Sed0013373 (gene) Chayote v1

Overview
NameSed0013373
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRNase H domain-containing protein
LocationLG03: 20304056 .. 20305242 (-)
RNA-Seq ExpressionSed0013373
SyntenySed0013373
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGTGAGTGGAATGTTGATCTGATTAACAACACTTTTTGCCCAGTAGATGTGGATATAATCCTTTCAATTCCTATATGCGCTACCTCCATTGGAGATCGTTGGATTTGGCATTTTTCCAACGATGGCAATTTTTCTGTCAAGAGTGCCTATAAAGTGTTTCTTAATTCCAAGATAGAGGCCTCCTCTTCTTGCACTGAGGTGGAAAAAAGCGAGTGGAAGAAAGTGTGGAGTTTGTAGGTGCCTTCTAAGATAAAGATTTTTCTATGGAGGTTGTATAATAATCTCATCCCCGCTTTCCAGAATCTTTTTAACAGACATATTGTTCAGAATCCTATTTTTCCTATTTGTAAATTTCATTATGAAAATCAGAGACATACCTTTTTTGGTTGTGAGAGAGCTTGTGCTTTATGAGATGTTTTACTTCCTGCTCTGTCCCTCCTAGTTTTTCATGAAGGAGATTTAGAGACAATTTGCTAAGAATTGCTAACTCTTTGTACCTTGGAGATTTTGAAAATTTTTAGTGCTGGTTTATGGTCATTATGGTTTGATAGAAATAAAGCGTTAAACAAAGAAGAAGTCCCAAATGCTGAAATCATAGCAGAATGGGTTTTGAATTACCTTCAAGATTTTCACTCGGTTAACCCTTGTAGTGTTGTTAAGGGGCTTAAATATGGACCTGCTGGTTTTCGTGTGCATGAACATTGGAAGCCTCCAGCGAAGGGAGCTTTAAAGCTAAATGTAGACGTTTCCTGCCATCCTAGCCAAAATCGGGTAGGATTATATGTGATCGTCCAAGACTCCGCTGGGGCTTGTATTGCTGCGAAGTCCAAAGATGTTGATGTTGCACTCGATCCATATGTTGTTGAATCTTTGTCGTTAATCCTTGGACTGCACTTTGTTCTTGAGAGAGGAGTCAATAAAGTTTGGGTCGAATCTGATGCCAAAGGTGTTGTGGAGGCGGTGAACAAGGGGCACACATCAAATTCTGCCCTTGGTGCTCTCTTCTGTGAAGCAAAATCCCTTCTACATAATAATGTCTTTTTAGGTTGTTCGTATGTTCCAAAGGAAGCTAATGTTGCTGCTCATTCTTTGGCCCATTGGGCTTGTAATAATGGTTTATCCATGGACTGGTTTTCTGATTTCCCTCCATGCTTAGAAAACAATATGAGTTTAGTGATGTAA

mRNA sequence

ATGATGATTTTGAAAATTTTTAGTGCTGGTTTATGGTCATTATGGTTTGATAGAAATAAAGCGTTAAACAAAGAAGAAGTCCCAAATGCTGAAATCATAGCAGAATGGGTTTTGAATTACCTTCAAGATTTTCACTCGGTTAACCCTTGTAGTGTTGTTAAGGGGCTTAAATATGGACCTGCTGGTTTTCGTGTGCATGAACATTGGAAGCCTCCAGCGAAGGGAGCTTTAAAGCTAAATGTAGACGTTTCCTGCCATCCTAGCCAAAATCGGGTAGGATTATATGTGATCGTCCAAGACTCCGCTGGGGCTTGTATTGCTGCGAAGTCCAAAGATGTTGATGTTGCACTCGATCCATATGTTGTTGAATCTTTGTCGTTAATCCTTGGACTGCACTTTGTTCTTGAGAGAGGAGTCAATAAAGTTTGGGTCGAATCTGATGCCAAAGGTGTTGTGGAGGCGGTGAACAAGGGGCACACATCAAATTCTGCCCTTGGTGCTCTCTTCTGTGAAGCAAAATCCCTTCTACATAATAATGTCTTTTTAGGTTGTTCGTATGTTCCAAAGGAAGCTAATGTTGCTGCTCATTCTTTGGCCCATTGGGCTTGTAATAATGGTTTATCCATGGACTGGTTTTCTGATTTCCCTCCATGCTTAGAAAACAATATGAGTTTAGTGATGTAA

Coding sequence (CDS)

ATGATGATTTTGAAAATTTTTAGTGCTGGTTTATGGTCATTATGGTTTGATAGAAATAAAGCGTTAAACAAAGAAGAAGTCCCAAATGCTGAAATCATAGCAGAATGGGTTTTGAATTACCTTCAAGATTTTCACTCGGTTAACCCTTGTAGTGTTGTTAAGGGGCTTAAATATGGACCTGCTGGTTTTCGTGTGCATGAACATTGGAAGCCTCCAGCGAAGGGAGCTTTAAAGCTAAATGTAGACGTTTCCTGCCATCCTAGCCAAAATCGGGTAGGATTATATGTGATCGTCCAAGACTCCGCTGGGGCTTGTATTGCTGCGAAGTCCAAAGATGTTGATGTTGCACTCGATCCATATGTTGTTGAATCTTTGTCGTTAATCCTTGGACTGCACTTTGTTCTTGAGAGAGGAGTCAATAAAGTTTGGGTCGAATCTGATGCCAAAGGTGTTGTGGAGGCGGTGAACAAGGGGCACACATCAAATTCTGCCCTTGGTGCTCTCTTCTGTGAAGCAAAATCCCTTCTACATAATAATGTCTTTTTAGGTTGTTCGTATGTTCCAAAGGAAGCTAATGTTGCTGCTCATTCTTTGGCCCATTGGGCTTGTAATAATGGTTTATCCATGGACTGGTTTTCTGATTTCCCTCCATGCTTAGAAAACAATATGAGTTTAGTGATGTAA

Protein sequence

MMILKIFSAGLWSLWFDRNKALNKEEVPNAEIIAEWVLNYLQDFHSVNPCSVVKGLKYGPAGFRVHEHWKPPAKGALKLNVDVSCHPSQNRVGLYVIVQDSAGACIAAKSKDVDVALDPYVVESLSLILGLHFVLERGVNKVWVESDAKGVVEAVNKGHTSNSALGALFCEAKSLLHNNVFLGCSYVPKEANVAAHSLAHWACNNGLSMDWFSDFPPCLENNMSLVM
Homology
BLAST of Sed0013373 vs. NCBI nr
Match: TXG50387.1 (hypothetical protein EZV62_022911 [Acer yangbiense])

HSP 1 Score: 105.5 bits (262), Expect = 6.0e-19
Identity = 59/216 (27.31%), Postives = 105/216 (48.61%), Query Frame = 0

Query: 2   MILKIFSAGLWSLWFDRNKALNKEEVPNAEIIAEWVLNYLQDFHSVNPCSVVKGLKYGPA 61
           ++  +   G W LW +RN  ++      A  +  W+ N+  +F   N  +  + L + P+
Sbjct: 213 VVFNLLIIGYWRLWTNRNSVVHGSAGWAAADMVTWIDNFANEFRLANELNHKEVLSHQPS 272

Query: 62  GFRVHEHWKPPAKGALKLNVDVSCHPSQNRVGLYVIVQDSAGACIAAKSKDVDVALDPYV 121
                  WK P +G  K+N D S      + G+ VI++D  G+ IAA+S  V       +
Sbjct: 273 -------WKTPKRGEFKINCDASFQLRSGKAGVGVIIRDYKGSAIAARSSPVLCCSSVEM 332

Query: 122 VESLSLILGLHFVLERGVNKVWVESDAKGVVEAVNKGHTSNSALGALFCEAKSLLHNNVF 181
           +E+ + + G+H  ++ GV+ V +ESDA  V++ ++      + LGA+   + +L  +   
Sbjct: 333 LEAQACLEGIHLAIDIGVSGVIIESDAASVIQLLSDQTVPRTELGAIIHTSLALGASVNL 392

Query: 182 LGCSYVPKEANVAAHSLAHWACNNGLSMDWFSDFPP 218
           L    V +EAN  AH +A  A +    + WF + PP
Sbjct: 393 LSYVAVRREANSVAHCIAQHALSLDSPVVWFEEMPP 421

BLAST of Sed0013373 vs. NCBI nr
Match: KAF4369322.1 (hypothetical protein F8388_019547 [Cannabis sativa])

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-18
Identity = 63/200 (31.50%), Postives = 98/200 (49.00%), Query Frame = 0

Query: 11  LWSLWFDRNKALNKEEVPNAEIIAEWVLNYLQDFHSVNPCSVVKGLKYGPAGFRVHEHWK 70
           LW +W  RN+ L+ +   NA  + +W  +YL+ +   N       LK      + +  W+
Sbjct: 13  LWKVWHCRNQVLHHKPTQNAPTLIQWTEDYLRQYQQHNDHRAPPNLK---ETRQRNSQWQ 72

Query: 71  PPAKGALKLNVDVSCHPSQNRVGLYVIVQDSAGACIAAKSKDVDVALDPYVVESLSLILG 130
           PP  G +KLNVDV+    QN++    IV++ A   IAA +        P ++E+ +L   
Sbjct: 73  PPPPGCVKLNVDVAQRVQQNKMSFGFIVRNHAEDTIAALAIPWRGIHQPLIMEAHALQFA 132

Query: 131 LHFVLERGVNKVWVESDAKGVVEAVNKGHTSNSALGALFCEAKSLLHNNVFLGCSYVPKE 190
           L + L+  +    +ES  K ++ A++ G+T N  L       K LL +      SY+P+E
Sbjct: 133 LQWCLQNSIAIHHIESSCKILIHAIHLGYTDNIHLQDFITHIKGLLSHLPQASISYIPRE 192

Query: 191 ANVAAHSLAHWACNNGLSMD 211
           AN AAH LA  A   GL  D
Sbjct: 193 ANTAAHRLAKQAL--GLDQD 207

BLAST of Sed0013373 vs. NCBI nr
Match: XP_024178556.2 (uncharacterized protein LOC112184522 [Rosa chinensis])

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-18
Identity = 66/206 (32.04%), Postives = 101/206 (49.03%), Query Frame = 0

Query: 11   LWSLWFDRNKALNKEEVPNAEIIAEWVLNYLQDFHSVNPCSVVKGLKYGPAGFRVHEHWK 70
            LW++W +RN  L ++       I    + + +++  VN  +V    + GP G      W 
Sbjct: 930  LWNIWQNRNDKLWRDCSKTGPSIVASSMAWFEEYSQVNQATVSPD-RRGPTG---QTRWF 989

Query: 71   PPAKGALKLNVDVSCHPSQNRVGLYVIVQDSAGACIAAKSKDVDVALDPYVVESLSLILG 130
            PPA G LKLNVD +   S    G   ++++  G  IAA S   +  L P   E L+L  G
Sbjct: 990  PPATGTLKLNVDGAFLSSIQYGGTGGVLRNDQGDFIAAFSYRAEFVLSPLHAELLALKYG 1049

Query: 131  LHFVLERGVNKVWVESDAKGVVEAVNKGHTSNSALGALFCEAKSLLHNNVFLGCSYVPKE 190
            L F+    V KV VE+D    V+A+N      S LGAL  + K L+     +   + P++
Sbjct: 1050 LDFLHAMNVTKVVVETDCLVAVQAINSSTEDLSELGALIHDIKGLVGVVGDVTVGFTPRQ 1109

Query: 191  ANVAAHSLAHWACNNGLSMDWFSDFP 217
            AN  AH LA ++ ++ + +DWF   P
Sbjct: 1110 ANRVAHRLASYSFDSNIHLDWFGHAP 1131

BLAST of Sed0013373 vs. NCBI nr
Match: XP_035545068.1 (uncharacterized protein LOC118348173 [Juglans regia])

HSP 1 Score: 103.2 bits (256), Expect = 3.0e-18
Identity = 64/217 (29.49%), Postives = 105/217 (48.39%), Query Frame = 0

Query: 7   FSAGLWSLWFDRNKALNKEEVPNAEIIAEWVLNYLQDFHSVNPCSVVKGLKYGPAGFRVH 66
           F A  W LW+ RNK +N + +     +AE V   L+    V+     + LK+        
Sbjct: 248 FFALAWGLWYRRNKFVNDQILLGTASVAESVHVLLRSHAQVSIKIRSEILKF-------- 307

Query: 67  EHWKPPAKGALKLNVDVSCHPSQNRVGLYVIVQDSAGACIAAKSKDVDVALDPYVVESLS 126
             W PP+ G+LKLNVD +  P  ++ G+  +++D  G  + A S+   +      +E L+
Sbjct: 308 YKWNPPSAGSLKLNVDAATFPGWDKAGVGAVLRDEKGRILMAFSRAEILLKGSESLELLA 367

Query: 127 LILGLHFVLERGVNKVWVESDAKGVVEAVNKGHTSNSALGALFCEAKSLLHNNVFLGCSY 186
           +  G+   +  GV+ + VESD+   ++A+N    +NS LG ++ E K L    V    S+
Sbjct: 368 IFRGMQQCVTMGVSHLVVESDSLLSIDALNDDSMTNSLLGVIYYEIKKLASCFVLCLFSH 427

Query: 187 VPKEANVAAHSLAHWACNNGLSMDWFSDFPPCLENNM 224
           V +E N  AH LA  AC       W++  P C+   +
Sbjct: 428 VYREGNRVAHKLARNACKVDSMEVWWNSIPDCISQTV 456

BLAST of Sed0013373 vs. NCBI nr
Match: XP_023907621.1 (uncharacterized protein LOC112019316 [Quercus suber])

HSP 1 Score: 103.2 bits (256), Expect = 3.0e-18
Identity = 60/213 (28.17%), Postives = 105/213 (49.30%), Query Frame = 0

Query: 11  LWSLWFDRNK-ALNKEEVPNAEIIAEWVLNYLQDFHSVNPCSVVKGLKYGPAGFRVHEHW 70
           +W++W+ RN+  +   + P  +++ +     L  F   + CS++          RV   W
Sbjct: 88  MWTIWYRRNQLRVRTVDFPKTQVLQQ-ATQALSTFQQ-SQCSIINNAAVTRPQNRV--QW 147

Query: 71  KPPAKGALKLNVDVSCHPSQNRVGLYVIVQDSAGACIAAKSKDVDVALDPYVVESLSLIL 130
           +PP    +KLN D +  P   + GL V+V D  G  IA+ S+   +   P +VE+++   
Sbjct: 148 RPPPANCVKLNFDGAIFPELGKAGLGVVVHDCHGNAIASLSEQAPLPFAPVIVEAMAAAR 207

Query: 131 GLHFVLERGVNKVWVESDAKGVVEAVNKGHTSNSALGALFCEAKSLLHNNVFLGCSYVPK 190
            + F  E G+ +  +E D+  V+  +     S ++ G L   A S L  + F+ C+++ +
Sbjct: 208 AITFAQELGLQEFMLEGDSVAVINTLQSTEPSLTSYGHLLDSANSTLVTSKFIACTHIRR 267

Query: 191 EANVAAHSLAHWACN-NGLSMDWFSDFPPCLEN 222
           + N  AH+LA  A +  GLSM W  D PP L +
Sbjct: 268 DGNKVAHNLAKHARHVRGLSM-WVEDIPPHLHD 295

BLAST of Sed0013373 vs. ExPASy TrEMBL
Match: A0A5C7H0P0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022911 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.9e-19
Identity = 59/216 (27.31%), Postives = 105/216 (48.61%), Query Frame = 0

Query: 2   MILKIFSAGLWSLWFDRNKALNKEEVPNAEIIAEWVLNYLQDFHSVNPCSVVKGLKYGPA 61
           ++  +   G W LW +RN  ++      A  +  W+ N+  +F   N  +  + L + P+
Sbjct: 213 VVFNLLIIGYWRLWTNRNSVVHGSAGWAAADMVTWIDNFANEFRLANELNHKEVLSHQPS 272

Query: 62  GFRVHEHWKPPAKGALKLNVDVSCHPSQNRVGLYVIVQDSAGACIAAKSKDVDVALDPYV 121
                  WK P +G  K+N D S      + G+ VI++D  G+ IAA+S  V       +
Sbjct: 273 -------WKTPKRGEFKINCDASFQLRSGKAGVGVIIRDYKGSAIAARSSPVLCCSSVEM 332

Query: 122 VESLSLILGLHFVLERGVNKVWVESDAKGVVEAVNKGHTSNSALGALFCEAKSLLHNNVF 181
           +E+ + + G+H  ++ GV+ V +ESDA  V++ ++      + LGA+   + +L  +   
Sbjct: 333 LEAQACLEGIHLAIDIGVSGVIIESDAASVIQLLSDQTVPRTELGAIIHTSLALGASVNL 392

Query: 182 LGCSYVPKEANVAAHSLAHWACNNGLSMDWFSDFPP 218
           L    V +EAN  AH +A  A +    + WF + PP
Sbjct: 393 LSYVAVRREANSVAHCIAQHALSLDSPVVWFEEMPP 421

BLAST of Sed0013373 vs. ExPASy TrEMBL
Match: A0A7J6FF49 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_019547 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-18
Identity = 63/200 (31.50%), Postives = 98/200 (49.00%), Query Frame = 0

Query: 11  LWSLWFDRNKALNKEEVPNAEIIAEWVLNYLQDFHSVNPCSVVKGLKYGPAGFRVHEHWK 70
           LW +W  RN+ L+ +   NA  + +W  +YL+ +   N       LK      + +  W+
Sbjct: 13  LWKVWHCRNQVLHHKPTQNAPTLIQWTEDYLRQYQQHNDHRAPPNLK---ETRQRNSQWQ 72

Query: 71  PPAKGALKLNVDVSCHPSQNRVGLYVIVQDSAGACIAAKSKDVDVALDPYVVESLSLILG 130
           PP  G +KLNVDV+    QN++    IV++ A   IAA +        P ++E+ +L   
Sbjct: 73  PPPPGCVKLNVDVAQRVQQNKMSFGFIVRNHAEDTIAALAIPWRGIHQPLIMEAHALQFA 132

Query: 131 LHFVLERGVNKVWVESDAKGVVEAVNKGHTSNSALGALFCEAKSLLHNNVFLGCSYVPKE 190
           L + L+  +    +ES  K ++ A++ G+T N  L       K LL +      SY+P+E
Sbjct: 133 LQWCLQNSIAIHHIESSCKILIHAIHLGYTDNIHLQDFITHIKGLLSHLPQASISYIPRE 192

Query: 191 ANVAAHSLAHWACNNGLSMD 211
           AN AAH LA  A   GL  D
Sbjct: 193 ANTAAHRLAKQAL--GLDQD 207

BLAST of Sed0013373 vs. ExPASy TrEMBL
Match: A0A6P9EME2 (uncharacterized protein LOC118348173 OS=Juglans regia OX=51240 GN=LOC118348173 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-18
Identity = 64/217 (29.49%), Postives = 105/217 (48.39%), Query Frame = 0

Query: 7   FSAGLWSLWFDRNKALNKEEVPNAEIIAEWVLNYLQDFHSVNPCSVVKGLKYGPAGFRVH 66
           F A  W LW+ RNK +N + +     +AE V   L+    V+     + LK+        
Sbjct: 248 FFALAWGLWYRRNKFVNDQILLGTASVAESVHVLLRSHAQVSIKIRSEILKF-------- 307

Query: 67  EHWKPPAKGALKLNVDVSCHPSQNRVGLYVIVQDSAGACIAAKSKDVDVALDPYVVESLS 126
             W PP+ G+LKLNVD +  P  ++ G+  +++D  G  + A S+   +      +E L+
Sbjct: 308 YKWNPPSAGSLKLNVDAATFPGWDKAGVGAVLRDEKGRILMAFSRAEILLKGSESLELLA 367

Query: 127 LILGLHFVLERGVNKVWVESDAKGVVEAVNKGHTSNSALGALFCEAKSLLHNNVFLGCSY 186
           +  G+   +  GV+ + VESD+   ++A+N    +NS LG ++ E K L    V    S+
Sbjct: 368 IFRGMQQCVTMGVSHLVVESDSLLSIDALNDDSMTNSLLGVIYYEIKKLASCFVLCLFSH 427

Query: 187 VPKEANVAAHSLAHWACNNGLSMDWFSDFPPCLENNM 224
           V +E N  AH LA  AC       W++  P C+   +
Sbjct: 428 VYREGNRVAHKLARNACKVDSMEVWWNSIPDCISQTV 456

BLAST of Sed0013373 vs. ExPASy TrEMBL
Match: A0A803P5E3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-18
Identity = 68/229 (29.69%), Postives = 116/229 (50.66%), Query Frame = 0

Query: 4   LKIFSAGLWSLWFDRNKALNKEEVPNAEIIAEWVLNYLQDFHSVNPCSVVKGL--KYGPA 63
           L+ F+  LWSLW  RNK  +  +    E++    ++YL++FHS     + KGL   +  A
Sbjct: 155 LEQFACILWSLWTKRNKERHGTKPHLIELLLFKAISYLEEFHS---ACMPKGLAITHQQA 214

Query: 64  GFRVHE---HWKPPAKGALKLNVDVSCHPSQNRVGLYVIVQDSAGACIAAKSKDVDVALD 123
           G + ++    W  P  G LKLN + S + ++   G   I+Q+S+G CIAA S+       
Sbjct: 215 GLQSNQPSPKWLNPPSGRLKLNTNASVNKAKQIYGFGAILQNSSGDCIAAMSRPFPDCFK 274

Query: 124 PYVVESLSLILGLHFVLERGVNKVWVESDAKGVVEAVNKGHTSNSALGALFCEAKSLLHN 183
           P ++E L+LI  L ++ +  +   ++ESD+  V+  +   H S S    L  +    + N
Sbjct: 275 PEIIEVLALIHILQWIKDLQLPVDYIESDSLVVINGLQSQHASFSDFHCLLIDILLSVFN 334

Query: 184 NVFLGCSYVPKEANVAAHSLAHWACNNGLSMDWFSDFPPCLENNMSLVM 228
              +  ++V + AN   H+LA++A +      W  + PP L   MS+V+
Sbjct: 335 FPGVQITHVKRCANTVTHTLANYALSVSTDCLWLEELPPPL---MSIVL 377

BLAST of Sed0013373 vs. ExPASy TrEMBL
Match: A0A2Z6NP61 (RNase H domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_215080 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.5e-18
Identity = 61/216 (28.24%), Postives = 101/216 (46.76%), Query Frame = 0

Query: 5   KIFSAGLWSLWFDRNKALNKEEVPNAEIIAEWVLNYLQDFHSVNPCSVVKGLKYGPAGFR 64
           + FS   WS+W  RN  +        + + +   + +  + +      V+ L   P    
Sbjct: 29  EFFSVMAWSIWKCRNNHVWNNIFDTIQTVCKRANHLITGWRNAQQ---VRALADNPQHTS 88

Query: 65  VHEHWKPPAKGALKLNVDVSCHPSQNRVGLYVIVQDSAGACIAAKSKDVDVALDPYVVES 124
               W  P  G  KLNVD S     N+VG+ + ++D  G  + AK++ ++  LD  + E+
Sbjct: 89  QQVEWTKPINGRYKLNVDASFSHLYNKVGIGMCIRDDQGCFVKAKTEWIEPILDVEIGEA 148

Query: 125 LSLILGLHFVLERGVNKVWVESDAKGVVEAVNKGHTSNSALGALFCEAKSLLHNN-VFLG 184
           + L+  L ++ E  ++   VE D K VV+ +N     NS  GA+  + +SLL  N V   
Sbjct: 149 MGLLRALKWIDELQLHNTDVEVDCKRVVDGLNSKRNINSDFGAILSDCRSLLATNLVNSN 208

Query: 185 CSYVPKEANVAAHSLAHWACNNGLSMDWFSDFPPCL 220
             ++ ++AN  AHSLA W   +  S   F D P C+
Sbjct: 209 VKFIRRQANEVAHSLA-WVATSSASFQNFIDIPTCI 240

BLAST of Sed0013373 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-08
Identity = 45/197 (22.84%), Postives = 79/197 (40.10%), Query Frame = 0

Query: 11  LWSLWFDRNKALNKEEVPNAEIIA--------EWVLNYLQDFHSVNPCSVVKGLKYGPAG 70
           +W LW  RN  L +++  + +  A        EW LN  +   + N       ++     
Sbjct: 144 MWRLWKSRNVFLFQQKCQSPDYEARKGIQDATEW-LNANETTENTNVHVATNPIQ---TS 203

Query: 71  FRVHEHWKPPAKGALKLNVDVSCHPSQNRVGLYVIVQDSAGACIAAKSKDVDVALDPYVV 130
            R    W PP +G +K N D               +++  G  +   +  +  +      
Sbjct: 204 RRDSSQWNPPPEGWVKCNFDSGYTQGSPYTRSGWTIRECNGHIVLCGNAKLQSSTCSLHA 263

Query: 131 ESLSLILGLHFVLERGVNKVWVESDAKGVVEAVNKGHTSNSALGALFCEAKSLLHNNVFL 190
           E+L  +  L  +   G+  VW ESD+K +V  +N G   +S LG L  + +  +    + 
Sbjct: 264 EALGFLHALQVIWAHGLRYVWFESDSKSLVTLINNGE-DHSLLGTLIYDIRHWMLKLPYC 323

Query: 191 GCSYVPKEANVAAHSLA 200
              +V +E N AA +LA
Sbjct: 324 SLEFVNRERNSAADALA 335

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TXG50387.16.0e-1927.31hypothetical protein EZV62_022911 [Acer yangbiense][more]
KAF4369322.12.3e-1831.50hypothetical protein F8388_019547 [Cannabis sativa][more]
XP_024178556.22.3e-1832.04uncharacterized protein LOC112184522 [Rosa chinensis][more]
XP_035545068.13.0e-1829.49uncharacterized protein LOC118348173 [Juglans regia][more]
XP_023907621.13.0e-1828.17uncharacterized protein LOC112019316 [Quercus suber][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5C7H0P02.9e-1927.31Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022911 PE=4 SV=1[more]
A0A7J6FF491.1e-1831.50RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_019547 PE=... [more]
A0A6P9EME21.4e-1829.49uncharacterized protein LOC118348173 OS=Juglans regia OX=51240 GN=LOC118348173 P... [more]
A0A803P5E31.9e-1829.69Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2Z6NP615.5e-1828.24RNase H domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_2150... [more]
Match NameE-valueIdentityDescription
AT2G02650.11.0e-0822.84Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 80..202
e-value: 7.2E-18
score: 64.6
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 76..207
e-value: 1.2E-12
score: 49.9
NoneNo IPR availablePANTHERPTHR47723OS05G0353850 PROTEINcoord: 67..217
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 79..200
e-value: 4.38317E-19
score: 77.7396
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 76..204

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0013373.1Sed0013373.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity