Sed0013489 (gene) Chayote v1

Overview


Name	Sed0013489
Type	gene
Organism	Sechium edule (Chayote v1)
Description	VQ motif-containing protein 31
Location	LG03: 47624363 .. 47624918 (-)
RNA-Seq Expression	Sed0013489
Synteny	Sed0013489

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGAATAATCAAAGCCAAGCTTGTGTTTCAATCAATTAATAAGGCATCATTGTGATGGACAAGGAAGCTGGCAGCCAACAAAGTCATGTCAGGTGCAACCCTTTGACGACGTTCGTTCAGACCGACGCGACGACGTTTCGAGAGATCGTGCAACGTCTGACCGGGCCATCGGAAAGCCATACGCCATCATCGAAGGCGACGGGATCAAAGAGGCTAACCACAACCTCCAAACTGCATGAAAGAAGACACTTGACAAGACCAAGGCTGCAAATTGTGAAACCACCTCCTTCCCATTTCAAGGCTACTACTTCCATTTCGGGGGAGCATCCTAGCTTCGTTAAGAGCCCGGTCGGGACGCCATCGAAGATCTTGTCGAAGCTGTCAATCGGGGACGGCGAGAAGGAACTGAATAGCATTGAAGAAGAGAAGGCAATCAAAGAAAGGAGGTTCTATTTGCATCCATCTCCAAGGTCAATGCCTGGCTCTGCTCGACCATTGTTGCTTCCATTATTTCCTTTGGAATCTCCAAAAAACATGTCAGGAAACACAAAATAA

mRNA sequence

GTGGAATAATCAAAGCCAAGCTTGTGTTTCAATCAATTAATAAGGCATCATTGTGATGGACAAGGAAGCTGGCAGCCAACAAAGTCATGTCAGGTGCAACCCTTTGACGACGTTCGTTCAGACCGACGCGACGACGTTTCGAGAGATCGTGCAACGTCTGACCGGGCCATCGGAAAGCCATACGCCATCATCGAAGGCGACGGGATCAAAGAGGCTAACCACAACCTCCAAACTGCATGAAAGAAGACACTTGACAAGACCAAGGCTGCAAATTGTGAAACCACCTCCTTCCCATTTCAAGGCTACTACTTCCATTTCGGGGGAGCATCCTAGCTTCGTTAAGAGCCCGGTCGGGACGCCATCGAAGATCTTGTCGAAGCTGTCAATCGGGGACGGCGAGAAGGAACTGAATAGCATTGAAGAAGAGAAGGCAATCAAAGAAAGGAGGTTCTATTTGCATCCATCTCCAAGGTCAATGCCTGGCTCTGCTCGACCATTGTTGCTTCCATTATTTCCTTTGGAATCTCCAAAAAACATGTCAGGAAACACAAAATAA

Coding sequence (CDS)

ATGGACAAGGAAGCTGGCAGCCAACAAAGTCATGTCAGGTGCAACCCTTTGACGACGTTCGTTCAGACCGACGCGACGACGTTTCGAGAGATCGTGCAACGTCTGACCGGGCCATCGGAAAGCCATACGCCATCATCGAAGGCGACGGGATCAAAGAGGCTAACCACAACCTCCAAACTGCATGAAAGAAGACACTTGACAAGACCAAGGCTGCAAATTGTGAAACCACCTCCTTCCCATTTCAAGGCTACTACTTCCATTTCGGGGGAGCATCCTAGCTTCGTTAAGAGCCCGGTCGGGACGCCATCGAAGATCTTGTCGAAGCTGTCAATCGGGGACGGCGAGAAGGAACTGAATAGCATTGAAGAAGAGAAGGCAATCAAAGAAAGGAGGTTCTATTTGCATCCATCTCCAAGGTCAATGCCTGGCTCTGCTCGACCATTGTTGCTTCCATTATTTCCTTTGGAATCTCCAAAAAACATGTCAGGAAACACAAAATAA

Protein sequence

MDKEAGSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHTPSSKATGSKRLTTTSKLHERRHLTRPRLQIVKPPPSHFKATTSISGEHPSFVKSPVGTPSKILSKLSIGDGEKELNSIEEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPKNMSGNTK

Homology

[Close]

BLAST of Sed0013489 vs. NCBI nr
Match: XP_038880928.1 (VQ motif-containing protein 31 [Benincasa hispida])

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-57
Identity = 124/157 (78.98%), Postives = 132/157 (84.08%), Query Frame = 0


Query: 4   EAGSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHTPSSKATGSKRLTTTSKLHER 63
           E G  QSHV C PLTTFVQTD TTFRE+VQRLTGPSESHT   KA GSKR TT SKLHER
Sbjct: 2   EKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTMQPKAFGSKRPTTASKLHER 61

Query: 64  RHLTRPRLQIVKPPPSHFKATTSISGEHPSFVKSPVGTPSKILSKLSIGDGEK-ELNSIE 123
           RHLTRP+LQIVKP PSHFK TT    EHPS++ SPVGTPSKILSKLSIGD EK +LN++E
Sbjct: 62  RHLTRPKLQIVKPCPSHFKPTT----EHPSYITSPVGTPSKILSKLSIGDEEKDQLNNME 121

Query: 124 EEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPK 160
           EEKAIKERRFYLHPSPRSMP  A+P LL LFPLESPK
Sbjct: 122 EEKAIKERRFYLHPSPRSMPAYAQPELLSLFPLESPK 154

[Close]

BLAST of Sed0013489 vs. NCBI nr
Match: XP_022149395.1 (VQ motif-containing protein 31 [Momordica charantia])

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-57
Identity = 125/158 (79.11%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 4   EAGSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHTPSSKATG-SKRLTTTSKLHE 63
           E  + QS V C PLTTFVQTD TTFRE+VQRLTGPSESHTP SKA G SKR   TSKLHE
Sbjct: 2   EKAANQSLVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTPPSKAAGSSKRPIATSKLHE 61

Query: 64  RRHLTRPRLQIVKPPPSH-FKATTSISGEHPSFVKSPVGTPSKILSKLSIGDGEKELNSI 123
           RRHLTRP+LQIVKP  SH FK T+ IS EHPS   SP+GTPSKILSKLSIGDGEKELN++
Sbjct: 62  RRHLTRPKLQIVKPAASHFFKPTSCISSEHPSCTSSPLGTPSKILSKLSIGDGEKELNAM 121

Query: 124 EEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPK 160
           EEEKAIKERRFYLHPSPRSMPG A+P LL LFPLESPK
Sbjct: 122 EEEKAIKERRFYLHPSPRSMPGYAQPELLTLFPLESPK 159

[Close]

BLAST of Sed0013489 vs. NCBI nr
Match: XP_031740607.1 (VQ motif-containing protein 31-like [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 2.0e-56
Identity = 125/163 (76.69%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 4   EAGSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHTPSSKATGSKRLTTTSKLHER 63
           E G  QSHV C PLTTFVQTD  TFRE+VQRLTGPSESHT SSK  GS+R TTTSKLHER
Sbjct: 2   EKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHER 61

Query: 64  RHL-TRPRLQIVKPPPSHFKATTSISGEHPSFVKSPVGTPSKILSKLSIGDGEK-ELNSI 123
           R L TRP+LQIVKP PSHFKAT    GEHPS++ SP+GTPSKILSKLSIGD EK ELN++
Sbjct: 62  RQLITRPKLQIVKPCPSHFKATI---GEHPSYITSPLGTPSKILSKLSIGDEEKEELNNM 121

Query: 124 EEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPKNMSGN 165
           EEEKAIKERRFYLHPSPRSMP  A+P LL LFPLESPK +S +
Sbjct: 122 EEEKAIKERRFYLHPSPRSMPIYAQPELLSLFPLESPKKVSNH 161

[Close]

BLAST of Sed0013489 vs. NCBI nr
Match: XP_023518304.1 (VQ motif-containing protein 31 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.3 bits (578), Expect = 1.0e-55
Identity = 123/168 (73.21%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 4   EAGSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHT-PSSKATGSKRLTTTSKLHE 63
           E    Q+ V+C PLTTFVQTD T FREIVQRLTGPSES+T PSSKA GSKR T+TSKLHE
Sbjct: 2   EKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRPTSTSKLHE 61

Query: 64  RRHLTRPRLQIVKPPPSHFKATTSIS--------GEHPSFVKSPVGTPSKILSKLSIGDG 123
           RRHLTRP+LQIVKP  SHFK  + I+         +HPSF+ SPVGTPSKI+SKLSIGDG
Sbjct: 62  RRHLTRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIMSKLSIGDG 121

Query: 124 EKELNSIEEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPKNMS 163
           EKELNSIEEEKA +E+RFYLHPSPRSM GSA+P LL LFPLESPK  S
Sbjct: 122 EKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTS 169

[Close]

BLAST of Sed0013489 vs. NCBI nr
Match: XP_022966462.1 (VQ motif-containing protein 31 [Cucurbita maxima])

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-55
Identity = 122/170 (71.76%), Postives = 137/170 (80.59%), Query Frame = 0


Query: 4   EAGSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHT-PSSKATGSKRLTTTSKLHE 63
           E    Q+ V+C PLTTFVQTD T FRE+VQRLTGPSES+T PSSKATGSKR T+TSKLHE
Sbjct: 26  EKPGTQTPVKCKPLTTFVQTDTTAFREVVQRLTGPSESYTLPSSKATGSKRPTSTSKLHE 85

Query: 64  RRHLTRPRLQIVKPPPSHFKATTSIS--------GEHPSFVKSPVGTPSKILSKLSIGDG 123
           RRHLTRP+LQIVKP  SHFK  + I+         +HPSF+ SPVGTP KI+SKLSIGDG
Sbjct: 86  RRHLTRPKLQIVKPSLSHFKPPSFITSPVGTPPRADHPSFITSPVGTPLKIMSKLSIGDG 145

Query: 124 EKELNSIEEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPKNMSGN 165
           EKELNSIEEE+A +E+RFYLHPSPRSM GSA+P LL LFPLESPK  S N
Sbjct: 146 EKELNSIEEERATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSQN 195

[Close]

BLAST of Sed0013489 vs. ExPASy Swiss-Prot
Match: Q9FNP0 (VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.6e-35
Identity = 95/169 (56.21%), Postives = 112/169 (66.27%), Query Frame = 0


Query: 6   GSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHTPSS--KATGSK---RLTTTSKL 65
           GSQ     C P+TTFVQTD  TFREIVQRLTGP+E++  ++  +AT  K   +   TSKL
Sbjct: 5   GSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSKL 64

Query: 66  HERRHLTRPRLQIVKPPPSHFK---ATTSISGEHPSFVKSPVGTPSKILSKLSIGDGEKE 125
           HERR   RP+L+IVKPP S FK    T S    + + + SPVGTPS + S LS+ +GE +
Sbjct: 65  HERRQCMRPKLEIVKPPLS-FKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPD 124

Query: 126 ---LNSIEEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPKNMSG 164
               N  EEEKAIKERRFYLHPSPRS PG   P LL LFPL SP N SG
Sbjct: 125 SCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP-NSSG 171

[Close]

BLAST of Sed0013489 vs. ExPASy Swiss-Prot
Match: Q5M750 (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.6e-11
Identity = 64/188 (34.04%), Postives = 97/188 (51.60%), Query Frame = 0


Query: 18  TTFVQTDATTFREIVQRLTG------------PSESH-------TPSS------KATGSK 77
           TTFVQ D ++F+++VQ LTG            P+ +H       TPSS      KA  +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 78  RLTTTS----KLHERRHLTRPRLQIVKPPPSHFKATTSISGEHPSFVK-SPVGTPSKILS 137
           + +++S    +L+ERR+ +   L+I    P      ++ S   P  +  S +  PS +LS
Sbjct: 117 KQSSSSASGFRLYERRN-SMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLS 176

Query: 138 KLS---------IGDGEKELNSI-EEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLES 166
            ++          G   +  N +  EEKA+KER FYLHPSP + P    P LLPLFP+ S
Sbjct: 177 PVTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTS 236

[Close]

BLAST of Sed0013489 vs. ExPASy Swiss-Prot
Match: Q9FHZ3 (VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-10
Identity = 71/211 (33.65%), Postives = 89/211 (42.18%), Query Frame = 0


Query: 8   QQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHT-------PSSKATGSK-------- 67
           Q  H+     TTFVQ D +TF+++VQ LTG S   T       PS     +K        
Sbjct: 39  QHQHLSNPYPTTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPP 98

Query: 68  -RLTTTSKLHERRH------------------LTRPRLQIVKPPPSH-----FKATTSIS 127
            + T + KL+ERR                       RL       SH     F    S S
Sbjct: 99  IKKTNSFKLYERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSS 158

Query: 128 GEH----PSF-------VKSPV------GTPSKILSKLSIGDGEKELNSIEEEKAIKERR 163
            E+    PS        + SPV        P    S LS+G      NS EE+KAI ++ 
Sbjct: 159 SENILLSPSMLDFPKLGLNSPVTPLRSNDDPFNKSSPLSLG------NSSEEDKAIADKG 218

[Close]

BLAST of Sed0013489 vs. ExPASy Swiss-Prot
Match: Q9M8L3 (VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.6e-09
Identity = 60/157 (38.22%), Postives = 77/157 (49.04%), Query Frame = 0


Query: 16  PLTTFVQTDATTFREIVQRLTG-----PSESHTPSSKATGSKRLTTTS---KLHERRHLT 75
           P T FVQ D + FR IVQ+LTG      S S +  S A     LT      KLHERR  +
Sbjct: 13  PNTMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQSS 72

Query: 76  RP---RLQIVKPPPSHFKATTSISGEHPSFVKSPVGTPSKILSKLSIGDGEKELNS---I 135
           +    ++  +  P   F      S  H  F+ SPV       +++S     +E ++    
Sbjct: 73  KKMELKVNNITNPNDAF------SHFHRGFLVSPVSHLDPFWARVSPHSAREEHHAQPDK 132

Query: 136 EEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESP 159
           EE+KAI E+ FY  PSPRS    A P LLPLFPL SP
Sbjct: 133 EEQKAIAEKGFYFLPSPRSGSEPA-PELLPLFPLRSP 162

[Close]

BLAST of Sed0013489 vs. ExPASy Swiss-Prot
Match: O23660 (VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.0e-07
Identity = 48/161 (29.81%), Postives = 80/161 (49.69%), Query Frame = 0


Query: 18  TTFVQTDATTFREIVQRLTGPSESHT-------------PSSKATGSKRLTTTSKLHERR 77
           TTF++TD ++F+++VQ LTG  ++ T             P  KA  +K+ +++ +L ERR
Sbjct: 36  TTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSERR 95

Query: 78  HLTRPRL----------QIVKPPPSHFKATTSISGEHPSFVKSPVGTPSKILSKLSIGDG 137
           +  +  L          +I+ P   +F A   +S + P  +  P   P       S  D 
Sbjct: 96  NSMKHYLNINPTHSGPPEILTPTILNFPA-LDLSPDTP-LMSDPFYRPGSF--SQSPSDS 155

Query: 138 EKELNSIEEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPL 156
           +   +  ++E++IKE+ FYL PSP + P    P LL LFP+
Sbjct: 156 KPSFDD-DQERSIKEKGFYLRPSPSTTPRDTEPRLLSLFPM 191

[Close]

BLAST of Sed0013489 vs. ExPASy TrEMBL
Match: A0A6J1D5K7 (VQ motif-containing protein 31 OS=Momordica charantia OX=3673 GN=LOC111017822 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.8e-58
Identity = 125/158 (79.11%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 4   EAGSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHTPSSKATG-SKRLTTTSKLHE 63
           E  + QS V C PLTTFVQTD TTFRE+VQRLTGPSESHTP SKA G SKR   TSKLHE
Sbjct: 2   EKAANQSLVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTPPSKAAGSSKRPIATSKLHE 61

Query: 64  RRHLTRPRLQIVKPPPSH-FKATTSISGEHPSFVKSPVGTPSKILSKLSIGDGEKELNSI 123
           RRHLTRP+LQIVKP  SH FK T+ IS EHPS   SP+GTPSKILSKLSIGDGEKELN++
Sbjct: 62  RRHLTRPKLQIVKPAASHFFKPTSCISSEHPSCTSSPLGTPSKILSKLSIGDGEKELNAM 121

Query: 124 EEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPK 160
           EEEKAIKERRFYLHPSPRSMPG A+P LL LFPLESPK
Sbjct: 122 EEEKAIKERRFYLHPSPRSMPGYAQPELLTLFPLESPK 159

[Close]

BLAST of Sed0013489 vs. ExPASy TrEMBL
Match: A0A0A0KZ05 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G448640 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 9.8e-57
Identity = 125/163 (76.69%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 4   EAGSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHTPSSKATGSKRLTTTSKLHER 63
           E G  QSHV C PLTTFVQTD  TFRE+VQRLTGPSESHT SSK  GS+R TTTSKLHER
Sbjct: 2   EKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHER 61

Query: 64  RHL-TRPRLQIVKPPPSHFKATTSISGEHPSFVKSPVGTPSKILSKLSIGDGEK-ELNSI 123
           R L TRP+LQIVKP PSHFKAT    GEHPS++ SP+GTPSKILSKLSIGD EK ELN++
Sbjct: 62  RQLITRPKLQIVKPCPSHFKATI---GEHPSYITSPLGTPSKILSKLSIGDEEKEELNNM 121

Query: 124 EEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPKNMSGN 165
           EEEKAIKERRFYLHPSPRSMP  A+P LL LFPLESPK +S +
Sbjct: 122 EEEKAIKERRFYLHPSPRSMPIYAQPELLSLFPLESPKKVSNH 161

[Close]

BLAST of Sed0013489 vs. ExPASy TrEMBL
Match: A0A6J1HN19 (VQ motif-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111466109 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 6.3e-56
Identity = 122/170 (71.76%), Postives = 137/170 (80.59%), Query Frame = 0


Query: 4   EAGSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHT-PSSKATGSKRLTTTSKLHE 63
           E    Q+ V+C PLTTFVQTD T FRE+VQRLTGPSES+T PSSKATGSKR T+TSKLHE
Sbjct: 26  EKPGTQTPVKCKPLTTFVQTDTTAFREVVQRLTGPSESYTLPSSKATGSKRPTSTSKLHE 85

Query: 64  RRHLTRPRLQIVKPPPSHFKATTSIS--------GEHPSFVKSPVGTPSKILSKLSIGDG 123
           RRHLTRP+LQIVKP  SHFK  + I+         +HPSF+ SPVGTP KI+SKLSIGDG
Sbjct: 86  RRHLTRPKLQIVKPSLSHFKPPSFITSPVGTPPRADHPSFITSPVGTPLKIMSKLSIGDG 145

Query: 124 EKELNSIEEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPKNMSGN 165
           EKELNSIEEE+A +E+RFYLHPSPRSM GSA+P LL LFPLESPK  S N
Sbjct: 146 EKELNSIEEERATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSQN 195

[Close]

BLAST of Sed0013489 vs. ExPASy TrEMBL
Match: A0A5A7TPA5 (VQ motif-containing protein 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00210 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 8.3e-56
Identity = 126/163 (77.30%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 4   EAGSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHTPSSKATGSKRLTTTSKLHER 63
           E G  QSHV C PLTTFVQTD  TFRE+VQRLTGPSESH  SSK  GS+R TTTSKLHER
Sbjct: 2   EKGGSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHMMSSKGVGSRRPTTTSKLHER 61

Query: 64  RHL-TRPRLQIVKPPPSHFKATTSISGEHPSFVKSPVGTPSKILSKLSIGDGEK-ELNSI 123
           RHL TRP+LQIVKP PS+FKATTS   EH S++ SPVGTPSKILSKLSIGD EK ELN+ 
Sbjct: 62  RHLITRPKLQIVKPCPSYFKATTS---EHLSYITSPVGTPSKILSKLSIGDEEKEELNNK 121

Query: 124 EEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPKNMSGN 165
           EEEKAIKERRFYLHPSPRSM   A+P LL LFPLESPKN+S N
Sbjct: 122 EEEKAIKERRFYLHPSPRSMAVYAQPELLSLFPLESPKNVSKN 161

[Close]

BLAST of Sed0013489 vs. ExPASy TrEMBL
Match: A0A6J1EEK6 (VQ motif-containing protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111432521 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.7e-54
Identity = 121/168 (72.02%), Postives = 134/168 (79.76%), Query Frame = 0


Query: 4   EAGSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHT-PSSKATGSKRLTTTSKLHE 63
           E    Q+ V+C PLTTFVQTD T FREIVQRLTGPSES+T PSSKA GSKR T+TSKLHE
Sbjct: 9   EKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRPTSTSKLHE 68

Query: 64  RRHLTRPRLQIVKPPPSHFKATTSIS--------GEHPSFVKSPVGTPSKILSKLSIGDG 123
           RRHLTRP+LQIVKP  SHFK  + I+         +HPSF+ SPVGTPSKI+SKLSIG G
Sbjct: 69  RRHLTRPKLQIVKPSLSHFKPPSFITSPVGTPPRADHPSFITSPVGTPSKIMSKLSIGVG 128

Query: 124 EKELNSIEEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPKNMS 163
           EKELNSIEEEKA +E+RFYLHPSPRSM GSA+P LL LFPLESP   S
Sbjct: 129 EKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPTKTS 176

[Close]

BLAST of Sed0013489 vs. TAIR 10
Match: AT5G08480.2 (VQ motif-containing protein )

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-36
Identity = 95/169 (56.21%), Postives = 112/169 (66.27%), Query Frame = 0


Query: 6   GSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHTPSS--KATGSK---RLTTTSKL 65
           GSQ     C P+TTFVQTD  TFREIVQRLTGP+E++  ++  +AT  K   +   TSKL
Sbjct: 5   GSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSKL 64

Query: 66  HERRHLTRPRLQIVKPPPSHFK---ATTSISGEHPSFVKSPVGTPSKILSKLSIGDGEKE 125
           HERR   RP+L+IVKPP S FK    T S    + + + SPVGTPS + S LS+ +GE +
Sbjct: 65  HERRQCMRPKLEIVKPPLS-FKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPD 124

Query: 126 ---LNSIEEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPKNMSG 164
               N  EEEKAIKERRFYLHPSPRS PG   P LL LFPL SP N SG
Sbjct: 125 SCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP-NSSG 171

[Close]

BLAST of Sed0013489 vs. TAIR 10
Match: AT5G08480.1 (VQ motif-containing protein )

HSP 1 Score: 121.7 bits (304), Expect = 5.5e-28
Identity = 83/163 (50.92%), Postives = 95/163 (58.28%), Query Frame = 0


Query: 6   GSQQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHTPSS--KATGSK---RLTTTSKL 65
           GSQ     C P+TTFVQTD  TFREIVQRLTGP+E++  ++  +AT  K   +   TSKL
Sbjct: 5   GSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSKL 64

Query: 66  HERRHLTRPRLQIVKPPPSHFKATTSISGEHPSFVKSPVGTPSKILSKLSIGDGEKELNS 125
           HERR   RP+L+IVKPP S FK T               G P    + +           
Sbjct: 65  HERRQCMRPKLEIVKPPLS-FKPTE--------------GEPDSCTTNIE---------- 124

Query: 126 IEEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLESPKNMSG 164
            EEEKAIKERRFYLHPSPRS PG   P LL LFPL SP N SG
Sbjct: 125 -EEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP-NSSG 140

[Close]

BLAST of Sed0013489 vs. TAIR 10
Match: AT1G28280.1 (VQ motif-containing protein )

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-12
Identity = 64/188 (34.04%), Postives = 97/188 (51.60%), Query Frame = 0


Query: 18  TTFVQTDATTFREIVQRLTG------------PSESH-------TPSS------KATGSK 77
           TTFVQ D ++F+++VQ LTG            P+ +H       TPSS      KA  +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 78  RLTTTS----KLHERRHLTRPRLQIVKPPPSHFKATTSISGEHPSFVK-SPVGTPSKILS 137
           + +++S    +L+ERR+ +   L+I    P      ++ S   P  +  S +  PS +LS
Sbjct: 117 KQSSSSASGFRLYERRN-SMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLS 176

Query: 138 KLS---------IGDGEKELNSI-EEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLES 166
            ++          G   +  N +  EEKA+KER FYLHPSP + P    P LLPLFP+ S
Sbjct: 177 PVTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTS 236

[Close]

BLAST of Sed0013489 vs. TAIR 10
Match: AT1G28280.2 (VQ motif-containing protein )

HSP 1 Score: 68.6 bits (166), Expect = 5.6e-12
Identity = 62/182 (34.07%), Postives = 92/182 (50.55%), Query Frame = 0


Query: 18  TTFVQTDATTFREIVQRLTG------------PSESH-------TPSS------KATGSK 77
           TTFVQ D ++F+++VQ LTG            P+ +H       TPSS      KA  +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 78  RLTTTS----KLHERRHLTRPRLQIVKPPPSHFKATTSISGEHPSFVK-SPVGTPSKILS 137
           + +++S    +L+ERR+ +   L+I    P      ++ S   P  +  S +  PS +LS
Sbjct: 117 KQSSSSASGFRLYERRN-SMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLS 176

Query: 138 KLS---------IGDGEKELNSI-EEEKAIKERRFYLHPSPRSMPGSARPLLLPLFPLES 160
            ++          G   +  N +  EEKA+KER FYLHPSP + P    P LLPLFP+ S
Sbjct: 177 PVTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTS 236

[Close]

BLAST of Sed0013489 vs. TAIR 10
Match: AT5G53830.1 (VQ motif-containing protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-11
Identity = 71/211 (33.65%), Postives = 89/211 (42.18%), Query Frame = 0


Query: 8   QQSHVRCNPLTTFVQTDATTFREIVQRLTGPSESHT-------PSSKATGSK-------- 67
           Q  H+     TTFVQ D +TF+++VQ LTG S   T       PS     +K        
Sbjct: 39  QHQHLSNPYPTTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPP 98

Query: 68  -RLTTTSKLHERRH------------------LTRPRLQIVKPPPSH-----FKATTSIS 127
            + T + KL+ERR                       RL       SH     F    S S
Sbjct: 99  IKKTNSFKLYERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSS 158

Query: 128 GEH----PSF-------VKSPV------GTPSKILSKLSIGDGEKELNSIEEEKAIKERR 163
            E+    PS        + SPV        P    S LS+G      NS EE+KAI ++ 
Sbjct: 159 SENILLSPSMLDFPKLGLNSPVTPLRSNDDPFNKSSPLSLG------NSSEEDKAIADKG 218

The following BLAST results are available for this feature:

BLAST of Sed0013489 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880928.1	1.4e-57	78.98	VQ motif-containing protein 31 [Benincasa hispida]	[more]
XP_022149395.1	1.4e-57	79.11	VQ motif-containing protein 31 [Momordica charantia]	[more]
XP_031740607.1	2.0e-56	76.69	VQ motif-containing protein 31-like [Cucumis sativus]	[more]
XP_023518304.1	1.0e-55	73.21	VQ motif-containing protein 31 [Cucurbita pepo subsp. pepo]	[more]
XP_022966462.1	1.3e-55	71.76	VQ motif-containing protein 31 [Cucurbita maxima]	[more]

BLAST of Sed0013489 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNP0	4.6e-35	56.21	VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1	[more]
Q5M750	4.6e-11	34.04	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]
Q9FHZ3	2.3e-10	33.65	VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1	[more]
Q9M8L3	5.6e-09	38.22	VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1	[more]
O23660	9.0e-07	29.81	VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1	[more]

BLAST of Sed0013489 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5K7	6.8e-58	79.11	VQ motif-containing protein 31 OS=Momordica charantia OX=3673 GN=LOC111017822 PE...	[more]
A0A0A0KZ05	9.8e-57	76.69	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G448640 PE=4 SV=...	[more]
A0A6J1HN19	6.3e-56	71.76	VQ motif-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111466109 PE=4 ...	[more]
A0A5A7TPA5	8.3e-56	77.30	VQ motif-containing protein 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1EEK6	2.7e-54	72.02	VQ motif-containing protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC11143252...	[more]

BLAST of Sed0013489 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08480.2	3.2e-36	56.21	VQ motif-containing protein	[more]
AT5G08480.1	5.5e-28	50.92	VQ motif-containing protein	[more]
AT1G28280.1	3.3e-12	34.04	VQ motif-containing protein	[more]
AT1G28280.2	5.6e-12	34.07	VQ motif-containing protein	[more]
AT5G53830.1	1.6e-11	33.65	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 111..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..55
None	No IPR available	PANTHER	PTHR33402:SF22	VQ MOTIF-CONTAINING PROTEIN 31	coord: 1..161
IPR008889	VQ	PFAM	PF05678	VQ	coord: 18..40 e-value: 5.1E-10 score: 38.7
IPR039611	VQ motif-containing protein 4/11/13/19/31/33	PANTHER	PTHR33402	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 1..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013489.1	Sed0013489.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus