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Sed0014142 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCGAACGGCGTCGTATTAGAGAACTTGGATAAGTGTCCATCCACAGTGTAAGAACCGAGGAGAGAAACCTGAAGCGCTTGAAAAAATGGCGTCCACAAGCGCAACGGTAATCAACATCGCTTCAGAAATCCAACGCCCAATATTCACCAAAGTAAGCACAACTGTATCCATTCCAGCCTCCAAAATTCCATAAATTCCTCACAAGCTGAACCAAAGTAAGTATGGAATTACTATCATTTTCAAATTCCTTTTTTGTTTTGCAGGCTCCTGTTCATGGCTGTCGCCCCAATTCTCTTGTTTGTCTCAGCTTCGATAGCGTACAGCATGGTCTGTGCATGAGGTAGATTAGTTGCTTTCCAATTTCGACGTTGATTCTTGATTTAGGTTATTGAGCAGTGTGATTGATTGATGTATAATTTAAGGTGTTTATTGGTCTCATCGTTGGTTAAAATGGGTTCAATCACTATATATTTTCGATTTGGTGATTTCCAGGTCGTCATTTTCTTTAAGTCTTCATTTCCGGGGTTCCAGATTTGTGTCCACAACCACGCCCATAGCTAGCTCGGGTAATTCTCATTTTATGGTTTATTTTTGGGTGGCTGCTTAATAATTTATTACTCAACTTTGTTTTGCAGTTCAGTCTATGTTGACTAAAATTGTAATCACTGATTGTGAACTGGGATACTAAGTCCTTTTTTACAACCATTTGAGTTTTTGTTTTTGGTTTTCGAATTTTAAGCTTGTTTTCTCTCAAATTTTTACCAAGAGTTTTAAGTATTTGATTTTAACTAGATTCTAAAAACCAAAATAAGCCGTTGGAAGTTATTTTTTTAGTTTTCAAATTTTGGTTGGGTTTTTATTAACATAAGTAGCAACTTAGCTATCAAAGTAAGGAAAGCCTAGAACAACTACGTTATCTATGGCTTAGTTTTAAACAACAAAAAATAAAATAGTTATCAAACATATTCAATGTGTTAAAAGGCTAAAGGCAGCCTCGAGGCGTTTTCGCTTGAAGAGGCAAGGCTGAGGCGTAAGCCTCAATTTTAATAAAAAAAATATTATAAAAAATCTAAATTTGTGTAAACATGTATCGTAAAACATAATACTTATGTAAAAATACATAAAACATAACATCAACAATAATAGGATTGAGTGTTTTTTAAAATAAGAAACAATTTCATTACGAATGAATTATAAGTGAATTCTCCAAGCACCTATAATGAATACAACAAAGAACTCCAAAAGGACATGCTAGAGGAAAAGAAGCCATCAAATGATTAAAATTAAAATGACGATTTTGAAATAATTGTGTTTTTCTGACAAAAGAATCCATAAGATAAAATCTATATTGCCATGGTTTAAACCCTTATATTATAAGAATGTAAAATATTAATACTATTCTTCTACTTATTCTACGAGGCATAGGAATTTTAACTTCAATGCATTATCATTGAGGCGTAAGTCTCTTATAGTCCAAGAAAGGCATAAGATTCAAGGCTAAAAGTTAGAGCCTCGCCTTGAGGCTGTAAGCCTCAATAGCCTTTTAAAACATGGAACATATTTCGATTGACTTCATCTTGACGAAACTTTTCACAATATGGATCCTCAAGGCGTAAGCCTCAATAGCCTTTTAAAACATGGAATATATTTAGATTGACTTCATCTTGATGAAACTTTTCACAATAAGAATGATATCTTAATTTTGAACTATACGAAATAAAGATTGCATACTTAAAAGTTAATGCACCAGCACAACCTATAGAACAAGTCATATTCAAGTAAGGACGTTACATCGTTGCAAATTGTTAGATTTGACTAAAATGTTTATTTCACCAAATGTTTTTTTTTAATCCTTCATTATTCTTCCCTCTTTTCCCTTCTTTCTATTTAAGGAATTATCGTTTGTTTTTCATGAGTTTTGTAATAGAAAGTAAAAGAATAGAGTAAGTCCGAAGCCAATAACAAAAGTAGGAGTTTCCTTGACATCTAAATGTTGTAAGGTCAGGCGGTATGTCCCATGACATTAGTCGAGGTGCAAGCTGGCCCAAACATTCCCAAATAAAAAAAAAGTAGGATAGTTTCGGTTGTAAATCGTGTTTAGTATGTTGTATGCACATATGAGACCTTATTATCTTCTATACTTGTATTTTATCTATAAAATATCACGTATCATAAAATCGTATCGAGCATATTGCAAATCATGCTTAAGAAACAAGATTGTAGACCTAGTAAGTCGTGGTATGAAACACGATGGATTTGGTAAAAATATCCCTGTTTTCTCATTTGTTCTAAGATTATTCATTATCCTTTCTAATCCACTTTAGTTATGCAAACAAAAAAACGAACTTTCTGGTTAGCCTTGTATGGTTTTGTTGATCTTCTGTTTTAATTTCATAGGTCTTGAGGCAGCCATCACAGATTACAAAGGCAATGCAGTAACCTTAAAAAATGCTAAAATAGTTGTAGAATCTGAAGATGAAAACAAGATACAAGTAAGGCTACCTCTGTGAATTAGTTTTTTTTTTTAATTCAACAATATTTGAGAGTGGGAAGATTCGAAGTGTTTGCCTATTGAATTTTTCTTTTGGTTATTTTCTTACTTTCATTCTCAATCAAGATTAGGTTCATATCATCCTTCCCTTTCACGTTTTCTTTGCTATACATTTACTATTACTGACCTTTAAAAAATGTCTCATGGAATCTAATCTACAGCTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAATTTGGCCCGCTCGGCACCGCCAATGCCCGGATTTCGTAAACAAAAAGGAGGTAAGTACCTTGATTTCCCTCTCCCTTCACATTCAATGTAACAACAATTCATTCATGCTGGAACTTAAACTTTTTACATGTTTGTCCATATAGACTAGCACTTCAGGCACCTTTCTATAGATATGAGTTCATATGCAGCTGGTTTTACAGTTCATAAGTTCTTATTTCTCGTAGCAAATGACTTAACTTTATATGGTTTCTAATGCTTTCGTGTCTTCATGCCCGTTGATGCTTTGCCAGGGAAAACATCAAATGTAAGTTGCTTCTCTTTGCTTTTTCTACTTCCTCATTGAGTTTTCCAAGACTTTTCAAAGTTGTTTAATTCTTACTCATCATCTATTATATTATATTATATGCCCCTTGTTACCTGTGATACTTTTTCCAAGGCTTTATTTCTATATAACAAATTCTTACAGGTACCAAAAAGCTTCCTCTTGGAAGTTCTTGGTGAGGACCGTGTCACAAAGTTTGTCATACAAGAAATATTAAACTCAACCATGGCGGATTATGCAAAGAAGGTAAGTTGTGTCCCTCATTGCTTTGCTTCTTATACCAGTGTATTTGTATTTGATTGTAGTTTAGGAGTAGTTTTTAGATTCATGAACACATCATTTTAAAGGATATAATGGTTGGGTGGCCTAGTAGTAAAAAGTGTCTTGGGGAGCTAAGAGATGATGGGTTCAATCTATGATGACCGATATCTAGGAATTAATTTCTTACAGGTTGTATGTCCCGTGACATTAGTCGAGATGTGTGCAAATTGGCCCGAACAGTTACGAATGAGATAAATAGTAGCAACATGGTTTATGAAATGAATTTGATACGTTACTTACAAAAATGGCATTTTGTATGTGTTTCTTTGTTTTGTCGAAGTTATTCATTTTCTTCTTTCTATTATAGGTCAAGTTGTGTCCAATCAACAAATATTTATCTAATTAGCATGTGACATTACCATTTAGTTGAAAGTATTTAGACCTTTAGGTTAGAGACTATAATCATAATTCAAAATCTGGATATGTAATTGAACTTTCCTGAAGTTTTTTTTTGAGAATAAACTTTCCTGAAGTTGATGAGGACATAGTTGACACTTAAATTTGTACATAACTGAAAATTTGTTATCCAAATATGTTTATAGTAAATCTAACCATTATAGGTTATCCAAATATGTTTATGGTAAATCTAAGCATCATAGGACTAGTGTGAACGAGAGGGTCATGGAAACCAAAAGGTTATAGGTTCAATCTACAGTGGTCACCTACCTATAAATTAATTTCTTATGAGTTTCGTTTACAACAGGTGTTGGATTAGGTGGTTTGTCTTGCGAGAATAGTTGAGGCGTTTGTTTCTTGTAAATTTGTATCTTATAAAAACATAAGCTCATTTTTTTTCTTTTTTGGCTCCAACACAGGAAAATATAAATGTAAAGGACAAGAAGATTAATACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAAACCAGGTAAAGAGTTTGGTTTCAATGCCATACTTGAGCTTGAACCTGCTTCAGAGGTTGAAAATTGAGCCAACCAGTTCTCTTTTTCCAAGTGAAGAATTTATCCATTTGTTCTTTCTTGGTCCTCTAAAGTTTTGTAACATTACTTGAATTGATTAAAGCTTGTGTATGGTTGAATGCCAATTCTAATTTTTCTTTCCTATCATTTATTTTGTTGAAGGAAAAAAACTATCTAATTATTTTGCGGTGGTCGATGGTTTGTAGTGTACTCATGACATTAATTCTAAAAAATACAAAAAAAGAAGAAGATCAATTAGC GGCGAACGGCGTCGTATTAGAGAACTTGGATAAGTGTCCATCCACAGTGTAAGAACCGAGGAGAGAAACCTGAAGCGCTTGAAAAAATGGCGTCCACAAGCGCAACGGTAATCAACATCGCTTCAGAAATCCAACGCCCAATATTCACCAAAGCTCCTGTTCATGGCTGTCGCCCCAATTCTCTTGTTTGTCTCAGCTTCGATAGCGTACAGCATGGTCTGTGCATGAGGTCGTCATTTTCTTTAAGTCTTCATTTCCGGGGTTCCAGATTTGTGTCCACAACCACGCCCATAGCTAGCTCGGGTCTTGAGGCAGCCATCACAGATTACAAAGGCAATGCAGTAACCTTAAAAAATGCTAAAATAGTTGTAGAATCTGAAGATGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAATTTGGCCCGCTCGGCACCGCCAATGCCCGGATTTCGTAAACAAAAAGGAGGGAAAACATCAAATGTACCAAAAAGCTTCCTCTTGGAAGTTCTTGGTGAGGACCGTGTCACAAAGTTTGTCATACAAGAAATATTAAACTCAACCATGGCGGATTATGCAAAGAAGGAAAATATAAATGTAAAGGACAAGAAGATTAATACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAAACCAGGTAAAGAGTTTGGTTTCAATGCCATACTTGAGCTTGAACCTGCTTCAGAGGTTGAAAATTGAGCCAACCAGTTCTCTTTTTCCAAGTGAAGAATTTATCCATTTGTTCTTTCTTGGTCCTCTAAAGTTTTGTAACATTACTTGAATTGATTAAAGCTTGTGTATGGTTGAATGCCAATTCTAATTTTTCTTTCCTATCATTTATTTTGTTGAAGGAAAAAAACTATCTAATTATTTTGCGGTGGTCGATGGTTTGTAGTGTACTCATGACATTAATTCTAAAAAATACAAAAAAAGAAGAAGATCAATTAGC ATGGCGTCCACAAGCGCAACGGTAATCAACATCGCTTCAGAAATCCAACGCCCAATATTCACCAAAGCTCCTGTTCATGGCTGTCGCCCCAATTCTCTTGTTTGTCTCAGCTTCGATAGCGTACAGCATGGTCTGTGCATGAGGTCGTCATTTTCTTTAAGTCTTCATTTCCGGGGTTCCAGATTTGTGTCCACAACCACGCCCATAGCTAGCTCGGGTCTTGAGGCAGCCATCACAGATTACAAAGGCAATGCAGTAACCTTAAAAAATGCTAAAATAGTTGTAGAATCTGAAGATGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAATTTGGCCCGCTCGGCACCGCCAATGCCCGGATTTCGTAAACAAAAAGGAGGGAAAACATCAAATGTACCAAAAAGCTTCCTCTTGGAAGTTCTTGGTGAGGACCGTGTCACAAAGTTTGTCATACAAGAAATATTAAACTCAACCATGGCGGATTATGCAAAGAAGGAAAATATAAATGTAAAGGACAAGAAGATTAATACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAAACCAGGTAAAGAGTTTGGTTTCAATGCCATACTTGAGCTTGAACCTGCTTCAGAGGTTGAAAATTGA MASTSATVINIASEIQRPIFTKAPVHGCRPNSLVCLSFDSVQHGLCMRSSFSLSLHFRGSRFVSTTTPIASSGLEAAITDYKGNAVTLKNAKIVVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGEDRVTKFVIQEILNSTMADYAKKENINVKDKKINTTQTADELKVLFKPGKEFGFNAILELEPASEVEN Homology
BLAST of Sed0014142 vs. NCBI nr
Match: XP_011656737.1 (uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hypothetical protein Csa_004841 [Cucumis sativus]) HSP 1 Score: 350.5 bits (898), Expect = 1.1e-92 Identity = 184/228 (80.70%), Postives = 200/228 (87.72%), Query Frame = 0
BLAST of Sed0014142 vs. NCBI nr
Match: XP_038906537.1 (uncharacterized protein LOC120092511 [Benincasa hispida]) HSP 1 Score: 349.4 bits (895), Expect = 2.4e-92 Identity = 185/228 (81.14%), Postives = 199/228 (87.28%), Query Frame = 0
BLAST of Sed0014142 vs. NCBI nr
Match: XP_008460020.1 (PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo]) HSP 1 Score: 346.7 bits (888), Expect = 1.5e-91 Identity = 186/229 (81.22%), Postives = 200/229 (87.34%), Query Frame = 0
BLAST of Sed0014142 vs. NCBI nr
Match: XP_023004174.1 (uncharacterized protein LOC111497577 [Cucurbita maxima]) HSP 1 Score: 334.7 bits (857), Expect = 6.0e-88 Identity = 179/228 (78.51%), Postives = 199/228 (87.28%), Query Frame = 0
BLAST of Sed0014142 vs. NCBI nr
Match: XP_022155406.1 (uncharacterized protein LOC111022553 [Momordica charantia]) HSP 1 Score: 334.0 bits (855), Expect = 1.0e-87 Identity = 177/225 (78.67%), Postives = 193/225 (85.78%), Query Frame = 0
BLAST of Sed0014142 vs. ExPASy Swiss-Prot
Match: Q118P4 (Trigger factor OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=tig PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.7e-08 Identity = 36/133 (27.07%), Postives = 78/133 (58.65%), Query Frame = 0
BLAST of Sed0014142 vs. ExPASy Swiss-Prot
Match: B1XL18 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=tig PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.9e-08 Identity = 38/133 (28.57%), Postives = 71/133 (53.38%), Query Frame = 0
BLAST of Sed0014142 vs. ExPASy Swiss-Prot
Match: Q8YQX9 (Trigger factor OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=tig PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.9e-08 Identity = 38/127 (29.92%), Postives = 70/127 (55.12%), Query Frame = 0
BLAST of Sed0014142 vs. ExPASy Swiss-Prot
Match: Q3M725 (Trigger factor OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=tig PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.9e-08 Identity = 38/127 (29.92%), Postives = 70/127 (55.12%), Query Frame = 0
BLAST of Sed0014142 vs. ExPASy Swiss-Prot
Match: B2IT89 (Trigger factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=tig PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.3e-05 Identity = 35/127 (27.56%), Postives = 68/127 (53.54%), Query Frame = 0
BLAST of Sed0014142 vs. ExPASy TrEMBL
Match: A0A0A0K988 (Trigger_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 5.1e-93 Identity = 184/228 (80.70%), Postives = 200/228 (87.72%), Query Frame = 0
BLAST of Sed0014142 vs. ExPASy TrEMBL
Match: A0A1S3CBN2 (uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 7.4e-92 Identity = 186/229 (81.22%), Postives = 200/229 (87.34%), Query Frame = 0
BLAST of Sed0014142 vs. ExPASy TrEMBL
Match: A0A6J1KVH6 (uncharacterized protein LOC111497577 OS=Cucurbita maxima OX=3661 GN=LOC111497577 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 2.9e-88 Identity = 179/228 (78.51%), Postives = 199/228 (87.28%), Query Frame = 0
BLAST of Sed0014142 vs. ExPASy TrEMBL
Match: A0A6J1DRL2 (uncharacterized protein LOC111022553 OS=Momordica charantia OX=3673 GN=LOC111022553 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 5.0e-88 Identity = 177/225 (78.67%), Postives = 193/225 (85.78%), Query Frame = 0
BLAST of Sed0014142 vs. ExPASy TrEMBL
Match: A0A6J1H8V8 (uncharacterized protein LOC111461115 OS=Cucurbita moschata OX=3662 GN=LOC111461115 PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 7.2e-87 Identity = 181/228 (79.39%), Postives = 194/228 (85.09%), Query Frame = 0
BLAST of Sed0014142 vs. TAIR 10
Match: AT2G30695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). ) HSP 1 Score: 114.4 bits (285), Expect = 1.2e-25 Identity = 53/126 (42.06%), Postives = 90/126 (71.43%), Query Frame = 0
BLAST of Sed0014142 vs. TAIR 10
Match: AT2G30695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 114.4 bits (285), Expect = 1.2e-25 Identity = 53/126 (42.06%), Postives = 90/126 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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