Homology
BLAST of Sed0014076 vs. NCBI nr
Match:
XP_022987183.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita maxima] >XP_022987184.1 pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 874.4 bits (2258), Expect = 4.9e-250
Identity = 418/516 (81.01%), Postives = 460/516 (89.15%), Query Frame = 0
Query: 1 MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
MI LN KSN +LSLCS++ KFPHF L PK+I SSD + +T+PNGSYF+KEQRF
Sbjct: 1 MIVLNGGKSNLALSLCSRVEIKFPHFQLLLPKYIWSSDPKTPTDTIPNGSYFSKEQRFLS 60
Query: 61 LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
LF+QCS VKDLNQ+HAR IQ GFDQNLFV+GKLIEFCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61 LFKQCSAVKDLNQLHARTIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
FLWNTMIRGFGRI L K FEFYKRM+ +GI DNFTF FLLKISGQLGSIML QLH
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLAKQLHAN 180
Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
ILKLG +SHVYVRNTL+HMYGRLK++++ARNLFDEMP P LVAWNT+IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVK N RGKTIAV NSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300
Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
YAKCGAVED+REMF + S KN+VTWNTMIM LATHGD EDAL LFS MLAEK+ PD VT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
FLGVLCACNHGGKVEEGRRYFDLMTK+ +IQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCDIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWN+ M
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
Query: 481 KIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
K+RKSM RKGVQKPEPGNS+L+INP KLE++TVEN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMDTVEN 516
BLAST of Sed0014076 vs. NCBI nr
Match:
XP_023516362.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 872.5 bits (2253), Expect = 1.8e-249
Identity = 417/516 (80.81%), Postives = 459/516 (88.95%), Query Frame = 0
Query: 1 MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
MI LN KSN + SLCS++ KFPHF L PKFI SSD++ +PNGSYF+KEQRF
Sbjct: 1 MIVLNGGKSNLARSLCSRVEIKFPHFQLLLPKFIWSSDRKTPTEAIPNGSYFSKEQRFLS 60
Query: 61 LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
LF+QCS VKDLNQ+HAR I+ GFDQNLFV+GKLIEFCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61 LFKQCSAVKDLNQVHARTIRSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
FLWNTMIRGFGRI L K FEFYKRM+ +GI DNFTF FLLKISGQLGSIMLG QLHV
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLGKQLHVN 180
Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
ILKLG +SHVYVRNTL+HMYG LK++++ARNLFDEMP P LVAWNT+IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGSLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVK N RGKTIAV NSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300
Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
YAKCGAVE++REMF + S KN+VTWNTMIM LATHGD EDAL LFS MLAEK+ PD VT
Sbjct: 301 YAKCGAVEEAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
FLGVLCACNHGGKVEEGRRYFDLMTK+ NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWN+ M
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
Query: 481 KIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
K+RKSM RKGVQKPEPGNS+L+INP KLE++TVEN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMDTVEN 516
BLAST of Sed0014076 vs. NCBI nr
Match:
KAG6589516.1 (Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 871.3 bits (2250), Expect = 4.1e-249
Identity = 418/516 (81.01%), Postives = 459/516 (88.95%), Query Frame = 0
Query: 1 MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
MI LN KSN + SL S++ KFPHF L PKFI SSD++ + +PNG YF+KEQRF
Sbjct: 1 MIVLNGGKSNLARSLFSRVQIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
Query: 61 LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
LF+QCS VKDLNQ+HAR+IQ GFDQNLFV+GKLIEFCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
FLWNTMIRGFGRI L K FEFYKRM+ +GI DNFTF FLLKI GQLGSIMLG QLHV
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
ILKLG +SHVYVRNTL+HMYGRLK++++ARNLFDEMP P LVAWNT+IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVK N RGKTIAV NSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300
Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
YAKCGAVED+REMF + S KN+VTWNTMIM LATHGD EDAL LFS MLAEK+ PD VT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
FLGVLCACNHGGKVEEGRRYFDLMTK+ NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWN+ M
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
Query: 481 KIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
K+RKSM RKGVQKPEPGNS+L+INP KLE+ETVEN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVEN 516
BLAST of Sed0014076 vs. NCBI nr
Match:
KAG7023204.1 (Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 871.3 bits (2250), Expect = 4.1e-249
Identity = 418/516 (81.01%), Postives = 459/516 (88.95%), Query Frame = 0
Query: 1 MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
MI LN KSN + SL S++ KFPHF L PKFI SSD++ + +PNG YF+KEQRF
Sbjct: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
Query: 61 LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
LF+QCS VKDLNQ+HAR+IQ GFDQNLFV+GKLIEFCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
FLWNTMIRGFGRI L K FEFYKRM+ +GI DNFTF FLLKI GQLGSIMLG QLHV
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
ILKLG +SHVYVRNTL+HMYGRLK++++ARNLFDEMP P LVAWNT+IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVK N RGKTIAV NSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDRGKTIAVFNSLIDM 300
Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
YAKCGAVED+REMF + S KN+VTWNTMIM LATHGD EDAL LFS MLAEK+ PD VT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
FLGVLCACNHGGKVEEGRRYFDLMTK+ NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWN+ M
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
Query: 481 KIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
K+RKSM RKGVQKPEPGNS+L+INP KLE+ETVEN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVEN 516
BLAST of Sed0014076 vs. NCBI nr
Match:
XP_038880037.1 (pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida])
HSP 1 Score: 869.4 bits (2245), Expect = 1.6e-248
Identity = 416/504 (82.54%), Postives = 459/504 (91.07%), Query Frame = 0
Query: 1 MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
MI + K+N +LSL SQ+ KFPHF L PKF+ SSD++ A +T+PNGSYFAKEQRF
Sbjct: 1 MIVITSRKANLALSLFSQVKFKFPHFQLLVPKFVWSSDRKTATDTIPNGSYFAKEQRFLS 60
Query: 61 LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
L +QCSTVKDLNQ+HAR+IQLGFDQNLFVIGKLIEFCAVS++GDMNYAV+VF+ IENPDG
Sbjct: 61 LSKQCSTVKDLNQLHARIIQLGFDQNLFVIGKLIEFCAVSNYGDMNYAVVVFNGIENPDG 120
Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
FLWNTMIRGFGRI +L K FEFYKRM+ +GI DNFTF FLLKISGQ GSIMLG QLHV
Sbjct: 121 FLWNTMIRGFGRISKLLKAFEFYKRMLEKGIAADNFTFSFLLKISGQSGSIMLGKQLHVN 180
Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
ILK+G +SHVYVRNTL+HMYGRLK+++IARNLFDEMP PDLVAWN +IDC+VSCGMY+EA
Sbjct: 181 ILKVGLDSHVYVRNTLIHMYGRLKDVKIARNLFDEMPKPDLVAWNAVIDCHVSCGMYSEA 240
Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
LGLF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVKRN +GKTIAV NSLIDM
Sbjct: 241 LGLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKRNDKGKTIAVLNSLIDM 300
Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
YAKCGAVED+REMF +MSDKNVVTWNTMIM LATHGDAEDAL LFS MLA+KVE PD VT
Sbjct: 301 YAKCGAVEDAREMFNAMSDKNVVTWNTMIMGLATHGDAEDALTLFSNMLAKKVETPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
FLGVLCACNHGGKVEEGR YF LMTK+FNIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGREYFHLMTKHFNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWN+ +
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
Query: 481 KIRKSMHRKGVQKPEPGNSYLDIN 504
K RKSM RKGVQKPEPGNSYL+IN
Sbjct: 481 KTRKSMQRKGVQKPEPGNSYLEIN 504
BLAST of Sed0014076 vs. ExPASy Swiss-Prot
Match:
A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 370.2 bits (949), Expect = 3.9e-101
Identity = 183/442 (41.40%), Postives = 283/442 (64.03%), Query Frame = 0
Query: 65 STVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVS--DHGDMNYAVLVFDRIENP-DGFL 124
S++ L QIHA I+ G + +GK + F VS M+YA VF +IE P + F+
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 125 WNTMIRGFGRICELQKGFEFYKRM-VNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVCI 184
WNT+IRG+ I F Y+ M V+ + D T+ FL+K + + LG +H +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 185 LKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEAL 244
++ GF S +YV+N+L+H+Y ++ A +FD+MP DLVAWN++I+ + G EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 245 GLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDMY 304
L+ ++ G++PD T+V +S C+ +GAL G+ VH ++ + G + + N L+D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 305 AKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVTF 364
A+CG VE+++ +F M DKN V+W ++I+ LA +G ++A+ LF M + + +P ++TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 365 LGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMP 424
+G+L AC+H G V+EG YF M + + I+P ++H+G MVD+L RAG V++AY+ IKSMP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 425 MDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTMK 484
M N +IWRTLL AC +HG+ L E R +L++EP+HS DYVLL+NMYAS +W+D K
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 485 IRKSMHRKGVQKPEPGNSYLDI 503
IRK M R GV+K PG+S +++
Sbjct: 448 IRKQMLRDGVKK-VPGHSLVEV 468
BLAST of Sed0014076 vs. ExPASy Swiss-Prot
Match:
Q0WQW5 (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)
HSP 1 Score: 357.1 bits (915), Expect = 3.4e-97
Identity = 185/466 (39.70%), Postives = 281/466 (60.30%), Query Frame = 0
Query: 55 QRFQFLFRQCSTVKDLNQIHARVIQLGFDQ---NLFVIGKLIEFCAVSDHGDMNYAVLVF 114
QR L CS + L Q+HA ++ + + LF+ GK+++ S D+NYA VF
Sbjct: 49 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 108
Query: 115 DRIENPDGFLWNTMIRGFGR-ICELQKGFEFYKRMVNRGIRG-DNFTFCFLLKISGQLGS 174
D IEN F+WNT+IR + ++ F Y++M+ RG D TF F+LK +
Sbjct: 109 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 168
Query: 175 IMLGNQLHVCILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDC 234
G Q+H I+K GF VYV N L+H+YG + +AR +FDEMP LV+WN++ID
Sbjct: 169 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 228
Query: 235 YVSCGMYNEALGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRN---GR 294
V G Y+ AL LF + +Q EPD T+ +S C+ LG+L G W H+ + R
Sbjct: 229 LVRFGEYDSALQLFRE-MQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 288
Query: 295 GKTIAVCNSLIDMYAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSK 354
+ V NSLI+MY KCG++ + ++F M +++ +WN MI+ ATHG AE+A+ F +
Sbjct: 289 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 348
Query: 355 MLAEKVEV-PDDVTFLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGR 414
M+ ++ V P+ VTF+G+L ACNH G V +GR+YFD+M + + I+P L+HYG +VD++ R
Sbjct: 349 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 408
Query: 415 AGFVEEAYQLIKSMPMDCNAIIWRTLL-AACRMHGNVKLGERVRSHVLEIEPDHSSD--- 474
AG++ EA ++ SMPM +A+IWR+LL A C+ +V+L E + +++ + D+ S
Sbjct: 409 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 468
Query: 475 ----YVLLANMYASSGQWNDTMKIRKSMHRKGVQKPEPGNSYLDIN 504
YVLL+ +YAS+ +WND +RK M G++K EPG S ++IN
Sbjct: 469 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK-EPGCSSIEIN 510
BLAST of Sed0014076 vs. ExPASy Swiss-Prot
Match:
Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)
HSP 1 Score: 356.3 bits (913), Expect = 5.8e-97
Identity = 177/446 (39.69%), Postives = 276/446 (61.88%), Query Frame = 0
Query: 60 LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVS-DHGDMNYAVLVFDRIENPD 119
L +C+++++L QI A I+ + FV KLI FC S M+YA +F+ + PD
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEAMSEPD 94
Query: 120 GFLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHV 179
++N+M RG+ R + F + ++ GI DN+TF LLK ++ G QLH
Sbjct: 95 IVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHC 154
Query: 180 CILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNE 239
+KLG + +VYV TL++MY +++ AR +FD + P +V +N +I Y NE
Sbjct: 155 LSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNE 214
Query: 240 ALGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLID 299
AL LF ++ ++P+E TL+ +S C+ LG+LD G+W+H + K++ K + V +LID
Sbjct: 215 ALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALID 274
Query: 300 MYAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDV 359
M+AKCG+++D+ +F M K+ W+ MI+A A HG AE ++++F +M +E V+ PD++
Sbjct: 275 MFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ-PDEI 334
Query: 360 TFLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKS 419
TFLG+L AC+H G+VEEGR+YF M F I P++KHYGSMVD+L RAG +E+AY+ I
Sbjct: 335 TFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDK 394
Query: 420 MPMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDT 479
+P+ ++WR LLAAC H N+ L E+V + E++ H DYV+L+N+YA + +W
Sbjct: 395 LPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYV 454
Query: 480 MKIRKSM-HRKGVQKPEPGNSYLDIN 504
+RK M RK V+ PG S +++N
Sbjct: 455 DSLRKVMKDRKAVK--VPGCSSIEVN 476
BLAST of Sed0014076 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 346.7 bits (888), Expect = 4.6e-94
Identity = 179/481 (37.21%), Postives = 282/481 (58.63%), Query Frame = 0
Query: 57 FQFLFRQCS---TVKDLNQIHARVIQLGFDQNLFVIGKLIEFCA-------------VSD 116
F F+ + C+ K+ QIH V++LG D +L+V LI S
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196
Query: 117 HGD-MNYAVLV---------------FDRIENPDGFLWNTMIRGFGRICELQKGFEFYKR 176
H D ++Y L+ FD I D WN MI G+ ++ E +K
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 177 MVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVCILKLGFESHVYVRNTLVHMYGRLKE 236
M+ +R D T ++ Q GSI LG Q+H+ I GF S++ + N L+ +Y + E
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 237 IRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEALGLFVQLLQSGVEPDEATLVVTISG 296
+ A LF+ +P D+++WNTLI Y +Y EAL LF ++L+SG P++ T++ +
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 297 CSALGALDFGRWVHSHVKRNGRGKTIA--VCNSLIDMYAKCGAVEDSREMFYSMSDKNVV 356
C+ LGA+D GRW+H ++ + +G T A + SLIDMYAKCG +E + ++F S+ K++
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 357 TWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVTFLGVLCACNHGGKVEEGRRYFDL 416
+WN MI A HG A+ + LFS+M ++ PDD+TF+G+L AC+H G ++ GR F
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQ-PDDITFVGLLSACSHSGMLDLGRHIFRT 496
Query: 417 MTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMDCNAIIWRTLLAACRMHGNVK 476
MT+ + + P L+HYG M+D+LG +G +EA ++I M M+ + +IW +LL AC+MHGNV+
Sbjct: 497 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVE 556
Query: 477 LGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTMKIRKSMHRKGVQKPEPGNSYLDI 504
LGE ++++IEP++ YVLL+N+YAS+G+WN+ K R ++ KG++K PG S ++I
Sbjct: 557 LGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK-VPGCSSIEI 615
BLAST of Sed0014076 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 342.8 bits (878), Expect = 6.7e-93
Identity = 168/482 (34.85%), Postives = 280/482 (58.09%), Query Frame = 0
Query: 54 EQRFQFLFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDR 113
E F ++ + + +I+A +I G Q+ F++ K+++FC + DM+YA +F++
Sbjct: 10 ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIE--DMDYATRLFNQ 69
Query: 114 IENPDGFLWNTMIRGFGRICELQKGFEFYKRMVNRGIR-GDNFTFCFLLKISGQLGSIML 173
+ NP+ FL+N++IR + YK+++ + D FTF F+ K LGS L
Sbjct: 70 VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 129
Query: 174 GNQLHVCILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTL------ 233
G Q+H + K G HV N L+ MY + ++ A +FDEM D+++WN+L
Sbjct: 130 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 189
Query: 234 -------------------------IDCYVSCGMYNEALGLFVQLLQSGVEPDEATLVVT 293
I Y G Y EA+ F ++ +G+EPDE +L+
Sbjct: 190 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 249
Query: 294 ISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDMYAKCGAVEDSREMFYSMSDKNV 353
+ C+ LG+L+ G+W+H + +R G K VCN+LI+MY+KCG + + ++F M K+V
Sbjct: 250 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 309
Query: 354 VTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVTFLGVLCACNHGGKVEEGRRYFD 413
++W+TMI A HG+A A+ F++M KV+ P+ +TFLG+L AC+H G +EG RYFD
Sbjct: 310 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVK-PNGITFLGLLSACSHVGMWQEGLRYFD 369
Query: 414 LMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMDCNAIIWRTLLAACRMHGNV 473
+M + + I+P ++HYG ++D+L RAG +E A ++ K+MPM ++ IW +LL++CR GN+
Sbjct: 370 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 429
Query: 474 KLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTMKIRKSMHRKGVQKPEPGNSYLD 504
+ H++E+EP+ +YVLLAN+YA G+W D ++RK + + ++K PG S ++
Sbjct: 430 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK-TPGGSLIE 487
BLAST of Sed0014076 vs. ExPASy TrEMBL
Match:
A0A6J1JI60 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111484809 PE=4 SV=1)
HSP 1 Score: 874.4 bits (2258), Expect = 2.4e-250
Identity = 418/516 (81.01%), Postives = 460/516 (89.15%), Query Frame = 0
Query: 1 MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
MI LN KSN +LSLCS++ KFPHF L PK+I SSD + +T+PNGSYF+KEQRF
Sbjct: 1 MIVLNGGKSNLALSLCSRVEIKFPHFQLLLPKYIWSSDPKTPTDTIPNGSYFSKEQRFLS 60
Query: 61 LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
LF+QCS VKDLNQ+HAR IQ GFDQNLFV+GKLIEFCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61 LFKQCSAVKDLNQLHARTIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
FLWNTMIRGFGRI L K FEFYKRM+ +GI DNFTF FLLKISGQLGSIML QLH
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGSIMLAKQLHAN 180
Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
ILKLG +SHVYVRNTL+HMYGRLK++++ARNLFDEMP P LVAWNT+IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVK N RGKTIAV NSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300
Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
YAKCGAVED+REMF + S KN+VTWNTMIM LATHGD EDAL LFS MLAEK+ PD VT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
FLGVLCACNHGGKVEEGRRYFDLMTK+ +IQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCDIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWN+ M
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
Query: 481 KIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
K+RKSM RKGVQKPEPGNS+L+INP KLE++TVEN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMDTVEN 516
BLAST of Sed0014076 vs. ExPASy TrEMBL
Match:
A0A6J1E6Y6 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111429989 PE=4 SV=1)
HSP 1 Score: 866.3 bits (2237), Expect = 6.4e-248
Identity = 416/516 (80.62%), Postives = 457/516 (88.57%), Query Frame = 0
Query: 1 MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
MI LN KSN + SL S++ KFPHF L PKFI SSD++ + +PNG YF+KEQRF
Sbjct: 1 MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60
Query: 61 LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
LF+QCS VKDLNQ+HAR+IQ GFDQNLFV+GKLIEFCAVS HGDMNYAV VF+RIENPDG
Sbjct: 61 LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120
Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
FLWNTMIRGFGRI L K FEFYKRM+ +GI DNFTF FLLKI GQLGSIMLG QLHV
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180
Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
ILKLG +SHVYVRNTL+HMYG LK++++ARNLFDEMP P LVAWNT+IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGGLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240
Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRWVHSHVK N GKTIAV NSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDSGKTIAVFNSLIDM 300
Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
YAKCGAVED+REMF + S KN+VTWNTMIM LATHGD EDAL LFS MLAEK+ PD VT
Sbjct: 301 YAKCGAVEDAREMFNATSGKNIVTWNTMIMGLATHGDVEDALTLFSNMLAEKIVTPDGVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
FLGVLCACNHGGKVEEGRRYFDLMTK+ NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420
Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
PM+CNA+IWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLAN+YASSGQWN+ M
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480
Query: 481 KIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
K+RKSM RKGVQKPEPGNS+L+INP KLE+ETVEN
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINPCRKLEMETVEN 516
BLAST of Sed0014076 vs. ExPASy TrEMBL
Match:
A0A6J1C0S9 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111007228 PE=4 SV=1)
HSP 1 Score: 865.9 bits (2236), Expect = 8.4e-248
Identity = 416/519 (80.15%), Postives = 460/519 (88.63%), Query Frame = 0
Query: 1 MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFI---RSSDQEPAINTVPNGSYFAKEQR 60
MI + R KSN ++SLCSQ+ KFPHF L FPKFI SSD E + PNG FAKE+R
Sbjct: 1 MIVIARRKSNFAVSLCSQIRIKFPHFPLLFPKFIFSFFSSDSEVTTDARPNGRDFAKEKR 60
Query: 61 FQFLFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIEN 120
LF+QCSTVKDLNQIHAR++Q GFDQNLFVI KLIEFCAVSDHGDMNYAVL F+RIEN
Sbjct: 61 LLSLFKQCSTVKDLNQIHARIVQTGFDQNLFVIAKLIEFCAVSDHGDMNYAVLAFNRIEN 120
Query: 121 PDGFLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQL 180
PDGFLWNTMIRGFGRI +LQ+ FEFYKRM+ +GI DNFTF FLLKISGQ+GS++LG QL
Sbjct: 121 PDGFLWNTMIRGFGRISKLQEAFEFYKRMLEKGISADNFTFSFLLKISGQMGSLILGKQL 180
Query: 181 HVCILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMY 240
HV ILKLG ESHVYVRNTL+HMYG LK+I+ ARNLF EMP PDLVAWNT+IDC+VSCGMY
Sbjct: 181 HVNILKLGLESHVYVRNTLIHMYGMLKDIKTARNLFVEMPKPDLVAWNTVIDCHVSCGMY 240
Query: 241 NEALGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSL 300
EALGLF ++ QSG+EPDEATLVVT+S CSALGALD GRWVHSHVK N RGKT+AV NSL
Sbjct: 241 EEALGLFFRMFQSGIEPDEATLVVTVSACSALGALDSGRWVHSHVKHNDRGKTVAVFNSL 300
Query: 301 IDMYAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPD 360
IDMYAKCGAVED+ ++F +M KN VTWNTMIMALATHGDAEDAL LFSKML EK+E PD
Sbjct: 301 IDMYAKCGAVEDALDIFNTMGSKNRVTWNTMIMALATHGDAEDALTLFSKMLTEKLENPD 360
Query: 361 DVTFLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLI 420
DVTFLGVLCACNHGG+VEEGRRYFDLMTK+FN+QPTLKHYGSMVD+LGRAGFVEEAYQLI
Sbjct: 361 DVTFLGVLCACNHGGEVEEGRRYFDLMTKHFNVQPTLKHYGSMVDMLGRAGFVEEAYQLI 420
Query: 421 KSMPMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWN 480
+SMPM+CNA+IWRTLLAACR+HGNVKLGERVRSHVLEIEPDHSSDYVLLANMYA+SGQWN
Sbjct: 421 RSMPMECNAVIWRTLLAACRLHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYATSGQWN 480
Query: 481 DTMKIRKSMHRKGVQKPEPGNSYLDINPQGKLELETVEN 516
+ MKIRKSM RKGVQKPEPGNSYL+INP KLE+ETVEN
Sbjct: 481 EMMKIRKSMQRKGVQKPEPGNSYLEINPHRKLEMETVEN 519
BLAST of Sed0014076 vs. ExPASy TrEMBL
Match:
A0A5A7UQ05 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002560 PE=4 SV=1)
HSP 1 Score: 841.6 bits (2173), Expect = 1.7e-240
Identity = 404/505 (80.00%), Postives = 444/505 (87.92%), Query Frame = 0
Query: 1 MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
MI +N K N +LSLCS KF F L P+FI +S + A +T+PNG YFAKEQ F
Sbjct: 1 MILINGRKLNLALSLCSHGKIKFSKFQLVVPRFIWNSGPKTATDTIPNGGYFAKEQNLMF 60
Query: 61 LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
LF+QCST+K LNQ+HAR+I+LGFDQNLFVIGKLI+FCAVSDHGDMNYAV VFDRIENPDG
Sbjct: 61 LFKQCSTLKHLNQLHARIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVDVFDRIENPDG 120
Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
FLWNTMIRGFGRI +L FEFYKRM+ +GI DNFTF FLLKI+GQLGSIMLG QLHV
Sbjct: 121 FLWNTMIRGFGRIRKLLMAFEFYKRMLEKGIEADNFTFSFLLKITGQLGSIMLGKQLHVN 180
Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
ILKLG +SHVYVRNTL+HMYGRLK++ IARNLFDE+P DLVAWN +IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRW+HSHV N RGKT AV NSLIDM
Sbjct: 241 LDLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWIHSHVNSNDRGKTTAVFNSLIDM 300
Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
YAKCGAV+ +REMF +MS KNVVTWNTMIM LATHGDAEDAL LFS ML EKVE PD VT
Sbjct: 301 YAKCGAVDYAREMFNAMSGKNVVTWNTMIMGLATHGDAEDALTLFSNMLTEKVETPDAVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
FL VLCACNHGGKVEEGRRYFDLMTK+FNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM
Sbjct: 361 FLAVLCACNHGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
PM+CNA+IWRTLLAAC+MHGNVKLGERV SHVLEIEPDHSSDYVLLANMYASSGQWN+ +
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVKLGERVSSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
Query: 481 KIRKSMHRKGVQKPEPGNSYLDINP 505
K RKSM +KGV+KPEPGNSYL+INP
Sbjct: 481 KTRKSMQQKGVEKPEPGNSYLEINP 505
BLAST of Sed0014076 vs. ExPASy TrEMBL
Match:
A0A1S3BWU9 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494002 PE=4 SV=1)
HSP 1 Score: 841.6 bits (2173), Expect = 1.7e-240
Identity = 404/505 (80.00%), Postives = 444/505 (87.92%), Query Frame = 0
Query: 1 MIFLNRTKSNSSLSLCSQLHRKFPHF-LHFPKFIRSSDQEPAINTVPNGSYFAKEQRFQF 60
MI +N K N +LSLCS KF F L P+FI +S + A +T+PNG YFAKEQ F
Sbjct: 1 MILINGRKLNLALSLCSHGKIKFSKFQLVVPRFIWNSGPKTATDTIPNGGYFAKEQNLMF 60
Query: 61 LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDRIENPDG 120
LF+QCST+K LNQ+HAR+I+LGFDQNLFVIGKLI+FCAVSDHGDMNYAV VFDRIENPDG
Sbjct: 61 LFKQCSTLKHLNQLHARIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVDVFDRIENPDG 120
Query: 121 FLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVC 180
FLWNTMIRGFGRI +L FEFYKRM+ +GI DNFTF FLLKI+GQLGSIMLG QLHV
Sbjct: 121 FLWNTMIRGFGRIRKLLMAFEFYKRMLEKGIEADNFTFSFLLKITGQLGSIMLGKQLHVN 180
Query: 181 ILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEA 240
ILKLG +SHVYVRNTL+HMYGRLK++ IARNLFDE+P DLVAWN +IDC+VSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEA 240
Query: 241 LGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDM 300
L LF+Q+LQSGVEPDEATLVVT+S CSALGALDFGRW+HSHV N RGKT AV NSLIDM
Sbjct: 241 LDLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWIHSHVNSNDRGKTTAVFNSLIDM 300
Query: 301 YAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVT 360
YAKCGAV+ +REMF +MS KNVVTWNTMIM LATHGDAEDAL LFS ML EKVE PD VT
Sbjct: 301 YAKCGAVDYAREMFNAMSGKNVVTWNTMIMGLATHGDAEDALTLFSNMLTEKVETPDAVT 360
Query: 361 FLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
FL VLCACNHGGKVEEGRRYFDLMTK+FNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM
Sbjct: 361 FLAVLCACNHGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
Query: 421 PMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTM 480
PM+CNA+IWRTLLAAC+MHGNVKLGERV SHVLEIEPDHSSDYVLLANMYASSGQWN+ +
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVKLGERVSSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480
Query: 481 KIRKSMHRKGVQKPEPGNSYLDINP 505
K RKSM +KGV+KPEPGNSYL+INP
Sbjct: 481 KTRKSMQQKGVEKPEPGNSYLEINP 505
BLAST of Sed0014076 vs. TAIR 10
Match:
AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 370.2 bits (949), Expect = 2.8e-102
Identity = 183/442 (41.40%), Postives = 283/442 (64.03%), Query Frame = 0
Query: 65 STVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVS--DHGDMNYAVLVFDRIENP-DGFL 124
S++ L QIHA I+ G + +GK + F VS M+YA VF +IE P + F+
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 125 WNTMIRGFGRICELQKGFEFYKRM-VNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVCI 184
WNT+IRG+ I F Y+ M V+ + D T+ FL+K + + LG +H +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 185 LKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEAL 244
++ GF S +YV+N+L+H+Y ++ A +FD+MP DLVAWN++I+ + G EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 245 GLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDMY 304
L+ ++ G++PD T+V +S C+ +GAL G+ VH ++ + G + + N L+D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 305 AKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVTF 364
A+CG VE+++ +F M DKN V+W ++I+ LA +G ++A+ LF M + + +P ++TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 365 LGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMP 424
+G+L AC+H G V+EG YF M + + I+P ++H+G MVD+L RAG V++AY+ IKSMP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 425 MDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTMK 484
M N +IWRTLL AC +HG+ L E R +L++EP+HS DYVLL+NMYAS +W+D K
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 485 IRKSMHRKGVQKPEPGNSYLDI 503
IRK M R GV+K PG+S +++
Sbjct: 448 IRKQMLRDGVKK-VPGHSLVEV 468
BLAST of Sed0014076 vs. TAIR 10
Match:
AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 357.1 bits (915), Expect = 2.4e-98
Identity = 185/466 (39.70%), Postives = 281/466 (60.30%), Query Frame = 0
Query: 55 QRFQFLFRQCSTVKDLNQIHARVIQLGFDQ---NLFVIGKLIEFCAVSDHGDMNYAVLVF 114
QR L CS + L Q+HA ++ + + LF+ GK+++ S D+NYA VF
Sbjct: 49 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 108
Query: 115 DRIENPDGFLWNTMIRGFGR-ICELQKGFEFYKRMVNRGIRG-DNFTFCFLLKISGQLGS 174
D IEN F+WNT+IR + ++ F Y++M+ RG D TF F+LK +
Sbjct: 109 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 168
Query: 175 IMLGNQLHVCILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDC 234
G Q+H I+K GF VYV N L+H+YG + +AR +FDEMP LV+WN++ID
Sbjct: 169 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 228
Query: 235 YVSCGMYNEALGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRN---GR 294
V G Y+ AL LF + +Q EPD T+ +S C+ LG+L G W H+ + R
Sbjct: 229 LVRFGEYDSALQLFRE-MQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 288
Query: 295 GKTIAVCNSLIDMYAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSK 354
+ V NSLI+MY KCG++ + ++F M +++ +WN MI+ ATHG AE+A+ F +
Sbjct: 289 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 348
Query: 355 MLAEKVEV-PDDVTFLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGR 414
M+ ++ V P+ VTF+G+L ACNH G V +GR+YFD+M + + I+P L+HYG +VD++ R
Sbjct: 349 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 408
Query: 415 AGFVEEAYQLIKSMPMDCNAIIWRTLL-AACRMHGNVKLGERVRSHVLEIEPDHSSD--- 474
AG++ EA ++ SMPM +A+IWR+LL A C+ +V+L E + +++ + D+ S
Sbjct: 409 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 468
Query: 475 ----YVLLANMYASSGQWNDTMKIRKSMHRKGVQKPEPGNSYLDIN 504
YVLL+ +YAS+ +WND +RK M G++K EPG S ++IN
Sbjct: 469 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK-EPGCSSIEIN 510
BLAST of Sed0014076 vs. TAIR 10
Match:
AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 356.3 bits (913), Expect = 4.1e-98
Identity = 177/446 (39.69%), Postives = 276/446 (61.88%), Query Frame = 0
Query: 60 LFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVS-DHGDMNYAVLVFDRIENPD 119
L +C+++++L QI A I+ + FV KLI FC S M+YA +F+ + PD
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEAMSEPD 94
Query: 120 GFLWNTMIRGFGRICELQKGFEFYKRMVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHV 179
++N+M RG+ R + F + ++ GI DN+TF LLK ++ G QLH
Sbjct: 95 IVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHC 154
Query: 180 CILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNE 239
+KLG + +VYV TL++MY +++ AR +FD + P +V +N +I Y NE
Sbjct: 155 LSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNE 214
Query: 240 ALGLFVQLLQSGVEPDEATLVVTISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLID 299
AL LF ++ ++P+E TL+ +S C+ LG+LD G+W+H + K++ K + V +LID
Sbjct: 215 ALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALID 274
Query: 300 MYAKCGAVEDSREMFYSMSDKNVVTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDV 359
M+AKCG+++D+ +F M K+ W+ MI+A A HG AE ++++F +M +E V+ PD++
Sbjct: 275 MFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ-PDEI 334
Query: 360 TFLGVLCACNHGGKVEEGRRYFDLMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKS 419
TFLG+L AC+H G+VEEGR+YF M F I P++KHYGSMVD+L RAG +E+AY+ I
Sbjct: 335 TFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDK 394
Query: 420 MPMDCNAIIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDT 479
+P+ ++WR LLAAC H N+ L E+V + E++ H DYV+L+N+YA + +W
Sbjct: 395 LPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYV 454
Query: 480 MKIRKSM-HRKGVQKPEPGNSYLDIN 504
+RK M RK V+ PG S +++N
Sbjct: 455 DSLRKVMKDRKAVK--VPGCSSIEVN 476
BLAST of Sed0014076 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 346.7 bits (888), Expect = 3.3e-95
Identity = 179/481 (37.21%), Postives = 282/481 (58.63%), Query Frame = 0
Query: 57 FQFLFRQCS---TVKDLNQIHARVIQLGFDQNLFVIGKLIEFCA-------------VSD 116
F F+ + C+ K+ QIH V++LG D +L+V LI S
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196
Query: 117 HGD-MNYAVLV---------------FDRIENPDGFLWNTMIRGFGRICELQKGFEFYKR 176
H D ++Y L+ FD I D WN MI G+ ++ E +K
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 177 MVNRGIRGDNFTFCFLLKISGQLGSIMLGNQLHVCILKLGFESHVYVRNTLVHMYGRLKE 236
M+ +R D T ++ Q GSI LG Q+H+ I GF S++ + N L+ +Y + E
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 237 IRIARNLFDEMPSPDLVAWNTLIDCYVSCGMYNEALGLFVQLLQSGVEPDEATLVVTISG 296
+ A LF+ +P D+++WNTLI Y +Y EAL LF ++L+SG P++ T++ +
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 297 CSALGALDFGRWVHSHVKRNGRGKTIA--VCNSLIDMYAKCGAVEDSREMFYSMSDKNVV 356
C+ LGA+D GRW+H ++ + +G T A + SLIDMYAKCG +E + ++F S+ K++
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 357 TWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVTFLGVLCACNHGGKVEEGRRYFDL 416
+WN MI A HG A+ + LFS+M ++ PDD+TF+G+L AC+H G ++ GR F
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQ-PDDITFVGLLSACSHSGMLDLGRHIFRT 496
Query: 417 MTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMDCNAIIWRTLLAACRMHGNVK 476
MT+ + + P L+HYG M+D+LG +G +EA ++I M M+ + +IW +LL AC+MHGNV+
Sbjct: 497 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVE 556
Query: 477 LGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTMKIRKSMHRKGVQKPEPGNSYLDI 504
LGE ++++IEP++ YVLL+N+YAS+G+WN+ K R ++ KG++K PG S ++I
Sbjct: 557 LGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK-VPGCSSIEI 615
BLAST of Sed0014076 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 342.8 bits (878), Expect = 4.7e-94
Identity = 168/482 (34.85%), Postives = 280/482 (58.09%), Query Frame = 0
Query: 54 EQRFQFLFRQCSTVKDLNQIHARVIQLGFDQNLFVIGKLIEFCAVSDHGDMNYAVLVFDR 113
E F ++ + + +I+A +I G Q+ F++ K+++FC + DM+YA +F++
Sbjct: 10 ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIE--DMDYATRLFNQ 69
Query: 114 IENPDGFLWNTMIRGFGRICELQKGFEFYKRMVNRGIR-GDNFTFCFLLKISGQLGSIML 173
+ NP+ FL+N++IR + YK+++ + D FTF F+ K LGS L
Sbjct: 70 VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 129
Query: 174 GNQLHVCILKLGFESHVYVRNTLVHMYGRLKEIRIARNLFDEMPSPDLVAWNTL------ 233
G Q+H + K G HV N L+ MY + ++ A +FDEM D+++WN+L
Sbjct: 130 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 189
Query: 234 -------------------------IDCYVSCGMYNEALGLFVQLLQSGVEPDEATLVVT 293
I Y G Y EA+ F ++ +G+EPDE +L+
Sbjct: 190 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 249
Query: 294 ISGCSALGALDFGRWVHSHVKRNGRGKTIAVCNSLIDMYAKCGAVEDSREMFYSMSDKNV 353
+ C+ LG+L+ G+W+H + +R G K VCN+LI+MY+KCG + + ++F M K+V
Sbjct: 250 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 309
Query: 354 VTWNTMIMALATHGDAEDALILFSKMLAEKVEVPDDVTFLGVLCACNHGGKVEEGRRYFD 413
++W+TMI A HG+A A+ F++M KV+ P+ +TFLG+L AC+H G +EG RYFD
Sbjct: 310 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVK-PNGITFLGLLSACSHVGMWQEGLRYFD 369
Query: 414 LMTKYFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMDCNAIIWRTLLAACRMHGNV 473
+M + + I+P ++HYG ++D+L RAG +E A ++ K+MPM ++ IW +LL++CR GN+
Sbjct: 370 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNL 429
Query: 474 KLGERVRSHVLEIEPDHSSDYVLLANMYASSGQWNDTMKIRKSMHRKGVQKPEPGNSYLD 504
+ H++E+EP+ +YVLLAN+YA G+W D ++RK + + ++K PG S ++
Sbjct: 430 DVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK-TPGGSLIE 487
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022987183.1 | 4.9e-250 | 81.01 | pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... | [more] |
XP_023516362.1 | 1.8e-249 | 80.81 | pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... | [more] |
KAG6589516.1 | 4.1e-249 | 81.01 | Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partia... | [more] |
KAG7023204.1 | 4.1e-249 | 81.01 | Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partia... | [more] |
XP_038880037.1 | 1.6e-248 | 82.54 | pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
A8MQA3 | 3.9e-101 | 41.40 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... | [more] |
Q0WQW5 | 3.4e-97 | 39.70 | Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... | [more] |
Q8LK93 | 5.8e-97 | 39.69 | Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... | [more] |
Q9LN01 | 4.6e-94 | 37.21 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9SIL5 | 6.7e-93 | 34.85 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1JI60 | 2.4e-250 | 81.01 | pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... | [more] |
A0A6J1E6Y6 | 6.4e-248 | 80.62 | pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... | [more] |
A0A6J1C0S9 | 8.4e-248 | 80.15 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like OS=Mom... | [more] |
A0A5A7UQ05 | 1.7e-240 | 80.00 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BWU9 | 1.7e-240 | 80.00 | pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... | [more] |
Match Name | E-value | Identity | Description | |
AT4G21065.1 | 2.8e-102 | 41.40 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G59720.1 | 2.4e-98 | 39.70 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G02980.1 | 4.1e-98 | 39.69 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08070.1 | 3.3e-95 | 37.21 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G20540.1 | 4.7e-94 | 34.85 | mitochondrial editing factor 21 | [more] |