Sed0014076 (gene) Chayote v1

Overview
NameSed0014076
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG08: 1310244 .. 1311791 (-)
RNA-Seq ExpressionSed0014076
SyntenySed0014076
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTTTCTAAACCGCACAAAATCCAACTCTTCACTTTCTCTATGTTCCCAACTTCACAGAAAATTCCCTCATTTTCTGCATTTCCCCAAGTTCATACGTAGTTCCGATCAAGAACCGGCCATCAACACAGTACCCAACGGCAGCTATTTCGCCAAGGAACAAAGATTTCAGTTTCTTTTCCGGCAATGCTCCACCGTGAAAGATTTGAATCAAATCCACGCCCGTGTCATCCAGTTGGGTTTCGATCAAAATCTCTTCGTTATTGGCAAACTCATCGAATTCTGCGCGGTTTCGGATCACGGCGACATGAATTACGCTGTTCTTGTATTTGACAGAATCGAGAATCCAGATGGGTTTCTTTGGAATACAATGATAAGGGGATTTGGAAGAATTTGTGAGCTGCAAAAGGGGTTTGAGTTTTATAAGAGAATGGTAAACAGGGGAATCAGGGGAGATAATTTCACTTTTTGTTTCTTACTGAAGATTTCTGGGCAATTGGGTTCGATTATGTTGGGAAATCAGTTGCATGTTTGTATTTTGAAACTTGGGTTTGAATCCCATGTGTATGTGAGGAACACGCTTGTTCATATGTATGGCAGGTTGAAAGAAATTAGAATTGCACGCAACCTGTTTGATGAAATGCCCAGTCCAGATTTAGTGGCTTGGAATACGCTCATCGACTGTTATGTCTCTTGTGGGATGTATAATGAAGCACTTGGCTTGTTTGTTCAGTTGTTGCAGAGTGGTGTAGAGCCTGACGAAGCGACACTAGTTGTAACCATCTCGGGATGTTCGGCTTTGGGTGCACTCGACTTTGGGAGGTGGGTTCATTCCCATGTGAAGCGTAACGGTAGAGGGAAAACTATAGCTGTTTGCAATTCATTGATCGACATGTACGCCAAGTGTGGTGCGGTCGAAGATTCGCGTGAGATGTTCTACTCAATGAGCGACAAGAATGTGGTAACATGGAATACTATGATCATGGCATTGGCAACACATGGTGATGCAGAGGATGCACTGATATTATTCTCAAAGATGTTAGCAGAGAAGGTTGAGGTTCCTGATGATGTAACTTTCTTGGGAGTGTTGTGTGCTTGTAACCATGGAGGAAAGGTGGAGGAAGGGAGGAGGTATTTTGATCTTATGACCAAATACTTCAATATCCAGCCCACTCTCAAGCACTATGGATCCATGGTGGATATTCTTGGGCGAGCTGGGTTTGTTGAAGAAGCTTATCAGTTGATAAAGAGCATGCCAATGGATTGTAATGCTATTATATGGAGAACGTTACTCGCCGCATGTCGGATGCATGGAAACGTTAAACTCGGGGAGAGAGTAAGGAGCCATGTTCTGGAAATAGAACCAGATCATAGTAGTGATTATGTTCTTCTTGCAAATATGTATGCAAGCTCTGGTCAATGGAATGATACGATGAAGATAAGAAAATCAATGCACCGAAAAGGAGTGCAGAAACCGGAGCCTGGTAATAGTTATTTGGATATCAATCCGCAAGGGAAGTTGGAGTTGGAAACTGTTGAGAATTGA

mRNA sequence

ATGATCTTTCTAAACCGCACAAAATCCAACTCTTCACTTTCTCTATGTTCCCAACTTCACAGAAAATTCCCTCATTTTCTGCATTTCCCCAAGTTCATACGTAGTTCCGATCAAGAACCGGCCATCAACACAGTACCCAACGGCAGCTATTTCGCCAAGGAACAAAGATTTCAGTTTCTTTTCCGGCAATGCTCCACCGTGAAAGATTTGAATCAAATCCACGCCCGTGTCATCCAGTTGGGTTTCGATCAAAATCTCTTCGTTATTGGCAAACTCATCGAATTCTGCGCGGTTTCGGATCACGGCGACATGAATTACGCTGTTCTTGTATTTGACAGAATCGAGAATCCAGATGGGTTTCTTTGGAATACAATGATAAGGGGATTTGGAAGAATTTGTGAGCTGCAAAAGGGGTTTGAGTTTTATAAGAGAATGGTAAACAGGGGAATCAGGGGAGATAATTTCACTTTTTGTTTCTTACTGAAGATTTCTGGGCAATTGGGTTCGATTATGTTGGGAAATCAGTTGCATGTTTGTATTTTGAAACTTGGGTTTGAATCCCATGTGTATGTGAGGAACACGCTTGTTCATATGTATGGCAGGTTGAAAGAAATTAGAATTGCACGCAACCTGTTTGATGAAATGCCCAGTCCAGATTTAGTGGCTTGGAATACGCTCATCGACTGTTATGTCTCTTGTGGGATGTATAATGAAGCACTTGGCTTGTTTGTTCAGTTGTTGCAGAGTGGTGTAGAGCCTGACGAAGCGACACTAGTTGTAACCATCTCGGGATGTTCGGCTTTGGGTGCACTCGACTTTGGGAGGTGGGTTCATTCCCATGTGAAGCGTAACGGTAGAGGGAAAACTATAGCTGTTTGCAATTCATTGATCGACATGTACGCCAAGTGTGGTGCGGTCGAAGATTCGCGTGAGATGTTCTACTCAATGAGCGACAAGAATGTGGTAACATGGAATACTATGATCATGGCATTGGCAACACATGGTGATGCAGAGGATGCACTGATATTATTCTCAAAGATGTTAGCAGAGAAGGTTGAGGTTCCTGATGATGTAACTTTCTTGGGAGTGTTGTGTGCTTGTAACCATGGAGGAAAGGTGGAGGAAGGGAGGAGGTATTTTGATCTTATGACCAAATACTTCAATATCCAGCCCACTCTCAAGCACTATGGATCCATGGTGGATATTCTTGGGCGAGCTGGGTTTGTTGAAGAAGCTTATCAGTTGATAAAGAGCATGCCAATGGATTGTAATGCTATTATATGGAGAACGTTACTCGCCGCATGTCGGATGCATGGAAACGTTAAACTCGGGGAGAGAGTAAGGAGCCATGTTCTGGAAATAGAACCAGATCATAGTAGTGATTATGTTCTTCTTGCAAATATGTATGCAAGCTCTGGTCAATGGAATGATACGATGAAGATAAGAAAATCAATGCACCGAAAAGGAGTGCAGAAACCGGAGCCTGGTAATAGTTATTTGGATATCAATCCGCAAGGGAAGTTGGAGTTGGAAACTGTTGAGAATTGA

Coding sequence (CDS)

ATGATCTTTCTAAACCGCACAAAATCCAACTCTTCACTTTCTCTATGTTCCCAACTTCACAGAAAATTCCCTCATTTTCTGCATTTCCCCAAGTTCATACGTAGTTCCGATCAAGAACCGGCCATCAACACAGTACCCAACGGCAGCTATTTCGCCAAGGAACAAAGATTTCAGTTTCTTTTCCGGCAATGCTCCACCGTGAAAGATTTGAATCAAATCCACGCCCGTGTCATCCAGTTGGGTTTCGATCAAAATCTCTTCGTTATTGGCAAACTCATCGAATTCTGCGCGGTTTCGGATCACGGCGACATGAATTACGCTGTTCTTGTATTTGACAGAATCGAGAATCCAGATGGGTTTCTTTGGAATACAATGATAAGGGGATTTGGAAGAATTTGTGAGCTGCAAAAGGGGTTTGAGTTTTATAAGAGAATGGTAAACAGGGGAATCAGGGGAGATAATTTCACTTTTTGTTTCTTACTGAAGATTTCTGGGCAATTGGGTTCGATTATGTTGGGAAATCAGTTGCATGTTTGTATTTTGAAACTTGGGTTTGAATCCCATGTGTATGTGAGGAACACGCTTGTTCATATGTATGGCAGGTTGAAAGAAATTAGAATTGCACGCAACCTGTTTGATGAAATGCCCAGTCCAGATTTAGTGGCTTGGAATACGCTCATCGACTGTTATGTCTCTTGTGGGATGTATAATGAAGCACTTGGCTTGTTTGTTCAGTTGTTGCAGAGTGGTGTAGAGCCTGACGAAGCGACACTAGTTGTAACCATCTCGGGATGTTCGGCTTTGGGTGCACTCGACTTTGGGAGGTGGGTTCATTCCCATGTGAAGCGTAACGGTAGAGGGAAAACTATAGCTGTTTGCAATTCATTGATCGACATGTACGCCAAGTGTGGTGCGGTCGAAGATTCGCGTGAGATGTTCTACTCAATGAGCGACAAGAATGTGGTAACATGGAATACTATGATCATGGCATTGGCAACACATGGTGATGCAGAGGATGCACTGATATTATTCTCAAAGATGTTAGCAGAGAAGGTTGAGGTTCCTGATGATGTAACTTTCTTGGGAGTGTTGTGTGCTTGTAACCATGGAGGAAAGGTGGAGGAAGGGAGGAGGTATTTTGATCTTATGACCAAATACTTCAATATCCAGCCCACTCTCAAGCACTATGGATCCATGGTGGATATTCTTGGGCGAGCTGGGTTTGTTGAAGAAGCTTATCAGTTGATAAAGAGCATGCCAATGGATTGTAATGCTATTATATGGAGAACGTTACTCGCCGCATGTCGGATGCATGGAAACGTTAAACTCGGGGAGAGAGTAAGGAGCCATGTTCTGGAAATAGAACCAGATCATAGTAGTGATTATGTTCTTCTTGCAAATATGTATGCAAGCTCTGGTCAATGGAATGATACGATGAAGATAAGAAAATCAATGCACCGAAAAGGAGTGCAGAAACCGGAGCCTGGTAATAGTTATTTGGATATCAATCCGCAAGGGAAGTTGGAGTTGGAAACTGTTGAGAATTGA

Protein sequence

MIFLNRTKSNSSLSLCSQLHRKFPHFLHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQFLFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDGFLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVCILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEALGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDMYAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVTFLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTMKIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN
Homology
BLAST of Sed0014076 vs. NCBI nr
Match: XP_022987183.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita maxima] >XP_022987184.1 pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 874.4 bits (2258), Expect = 4.9e-250
Identity = 418/516 (81.01%), Postives = 460/516 (89.15%), Query Frame = 0

Query: 1   MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
           MI LN  KSN +LSLCS++  KFPHF L  PK+I SSD +   +T+PNGSYF+KEQRF  
Sbjct: 1   MIVLNGGKSNLALSLCSRVEIKFPHFQLLLPKYIWSSDPKTPTDTIPNGSYFSKEQRFLS 60

Query: 61  LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
           LF+QCS VKDLNQ+HAR IQ GFDQNLFV+GKLIEFCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61  LFKQCSAVKDLNQLHARTIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
           FLWNTMIRGFGRI  L K FEFYKRM+ +GI  DNFTF FLLKISGQLGSIML  QLH  
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLAKQLHAN 180

Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
           ILKLG +SHVYVRNTL+HMYGRLK++++ARNLFDEMP P LVAWNT+IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
           L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVK N RGKTIAV NSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
           YAKCGAVED+REMF + S KN+VTWNTMIM LATHGD EDAL LFS MLAEK+  PD VT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLGVLCACNHGGKVEEGRRYFDLMTK+ +IQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCDIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
           PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWN+ M
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
           K+RKSM RKGVQKPEPGNS+L+INP  KLE++TVEN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMDTVEN 516

BLAST of Sed0014076 vs. NCBI nr
Match: XP_023516362.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 872.5 bits (2253), Expect = 1.8e-249
Identity = 417/516 (80.81%), Postives = 459/516 (88.95%), Query Frame = 0

Query: 1   MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
           MI LN  KSN + SLCS++  KFPHF L  PKFI SSD++     +PNGSYF+KEQRF  
Sbjct: 1   MIVLNGGKSNLARSLCSRVEIKFPHFQLLLPKFIWSSDRKTPTEAIPNGSYFSKEQRFLS 60

Query: 61  LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
           LF+QCS VKDLNQ+HAR I+ GFDQNLFV+GKLIEFCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61  LFKQCSAVKDLNQVHARTIRSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
           FLWNTMIRGFGRI  L K FEFYKRM+ +GI  DNFTF FLLKISGQLGSIMLG QLHV 
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLGKQLHVN 180

Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
           ILKLG +SHVYVRNTL+HMYG LK++++ARNLFDEMP P LVAWNT+IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGSLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
           L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVK N RGKTIAV NSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
           YAKCGAVE++REMF + S KN+VTWNTMIM LATHGD EDAL LFS MLAEK+  PD VT
Sbjct: 301 YAKCGAVEEAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLGVLCACNHGGKVEEGRRYFDLMTK+ NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
           PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWN+ M
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
           K+RKSM RKGVQKPEPGNS+L+INP  KLE++TVEN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMDTVEN 516

BLAST of Sed0014076 vs. NCBI nr
Match: KAG6589516.1 (Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 871.3 bits (2250), Expect = 4.1e-249
Identity = 418/516 (81.01%), Postives = 459/516 (88.95%), Query Frame = 0

Query: 1   MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
           MI LN  KSN + SL S++  KFPHF L  PKFI SSD++   + +PNG YF+KEQRF  
Sbjct: 1   MIVLNGGKSNLARSLFSRVQIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60

Query: 61  LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
           LF+QCS VKDLNQ+HAR+IQ GFDQNLFV+GKLIEFCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61  LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
           FLWNTMIRGFGRI  L K FEFYKRM+ +GI  DNFTF FLLKI GQLGSIMLG QLHV 
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180

Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
           ILKLG +SHVYVRNTL+HMYGRLK++++ARNLFDEMP P LVAWNT+IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
           L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVK N RGKTIAV NSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
           YAKCGAVED+REMF + S KN+VTWNTMIM LATHGD EDAL LFS MLAEK+  PD VT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLGVLCACNHGGKVEEGRRYFDLMTK+ NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
           PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWN+ M
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
           K+RKSM RKGVQKPEPGNS+L+INP  KLE+ETVEN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVEN 516

BLAST of Sed0014076 vs. NCBI nr
Match: KAG7023204.1 (Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 871.3 bits (2250), Expect = 4.1e-249
Identity = 418/516 (81.01%), Postives = 459/516 (88.95%), Query Frame = 0

Query: 1   MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
           MI LN  KSN + SL S++  KFPHF L  PKFI SSD++   + +PNG YF+KEQRF  
Sbjct: 1   MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60

Query: 61  LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
           LF+QCS VKDLNQ+HAR+IQ GFDQNLFV+GKLIEFCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61  LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
           FLWNTMIRGFGRI  L K FEFYKRM+ +GI  DNFTF FLLKI GQLGSIMLG QLHV 
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180

Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
           ILKLG +SHVYVRNTL+HMYGRLK++++ARNLFDEMP P LVAWNT+IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
           L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVK N RGKTIAV NSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
           YAKCGAVED+REMF + S KN+VTWNTMIM LATHGD EDAL LFS MLAEK+  PD VT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLGVLCACNHGGKVEEGRRYFDLMTK+ NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
           PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWN+ M
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
           K+RKSM RKGVQKPEPGNS+L+INP  KLE+ETVEN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVEN 516

BLAST of Sed0014076 vs. NCBI nr
Match: XP_038880037.1 (pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida])

HSP 1 Score: 869.4 bits (2245), Expect = 1.6e-248
Identity = 416/504 (82.54%), Postives = 459/504 (91.07%), Query Frame = 0

Query: 1   MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
           MI +   K+N +LSL SQ+  KFPHF L  PKF+ SSD++ A +T+PNGSYFAKEQRF  
Sbjct: 1   MIVITSRKANLALSLFSQVKFKFPHFQLLVPKFVWSSDRKTATDTIPNGSYFAKEQRFLS 60

Query: 61  LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
           L +QCSTVKDLNQ+HAR+IQLGFDQNLFVIGKLIEFCAVS++GDMNYAV+VF+ IENPDG
Sbjct: 61  LSKQCSTVKDLNQLHARIIQLGFDQNLFVIGKLIEFCAVSNYGDMNYAVVVFNGIENPDG 120

Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
           FLWNTMIRGFGRI +L K FEFYKRM+ +GI  DNFTF FLLKISGQ GSIMLG QLHV 
Sbjct: 121 FLWNTMIRGFGRISKLLKAFEFYKRMLEKGIAADNFTFSFLLKISGQSGSIMLGKQLHVN 180

Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
           ILK+G +SHVYVRNTL+HMYGRLK+++IARNLFDEMP PDLVAWN +IDC+VSCGMY+EA
Sbjct: 181 ILKVGLDSHVYVRNTLIHMYGRLKDVKIARNLFDEMPKPDLVAWNAVIDCHVSCGMYSEA 240

Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
           LGLF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVKRN +GKTIAV NSLIDM
Sbjct: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKRNDKGKTIAVLNSLIDM 300

Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
           YAKCGAVED+REMF +MSDKNVVTWNTMIM LATHGDAEDAL LFS MLA+KVE PD VT
Sbjct: 301 YAKCGAVEDAREMFNAMSDKNVVTWNTMIMGLATHGDAEDALTLFSNMLAKKVETPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLGVLCACNHGGKVEEGR YF LMTK+FNIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGREYFHLMTKHFNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
           PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWN+ +
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KIRKSMHRKGVQKPEPGNSYLDIN 504
           K RKSM RKGVQKPEPGNSYL+IN
Sbjct: 481 KTRKSMQRKGVQKPEPGNSYLEIN 504

BLAST of Sed0014076 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 370.2 bits (949), Expect = 3.9e-101
Identity = 183/442 (41.40%), Postives = 283/442 (64.03%), Query Frame = 0

Query: 65  STVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVS--DHGDMNYAVLVFDRIENP-DGFL 124
           S++  L QIHA  I+ G   +   +GK + F  VS      M+YA  VF +IE P + F+
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 125 WNTMIRGFGRICELQKGFEFYKRM-VNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVCI 184
           WNT+IRG+  I      F  Y+ M V+  +  D  T+ FL+K    +  + LG  +H  +
Sbjct: 88  WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147

Query: 185 LKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEAL 244
           ++ GF S +YV+N+L+H+Y    ++  A  +FD+MP  DLVAWN++I+ +   G   EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207

Query: 245 GLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDMY 304
            L+ ++   G++PD  T+V  +S C+ +GAL  G+ VH ++ + G  + +   N L+D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267

Query: 305 AKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVTF 364
           A+CG VE+++ +F  M DKN V+W ++I+ LA +G  ++A+ LF  M + +  +P ++TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327

Query: 365 LGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMP 424
           +G+L AC+H G V+EG  YF  M + + I+P ++H+G MVD+L RAG V++AY+ IKSMP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387

Query: 425 MDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTMK 484
           M  N +IWRTLL AC +HG+  L E  R  +L++EP+HS DYVLL+NMYAS  +W+D  K
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447

Query: 485 IRKSMHRKGVQKPEPGNSYLDI 503
           IRK M R GV+K  PG+S +++
Sbjct: 448 IRKQMLRDGVKK-VPGHSLVEV 468

BLAST of Sed0014076 vs. ExPASy Swiss-Prot
Match: Q0WQW5 (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 357.1 bits (915), Expect = 3.4e-97
Identity = 185/466 (39.70%), Postives = 281/466 (60.30%), Query Frame = 0

Query: 55  QRFQFLFRQCSTVKDLNQIHARVIQLGFDQ---NLFVIGKLIEFCAVSDHGDMNYAVLVF 114
           QR   L   CS +  L Q+HA  ++  + +    LF+ GK+++    S   D+NYA  VF
Sbjct: 49  QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 108

Query: 115 DRIENPDGFLWNTMIRGFGR-ICELQKGFEFYKRMVNRGIRG-DNFTFCFLLKISGQLGS 174
           D IEN   F+WNT+IR     +   ++ F  Y++M+ RG    D  TF F+LK    +  
Sbjct: 109 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 168

Query: 175 IMLGNQLHVCILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDC 234
              G Q+H  I+K GF   VYV N L+H+YG    + +AR +FDEMP   LV+WN++ID 
Sbjct: 169 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 228

Query: 235 YVSCGMYNEALGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRN---GR 294
            V  G Y+ AL LF + +Q   EPD  T+   +S C+ LG+L  G W H+ + R      
Sbjct: 229 LVRFGEYDSALQLFRE-MQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 288

Query: 295 GKTIAVCNSLIDMYAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSK 354
              + V NSLI+MY KCG++  + ++F  M  +++ +WN MI+  ATHG AE+A+  F +
Sbjct: 289 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 348

Query: 355 MLAEKVEV-PDDVTFLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGR 414
           M+ ++  V P+ VTF+G+L ACNH G V +GR+YFD+M + + I+P L+HYG +VD++ R
Sbjct: 349 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 408

Query: 415 AGFVEEAYQLIKSMPMDCNAIIWRTLL-AACRMHGNVKLGERVRSHVLEIEPDHSSD--- 474
           AG++ EA  ++ SMPM  +A+IWR+LL A C+   +V+L E +  +++  + D+ S    
Sbjct: 409 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 468

Query: 475 ----YVLLANMYASSGQWNDTMKIRKSMHRKGVQKPEPGNSYLDIN 504
               YVLL+ +YAS+ +WND   +RK M   G++K EPG S ++IN
Sbjct: 469 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK-EPGCSSIEIN 510

BLAST of Sed0014076 vs. ExPASy Swiss-Prot
Match: Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 356.3 bits (913), Expect = 5.8e-97
Identity = 177/446 (39.69%), Postives = 276/446 (61.88%), Query Frame = 0

Query: 60  LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVS-DHGDMNYAVLVFDRIENPD 119
           L  +C+++++L QI A  I+   +   FV  KLI FC  S     M+YA  +F+ +  PD
Sbjct: 35  LISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEAMSEPD 94

Query: 120 GFLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHV 179
             ++N+M RG+ R     + F  +  ++  GI  DN+TF  LLK      ++  G QLH 
Sbjct: 95  IVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHC 154

Query: 180 CILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNE 239
             +KLG + +VYV  TL++MY   +++  AR +FD +  P +V +N +I  Y      NE
Sbjct: 155 LSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNE 214

Query: 240 ALGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLID 299
           AL LF ++    ++P+E TL+  +S C+ LG+LD G+W+H + K++   K + V  +LID
Sbjct: 215 ALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALID 274

Query: 300 MYAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDV 359
           M+AKCG+++D+  +F  M  K+   W+ MI+A A HG AE ++++F +M +E V+ PD++
Sbjct: 275 MFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ-PDEI 334

Query: 360 TFLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKS 419
           TFLG+L AC+H G+VEEGR+YF  M   F I P++KHYGSMVD+L RAG +E+AY+ I  
Sbjct: 335 TFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDK 394

Query: 420 MPMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDT 479
           +P+    ++WR LLAAC  H N+ L E+V   + E++  H  DYV+L+N+YA + +W   
Sbjct: 395 LPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYV 454

Query: 480 MKIRKSM-HRKGVQKPEPGNSYLDIN 504
             +RK M  RK V+   PG S +++N
Sbjct: 455 DSLRKVMKDRKAVK--VPGCSSIEVN 476

BLAST of Sed0014076 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 4.6e-94
Identity = 179/481 (37.21%), Postives = 282/481 (58.63%), Query Frame = 0

Query: 57  FQFLFRQCS---TVKDLNQIHARVIQLGFDQNLFVIGKLIEFCA-------------VSD 116
           F F+ + C+     K+  QIH  V++LG D +L+V   LI                  S 
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196

Query: 117 HGD-MNYAVLV---------------FDRIENPDGFLWNTMIRGFGRICELQKGFEFYKR 176
           H D ++Y  L+               FD I   D   WN MI G+      ++  E +K 
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256

Query: 177 MVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVCILKLGFESHVYVRNTLVHMYGRLKE 236
           M+   +R D  T   ++    Q GSI LG Q+H+ I   GF S++ + N L+ +Y +  E
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316

Query: 237 IRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEALGLFVQLLQSGVEPDEATLVVTISG 296
           +  A  LF+ +P  D+++WNTLI  Y    +Y EAL LF ++L+SG  P++ T++  +  
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376

Query: 297 CSALGALDFGRWVHSHVKRNGRGKTIA--VCNSLIDMYAKCGAVEDSREMFYSMSDKNVV 356
           C+ LGA+D GRW+H ++ +  +G T A  +  SLIDMYAKCG +E + ++F S+  K++ 
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436

Query: 357 TWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVTFLGVLCACNHGGKVEEGRRYFDL 416
           +WN MI   A HG A+ +  LFS+M    ++ PDD+TF+G+L AC+H G ++ GR  F  
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQ-PDDITFVGLLSACSHSGMLDLGRHIFRT 496

Query: 417 MTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMDCNAIIWRTLLAACRMHGNVK 476
           MT+ + + P L+HYG M+D+LG +G  +EA ++I  M M+ + +IW +LL AC+MHGNV+
Sbjct: 497 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVE 556

Query: 477 LGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTMKIRKSMHRKGVQKPEPGNSYLDI 504
           LGE    ++++IEP++   YVLL+N+YAS+G+WN+  K R  ++ KG++K  PG S ++I
Sbjct: 557 LGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK-VPGCSSIEI 615

BLAST of Sed0014076 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 6.7e-93
Identity = 168/482 (34.85%), Postives = 280/482 (58.09%), Query Frame = 0

Query: 54  EQRFQFLFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDR 113
           E  F    ++  +  +  +I+A +I  G  Q+ F++ K+++FC   +  DM+YA  +F++
Sbjct: 10  ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIE--DMDYATRLFNQ 69

Query: 114 IENPDGFLWNTMIRGFGRICELQKGFEFYKRMVNRGIR-GDNFTFCFLLKISGQLGSIML 173
           + NP+ FL+N++IR +            YK+++ +     D FTF F+ K    LGS  L
Sbjct: 70  VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 129

Query: 174 GNQLHVCILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTL------ 233
           G Q+H  + K G   HV   N L+ MY +  ++  A  +FDEM   D+++WN+L      
Sbjct: 130 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 189

Query: 234 -------------------------IDCYVSCGMYNEALGLFVQLLQSGVEPDEATLVVT 293
                                    I  Y   G Y EA+  F ++  +G+EPDE +L+  
Sbjct: 190 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 249

Query: 294 ISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDMYAKCGAVEDSREMFYSMSDKNV 353
           +  C+ LG+L+ G+W+H + +R G  K   VCN+LI+MY+KCG +  + ++F  M  K+V
Sbjct: 250 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 309

Query: 354 VTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVTFLGVLCACNHGGKVEEGRRYFD 413
           ++W+TMI   A HG+A  A+  F++M   KV+ P+ +TFLG+L AC+H G  +EG RYFD
Sbjct: 310 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVK-PNGITFLGLLSACSHVGMWQEGLRYFD 369

Query: 414 LMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMDCNAIIWRTLLAACRMHGNV 473
           +M + + I+P ++HYG ++D+L RAG +E A ++ K+MPM  ++ IW +LL++CR  GN+
Sbjct: 370 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 429

Query: 474 KLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTMKIRKSMHRKGVQKPEPGNSYLD 504
            +      H++E+EP+   +YVLLAN+YA  G+W D  ++RK +  + ++K  PG S ++
Sbjct: 430 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK-TPGGSLIE 487

BLAST of Sed0014076 vs. ExPASy TrEMBL
Match: A0A6J1JI60 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111484809 PE=4 SV=1)

HSP 1 Score: 874.4 bits (2258), Expect = 2.4e-250
Identity = 418/516 (81.01%), Postives = 460/516 (89.15%), Query Frame = 0

Query: 1   MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
           MI LN  KSN +LSLCS++  KFPHF L  PK+I SSD +   +T+PNGSYF+KEQRF  
Sbjct: 1   MIVLNGGKSNLALSLCSRVEIKFPHFQLLLPKYIWSSDPKTPTDTIPNGSYFSKEQRFLS 60

Query: 61  LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
           LF+QCS VKDLNQ+HAR IQ GFDQNLFV+GKLIEFCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61  LFKQCSAVKDLNQLHARTIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
           FLWNTMIRGFGRI  L K FEFYKRM+ +GI  DNFTF FLLKISGQLGSIML  QLH  
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLAKQLHAN 180

Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
           ILKLG +SHVYVRNTL+HMYGRLK++++ARNLFDEMP P LVAWNT+IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
           L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVK N RGKTIAV NSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
           YAKCGAVED+REMF + S KN+VTWNTMIM LATHGD EDAL LFS MLAEK+  PD VT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLGVLCACNHGGKVEEGRRYFDLMTK+ +IQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCDIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
           PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWN+ M
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
           K+RKSM RKGVQKPEPGNS+L+INP  KLE++TVEN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMDTVEN 516

BLAST of Sed0014076 vs. ExPASy TrEMBL
Match: A0A6J1E6Y6 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111429989 PE=4 SV=1)

HSP 1 Score: 866.3 bits (2237), Expect = 6.4e-248
Identity = 416/516 (80.62%), Postives = 457/516 (88.57%), Query Frame = 0

Query: 1   MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
           MI LN  KSN + SL S++  KFPHF L  PKFI SSD++   + +PNG YF+KEQRF  
Sbjct: 1   MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60

Query: 61  LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
           LF+QCS VKDLNQ+HAR+IQ GFDQNLFV+GKLIEFCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61  LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
           FLWNTMIRGFGRI  L K FEFYKRM+ +GI  DNFTF FLLKI GQLGSIMLG QLHV 
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180

Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
           ILKLG +SHVYVRNTL+HMYG LK++++ARNLFDEMP P LVAWNT+IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGGLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
           L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVK N  GKTIAV NSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDSGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
           YAKCGAVED+REMF + S KN+VTWNTMIM LATHGD EDAL LFS MLAEK+  PD VT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360

Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLGVLCACNHGGKVEEGRRYFDLMTK+ NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
           PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWN+ M
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
           K+RKSM RKGVQKPEPGNS+L+INP  KLE+ETVEN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVEN 516

BLAST of Sed0014076 vs. ExPASy TrEMBL
Match: A0A6J1C0S9 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111007228 PE=4 SV=1)

HSP 1 Score: 865.9 bits (2236), Expect = 8.4e-248
Identity = 416/519 (80.15%), Postives = 460/519 (88.63%), Query Frame = 0

Query: 1   MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFI---RSSDQEPAINTVPNGSYFAKEQR 60
           MI + R KSN ++SLCSQ+  KFPHF L FPKFI    SSD E   +  PNG  FAKE+R
Sbjct: 1   MIVIARRKSNFAVSLCSQIRIKFPHFPLLFPKFIFSFFSSDSEVTTDARPNGRDFAKEKR 60

Query: 61  FQFLFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIEN 120
              LF+QCSTVKDLNQIHAR++Q GFDQNLFVI KLIEFCAVSDHGDMNYAVL F+RIEN
Sbjct: 61  LLSLFKQCSTVKDLNQIHARIVQTGFDQNLFVIAKLIEFCAVSDHGDMNYAVLAFNRIEN 120

Query: 121 PDGFLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQL 180
           PDGFLWNTMIRGFGRI +LQ+ FEFYKRM+ +GI  DNFTF FLLKISGQ+GS++LG QL
Sbjct: 121 PDGFLWNTMIRGFGRISKLQEAFEFYKRMLEKGISADNFTFSFLLKISGQMGSLILGKQL 180

Query: 181 HVCILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMY 240
           HV ILKLG ESHVYVRNTL+HMYG LK+I+ ARNLF EMP PDLVAWNT+IDC+VSCGMY
Sbjct: 181 HVNILKLGLESHVYVRNTLIHMYGMLKDIKTARNLFVEMPKPDLVAWNTVIDCHVSCGMY 240

Query: 241 NEALGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSL 300
            EALGLF ++ QSG+EPDEATLVVT+S CSALGALD GRWVHSHVK N RGKT+AV NSL
Sbjct: 241 EEALGLFFRMFQSGIEPDEATLVVTVSACSALGALDSGRWVHSHVKHNDRGKTVAVFNSL 300

Query: 301 IDMYAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPD 360
           IDMYAKCGAVED+ ++F +M  KN VTWNTMIMALATHGDAEDAL LFSKML EK+E PD
Sbjct: 301 IDMYAKCGAVEDALDIFNTMGSKNRVTWNTMIMALATHGDAEDALTLFSKMLTEKLENPD 360

Query: 361 DVTFLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLI 420
           DVTFLGVLCACNHGG+VEEGRRYFDLMTK+FN+QPTLKHYGSMVD+LGRAGFVEEAYQLI
Sbjct: 361 DVTFLGVLCACNHGGEVEEGRRYFDLMTKHFNVQPTLKHYGSMVDMLGRAGFVEEAYQLI 420

Query: 421 KSMPMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWN 480
           +SMPM+CNA+IWRTLLAACR+HGNVKLGERVRSHVLEIEPDHSSDYVLLANMYA+SGQWN
Sbjct: 421 RSMPMECNAVIWRTLLAACRLHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYATSGQWN 480

Query: 481 DTMKIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
           + MKIRKSM RKGVQKPEPGNSYL+INP  KLE+ETVEN
Sbjct: 481 EMMKIRKSMQRKGVQKPEPGNSYLEINPHRKLEMETVEN 519

BLAST of Sed0014076 vs. ExPASy TrEMBL
Match: A0A5A7UQ05 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002560 PE=4 SV=1)

HSP 1 Score: 841.6 bits (2173), Expect = 1.7e-240
Identity = 404/505 (80.00%), Postives = 444/505 (87.92%), Query Frame = 0

Query: 1   MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
           MI +N  K N +LSLCS    KF  F L  P+FI +S  + A +T+PNG YFAKEQ   F
Sbjct: 1   MILINGRKLNLALSLCSHGKIKFSKFQLVVPRFIWNSGPKTATDTIPNGGYFAKEQNLMF 60

Query: 61  LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
           LF+QCST+K LNQ+HAR+I+LGFDQNLFVIGKLI+FCAVSDHGDMNYAV VFDRIENPDG
Sbjct: 61  LFKQCSTLKHLNQLHARIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVDVFDRIENPDG 120

Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
           FLWNTMIRGFGRI +L   FEFYKRM+ +GI  DNFTF FLLKI+GQLGSIMLG QLHV 
Sbjct: 121 FLWNTMIRGFGRIRKLLMAFEFYKRMLEKGIEADNFTFSFLLKITGQLGSIMLGKQLHVN 180

Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
           ILKLG +SHVYVRNTL+HMYGRLK++ IARNLFDE+P  DLVAWN +IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
           L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRW+HSHV  N RGKT AV NSLIDM
Sbjct: 241 LDLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWIHSHVNSNDRGKTTAVFNSLIDM 300

Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
           YAKCGAV+ +REMF +MS KNVVTWNTMIM LATHGDAEDAL LFS ML EKVE PD VT
Sbjct: 301 YAKCGAVDYAREMFNAMSGKNVVTWNTMIMGLATHGDAEDALTLFSNMLTEKVETPDAVT 360

Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FL VLCACNHGGKVEEGRRYFDLMTK+FNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM
Sbjct: 361 FLAVLCACNHGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
           PM+CNA+IWRTLLAAC+MHGNVKLGERV SHVLEIEPDHSSDYVLLANMYASSGQWN+ +
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVKLGERVSSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KIRKSMHRKGVQKPEPGNSYLDINP 505
           K RKSM +KGV+KPEPGNSYL+INP
Sbjct: 481 KTRKSMQQKGVEKPEPGNSYLEINP 505

BLAST of Sed0014076 vs. ExPASy TrEMBL
Match: A0A1S3BWU9 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494002 PE=4 SV=1)

HSP 1 Score: 841.6 bits (2173), Expect = 1.7e-240
Identity = 404/505 (80.00%), Postives = 444/505 (87.92%), Query Frame = 0

Query: 1   MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
           MI +N  K N +LSLCS    KF  F L  P+FI +S  + A +T+PNG YFAKEQ   F
Sbjct: 1   MILINGRKLNLALSLCSHGKIKFSKFQLVVPRFIWNSGPKTATDTIPNGGYFAKEQNLMF 60

Query: 61  LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
           LF+QCST+K LNQ+HAR+I+LGFDQNLFVIGKLI+FCAVSDHGDMNYAV VFDRIENPDG
Sbjct: 61  LFKQCSTLKHLNQLHARIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVDVFDRIENPDG 120

Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
           FLWNTMIRGFGRI +L   FEFYKRM+ +GI  DNFTF FLLKI+GQLGSIMLG QLHV 
Sbjct: 121 FLWNTMIRGFGRIRKLLMAFEFYKRMLEKGIEADNFTFSFLLKITGQLGSIMLGKQLHVN 180

Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
           ILKLG +SHVYVRNTL+HMYGRLK++ IARNLFDE+P  DLVAWN +IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
           L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRW+HSHV  N RGKT AV NSLIDM
Sbjct: 241 LDLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWIHSHVNSNDRGKTTAVFNSLIDM 300

Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
           YAKCGAV+ +REMF +MS KNVVTWNTMIM LATHGDAEDAL LFS ML EKVE PD VT
Sbjct: 301 YAKCGAVDYAREMFNAMSGKNVVTWNTMIMGLATHGDAEDALTLFSNMLTEKVETPDAVT 360

Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FL VLCACNHGGKVEEGRRYFDLMTK+FNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM
Sbjct: 361 FLAVLCACNHGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
           PM+CNA+IWRTLLAAC+MHGNVKLGERV SHVLEIEPDHSSDYVLLANMYASSGQWN+ +
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVKLGERVSSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KIRKSMHRKGVQKPEPGNSYLDINP 505
           K RKSM +KGV+KPEPGNSYL+INP
Sbjct: 481 KTRKSMQQKGVEKPEPGNSYLEINP 505

BLAST of Sed0014076 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 370.2 bits (949), Expect = 2.8e-102
Identity = 183/442 (41.40%), Postives = 283/442 (64.03%), Query Frame = 0

Query: 65  STVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVS--DHGDMNYAVLVFDRIENP-DGFL 124
           S++  L QIHA  I+ G   +   +GK + F  VS      M+YA  VF +IE P + F+
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 125 WNTMIRGFGRICELQKGFEFYKRM-VNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVCI 184
           WNT+IRG+  I      F  Y+ M V+  +  D  T+ FL+K    +  + LG  +H  +
Sbjct: 88  WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147

Query: 185 LKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEAL 244
           ++ GF S +YV+N+L+H+Y    ++  A  +FD+MP  DLVAWN++I+ +   G   EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207

Query: 245 GLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDMY 304
            L+ ++   G++PD  T+V  +S C+ +GAL  G+ VH ++ + G  + +   N L+D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267

Query: 305 AKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVTF 364
           A+CG VE+++ +F  M DKN V+W ++I+ LA +G  ++A+ LF  M + +  +P ++TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327

Query: 365 LGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMP 424
           +G+L AC+H G V+EG  YF  M + + I+P ++H+G MVD+L RAG V++AY+ IKSMP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387

Query: 425 MDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTMK 484
           M  N +IWRTLL AC +HG+  L E  R  +L++EP+HS DYVLL+NMYAS  +W+D  K
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447

Query: 485 IRKSMHRKGVQKPEPGNSYLDI 503
           IRK M R GV+K  PG+S +++
Sbjct: 448 IRKQMLRDGVKK-VPGHSLVEV 468

BLAST of Sed0014076 vs. TAIR 10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 357.1 bits (915), Expect = 2.4e-98
Identity = 185/466 (39.70%), Postives = 281/466 (60.30%), Query Frame = 0

Query: 55  QRFQFLFRQCSTVKDLNQIHARVIQLGFDQ---NLFVIGKLIEFCAVSDHGDMNYAVLVF 114
           QR   L   CS +  L Q+HA  ++  + +    LF+ GK+++    S   D+NYA  VF
Sbjct: 49  QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 108

Query: 115 DRIENPDGFLWNTMIRGFGR-ICELQKGFEFYKRMVNRGIRG-DNFTFCFLLKISGQLGS 174
           D IEN   F+WNT+IR     +   ++ F  Y++M+ RG    D  TF F+LK    +  
Sbjct: 109 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 168

Query: 175 IMLGNQLHVCILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDC 234
              G Q+H  I+K GF   VYV N L+H+YG    + +AR +FDEMP   LV+WN++ID 
Sbjct: 169 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 228

Query: 235 YVSCGMYNEALGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRN---GR 294
            V  G Y+ AL LF + +Q   EPD  T+   +S C+ LG+L  G W H+ + R      
Sbjct: 229 LVRFGEYDSALQLFRE-MQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 288

Query: 295 GKTIAVCNSLIDMYAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSK 354
              + V NSLI+MY KCG++  + ++F  M  +++ +WN MI+  ATHG AE+A+  F +
Sbjct: 289 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 348

Query: 355 MLAEKVEV-PDDVTFLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGR 414
           M+ ++  V P+ VTF+G+L ACNH G V +GR+YFD+M + + I+P L+HYG +VD++ R
Sbjct: 349 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 408

Query: 415 AGFVEEAYQLIKSMPMDCNAIIWRTLL-AACRMHGNVKLGERVRSHVLEIEPDHSSD--- 474
           AG++ EA  ++ SMPM  +A+IWR+LL A C+   +V+L E +  +++  + D+ S    
Sbjct: 409 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 468

Query: 475 ----YVLLANMYASSGQWNDTMKIRKSMHRKGVQKPEPGNSYLDIN 504
               YVLL+ +YAS+ +WND   +RK M   G++K EPG S ++IN
Sbjct: 469 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK-EPGCSSIEIN 510

BLAST of Sed0014076 vs. TAIR 10
Match: AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 356.3 bits (913), Expect = 4.1e-98
Identity = 177/446 (39.69%), Postives = 276/446 (61.88%), Query Frame = 0

Query: 60  LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVS-DHGDMNYAVLVFDRIENPD 119
           L  +C+++++L QI A  I+   +   FV  KLI FC  S     M+YA  +F+ +  PD
Sbjct: 35  LISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEAMSEPD 94

Query: 120 GFLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHV 179
             ++N+M RG+ R     + F  +  ++  GI  DN+TF  LLK      ++  G QLH 
Sbjct: 95  IVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHC 154

Query: 180 CILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNE 239
             +KLG + +VYV  TL++MY   +++  AR +FD +  P +V +N +I  Y      NE
Sbjct: 155 LSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNE 214

Query: 240 ALGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLID 299
           AL LF ++    ++P+E TL+  +S C+ LG+LD G+W+H + K++   K + V  +LID
Sbjct: 215 ALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALID 274

Query: 300 MYAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDV 359
           M+AKCG+++D+  +F  M  K+   W+ MI+A A HG AE ++++F +M +E V+ PD++
Sbjct: 275 MFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ-PDEI 334

Query: 360 TFLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKS 419
           TFLG+L AC+H G+VEEGR+YF  M   F I P++KHYGSMVD+L RAG +E+AY+ I  
Sbjct: 335 TFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDK 394

Query: 420 MPMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDT 479
           +P+    ++WR LLAAC  H N+ L E+V   + E++  H  DYV+L+N+YA + +W   
Sbjct: 395 LPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYV 454

Query: 480 MKIRKSM-HRKGVQKPEPGNSYLDIN 504
             +RK M  RK V+   PG S +++N
Sbjct: 455 DSLRKVMKDRKAVK--VPGCSSIEVN 476

BLAST of Sed0014076 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 346.7 bits (888), Expect = 3.3e-95
Identity = 179/481 (37.21%), Postives = 282/481 (58.63%), Query Frame = 0

Query: 57  FQFLFRQCS---TVKDLNQIHARVIQLGFDQNLFVIGKLIEFCA-------------VSD 116
           F F+ + C+     K+  QIH  V++LG D +L+V   LI                  S 
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196

Query: 117 HGD-MNYAVLV---------------FDRIENPDGFLWNTMIRGFGRICELQKGFEFYKR 176
           H D ++Y  L+               FD I   D   WN MI G+      ++  E +K 
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256

Query: 177 MVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVCILKLGFESHVYVRNTLVHMYGRLKE 236
           M+   +R D  T   ++    Q GSI LG Q+H+ I   GF S++ + N L+ +Y +  E
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316

Query: 237 IRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEALGLFVQLLQSGVEPDEATLVVTISG 296
           +  A  LF+ +P  D+++WNTLI  Y    +Y EAL LF ++L+SG  P++ T++  +  
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376

Query: 297 CSALGALDFGRWVHSHVKRNGRGKTIA--VCNSLIDMYAKCGAVEDSREMFYSMSDKNVV 356
           C+ LGA+D GRW+H ++ +  +G T A  +  SLIDMYAKCG +E + ++F S+  K++ 
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436

Query: 357 TWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVTFLGVLCACNHGGKVEEGRRYFDL 416
           +WN MI   A HG A+ +  LFS+M    ++ PDD+TF+G+L AC+H G ++ GR  F  
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQ-PDDITFVGLLSACSHSGMLDLGRHIFRT 496

Query: 417 MTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMDCNAIIWRTLLAACRMHGNVK 476
           MT+ + + P L+HYG M+D+LG +G  +EA ++I  M M+ + +IW +LL AC+MHGNV+
Sbjct: 497 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVE 556

Query: 477 LGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTMKIRKSMHRKGVQKPEPGNSYLDI 504
           LGE    ++++IEP++   YVLL+N+YAS+G+WN+  K R  ++ KG++K  PG S ++I
Sbjct: 557 LGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK-VPGCSSIEI 615

BLAST of Sed0014076 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 342.8 bits (878), Expect = 4.7e-94
Identity = 168/482 (34.85%), Postives = 280/482 (58.09%), Query Frame = 0

Query: 54  EQRFQFLFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDR 113
           E  F    ++  +  +  +I+A +I  G  Q+ F++ K+++FC   +  DM+YA  +F++
Sbjct: 10  ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIE--DMDYATRLFNQ 69

Query: 114 IENPDGFLWNTMIRGFGRICELQKGFEFYKRMVNRGIR-GDNFTFCFLLKISGQLGSIML 173
           + NP+ FL+N++IR +            YK+++ +     D FTF F+ K    LGS  L
Sbjct: 70  VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 129

Query: 174 GNQLHVCILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTL------ 233
           G Q+H  + K G   HV   N L+ MY +  ++  A  +FDEM   D+++WN+L      
Sbjct: 130 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 189

Query: 234 -------------------------IDCYVSCGMYNEALGLFVQLLQSGVEPDEATLVVT 293
                                    I  Y   G Y EA+  F ++  +G+EPDE +L+  
Sbjct: 190 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 249

Query: 294 ISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDMYAKCGAVEDSREMFYSMSDKNV 353
           +  C+ LG+L+ G+W+H + +R G  K   VCN+LI+MY+KCG +  + ++F  M  K+V
Sbjct: 250 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 309

Query: 354 VTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVTFLGVLCACNHGGKVEEGRRYFD 413
           ++W+TMI   A HG+A  A+  F++M   KV+ P+ +TFLG+L AC+H G  +EG RYFD
Sbjct: 310 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVK-PNGITFLGLLSACSHVGMWQEGLRYFD 369

Query: 414 LMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMDCNAIIWRTLLAACRMHGNV 473
           +M + + I+P ++HYG ++D+L RAG +E A ++ K+MPM  ++ IW +LL++CR  GN+
Sbjct: 370 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 429

Query: 474 KLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTMKIRKSMHRKGVQKPEPGNSYLD 504
            +      H++E+EP+   +YVLLAN+YA  G+W D  ++RK +  + ++K  PG S ++
Sbjct: 430 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK-TPGGSLIE 487

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022987183.14.9e-25081.01pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
XP_023516362.11.8e-24980.81pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... [more]
KAG6589516.14.1e-24981.01Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partia... [more]
KAG7023204.14.1e-24981.01Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partia... [more]
XP_038880037.11.6e-24882.54pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A8MQA33.9e-10141.40Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
Q0WQW53.4e-9739.70Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
Q8LK935.8e-9739.69Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... [more]
Q9LN014.6e-9437.21Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Q9SIL56.7e-9334.85Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1JI602.4e-25081.01pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A0A6J1E6Y66.4e-24880.62pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A0A6J1C0S98.4e-24880.15pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like OS=Mom... [more]
A0A5A7UQ051.7e-24080.00Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BWU91.7e-24080.00pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
Match NameE-valueIdentityDescription
AT4G21065.12.8e-10241.40Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G59720.12.4e-9839.70Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G02980.14.1e-9839.69Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G08070.13.3e-9537.21Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G20540.14.7e-9434.85mitochondrial editing factor 21 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 173..272
e-value: 4.2E-20
score: 74.3
coord: 5..172
e-value: 5.4E-13
score: 51.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 376..502
e-value: 1.2E-14
score: 56.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 273..370
e-value: 1.2E-20
score: 75.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 217..477
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 319..367
e-value: 1.1E-9
score: 38.3
coord: 117..162
e-value: 6.0E-8
score: 32.8
coord: 218..265
e-value: 8.6E-11
score: 41.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 322..356
e-value: 1.1E-4
score: 20.1
coord: 221..255
e-value: 2.2E-8
score: 31.8
coord: 121..153
e-value: 6.3E-7
score: 27.2
coord: 292..321
e-value: 0.0012
score: 16.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 462..490
e-value: 1.2
score: 9.5
coord: 193..216
e-value: 0.12
score: 12.7
coord: 396..420
e-value: 0.0024
score: 18.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 320..354
score: 10.818861
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 118..152
score: 10.292718
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 289..319
score: 8.549871
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 219..253
score: 12.495939
NoneNo IPR availablePANTHERPTHR47926:SF177PPR CONTAINING PLANT-LIKE PROTEINcoord: 46..504
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 46..504

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0014076.1Sed0014076.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding