Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTGAAAGCCAGCAGATTTTGGAAAATTTCGAGTCTCTTTGGTTCTTCGCCACCGTATTTTCCGACCAACCGCCGCCGCCGGCCGGTATAAATCTCCAAAATCCCACTCAAAGCGACGCCGTTGAGCCAATCGGAGAAGAAATCGCGACACCCATTTTTCAAAATCAGCAAAATGTGGATGAAAGAAGAATCGAAGATTGTGATGGGTCTGAAATGAAAACAGAGGAGAAGAGAAAAAGCAGAATTAGAAGAAGATCTTGTTGTTGGAGCCAGAGGAGAAAAATTGTGGGAGAAATGGATCTGAGTAATTCTGTGAAGGAGATTTGTGAATGTTGGGTGTTGGAAGAGAGAATTAGAAATGGGAATTATTATCAGATGAAGAAGAAAAAGATGGCTTCAATTGAAGATGATATGGCGATGAAAGAGCACATTAGATCGTGGGCTTATGCAGTGGCTTGTGCTGTTAGATGA
mRNA sequence
ATGGAAACTGAAAGCCAGCAGATTTTGGAAAATTTCGAGTCTCTTTGGTTCTTCGCCACCGTATTTTCCGACCAACCGCCGCCGCCGGCCGGTATAAATCTCCAAAATCCCACTCAAAGCGACGCCGTTGAGCCAATCGGAGAAGAAATCGCGACACCCATTTTTCAAAATCAGCAAAATGTGGATGAAAGAAGAATCGAAGATTGTGATGGGTCTGAAATGAAAACAGAGGAGAAGAGAAAAAGCAGAATTAGAAGAAGATCTTGTTGTTGGAGCCAGAGGAGAAAAATTGTGGGAGAAATGGATCTGAGTAATTCTGTGAAGGAGATTTGTGAATGTTGGGTGTTGGAAGAGAGAATTAGAAATGGGAATTATTATCAGATGAAGAAGAAAAAGATGGCTTCAATTGAAGATGATATGGCGATGAAAGAGCACATTAGATCGTGGGCTTATGCAGTGGCTTGTGCTGTTAGATGA
Coding sequence (CDS)
ATGGAAACTGAAAGCCAGCAGATTTTGGAAAATTTCGAGTCTCTTTGGTTCTTCGCCACCGTATTTTCCGACCAACCGCCGCCGCCGGCCGGTATAAATCTCCAAAATCCCACTCAAAGCGACGCCGTTGAGCCAATCGGAGAAGAAATCGCGACACCCATTTTTCAAAATCAGCAAAATGTGGATGAAAGAAGAATCGAAGATTGTGATGGGTCTGAAATGAAAACAGAGGAGAAGAGAAAAAGCAGAATTAGAAGAAGATCTTGTTGTTGGAGCCAGAGGAGAAAAATTGTGGGAGAAATGGATCTGAGTAATTCTGTGAAGGAGATTTGTGAATGTTGGGTGTTGGAAGAGAGAATTAGAAATGGGAATTATTATCAGATGAAGAAGAAAAAGATGGCTTCAATTGAAGATGATATGGCGATGAAAGAGCACATTAGATCGTGGGCTTATGCAGTGGCTTGTGCTGTTAGATGA
Protein sequence
METESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNVDERRIEDCDGSEMKTEEKRKSRIRRRSCCWSQRRKIVGEMDLSNSVKEICECWVLEERIRNGNYYQMKKKKMASIEDDMAMKEHIRSWAYAVACAVR
Homology
BLAST of Sed0014101 vs. NCBI nr
Match:
XP_022927166.1 (uncharacterized protein LOC111434099 [Cucurbita moschata])
HSP 1 Score: 190.3 bits (482), Expect = 1.3e-44
Identity = 109/168 (64.88%), Postives = 123/168 (73.21%), Query Frame = 0
Query: 4 ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-D 63
E QQ+L+N +SLWFFATVFS++ PPP +Q PTQ D VEP G EIATPIFQNQQNV +
Sbjct: 2 EDQQVLQNLDSLWFFATVFSNRTPPPV---VQKPTQHDFVEPPGGEIATPIFQNQQNVGE 61
Query: 64 ERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQRRKIVGEMDLSNSVKEICECWV 123
ER I D +E + TEE+RKSR RR C QRRKIVGEMDLS++VKEICECW+
Sbjct: 62 ERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL-GQRRKIVGEMDLSDAVKEICECWL 121
Query: 124 LEERIRNGNYYQ-----MKKKKMASIEDDMAMKEHIRSWAYAVACAVR 159
LE+RI GN YQ MKKKKM ED MAMKEHIRSWAYAVAC VR
Sbjct: 122 LEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 165
BLAST of Sed0014101 vs. NCBI nr
Match:
KAG7019562.1 (hypothetical protein SDJN02_18523, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 189.9 bits (481), Expect = 1.7e-44
Identity = 108/168 (64.29%), Postives = 124/168 (73.81%), Query Frame = 0
Query: 4 ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-D 63
E QQ+L+N +SLWFFATVFS++ PPP + +Q PTQ D VEP G EIATPIFQNQQNV +
Sbjct: 2 EDQQVLQNLDSLWFFATVFSNRTPPPPPV-VQKPTQHDFVEPPGGEIATPIFQNQQNVGE 61
Query: 64 ERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQRRKIVGEMDLSNSVKEICECWV 123
ER I D +E + TEE+RKSR RR C QRRKIVGEMDLS++VKEICECW+
Sbjct: 62 ERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL-GQRRKIVGEMDLSDAVKEICECWL 121
Query: 124 LEERIRNGNYY-----QMKKKKMASIEDDMAMKEHIRSWAYAVACAVR 159
LE+RI GN Y +MKKKKM ED MAMKEHIRSWAYAVAC VR
Sbjct: 122 LEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 167
BLAST of Sed0014101 vs. NCBI nr
Match:
XP_023520136.1 (uncharacterized protein LOC111783440 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 188.7 bits (478), Expect = 3.8e-44
Identity = 109/172 (63.37%), Postives = 125/172 (72.67%), Query Frame = 0
Query: 4 ESQQILENFESLWFFATVFSDQ----PPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQ 63
E QQ+L+N +SLWFFATVFS++ PPPP +Q PTQ+D VEP G EIATPIFQNQQ
Sbjct: 2 EDQQVLQNLDSLWFFATVFSNRTPPPPPPPPPPVVQKPTQNDFVEPPGGEIATPIFQNQQ 61
Query: 64 NV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQRRKIVGEMDLSNSVKEIC 123
NV +ER I D +E + TEE+RKSR RR C QRRKIVGEMDLS++VKEIC
Sbjct: 62 NVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL-GQRRKIVGEMDLSDAVKEIC 121
Query: 124 ECWVLEERIRNGNYYQ-----MKKKKMASIEDDMAMKEHIRSWAYAVACAVR 159
ECW+LE+RI GN YQ MKKKKM ED MAMKEHIRSWA+AVAC VR
Sbjct: 122 ECWLLEQRIGGGNQYQRGRRKMKKKKMPPFEDSMAMKEHIRSWAFAVACIVR 172
BLAST of Sed0014101 vs. NCBI nr
Match:
XP_038895160.1 (uncharacterized protein LOC120083464 [Benincasa hispida])
HSP 1 Score: 188.7 bits (478), Expect = 3.8e-44
Identity = 105/163 (64.42%), Postives = 122/163 (74.85%), Query Frame = 0
Query: 4 ESQQILENFESLWFFATVFSDQ-PPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQN-- 63
E QQ+LEN++SLWFFATVFS++ PPPP ++NPTQ+D VEP GEEIATP+ N+QN
Sbjct: 2 EGQQVLENWDSLWFFATVFSNRTPPPPPPPVVENPTQNDFVEPPGEEIATPLTPNEQNNV 61
Query: 64 VDERRIEDCDGSEMKTEEKRKSRIRRRSCCW--SQRRKIVGEMDLSNSVKEICECWVLEE 123
DE++IE+ G +KTEEK + R R CW QRRKIVGEMDLS +VKEICECW+ EE
Sbjct: 62 GDEKKIENGGGFGIKTEEKEQRRKNRGRRCWGLEQRRKIVGEMDLSYAVKEICECWLFEE 121
Query: 124 -RIRNGNYYQMKK--KKMASIEDDMAMKEHIRSWAYAVACAVR 159
RI GN YQ KK KKM ED MAMKEHIRSWAYAVAC VR
Sbjct: 122 TRIGGGNQYQRKKKTKKMPPFEDSMAMKEHIRSWAYAVACTVR 164
BLAST of Sed0014101 vs. NCBI nr
Match:
KAG6583945.1 (hypothetical protein SDJN03_19877, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 187.2 bits (474), Expect = 1.1e-43
Identity = 108/170 (63.53%), Postives = 124/170 (72.94%), Query Frame = 0
Query: 4 ESQQILENFESLWFFATVFSDQ--PPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV 63
E QQ+L+N +SLWFFATVFS++ PPPP +Q PTQ+D EP G EIATPIFQNQQNV
Sbjct: 2 EDQQVLQNLDSLWFFATVFSNRTPPPPPPPPVVQKPTQNDFDEPPGGEIATPIFQNQQNV 61
Query: 64 -DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQRRKIVGEMDLSNSVKEICEC 123
+ER I D +E + TEE+RKSR RR C QRRKIVGEMDLS++VKEICEC
Sbjct: 62 GEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL-GQRRKIVGEMDLSDAVKEICEC 121
Query: 124 WVLEERIRNGNYY-----QMKKKKMASIEDDMAMKEHIRSWAYAVACAVR 159
W+LE+RI GN Y +MKKKKM ED MAMKEHIRSWAYAVAC VR
Sbjct: 122 WLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 170
BLAST of Sed0014101 vs. ExPASy TrEMBL
Match:
A0A6J1EGY0 (uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC111434099 PE=4 SV=1)
HSP 1 Score: 190.3 bits (482), Expect = 6.3e-45
Identity = 109/168 (64.88%), Postives = 123/168 (73.21%), Query Frame = 0
Query: 4 ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-D 63
E QQ+L+N +SLWFFATVFS++ PPP +Q PTQ D VEP G EIATPIFQNQQNV +
Sbjct: 2 EDQQVLQNLDSLWFFATVFSNRTPPPV---VQKPTQHDFVEPPGGEIATPIFQNQQNVGE 61
Query: 64 ERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQRRKIVGEMDLSNSVKEICECWV 123
ER I D +E + TEE+RKSR RR C QRRKIVGEMDLS++VKEICECW+
Sbjct: 62 ERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL-GQRRKIVGEMDLSDAVKEICECWL 121
Query: 124 LEERIRNGNYYQ-----MKKKKMASIEDDMAMKEHIRSWAYAVACAVR 159
LE+RI GN YQ MKKKKM ED MAMKEHIRSWAYAVAC VR
Sbjct: 122 LEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 165
BLAST of Sed0014101 vs. ExPASy TrEMBL
Match:
A0A6J1KF61 (uncharacterized protein LOC111495257 OS=Cucurbita maxima OX=3661 GN=LOC111495257 PE=4 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 5.0e-42
Identity = 106/172 (61.63%), Postives = 123/172 (71.51%), Query Frame = 0
Query: 4 ESQQILENFESLWFFATVFSDQ----PPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQ 63
E QQ+L+N +SLWFFATVFS++ PP P +Q PT++D VE G EIATPIFQNQQ
Sbjct: 2 EDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQQ 61
Query: 64 NV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQRRKIVGEMDLSNSVKEIC 123
NV DER I D +E + TEE+RKSR RR C QRR+IVGEMDLS++VKEIC
Sbjct: 62 NVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCL-RQRREIVGEMDLSDAVKEIC 121
Query: 124 ECWVLEERIRNGNYYQ-----MKKKKMASIEDDMAMKEHIRSWAYAVACAVR 159
ECW+LE+RI GN YQ MKKKK+ ED MAMKEHIRSWAYAVAC VR
Sbjct: 122 ECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 172
BLAST of Sed0014101 vs. ExPASy TrEMBL
Match:
A0A0A0LX63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1)
HSP 1 Score: 152.5 bits (384), Expect = 1.4e-33
Identity = 91/160 (56.88%), Postives = 108/160 (67.50%), Query Frame = 0
Query: 4 ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNVDE 63
E QQ+LENF+SLWFFATVFS++ PP G P Q+D V +GEEIATPI +N++N
Sbjct: 2 EGQQVLENFDSLWFFATVFSNRTPPVVG----KPIQNDFVGSLGEEIATPITRNEEN--- 61
Query: 64 RRIEDCDGSEMKTEEKRKSRIRR---RSCCWSQRRK-IVGEMDLSNSVKEICECWVLEE- 123
C+ EM+TEE+ + R + RS QR+K IVGE+DLS +VKEICECW EE
Sbjct: 62 ---NVCEAKEMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEM 121
Query: 124 RIRNGNYYQMKKKKMASIEDDMAMKEHIRSWAYAVACAVR 159
RI G K KKM S ED MAMKEHIRSWAYAVAC VR
Sbjct: 122 RIGGGE----KTKKMPSFEDSMAMKEHIRSWAYAVACTVR 147
BLAST of Sed0014101 vs. ExPASy TrEMBL
Match:
A0A5A7UQZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002450 PE=4 SV=1)
HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33
Identity = 90/157 (57.32%), Postives = 109/157 (69.43%), Query Frame = 0
Query: 4 ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNVDE 63
E QQ+ ENF+SLWFF+TVFS++ PP ++ P Q+D VEP+GEEIATPI +N++N D
Sbjct: 2 EGQQVFENFDSLWFFSTVFSNRTPPV----VEKPIQNDFVEPLGEEIATPITRNEEN-DV 61
Query: 64 RRIEDCDGSEMKTEEKRKSRIRRRSCCWSQRRK-IVGEMDLSNSVKEICECWVLE-ERIR 123
++ + EM EEKR+ RRS QRRK +VGE+DLS +VKEICECW E RI
Sbjct: 62 GEEKEMETEEM--EEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIG 121
Query: 124 NGNYYQMKKKKMASIEDDMAMKEHIRSWAYAVACAVR 159
G K KKM S ED MAMKEHIRSWAYAVAC VR
Sbjct: 122 GGK----KTKKMPSFEDSMAMKEHIRSWAYAVACTVR 147
BLAST of Sed0014101 vs. ExPASy TrEMBL
Match:
A0A1S3B8X4 (uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=4 SV=1)
HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33
Identity = 90/157 (57.32%), Postives = 109/157 (69.43%), Query Frame = 0
Query: 4 ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNVDE 63
E QQ+ ENF+SLWFF+TVFS++ PP ++ P Q+D VEP+GEEIATPI +N++N D
Sbjct: 2 EGQQVFENFDSLWFFSTVFSNRTPPV----VEKPIQNDFVEPLGEEIATPITRNEEN-DV 61
Query: 64 RRIEDCDGSEMKTEEKRKSRIRRRSCCWSQRRK-IVGEMDLSNSVKEICECWVLE-ERIR 123
++ + EM EEKR+ RRS QRRK +VGE+DLS +VKEICECW E RI
Sbjct: 62 GEEKEMETEEM--EEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIG 121
Query: 124 NGNYYQMKKKKMASIEDDMAMKEHIRSWAYAVACAVR 159
G K KKM S ED MAMKEHIRSWAYAVAC VR
Sbjct: 122 GGK----KTKKMPSFEDSMAMKEHIRSWAYAVACTVR 147
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022927166.1 | 1.3e-44 | 64.88 | uncharacterized protein LOC111434099 [Cucurbita moschata] | [more] |
KAG7019562.1 | 1.7e-44 | 64.29 | hypothetical protein SDJN02_18523, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023520136.1 | 3.8e-44 | 63.37 | uncharacterized protein LOC111783440 [Cucurbita pepo subsp. pepo] | [more] |
XP_038895160.1 | 3.8e-44 | 64.42 | uncharacterized protein LOC120083464 [Benincasa hispida] | [more] |
KAG6583945.1 | 1.1e-43 | 63.53 | hypothetical protein SDJN03_19877, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1EGY0 | 6.3e-45 | 64.88 | uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC1114340... | [more] |
A0A6J1KF61 | 5.0e-42 | 61.63 | uncharacterized protein LOC111495257 OS=Cucurbita maxima OX=3661 GN=LOC111495257... | [more] |
A0A0A0LX63 | 1.4e-33 | 56.88 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1 | [more] |
A0A5A7UQZ2 | 3.2e-33 | 57.32 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3B8X4 | 3.2e-33 | 57.32 | uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=... | [more] |
Match Name | E-value | Identity | Description | |