Sed0013836 (gene) Chayote v1

Overview


Name	Sed0013836
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein RALF-like 34
Location	LG01: 776999 .. 777376 (+)
RNA-Seq Expression	Sed0013836
Synteny	Sed0013836

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAAGCTCCTCCTCATCACCGCCGCTCTCCTCCTCTCCGCCGCCGCCTCCGCCGCCGCTCACCTCTCCGTCGACACCTCCCTCAAGCTCATGGGCGACGCGCTCGAATGGCCAACCACTATCTCCCTACAACAGCAATACGAAGATCAAGATCAAGATCAGTTTTACGAAGATCAAGAACAAGATCCTCGCAGATCTCTCTTCTGGAGGCGAGTTCACTACTACATTTCCTACGGCGCTCTCGCCGCCAACCGGATTCCATGTCCGGCGCGCTCCGGCCGCCCTTACTACACGCACAACTGCTACAAGGCTCGCGGTCCGGTCAATCCCTACTCCCGCGGCTGCACCGCCATTACTCGCTGCCGCCGTTGA

mRNA sequence

ATGGCTTCCAAGCTCCTCCTCATCACCGCCGCTCTCCTCCTCTCCGCCGCCGCCTCCGCCGCCGCTCACCTCTCCGTCGACACCTCCCTCAAGCTCATGGGCGACGCGCTCGAATGGCCAACCACTATCTCCCTACAACAGCAATACGAAGATCAAGATCAAGATCAGTTTTACGAAGATCAAGAACAAGATCCTCGCAGATCTCTCTTCTGGAGGCGAGTTCACTACTACATTTCCTACGGCGCTCTCGCCGCCAACCGGATTCCATGTCCGGCGCGCTCCGGCCGCCCTTACTACACGCACAACTGCTACAAGGCTCGCGGTCCGGTCAATCCCTACTCCCGCGGCTGCACCGCCATTACTCGCTGCCGCCGTTGA

Coding sequence (CDS)

ATGGCTTCCAAGCTCCTCCTCATCACCGCCGCTCTCCTCCTCTCCGCCGCCGCCTCCGCCGCCGCTCACCTCTCCGTCGACACCTCCCTCAAGCTCATGGGCGACGCGCTCGAATGGCCAACCACTATCTCCCTACAACAGCAATACGAAGATCAAGATCAAGATCAGTTTTACGAAGATCAAGAACAAGATCCTCGCAGATCTCTCTTCTGGAGGCGAGTTCACTACTACATTTCCTACGGCGCTCTCGCCGCCAACCGGATTCCATGTCCGGCGCGCTCCGGCCGCCCTTACTACACGCACAACTGCTACAAGGCTCGCGGTCCGGTCAATCCCTACTCCCGCGGCTGCACCGCCATTACTCGCTGCCGCCGTTGA

Protein sequence

MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCRR

Homology

[Close]

BLAST of Sed0013836 vs. NCBI nr
Match: XP_023513191.1 (protein RALF-like 34 [Cucurbita pepo subsp. pepo] >KAG7011171.1 Protein RALF-like 34, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 182.6 bits (462), Expect = 2.1e-42
Identity = 94/125 (75.20%), Postives = 102/125 (81.60%), Query Frame = 0


Query: 1   MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYED 60
           MASKLL     +LL   ++A+AHL VDTSLKLM DALEWPTTIS+     D D D  ++D
Sbjct: 1   MASKLLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISI----PDLDHDHDHDD 60

Query: 61  QEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAI 120
             QDPRRSLFW RVHYYISYGALAANRIPCP RSGRPYYTHNCYKARGPVNPYSRGC+AI
Sbjct: 61  LHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAI 120

Query: 121 TRCRR 126
           TRCRR
Sbjct: 121 TRCRR 121

[Close]

BLAST of Sed0013836 vs. NCBI nr
Match: XP_038900702.1 (protein RALF-like 34 [Benincasa hispida])

HSP 1 Score: 181.8 bits (460), Expect = 3.6e-42
Identity = 96/125 (76.80%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 1   MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYED 60
           MASK LL+   +LL   +S++AHLSVDTSLKLM DALEWPTT SL +     D D    D
Sbjct: 1   MASKFLLLLFTILL-FISSSSAHLSVDTSLKLMADALEWPTTTSLIESATATDIDDDELD 60

Query: 61  QEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAI 120
            EQDPRRSLFWRRVHYYISYGALAANRIPCP RSGRPYYTHNCYKARGPVNPYSRGC+AI
Sbjct: 61  LEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAI 120

Query: 121 TRCRR 126
           TRCRR
Sbjct: 121 TRCRR 124

[Close]

BLAST of Sed0013836 vs. NCBI nr
Match: XP_022928024.1 (protein RALF-like 34 [Cucurbita moschata])

HSP 1 Score: 181.8 bits (460), Expect = 3.6e-42
Identity = 94/127 (74.02%), Postives = 102/127 (80.31%), Query Frame = 0


Query: 1   MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQ--QQYEDQDQDQFY 60
           MASKLL     +LL   ++A+AHL VDTSLKLM DALEWPTTIS+       D D D  +
Sbjct: 1   MASKLLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDH 60

Query: 61  EDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCT 120
           +D  QDPRRSLFW RVHYYISYGALAANRIPCP RSGRPYYTHNCYKARGPVNPYSRGC+
Sbjct: 61  DDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCS 120

Query: 121 AITRCRR 126
           AITRCRR
Sbjct: 121 AITRCRR 127

[Close]

BLAST of Sed0013836 vs. NCBI nr
Match: XP_008457868.1 (PREDICTED: protein RALF-like 34 [Cucumis melo])

HSP 1 Score: 181.0 bits (458), Expect = 6.2e-42
Identity = 97/126 (76.98%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 1   MASK-LLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYE 60
           MASK LL +   LLL   +S++AHLSVDTSLKLM DALEWPTT SL Q   D D D    
Sbjct: 1   MASKSLLFLLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTDDDLDDDL- 60

Query: 61  DQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTA 120
           D +QDPRRSLFWRRVHYYISYGAL+ANRIPCP RSGRPYYTHNCYKARGPVNPYSRGC+A
Sbjct: 61  DLQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSA 120

Query: 121 ITRCRR 126
           ITRCRR
Sbjct: 121 ITRCRR 125

[Close]

BLAST of Sed0013836 vs. NCBI nr
Match: KAG6571407.1 (Protein RALF-like 34, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-41
Identity = 95/126 (75.40%), Postives = 102/126 (80.95%), Query Frame = 0


Query: 1   MASKLLL-ITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYE 60
           MASKLL      LLL   ++A+AHL VDTSLKLM DALEWPTTIS+     D D D  ++
Sbjct: 1   MASKLLFPFFTILLLLLLSAASAHLPVDTSLKLMADALEWPTTISI----PDLDHDHDHD 60

Query: 61  DQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTA 120
           D  QDPRRSLFW RVHYYISYGALAANRIPCP RSGRPYYTHNCYKARGPVNPYSRGC+A
Sbjct: 61  DLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSA 120

Query: 121 ITRCRR 126
           ITRCRR
Sbjct: 121 ITRCRR 122

[Close]

BLAST of Sed0013836 vs. ExPASy Swiss-Prot
Match: Q9FHA6 (Protein RALF-like 34 OS=Arabidopsis thaliana OX=3702 GN=RALFL34 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.1e-28
Identity = 66/124 (53.23%), Postives = 88/124 (70.97%), Query Frame = 0


Query: 6   LLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQD- 65
           LL+  +LL   +   +  LS + SL L+ D  +WP  IS   +++  D ++ +E  E+D 
Sbjct: 8   LLLILSLLTFISLQRSESLSDNPSLTLLPDGFDWP--ISHSDEFDIIDGEESFEVTEEDD 67

Query: 66  ---PRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAIT 125
               RRSL+WRR  YYISYGAL+ANR+PCP RSGR YYTHNC++ARGPV+PYSRGC++IT
Sbjct: 68  GVTDRRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHNCFRARGPVHPYSRGCSSIT 127

[Close]

BLAST of Sed0013836 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.0e-08
Identity = 38/77 (49.35%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 49  YEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARG 108
           Y   +  + +E   +  RR L  RR   YISYGAL  N IPC +R G  YY  NC +   
Sbjct: 68  YGGGEMGEEFEMDSEINRRILATRR---YISYGALRRNTIPC-SRRGASYY--NCRRG-A 127

Query: 109 PVNPYSRGCTAITRCRR 126
             NPYSRGC+AITRCRR
Sbjct: 128 QANPYSRGCSAITRCRR 137

[Close]

BLAST of Sed0013836 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07
Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 53  DQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNP 112
           ++++F  D E + RR L  ++   YISYGAL  N +PC +R G  YY  NC K     NP
Sbjct: 51  EEEEFELDSESN-RRILATKK---YISYGALQKNSVPC-SRRGASYY--NC-KPGAQANP 110

Query: 113 YSRGCTAITRCR 125
           YSRGC+AITRCR
Sbjct: 111 YSRGCSAITRCR 114

[Close]

BLAST of Sed0013836 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.8e-05
Identity = 44/121 (36.36%), Postives = 61/121 (50.41%), Query Frame = 0


Query: 5   LLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQD 64
           + ++T   L +A  S ++   V    K  G   E   + +         +++F  D E +
Sbjct: 13  IAILTVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTA---------EEEFEMDSEIN 72

Query: 65  PRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCR 124
            RR L   +   YISYGAL  N +PC +R G  YY  NC +     NPYSRGC+AITRCR
Sbjct: 73  -RRILATTK---YISYGALRRNTVPC-SRRGASYY--NCRRG-AQANPYSRGCSAITRCR 116

Query: 125 R 126
           R
Sbjct: 133 R 116

[Close]

BLAST of Sed0013836 vs. ExPASy Swiss-Prot
Match: Q0V822 (Protein RALF-like 26 OS=Arabidopsis thaliana OX=3702 GN=RALFL26 PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 7.0e-04
Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 0


Query: 72  RRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCRR 126
           R+   Y++ G L   R P P     P+ +H  +K R PV+ YSRGC+ ITRCRR
Sbjct: 23  RKGRKYLNPGVLDRCRGPNPPAGCHPHNSH--HKPRVPVHNYSRGCSRITRCRR 74

[Close]

BLAST of Sed0013836 vs. ExPASy TrEMBL
Match: A0A6J1EJN3 (protein RALF-like 34 OS=Cucurbita moschata OX=3662 GN=LOC111434934 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.8e-42
Identity = 94/127 (74.02%), Postives = 102/127 (80.31%), Query Frame = 0


Query: 1   MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQ--QQYEDQDQDQFY 60
           MASKLL     +LL   ++A+AHL VDTSLKLM DALEWPTTIS+       D D D  +
Sbjct: 1   MASKLLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDH 60

Query: 61  EDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCT 120
           +D  QDPRRSLFW RVHYYISYGALAANRIPCP RSGRPYYTHNCYKARGPVNPYSRGC+
Sbjct: 61  DDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCS 120

Query: 121 AITRCRR 126
           AITRCRR
Sbjct: 121 AITRCRR 127

[Close]

BLAST of Sed0013836 vs. ExPASy TrEMBL
Match: A0A1S3C7S7 (protein RALF-like 34 OS=Cucumis melo OX=3656 GN=LOC103497450 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.0e-42
Identity = 97/126 (76.98%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 1   MASK-LLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYE 60
           MASK LL +   LLL   +S++AHLSVDTSLKLM DALEWPTT SL Q   D D D    
Sbjct: 1   MASKSLLFLLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTDDDLDDDL- 60

Query: 61  DQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTA 120
           D +QDPRRSLFWRRVHYYISYGAL+ANRIPCP RSGRPYYTHNCYKARGPVNPYSRGC+A
Sbjct: 61  DLQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSA 120

Query: 121 ITRCRR 126
           ITRCRR
Sbjct: 121 ITRCRR 125

[Close]

BLAST of Sed0013836 vs. ExPASy TrEMBL
Match: A0A0A0LMS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292820 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.3e-41
Identity = 95/126 (75.40%), Postives = 103/126 (81.75%), Query Frame = 0


Query: 1   MASKLLLITA-ALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYE 60
           MASK LL     LLL   +S++AHLSVDTSLKLM DALEWPTT SL Q   + D D    
Sbjct: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDL- 60

Query: 61  DQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTA 120
           D +QDPRRSLFWRRVHYYISYGAL+ANRIPCP RSGRPYYTHNCYKARGPVNPY+RGC+A
Sbjct: 61  DLQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSA 120

Query: 121 ITRCRR 126
           ITRCRR
Sbjct: 121 ITRCRR 125

[Close]

BLAST of Sed0013836 vs. ExPASy TrEMBL
Match: A0A1S3VP27 (protein RALF-like 34 OS=Vigna radiata var. radiata OX=3916 GN=LOC106777124 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.8e-32
Identity = 80/128 (62.50%), Postives = 94/128 (73.44%), Query Frame = 0


Query: 1   MASKLLLITAALLLSAAAS--AAAHLSV-DTSLKLMGDALEWPTTISLQQQYEDQDQDQF 60
           MAS L L+T AL L    +     H  + DT L LM DAL+WPTT+SL   Y+D D+D+ 
Sbjct: 1   MASSLPLLTLALFLCFLFTHHGGVHAQIDDTGLNLMSDALDWPTTMSL---YDDLDEDEE 60

Query: 61  YEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGC 120
            + +    RRSLFWRR+ YYISYGAL+ANRIPCP RSGR YYTHNCYKARGPV+PYSRGC
Sbjct: 61  EDVESGFSRRSLFWRRMKYYISYGALSANRIPCPPRSGRSYYTHNCYKARGPVHPYSRGC 120

Query: 121 TAITRCRR 126
           + ITRCRR
Sbjct: 121 SVITRCRR 125

[Close]

BLAST of Sed0013836 vs. ExPASy TrEMBL
Match: A0A151TIM7 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_013147 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.4e-31
Identity = 72/100 (72.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 27  DTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQD-PRRSLFWRRVHYYISYGALAA 86
           +T+L LM DAL+WPTT+SL    +D DQD   ED E    RRSLFWRR+ YYISYGAL+A
Sbjct: 3   ETTLNLMSDALDWPTTMSLYD--DDVDQDTEEEDVENGFSRRSLFWRRMKYYISYGALSA 62

Query: 87  NRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCRR 126
           NRIPCP RSGR YYTHNCYKARGPV+PYSRGC+ ITRCRR
Sbjct: 63  NRIPCPPRSGRSYYTHNCYKARGPVHPYSRGCSVITRCRR 100

[Close]

BLAST of Sed0013836 vs. TAIR 10
Match: AT5G67070.1 (ralf-like 34 )

HSP 1 Score: 125.6 bits (314), Expect = 2.9e-29
Identity = 66/124 (53.23%), Postives = 88/124 (70.97%), Query Frame = 0


Query: 6   LLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQD- 65
           LL+  +LL   +   +  LS + SL L+ D  +WP  IS   +++  D ++ +E  E+D 
Sbjct: 8   LLLILSLLTFISLQRSESLSDNPSLTLLPDGFDWP--ISHSDEFDIIDGEESFEVTEEDD 67

Query: 66  ---PRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAIT 125
               RRSL+WRR  YYISYGAL+ANR+PCP RSGR YYTHNC++ARGPV+PYSRGC++IT
Sbjct: 68  GVTDRRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHNCFRARGPVHPYSRGCSSIT 127

[Close]

BLAST of Sed0013836 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 58.2 bits (139), Expect = 5.7e-09
Identity = 38/77 (49.35%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 49  YEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARG 108
           Y   +  + +E   +  RR L  RR   YISYGAL  N IPC +R G  YY  NC +   
Sbjct: 68  YGGGEMGEEFEMDSEINRRILATRR---YISYGALRRNTIPC-SRRGASYY--NCRRG-A 127

Query: 109 PVNPYSRGCTAITRCRR 126
             NPYSRGC+AITRCRR
Sbjct: 128 QANPYSRGCSAITRCRR 137

[Close]

BLAST of Sed0013836 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 48.9 bits (115), Expect = 3.4e-06
Identity = 44/121 (36.36%), Postives = 61/121 (50.41%), Query Frame = 0


Query: 5   LLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQD 64
           + ++T   L +A  S ++   V    K  G   E   + +         +++F  D E +
Sbjct: 13  IAILTVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTA---------EEEFEMDSEIN 72

Query: 65  PRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCR 124
            RR L   +   YISYGAL  N +PC +R G  YY  NC +     NPYSRGC+AITRCR
Sbjct: 73  -RRILATTK---YISYGALRRNTVPC-SRRGASYY--NCRRG-AQANPYSRGCSAITRCR 116

Query: 125 R 126
           R
Sbjct: 133 R 116

[Close]

BLAST of Sed0013836 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 45.4 bits (106), Expect = 3.8e-05
Identity = 48/127 (37.80%), Postives = 58/127 (45.67%), Query Frame = 0


Query: 1   MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISL--QQQYEDQDQDQFY 60
           M  K+LLI   L L+  A +A                 W  T S    Q    +D +  Y
Sbjct: 1   MGIKILLILGLLTLAVVAESA--------------NATWTLTKSCVNGQGCIGEDGELDY 60

Query: 61  EDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCT 120
               +  RR L  RR   YISYGAL  N +PC +R GR YY  +C K R   NPY RGC+
Sbjct: 61  LMDSETNRRQLAARR--SYISYGALRKNNVPC-SRRGRSYY--DC-KKRKRANPYRRGCS 107

Query: 121 AITRCRR 126
            IT C R
Sbjct: 121 VITHCYR 107

[Close]

BLAST of Sed0013836 vs. TAIR 10
Match: AT1G28270.1 (ralf-like 4 )

HSP 1 Score: 44.7 bits (104), Expect = 6.5e-05
Identity = 45/125 (36.00%), Postives = 60/125 (48.00%), Query Frame = 0


Query: 1   MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYED 60
           M  K+LLI   L+L+  A      SV+ +  L    +     I       + D+ +   D
Sbjct: 1   MGVKMLLIFGLLILAMVAK-----SVNATYPLTKSCINGQGCIG------EDDELESLMD 60

Query: 61  QEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAI 120
            E + R+    RR   YI Y AL  N +PC +R GR YY  +C K R   NPY RGC+AI
Sbjct: 61  SETNRRQLARGRR---YIGYDALKKNNVPC-SRRGRSYY--DCKKRRRN-NPYRRGCSAI 107

Query: 121 TRCRR 126
           T C R
Sbjct: 121 THCYR 107

The following BLAST results are available for this feature:

BLAST of Sed0013836 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513191.1	2.1e-42	75.20	protein RALF-like 34 [Cucurbita pepo subsp. pepo] >KAG7011171.1 Protein RALF-lik...	[more]
XP_038900702.1	3.6e-42	76.80	protein RALF-like 34 [Benincasa hispida]	[more]
XP_022928024.1	3.6e-42	74.02	protein RALF-like 34 [Cucurbita moschata]	[more]
XP_008457868.1	6.2e-42	76.98	PREDICTED: protein RALF-like 34 [Cucumis melo]	[more]
KAG6571407.1	1.1e-41	75.40	Protein RALF-like 34, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0013836 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHA6	4.1e-28	53.23	Protein RALF-like 34 OS=Arabidopsis thaliana OX=3702 GN=RALFL34 PE=2 SV=1	[more]
Q9LUS7	8.0e-08	49.35	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q945T0	1.8e-07	50.00	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q8L9P8	4.8e-05	36.36	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q0V822	7.0e-04	44.44	Protein RALF-like 26 OS=Arabidopsis thaliana OX=3702 GN=RALFL26 PE=3 SV=1	[more]

BLAST of Sed0013836 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJN3	1.8e-42	74.02	protein RALF-like 34 OS=Cucurbita moschata OX=3662 GN=LOC111434934 PE=3 SV=1	[more]
A0A1S3C7S7	3.0e-42	76.98	protein RALF-like 34 OS=Cucumis melo OX=3656 GN=LOC103497450 PE=3 SV=1	[more]
A0A0A0LMS2	4.3e-41	75.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292820 PE=3 SV=1	[more]
A0A1S3VP27	4.8e-32	62.50	protein RALF-like 34 OS=Vigna radiata var. radiata OX=3916 GN=LOC106777124 PE=3 ...	[more]
A0A151TIM7	1.4e-31	72.00	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_013147 PE=3 SV=1	[more]

BLAST of Sed0013836 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67070.1	2.9e-29	53.23	ralf-like 34	[more]
AT3G16570.1	5.7e-09	49.35	rapid alkalinization factor 23	[more]
AT4G15800.1	3.4e-06	36.36	ralf-like 33	[more]
AT2G33775.1	3.8e-05	37.80	ralf-like 19	[more]
AT1G28270.1	6.5e-05	36.00	ralf-like 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 66..125 e-value: 3.7E-20 score: 72.6
None	No IPR available	PANTHER	PTHR33136:SF6	PROTEIN RALF-LIKE 34	coord: 5..125
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 5..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013836.1	Sed0013836.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region