC
Sbjct: 123 EAGDTFSSDNGGLELSFQVQLLQYHPLTVVQRKIYIASTISTLLAVSAFEVYTCKLLLCN 182
BLAST of Sed0014190 vs. ExPASy TrEMBL
Match:
A0A5A7TGW8 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00800 PE=4 SV=1)
HSP 1 Score: 116.7 bits (291), Expect = 8.5e-23
Identity = 78/181 (43.09%), Postives = 103/181 (56.91%), Query Frame = 0
Query: 1 MDFREVKRRLYESKELVEKQEMRVRYHETKARNTIVAYLIWERMFAFGV----NQYDQLN 60
MD +KR K L EKQE RVRY+ET+A+N +A LIW+R+F G+ + LN
Sbjct: 3 MDLGVLKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 CS-HRWMWLGFSLSVTALYLLFFLEAALMMCRAQYHLNIISKKLMIIL---------NND 120
C+ H WM LGFSL+ T+LYLLFFLEA M+ RAQ L+IISK+ + I N+D
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKRQIEISLQILNTGSPNDD 122
Query: 121 NIASNPDYNN--------------HPRIIVLKMIYVACTLFALLAVAAFQLYMCKYSLCT 154
+N HP +V + IY+A T+ LLAVAAF++Y CK LC
Sbjct: 123 EAGDTFSSDNGGLELSFQVQLLQYHPLTVVQRKIYIASTISTLLAVAAFEVYTCKLLLCN 182
BLAST of Sed0014190 vs. ExPASy TrEMBL
Match:
A0A5D3C430 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00780 PE=4 SV=1)
HSP 1 Score: 113.6 bits (283), Expect = 7.2e-22
Identity = 76/184 (41.30%), Postives = 101/184 (54.89%), Query Frame = 0
Query: 1 MDFREVKRRLYESKELVEKQEMRVRYHETKARNTIVAYLIWERMFAFGV----NQYDQLN 60
M F+E+KR+ K L EKQE RVRY+ET+A+N +A LIW R+F G+ + LN
Sbjct: 3 MRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWYRLFVVGMYHISSSLSLLN 62
Query: 61 CSHR-WMWLGFSLSVTALYLLFFLEAALMMCRAQYHLNIISKKLMIILNNDNIASNPD-- 120
C+H WM LGFSL+ T+LYLLFFLEA M+ RAQ L+II K+ I NPD
Sbjct: 63 CTHHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIIYKQQNEISQQILNTGNPDDY 122
Query: 121 ------------------------YNNHPRIIVLKMIYVACTLFALLAVAAFQLYMCKYS 154
Y+ +V + +Y+A T+ LLAVAAF++Y CK
Sbjct: 123 EGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKVYIASTISTLLAVAAFEVYTCKLL 182
BLAST of Sed0014190 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 1.4e-17
Identity = 66/177 (37.29%), Postives = 95/177 (53.67%), Query Frame = 0
Query: 1 MDFREVKRRLYESKELVEKQEMRVRYHETKARNTIVAYLIWERMFAFGVNQYDQ--LNCS 60
M+F E+KR K+LVEKQE RV+YHE++A+N +AYLIW R+F F ++Q L C
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 61 HRWMWLGFSLSVTALYLLFFLEAALMMCRAQYHLNIISKKLMIILNNDNIASNP------ 120
WM LG S+S +Y LFFLEA M+ R Q+ ++II K+ I +A +
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 121 -----------DYNNHPRI-------IVLKMIYVACTLFALLAVAAFQLYMCKYSLC 152
++ H ++ IV + Y+ T+ ALLAV A +LY C + C
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYC 177
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
ADN33782.1 | 7.9e-23 | 43.09 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
KAA0042580.1 | 1.8e-22 | 43.09 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
KAA0042578.1 | 1.5e-21 | 41.30 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
XP_022157130.1 | 2.9e-17 | 37.29 | uncharacterized protein LOC111023927 [Momordica charantia] | [more] |
XP_022157182.1 | 1.1e-16 | 36.00 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KM15 | 1.7e-23 | 44.20 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1 | [more] |
E5GBE1 | 3.8e-23 | 43.09 | Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
A0A5A7TGW8 | 8.5e-23 | 43.09 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A5D3C430 | 7.2e-22 | 41.30 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A6J1DS87 | 1.4e-17 | 37.29 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
Match Name | E-value | Identity | Description | |