Sed0013709 (gene) Chayote v1

Overview


Name	Sed0013709
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RAB GTPase homolog B1C
Location	LG10: 3465741 .. 3469600 (-)
RNA-Seq Expression	Sed0013709
Synteny	Sed0013709

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGTTCTTGACTTTCGCTCTCTGTTTCTGTGTATTTTTGCACAAATTTACACCGTAATCTTCGCCTTTGTTCGAGTTCTTCAAACTCCGATCAAACTGAGAAATCATACACCATTTTTTTGCGATTAAACCGTGCAGTCTGAAGCAGATCCAGCCGGAAAAGATGTCGTATGCTTACCTCTTCAAGTACATCGTCATCGGCGATACTGGTACGTTTCGATTTGCATTCTTGTTTCTTCAATTCTATGGCGTCGGATTTCACTTCTATGATTCGCATTATAATCCGAGAATCGGTTTCGAAATTAATCTCTATGATGTATTTGTGTTGCGAATTGAACGGTTTGGTCTTCAGGAGTTGGGAAATCGTGTCTTCTCCTTCAGTTTACGGATAATCGATTCCAACCTGTTCATGACCTAACTATTGGGGTTGAATTCGGAGCGAGGATGATCACGATTGAGAATAAGCCGATTAAGCTGCAGATTTGGGATACGGTATGTTGCTTTGGTTTCTAATTCTAAATTTCTGTTTGTTGCTGTTGGGTTACTCAAATCGAAGAAATGTGTATATTGTTGTGGTGCTGTGGTGTCGATCAACTGAATATGCTTTTTATTCCTTGTGTTGTGTCATTTTCTTCAGCAGTTTAGATTATACTCTCTGTTTTTGCATGATGTCTTTGACAACTTGTAAATTATCACTTCGAGTGTTTGAGGCAAGGAGAATGAAAATGATTATTAGACACGATGCGAATTGAGATAAGAATACGAGGAAGAATGATTATCAAGGAGAATTTTGTGCGAATTTGGAAAAAGAGAATGATTATCGAGAAAACTCTTGCTTATATTTGAGGTAAAAAGAATAATTACATAGTATGAGAAGAATAAAACGGTGAATATGGAGAAAATGAAAAATGGTTACGGAGAGAATGGAGATTTGTTATGGGTAGAACAAAAGGTAATTATGATTAGAATAAAAAGTGGTTATTGAAATGCGAGATTATGGAGAGAATGATTTTTAGTGGCTCAAACGTGGGGAAGATGATCATTCTCTTCATAATCATTCTCATCTCCTTCCCCTAAACACTCTCGATTGTAACGGAGTGTCCAAAATATGCTATCATTTTCCTTGCAAATTTATAATGTTTCCTTTGTCTTTTGTACCAACGTTTTGCATTTTCCTTGACTGGGATCTTCTTCGTACATATTATAATTGGAATCAAACTTAGCTACTTCCTCTTTTTCTCTTGTCTTTTTTAATTTTTATAATATATTTAACAAGTGGGACCATTGATAGGTTTGATCTAATGAAGGCAAGTAACTGACAATTAACAAGTCGGAACTTTTATTCTTTTTAGTTCAACAATTTTAGTGTTTAGGTCATTTTTATTCCTTCAAATATTAGGAACCAAAGGTAAAACTGACATAGCACAACTGTCATAACATATGTACCCTTGATCAAGAGGTCAGAGGCACGAATTCTCCCATCTCCATTGTTGAACGCCAAAAAAGGAACAAGAATTAGTCATTCCTTTTTTTTGCACTTCACTTGAATTTTGACACTGTAATTGTGGAATGTATGCTTGATTATATCTCCCAATTTAACCTATGGAAAATGTTGAATTGTTATCTGGTCAAGATTTTCCCCATTTTGGCAAAACTTGGTGTTTATACAGTTATGATGACCTCTTCTCTAATTGAATAAGAACTGGTAAGTGCTTACACAGTTCTAAATGTTAAAACTTGTATAATTGTACCAGGCCGGCCAAGAGTCGTTCAGGTCCATCACGAGGTCCTACTATAGAGGTGCTGCTGGTGCCTTGCTTGTCTATGACATCACCAGGTCCAATTTCTTCTCGATTGACTAAACTAGTACGCAAATGCGAAGTTTTTGCAACTTTTTTTTATATGCATCCTGAGACTTGTCATAAAAAGTTGTCCTTTGAAGTCATGTTGAAAATGAATGTCCAATTTTATTTTTAATGTGTGAATTTTTTTCATTCTAATGTACCATTACTAAGCTGCTTCATTATTCAGAAGGGAAACTTTCAATCACTTGGTTAGCTGGCTAGAAGATGCAAGGCAGCATGCAAATTCTAATATGACAATTATGCTAATTGGTAATAAGTGTGACCTCTCTCATAGAAGGGCTGTGAGCACAGAGGAGGGTGAACAGTTTGCAAGGGAGCATGGTTTAATCTTCATGGAGGCATCTGCTAAAACTGCACAGAATGTTGAAGAGGTAGACCTAAAATATGCTTATGTTGAAGTACTTTGAAGCAGTAAATTTTATTTATAGTATAGTACGAAGAACATTAAAGAAATTCAGTCTGATCTCTAAATCACAAGCACCTCATTTTTAGGCATTTGTAAGGACAGCAGGAACCATATTCAAGAAGATTCAAGATGGAGTGTTCGACGTTTCAAATGAGGTTAACATCCATCTCTTATCTTTTCTACTTCAATGTACATTTCCGATCTTATAATTTTGGTCAAATTATAGTTCCATTGTATTAATGGTTTGTCGAGGGGCCGGGGTATAAACAAAGTTATCCTACATTGGTTAGATAAAGGGAATTAGGGAAGATCGTAGGTATAGAAGTGAGGACAAACATCTCAATTGGTATGAAATTTTTTGGATGAAGCAAAAACAGAATCACTAGGGCTCATGTCTAAAGTGGATAATATCATCATATTGATGTATAGATAATCCTAGGTTTTTCGTTCTTAATAATTGGCATCAGAGCTAGGCTGTAGAACAATGACAGTAGGATATGAGAAATTTGTTACTTATAATGGATCATACTTTTTATTTTAGAAGTGCGAGATATTGGAGTCATGGCAAAAATCTATGGTAAAAAGGTTTATCAATCTTACAAAGTACTCTCAATAGAAGAGGAGTTTGGTCTAGTTTTAAATTAGAACGGATTGACTATTTGTGAGGACATTCATTCTTTGTGTAAAGGGTGGATTAAATCCTTAAATGCTCAACGTGAACACCAAAGATGAGCCCAATGAGAGGCTTAGTAGTACTTTGTTCGAGGGAAGAATTATTAGGATTTGGGATACAAACAAAATTGTCTCACATTAGTTAGTTAAGGGATAGATCATAACTCATGGGCATATAAGTGATGACAACCATGTCTATTGATACGAGGTATTTTTGGTGAAATAAAAACCAAAAGCCTTGAGGGTTATGCTCAAAGTGGACAACATCATACCAACCAATATGATGTTAAAAACGCCTTTTAGGTGAAACAAAGAAACAAAAACGGACAACATACCAATGTGAATATCAATATCCCAATTTGTGATTTTGTTACGGGAAAGAAGAGTAAAACTCCTCTACATTTGGCTTATGTGGCGCTCTTGTGTGCCACAAAAAAATATTTATTTTTCAATATTTTCTTTTACGACATCAATTTTTGTGGCACATGTAGAGGTCCTCTACACATCCATGTGTAGAAGAGTCTTACTCGGGAAAGAATGAATTGAATGTTTATATGTTGGTGATGGTGCATTTTTGTGTCATGCTCAGTCTTATGGAATCAAAGTTGGATATGGTGGGGTACCAGGACCAGCAGGAGGCAGGGATGGGTCAACTTCCCAAGTTGGAAACTGTTGCAGCAGTTGAACCTTGATATCATATAGAAACCAAACTAGCTGACTTCAACATGAATGTGGCCTAATTCAATATTTTCAATATTATTTTTTTTCAACAATCATTCCTCTTGTGCTTGCTGTGAAATGTGAATATTGGTGCCTCCCTCCACCAATAATACAAAGAGAGCAGAAGAAGCTTTTGTGTTAAAAGAATACCCATGACCTTTGAATGCTGGGCTACCAATATATGCTGTCAATTCAAT

mRNA sequence

CTCGTTCTTGACTTTCGCTCTCTGTTTCTGTGTATTTTTGCACAAATTTACACCGTAATCTTCGCCTTTGTTCGAGTTCTTCAAACTCCGATCAAACTGAGAAATCATACACCATTTTTTTGCGATTAAACCGTGCAGTCTGAAGCAGATCCAGCCGGAAAAGATGTCGTATGCTTACCTCTTCAAGTACATCGTCATCGGCGATACTGGAGTTGGGAAATCGTGTCTTCTCCTTCAGTTTACGGATAATCGATTCCAACCTGTTCATGACCTAACTATTGGGGTTGAATTCGGAGCGAGGATGATCACGATTGAGAATAAGCCGATTAAGCTGCAGATTTGGGATACGGCCGGCCAAGAGTCGTTCAGGTCCATCACGAGGTCCTACTATAGAGGTGCTGCTGGTGCCTTGCTTGTCTATGACATCACCAGAAGGGAAACTTTCAATCACTTGGTTAGCTGGCTAGAAGATGCAAGGCAGCATGCAAATTCTAATATGACAATTATGCTAATTGGTAATAAGTGTGACCTCTCTCATAGAAGGGCTGTGAGCACAGAGGAGGGTGAACAGTTTGCAAGGGAGCATGGTTTAATCTTCATGGAGGCATCTGCTAAAACTGCACAGAATGTTGAAGAGGCATTTGTAAGGACAGCAGGAACCATATTCAAGAAGATTCAAGATGGAGTGTTCGACGTTTCAAATGAGTCTTATGGAATCAAAGTTGGATATGGTGGGGTACCAGGACCAGCAGGAGGCAGGGATGGGTCAACTTCCCAAGTTGGAAACTGTTGCAGCAGTTGAACCTTGATATCATATAGAAACCAAACTAGCTGACTTCAACATGAATGTGGCCTAATTCAATATTTTCAATATTATTTTTTTTCAACAATCATTCCTCTTGTGCTTGCTGTGAAATGTGAATATTGGTGCCTCCCTCCACCAATAATACAAAGAGAGCAGAAGAAGCTTTTGTGTTAAAAGAATACCCATGACCTTTGAATGCTGGGCTACCAATATATGCTGTCAATTCAAT

Coding sequence (CDS)

ATGTCGTATGCTTACCTCTTCAAGTACATCGTCATCGGCGATACTGGAGTTGGGAAATCGTGTCTTCTCCTTCAGTTTACGGATAATCGATTCCAACCTGTTCATGACCTAACTATTGGGGTTGAATTCGGAGCGAGGATGATCACGATTGAGAATAAGCCGATTAAGCTGCAGATTTGGGATACGGCCGGCCAAGAGTCGTTCAGGTCCATCACGAGGTCCTACTATAGAGGTGCTGCTGGTGCCTTGCTTGTCTATGACATCACCAGAAGGGAAACTTTCAATCACTTGGTTAGCTGGCTAGAAGATGCAAGGCAGCATGCAAATTCTAATATGACAATTATGCTAATTGGTAATAAGTGTGACCTCTCTCATAGAAGGGCTGTGAGCACAGAGGAGGGTGAACAGTTTGCAAGGGAGCATGGTTTAATCTTCATGGAGGCATCTGCTAAAACTGCACAGAATGTTGAAGAGGCATTTGTAAGGACAGCAGGAACCATATTCAAGAAGATTCAAGATGGAGTGTTCGACGTTTCAAATGAGTCTTATGGAATCAAAGTTGGATATGGTGGGGTACCAGGACCAGCAGGAGGCAGGGATGGGTCAACTTCCCAAGTTGGAAACTGTTGCAGCAGTTGA

Protein sequence

MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNKCDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSNESYGIKVGYGGVPGPAGGRDGSTSQVGNCCSS

Homology

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BLAST of Sed0013709 vs. NCBI nr
Match: KAG7026687.1 (Ras-related protein RABB1c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 201/212 (94.81%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 194 MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 253

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHAN+NMTIMLIGNK
Sbjct: 254 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 313

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
            DL+HRRAVSTEEGEQFA+EHGL+FMEASAKTAQNVEEAFVRTA TIFKKIQDGVFDVSN
Sbjct: 314 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 373

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCCSS 213
           ESYGIKVGYGG+PGPAGGR+GS+SQVG CCS+
Sbjct: 374 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCSN 405

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BLAST of Sed0013709 vs. NCBI nr
Match: KAG6594717.1 (Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 201/212 (94.81%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 194 MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 253

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHAN+NMTIMLIGNK
Sbjct: 254 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 313

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
            DL+HRRAVSTEEGEQFA+EHGL+FMEASAKTAQNVEEAFVRTA TIFKKIQDGVFDVSN
Sbjct: 314 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 373

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCCSS 213
           ESYGIKVGYGG+PGPAGGR+GS+SQVG CCS+
Sbjct: 374 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCSN 405

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BLAST of Sed0013709 vs. NCBI nr
Match: XP_022926861.1 (ras-related protein RABB1c-like [Cucurbita moschata] >XP_023003336.1 ras-related protein RABB1c-like [Cucurbita maxima] >XP_023518311.1 ras-related protein RABB1c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 201/212 (94.81%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHAN+NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
            DL+HRRAVSTEEGEQFA+EHGL+FMEASAKTAQNVEEAFVRTA TIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCCSS 213
           ESYGIKVGYGG+PGPAGGR+GS+SQVG CCS+
Sbjct: 181 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCSN 212

[Close]

BLAST of Sed0013709 vs. NCBI nr
Match: XP_021993009.1 (ras-related protein RABB1c [Helianthus annuus] >KAF5780624.1 putative small monomeric GTPase [Helianthus annuus])

HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110
Identity = 196/211 (92.89%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN+NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
           CDL+HRRAVSTEEGEQFA+EHGLIFMEASAKTAQNVEEAF++TAGTI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCCS 212
           ESYGIKVGYGG+PGP+GGRDGS+SQ G CCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211

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BLAST of Sed0013709 vs. NCBI nr
Match: XP_041991622.1 (ras-related protein RABB1c isoform X2 [Salvia splendens])

HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110
Identity = 196/211 (92.89%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDA+QHAN NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDAKQHANPNMTIMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
           CDL+HRRAVSTEEGEQFA+EHGLIFMEASAKTAQNVEEAF++TAGTI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCCS 212
           ESYGIKVGYGG+PGP+GGRDGS+SQVG CCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQVGGCCS 211

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BLAST of Sed0013709 vs. ExPASy Swiss-Prot
Match: P92963 (Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 1.2e-112
Identity = 195/210 (92.86%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN+NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
           CDL+HRRAVSTEEGEQFA+EHGLIFMEASAKTAQNVEEAF++TA TI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCC 211
           ESYGIKVGYGG+PGP+GGRDGSTSQ G CC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

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BLAST of Sed0013709 vs. ExPASy Swiss-Prot
Match: P49104 (Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 2.2e-106
Identity = 189/211 (89.57%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN+NMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
           CDLSHRRAVS EEGEQFA+EHGLIFMEASAKTAQNVEEAFV+TAG I+KKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCCS 212
           ESYGIKVGY  +PG +GG   S+SQ G CCS
Sbjct: 181 ESYGIKVGY-AIPGQSGGAGSSSSQGGGCCS 210

[Close]

BLAST of Sed0013709 vs. ExPASy Swiss-Prot
Match: P49103 (Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2)

HSP 1 Score: 383.6 bits (984), Expect = 1.4e-105
Identity = 191/211 (90.52%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN+NMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
           CDLSHRRAVS EEGEQFA+EHGLIFMEASAKTAQNVEEAFV+TAG I+KKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCCS 212
           ESYGIKVGY  VPG +GG  GS+SQ G CCS
Sbjct: 181 ESYGIKVGY-VVPGQSGGA-GSSSQGGGCCS 209

[Close]

BLAST of Sed0013709 vs. ExPASy Swiss-Prot
Match: Q38922 (Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.3e-100
Identity = 174/210 (82.86%), Postives = 191/210 (90.95%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSY YLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARM+T++ +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
           CDL+H+RAVS EEG+QFA+EHGL+F+EASA+TAQNVEEAF+ TA  I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCC 211
           ES GIK+GYG   G AGGRDG+ SQ G CC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

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BLAST of Sed0013709 vs. ExPASy Swiss-Prot
Match: Q39570 (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC4 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.8e-97
Identity = 177/215 (82.33%), Postives = 191/215 (88.84%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMI I+ K IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
           CDL+HRRAV+TEEGEQFA+EHGLIF+E SA+TA NVEEAF+ TA  I+KKIQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGR-----DGSTSQVGNCC 211
           ESYGIKVGYGG  G AG +     +G  ++  +CC
Sbjct: 181 ESYGIKVGYGG--GNAGPQTVKPGEGGAAKSSSCC 213

[Close]

BLAST of Sed0013709 vs. ExPASy TrEMBL
Match: A0A6J1KNY2 (ras-related protein RABB1c-like OS=Cucurbita maxima OX=3661 GN=LOC111496973 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.1e-112
Identity = 201/212 (94.81%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHAN+NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
            DL+HRRAVSTEEGEQFA+EHGL+FMEASAKTAQNVEEAFVRTA TIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCCSS 213
           ESYGIKVGYGG+PGPAGGR+GS+SQVG CCS+
Sbjct: 181 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCSN 212

[Close]

BLAST of Sed0013709 vs. ExPASy TrEMBL
Match: A0A6J1EG19 (ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111433845 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.1e-112
Identity = 201/212 (94.81%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHAN+NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
            DL+HRRAVSTEEGEQFA+EHGL+FMEASAKTAQNVEEAFVRTA TIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCCSS 213
           ESYGIKVGYGG+PGPAGGR+GS+SQVG CCS+
Sbjct: 181 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCSN 212

[Close]

BLAST of Sed0013709 vs. ExPASy TrEMBL
Match: A0A251T8H1 (Putative RAB GTPase OS=Helianthus annuus OX=4232 GN=AT-RAB2 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.2e-111
Identity = 196/211 (92.89%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN+NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
           CDL+HRRAVSTEEGEQFA+EHGLIFMEASAKTAQNVEEAF++TAGTI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCCS 212
           ESYGIKVGYGG+PGP+GGRDGS+SQ G CCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211

[Close]

BLAST of Sed0013709 vs. ExPASy TrEMBL
Match: A0A7J6G8J8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_021439 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 195/211 (92.42%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN+NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
           CDL+HRRAVSTEEGEQFA+EHGLIFMEASAKTAQNVEEAF++TAGTI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCCS 212
           ESYGIKVGYGG+PGP+GGRDG++SQ G CCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGASSQAGGCCS 211

[Close]

BLAST of Sed0013709 vs. ExPASy TrEMBL
Match: A0A6L2LTB2 (Ras-related protein RABB1c OS=Tanacetum cinerariifolium OX=118510 GN=Tci_036468 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 196/211 (92.89%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN+NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
           CDL+HRRAVSTEEGEQFA+EHGLIFMEASAKTAQNVEEAF+ TAGTI+KKIQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFINTAGTIYKKIQEGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCCS 212
           ESYGIKVGYGG+PGP+GGRDGS+SQ G CCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211

[Close]

BLAST of Sed0013709 vs. TAIR 10
Match: AT4G17170.1 (RAB GTPase homolog B1C )

HSP 1 Score: 407.1 bits (1045), Expect = 8.4e-114
Identity = 195/210 (92.86%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN+NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
           CDL+HRRAVSTEEGEQFA+EHGLIFMEASAKTAQNVEEAF++TA TI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCC 211
           ESYGIKVGYGG+PGP+GGRDGSTSQ G CC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]

BLAST of Sed0013709 vs. TAIR 10
Match: AT4G35860.1 (GTP-binding 2 )

HSP 1 Score: 366.3 bits (939), Expect = 1.6e-101
Identity = 174/210 (82.86%), Postives = 191/210 (90.95%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSY YLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARM+T++ +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
           CDL+H+RAVS EEG+QFA+EHGL+F+EASA+TAQNVEEAF+ TA  I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCC 211
           ES GIK+GYG   G AGGRDG+ SQ G CC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]

BLAST of Sed0013709 vs. TAIR 10
Match: AT4G17160.1 (RAB GTPase homolog B1A )

HSP 1 Score: 329.7 bits (844), Expect = 1.7e-90
Identity = 164/210 (78.10%), Postives = 177/210 (84.29%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAY FKYI+IGDTGVGKSCLLL+FTD RFQ VHDLTIGVEFGA+ ITI+NKPIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNK 120
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHL SWLE+ARQHA+ NMT MLIGNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 121 CDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSN 180
           CDL  +R VSTEEGEQFAREHGLIFMEASAKTA NVEEAFV TA TI+K+IQDGV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 181 ESYGIKVGYGGVPGPAGGRDGSTSQVGNCC 211
           E        G  PGP GG+D S+SQ    C
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGC 203

[Close]

BLAST of Sed0013709 vs. TAIR 10
Match: AT4G35860.2 (GTP-binding 2 )

HSP 1 Score: 275.8 bits (704), Expect = 2.9e-74
Identity = 131/164 (79.88%), Postives = 147/164 (89.63%), Query Frame = 0


Query: 47  MITIENKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQ 106
           M+T++ +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQ
Sbjct: 1   MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60

Query: 107 HANSNMTIMLIGNKCDLSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGT 166
           HAN NM+IMLIGNKCDL+H+RAVS EEG+QFA+EHGL+F+EASA+TAQNVEEAF+ TA  
Sbjct: 61  HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120

Query: 167 IFKKIQDGVFDVSNESYGIKVGYGGVPGPAGGRDGSTSQVGNCC 211
           I + IQDGVFDVSNES GIK+GYG   G AGGRDG+ SQ G CC
Sbjct: 121 ILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCC 164

[Close]

BLAST of Sed0013709 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 192.6 bits (488), Expect = 3.3e-49
Identity = 100/214 (46.73%), Postives = 131/214 (61.21%), Query Frame = 0


Query: 3   YAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT 62
           Y YLFK ++IGD+GVGKS LL +FT N F      TIGVEF  R + +++K IK QIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDT 69

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANSNMTIMLIGNKCD 122
           AGQE +R+IT +YYRGA GALLVYD+TR  TF ++ +WL++ R H + N+ +ML+GNK D
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD 129

Query: 123 LSHRRAVSTEEGEQFAREHGLIFMEASAKTAQNVEEAFVRTAGTIFKKIQDGVFDVSNES 182
           L H  AV TE+ + FA +  L FME SA  A NVE AF      I   +     + ++ES
Sbjct: 130 LRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASES 189

Query: 183 YGIKVGYGGVPGPAG----GRDGSTSQVGNCCSS 213
                    VP        G+D S  + G CCS+
Sbjct: 190 -------ANVPSKGDKIDIGKDVSAVKKGGCCSN 216

The following BLAST results are available for this feature:

BLAST of Sed0013709 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026687.1	1.3e-111	94.81	Ras-related protein RABB1c [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6594717.1	1.3e-111	94.81	Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022926861.1	1.3e-111	94.81	ras-related protein RABB1c-like [Cucurbita moschata] >XP_023003336.1 ras-related...	[more]
XP_021993009.1	1.1e-110	92.89	ras-related protein RABB1c [Helianthus annuus] >KAF5780624.1 putative small mono...	[more]
XP_041991622.1	1.4e-110	92.89	ras-related protein RABB1c isoform X2 [Salvia splendens]	[more]

BLAST of Sed0013709 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92963	1.2e-112	92.86	Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1	[more]
P49104	2.2e-106	89.57	Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1	[more]
P49103	1.4e-105	90.52	Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2	[more]
Q38922	2.3e-100	82.86	Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1	[more]
Q39570	1.8e-97	82.33	GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC4 PE=3 SV=...	[more]

BLAST of Sed0013709 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KNY2	6.1e-112	94.81	ras-related protein RABB1c-like OS=Cucurbita maxima OX=3661 GN=LOC111496973 PE=4...	[more]
A0A6J1EG19	6.1e-112	94.81	ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111433845 PE...	[more]
A0A251T8H1	5.2e-111	92.89	Putative RAB GTPase OS=Helianthus annuus OX=4232 GN=AT-RAB2 PE=4 SV=1	[more]
A0A7J6G8J8	1.2e-110	92.42	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_021439 PE=4 SV=1	[more]
A0A6L2LTB2	1.2e-110	92.89	Ras-related protein RABB1c OS=Tanacetum cinerariifolium OX=118510 GN=Tci_036468 ...	[more]

BLAST of Sed0013709 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17170.1	8.4e-114	92.86	RAB GTPase homolog B1C	[more]
AT4G35860.1	1.6e-101	82.86	GTP-binding 2	[more]
AT4G17160.1	1.7e-90	78.10	RAB GTPase homolog B1A	[more]
AT4G35860.2	2.9e-74	79.88	GTP-binding 2	[more]
AT5G45750.1	3.3e-49	46.73	RAB GTPase homolog A1C	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 30..46 score: 32.76 coord: 145..167 score: 43.58 coord: 7..28 score: 52.15 coord: 110..123 score: 50.15 coord: 48..70 score: 51.31
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..170 e-value: 1.9E-36 score: 137.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..199 e-value: 9.9E-6 score: 31.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..170 e-value: 1.3E-105 score: 366.8
None	No IPR available	PANTHER	PTHR47979:SF55	RAS-RELATED PROTEIN RABB1C-LIKE	coord: 1..190
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..190
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..202 score: 36.036911
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..168 score: 9.724894
None	No IPR available	CDD	cd01866	Rab2	coord: 3..170 e-value: 1.08691E-128 score: 357.118
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..170 e-value: 3.6E-12 score: 36.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..167 e-value: 4.5E-62 score: 208.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..198 score: 20.035517
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..194 e-value: 2.6E-71 score: 241.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..179
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..160 e-value: 5.3E-33 score: 112.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013709.1	Sed0013709.1	mRNA
Sed0013709.2	Sed0013709.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding