Sed0013319 (gene) Chayote v1

Overview


Name	Sed0013319
Type	gene
Organism	Sechium edule (Chayote v1)
Description	large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like
Location	LG07: 2326604 .. 2330524 (-)
RNA-Seq Expression	Sed0013319
Synteny	Sed0013319

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTATTAAAAGGTAAACAAATAACCCTATCTTCTCTGCACAGTCCGCTCTCTCACACATCTCTTTCTCAGCCTCTTCATCTCTTTCTCTGCTGCTCTGTTTTTTTTTTGTGGACAAAATCTGTGTTTTCAAAGAACGAATGAAGTTCTTTGAAACCTATTTTCTCTGCTATTCAACTTCGACGACTCTTAGATGCTAAAAAAGGTATGAATTTTTCTTAATCGTTCCGATAAGCAGGTGAATCGTTCTTTTTCACTCTGAAAACGTCCGATTCGGGCTATTTGCAATTCAAAATTATGATGTGAATCGATTTCTACGAATCACACGTTTTTTATAATCTTGATTATAACATAGATTATCATAAACAATGTTCCAGATAAATAGATATGTAGGTTTAGATAAATGGACACTCAAGTTTAGGAACCGTTTGATAGCCAACCATTTGGGCTCGTTTGATAATCATTTAGTTTTTGTTTATGAAATTTAAACCTATTTCTATTCAAATTCATATAATGTGCTCCATCTTTCCTACAATGTATCCATCTTTTTTTAGGAAAGTAGGAGAATACTAACTAAATTTAAAAAACATAAACAAGTTTTGGGAAACTACTTTTTTTGTTTACAAATTTTGGTTTTGTTTATTAAAATATAAGTAAGATGTAGATATCCAAATAAAGAAAAAGGTATAGTAAGTTAGTTTTTGTAGGCTTAAATTTCATAAACAAAAAAACGAAAAAAAAAATGGTTATCAAACGGGGTATTGGTTATTTGTTTTTTGTTTATGAAATTTAAGACTATTTCTAGTATCCATCTTTCCTTAAGAAAGTAGGTGAAATCTAATCAAATTCTAAAAATAAAAATAAGTTGTTGGAAGCTACTTTTTTTTGTTTCCAAATTTTGATTTTATTTATTAAAATATAGGTAAGATGTAGATATCCAAATAAGAAAAAAGCTAGGATAAGGTAGTTGTTGCAGGCTTAAATTTCAAAAACAATAAACGAAAAATAAAATAGTTAGGCTCCATTTGATAACCATTTTGTTTTTCGTTTTTCGTTTATGAAATTTAAGCCTACAACAACTGTCTTGCTATCCTTTTTTCCTTATTTGAATATCTACATCTTACCTATATTTTAATAAACAAAACCAAAATTTGTAAACAAAAAAAGTAGCTTCCAAAAACTTGTTTATGTTTTTAAAATTTGGTTAGTATTCTCCTACTTTCTTAAGAAAAGATGGATACATTGTAGGGAAGATTAAGAAATTTGAATATAAATAGACTTAAATTTCATAAACAAAAAACAAAAAACAAAATGGTTATCAAACGGGACCTAATCAAACAGGGTCTTAGTTAACCACGGACAAACATCGATTGGGTTATTATAACAAATCCGGCCATTTACATAAATGGGAGTCCAAACACACCCTAAATGTTGTACCGTTGTTAATATGTGCTGTGATAATAGTCCTGTGCGAGCAAGCTGACCCGGAAACTTGTGGATGTAAAAAAAAAAAAAATTGTGACCTAGTTCTCCAATGCTCTTGTAGGATGGGATTGTTTTCGCTCGAATCCATTAATTGACTAGTTTATATAATTTGCAGAGCCAGTGTTATTTGTATCTGAAAAATTCCTTATACAATTTTAATTGCAGTATTATTTAAGATGCCAGCTACATTTCCCATATCATCCATACTTTCATCTTCTCATTCCAATGGAGTTATTAAGATTTGCTGCTTGAAATCCAAAGGGAATGCTTCTTTCAATCCACATTTCTGCTTTGTTGATTGTAAAGTTCCATGGACATTGAAGAAAGATGTTAAGCCAAGGTTGGGACGTGACCCATATTTTGTGCTGAAATCTACTTCCCTGAATTGTGTGAAACCTACTTATCAGTCATTTTTTGAAGACAAGACAATAATTACTGATTGGGATGGTCAAGAAGGGGACATTGAAGAGATGGGTTCACCTTGGGAAGGAGCAGTTGTTTACAGGAGGAACACTTCAGTTTCTCATGTGGAGTATTGCACTACATTAGAGAGGCTTGGATTGGAAAAGCTTTCGACTGATGTCTCGAAATCTAGAGCGTCGAAGATGGGACTTCGCATAACGAAGACTGTGAAGGATTATCCCTCTGGAACCCCGGTTCAAATCTCTGTTGACGTTACAAGGAAAGAAAAAAAGTTGAGGCTTGATGGGATTGTCAAAACTGTCATCACTCTCAATTGTTATAGGTATATATCCTACTTGCCAATTATTTGTTTGCTTTCAATCAACTCTAACATACCATATTATAAACTATAATGCTAAACCATTTTGGCTCTCTCACAAGTGATTTTAGTGAACAAAAAAGTTTCTTCCATTCTAAGTGTTACATGAGTTTTCAACGCACAACTCAACTGGTTACAACATTATACTCTCAACCAAAAGGTTAGAGGTTCAAATTCTTACCCCACGTGTTGAGCTAAAATAAAATAAATGGTTTTAGATAGGTTTTCTCAACGTTTGTAACCTCCATCCATAGCTGATTGTTCGTTGGATGGTTACTCAATCTGCACCTTTTTCTTTTTTTCCTTGTTTAGAAAATAACTATATTACCTACTCCTACTCATTACTCAACTTTGCATTAGATTCCCTTCTATTTGATTTCATCAATTTTGACTTTTCAATTACAATCCTAGATGTAACGACTTTACTTGAACATGATCAGTTTGATAGGTTTATAAAGTTCTCAAGGGGCGGCACAGTTGGACGAAGGCTCGGGTTTTGAGGGTATGCTCCCCTTGAGGTCTCGGGATTGAGACACGTTTCTTACATTAATTTGTAGACATCTTCCAACTTTGTCTCTGTTCCTGCCACAGTTTAGAAATAGGTCTGTGGTATGCTTGATATGTGGGAGCGAAACTCCAACTCCTAGTCATAAAGAAAAGGTTTACTAGCCTAGTTGTCACTTCTGTCGTGTTGAACTGGGATGAACTATGGAGTATTTTCTTTCTCTGATTTTTCTTCTTACTCCTCCAGTCCTCCACATCAATTGGCTTCTTTGTTTAGCACGTACATGTTGTTTATCATGGAAAAAAGGGGAAATAGGATAATCCAGTAAATACAATGAAGGTAGGTGATAGGAATATTTTGGCAATTTGGTCACCTCTAATTACATGGTTATCTTGTAATTTTCTTTACTTTTTAATATTTCAATATATCGGGATCTTACCAGTAGTCTCATAAATTTGTCCTGTATCATTTATGCGATTGTTATTGACGTTTTAGCATGTTAATCACCTATGTTGCAGGTGTTGTGAACCAGCTCCTGAATGCATTTTCTCAAATTTCTCAATTATACTAAGCGAAGAACCGATTGAAGAACCCGAGGTCATAAATATGGGAATCATCAGCGGGCAGGATATATTCAAAACATATGATGGGAATAGTGATGAAGATGATGAAGAGTTGATTGATTTGGATGATCAACTCTATTTTCCTCTTGTGGAGAAAGAAATAGATATATCAAAGAACATAAGAGACATCTTGCATCTAGAAATTACTCTGAATGCGATATGCGATCCGGGATGCCAAGGTATGTGTCTGAAATGTGGTATAAATTTGAATACTGGAAGCTGTAACTGTAGTAAGCAGGATGTAAAGAAGAACAATTTTGGTCCTCTAGGAAACTTGAAAAGGCAAATGCAGAATAATTCTTAATAGTTGAATGCAGAACATGTGTTCTATTTCATCAAACACTTTCTTTCTAACAACTTTCCCTTATCTTTCTCTTAGCTGAGCCCTTCACCAACCATCCTTTTTGTAACTTATTCCCTTTTTGTTTTAATCTTTGTCAAGTTAGAGCATATGCAATTCTGAAAAAAATGTCTATTATTACTCTGCTCATTTTGGCTGAAGCCCAATCTACAATTTCTAATGGCAG

mRNA sequence

ATTTTATTAAAAGGTAAACAAATAACCCTATCTTCTCTGCACAGTCCGCTCTCTCACACATCTCTTTCTCAGCCTCTTCATCTCTTTCTCTGCTGCTCTGTTTTTTTTTTGTGGACAAAATCTGTGTTTTCAAAGAACGAATGAAGTTCTTTGAAACCTATTTTCTCTGCTATTCAACTTCGACGACTCTTAGATGCTAAAAAAGTATTATTTAAGATGCCAGCTACATTTCCCATATCATCCATACTTTCATCTTCTCATTCCAATGGAGTTATTAAGATTTGCTGCTTGAAATCCAAAGGGAATGCTTCTTTCAATCCACATTTCTGCTTTGTTGATTGTAAAGTTCCATGGACATTGAAGAAAGATGTTAAGCCAAGGTTGGGACGTGACCCATATTTTGTGCTGAAATCTACTTCCCTGAATTGTGTGAAACCTACTTATCAGTCATTTTTTGAAGACAAGACAATAATTACTGATTGGGATGGTCAAGAAGGGGACATTGAAGAGATGGGTTCACCTTGGGAAGGAGCAGTTGTTTACAGGAGGAACACTTCAGTTTCTCATGTGGAGTATTGCACTACATTAGAGAGGCTTGGATTGGAAAAGCTTTCGACTGATGTCTCGAAATCTAGAGCGTCGAAGATGGGACTTCGCATAACGAAGACTGTGAAGGATTATCCCTCTGGAACCCCGGTTCAAATCTCTGTTGACGTTACAAGGAAAGAAAAAAAGTTGAGGCTTGATGGGATTGTCAAAACTGTCATCACTCTCAATTGTTATAGGTGTTGTGAACCAGCTCCTGAATGCATTTTCTCAAATTTCTCAATTATACTAAGCGAAGAACCGATTGAAGAACCCGAGGTCATAAATATGGGAATCATCAGCGGGCAGGATATATTCAAAACATATGATGGGAATAGTGATGAAGATGATGAAGAGTTGATTGATTTGGATGATCAACTCTATTTTCCTCTTGTGGAGAAAGAAATAGATATATCAAAGAACATAAGAGACATCTTGCATCTAGAAATTACTCTGAATGCGATATGCGATCCGGGATGCCAAGGTATGTGTCTGAAATGTGGTATAAATTTGAATACTGGAAGCTGTAACTGTAGTAAGCAGGATGTAAAGAAGAACAATTTTGGTCCTCTAGGAAACTTGAAAAGGCAAATGCAGAATAATTCTTAATAGTTGAATGCAGAACATGTGTTCTATTTCATCAAACACTTTCTTTCTAACAACTTTCCCTTATCTTTCTCTTAGCTGAGCCCTTCACCAACCATCCTTTTTGTAACTTATTCCCTTTTTGTTTTAATCTTTGTCAAGTTAGAGCATATGCAATTCTGAAAAAAATGTCTATTATTACTCTGCTCATTTTGGCTGAAGCCCAATCTACAATTTCTAATGGCAG

Coding sequence (CDS)

ATGCCAGCTACATTTCCCATATCATCCATACTTTCATCTTCTCATTCCAATGGAGTTATTAAGATTTGCTGCTTGAAATCCAAAGGGAATGCTTCTTTCAATCCACATTTCTGCTTTGTTGATTGTAAAGTTCCATGGACATTGAAGAAAGATGTTAAGCCAAGGTTGGGACGTGACCCATATTTTGTGCTGAAATCTACTTCCCTGAATTGTGTGAAACCTACTTATCAGTCATTTTTTGAAGACAAGACAATAATTACTGATTGGGATGGTCAAGAAGGGGACATTGAAGAGATGGGTTCACCTTGGGAAGGAGCAGTTGTTTACAGGAGGAACACTTCAGTTTCTCATGTGGAGTATTGCACTACATTAGAGAGGCTTGGATTGGAAAAGCTTTCGACTGATGTCTCGAAATCTAGAGCGTCGAAGATGGGACTTCGCATAACGAAGACTGTGAAGGATTATCCCTCTGGAACCCCGGTTCAAATCTCTGTTGACGTTACAAGGAAAGAAAAAAAGTTGAGGCTTGATGGGATTGTCAAAACTGTCATCACTCTCAATTGTTATAGGTGTTGTGAACCAGCTCCTGAATGCATTTTCTCAAATTTCTCAATTATACTAAGCGAAGAACCGATTGAAGAACCCGAGGTCATAAATATGGGAATCATCAGCGGGCAGGATATATTCAAAACATATGATGGGAATAGTGATGAAGATGATGAAGAGTTGATTGATTTGGATGATCAACTCTATTTTCCTCTTGTGGAGAAAGAAATAGATATATCAAAGAACATAAGAGACATCTTGCATCTAGAAATTACTCTGAATGCGATATGCGATCCGGGATGCCAAGGTATGTGTCTGAAATGTGGTATAAATTTGAATACTGGAAGCTGTAACTGTAGTAAGCAGGATGTAAAGAAGAACAATTTTGGTCCTCTAGGAAACTTGAAAAGGCAAATGCAGAATAATTCTTAA

Protein sequence

MPATFPISSILSSSHSNGVIKICCLKSKGNASFNPHFCFVDCKVPWTLKKDVKPRLGRDPYFVLKSTSLNCVKPTYQSFFEDKTIITDWDGQEGDIEEMGSPWEGAVVYRRNTSVSHVEYCTTLERLGLEKLSTDVSKSRASKMGLRITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSIILSEEPIEEPEVINMGIISGQDIFKTYDGNSDEDDEELIDLDDQLYFPLVEKEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLNTGSCNCSKQDVKKNNFGPLGNLKRQMQNNS

Homology

[Close]

BLAST of Sed0013319 vs. NCBI nr
Match: XP_038897008.1 (large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 537.7 bits (1384), Expect = 6.8e-149
Identity = 265/325 (81.54%), Postives = 291/325 (89.54%), Query Frame = 0


Query: 1   MPATFPISSILSSSHSNGVIKICCLKSKGNASFNPHFCFVDCKVPWTLKKDVKPRLGRDP 60
           M ATFP SS++SSSHSN  IK+  LKSKGN SF+ H     C+VPW   ++++P LG D 
Sbjct: 1   MSATFPTSSVVSSSHSNEFIKVFYLKSKGNVSFDSH-----CRVPWKFMRNIQPSLG-DS 60

Query: 61  YFVLKSTSLNCVKPTYQSFFEDKTIITDWDGQEGDIEEMGSPWEGAVVYRRNTSVSHVEY 120
             +LKSTS+ CVKPTYQS FED +IITDW+  +GDIEEMGSPWEGAV+Y+RN+SVSHVEY
Sbjct: 61  CIMLKSTSIKCVKPTYQSLFEDNSIITDWE-DKGDIEEMGSPWEGAVIYKRNSSVSHVEY 120

Query: 121 CTTLERLGLEKLSTDVSKSRASKMGLRITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIV 180
           CTTLERLGLEKLSTDVSKSRAS MGLR+ K VKDYP GTPVQISVDVTRKEKKLRLDGIV
Sbjct: 121 CTTLERLGLEKLSTDVSKSRASAMGLRVRKVVKDYPFGTPVQISVDVTRKEKKLRLDGIV 180

Query: 181 KTVITLNCYRCCEPAPECIFSNFSIILSEEPIEEPEVINMGIISGQDIFKTYDGNSDEDD 240
           KTVITLNCYRCCE APECIFSNFSIILSEEPIEEP+VINMGIISGQD+FKTYDGNSDEDD
Sbjct: 181 KTVITLNCYRCCELAPECIFSNFSIILSEEPIEEPDVINMGIISGQDMFKTYDGNSDEDD 240

Query: 241 EELIDLDDQLYFPLVEKEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLNTGSCN 300
           EEL+DLDDQLYFPL+EKEIDISKNIRDILHLEIT+NAICDPGC+GMCL CGINLNTGSCN
Sbjct: 241 EELVDLDDQLYFPLIEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCN 300

Query: 301 CSKQDVKKNNFGPLGNLKRQMQNNS 326
           CSKQ VKKN+FGPLGNLK+QMQ NS
Sbjct: 301 CSKQAVKKNDFGPLGNLKKQMQKNS 318

[Close]

BLAST of Sed0013319 vs. NCBI nr
Match: KAA0067976.1 (uncharacterized protein E6C27_scaffold138G001640 [Cucumis melo var. makuwa])

HSP 1 Score: 531.6 bits (1368), Expect = 4.9e-147
Identity = 261/325 (80.31%), Postives = 287/325 (88.31%), Query Frame = 0


Query: 1   MPATFPISSILSSSHSNGVIKICCLKSKGNASFNPHFCFVDCKVPWTLKKDVKPRLGRDP 60
           M ATFP SS++SSSHS   I +   KSKGN SFN HF     +VPW   ++++P LG DP
Sbjct: 70  MLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSHF-----RVPWRFMRNIQPSLG-DP 129

Query: 61  YFVLKSTSLNCVKPTYQSFFEDKTIITDWDGQEGDIEEMGSPWEGAVVYRRNTSVSHVEY 120
              +KSTS+ CVKPTYQS FED +IITDW  QEGDIEEMGSPWEGAV+Y+RN+SVSHVEY
Sbjct: 130 CIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEY 189

Query: 121 CTTLERLGLEKLSTDVSKSRASKMGLRITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIV 180
           CTTLERLGLEKLSTDVSKSRAS MGLR+TK VKDYP GTPVQISVDVTRK+KKLRLDGIV
Sbjct: 190 CTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIV 249

Query: 181 KTVITLNCYRCCEPAPECIFSNFSIILSEEPIEEPEVINMGIISGQDIFKTYDGNSDEDD 240
           KTVITLNCYRCCEPAPECIFSNFSI+LSEEPIEEP+VINMGIISGQDIFKT +GNSDEDD
Sbjct: 250 KTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDD 309

Query: 241 EELIDLDDQLYFPLVEKEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLNTGSCN 300
           EE +DLDDQLYFP V+KEIDISKNIRDILHLEIT+N IC+PGC+GMCL CGINLNTGSCN
Sbjct: 310 EESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCN 369

Query: 301 CSKQDVKKNNFGPLGNLKRQMQNNS 326
           CSKQ VKKN+FGPLGNLKR+MQNNS
Sbjct: 370 CSKQAVKKNDFGPLGNLKRRMQNNS 388

[Close]

BLAST of Sed0013319 vs. NCBI nr
Match: XP_008451552.1 (PREDICTED: uncharacterized protein LOC103492797 isoform X2 [Cucumis melo])

HSP 1 Score: 527.7 bits (1358), Expect = 7.0e-146
Identity = 259/325 (79.69%), Postives = 286/325 (88.00%), Query Frame = 0


Query: 1   MPATFPISSILSSSHSNGVIKICCLKSKGNASFNPHFCFVDCKVPWTLKKDVKPRLGRDP 60
           M ATFP SS++SSSHS   I +   +SKGN SFN HF     +VPW   ++++P LG DP
Sbjct: 53  MLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSHF-----RVPWRFMRNIQPSLG-DP 112

Query: 61  YFVLKSTSLNCVKPTYQSFFEDKTIITDWDGQEGDIEEMGSPWEGAVVYRRNTSVSHVEY 120
              +KSTS+ CVKPTYQS FED +IITDW  QEGDIEEM SPWEGAV+Y+RN+SVSHVEY
Sbjct: 113 CIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEY 172

Query: 121 CTTLERLGLEKLSTDVSKSRASKMGLRITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIV 180
           CTTLERLGLEKLSTDVSKSRAS MGLR+TK VKDYP GTPVQISVDVTRK+KKLRLDGIV
Sbjct: 173 CTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIV 232

Query: 181 KTVITLNCYRCCEPAPECIFSNFSIILSEEPIEEPEVINMGIISGQDIFKTYDGNSDEDD 240
           KTVITLNCYRCCEPAPECIFSNFSI+LSEEPIEEP+VINMGIISGQDIFKT +GNSDEDD
Sbjct: 233 KTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDD 292

Query: 241 EELIDLDDQLYFPLVEKEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLNTGSCN 300
           EE +DLDDQLYFP V+KEIDISKNIRDILHLEIT+N IC+PGC+GMCL CGINLNTGSCN
Sbjct: 293 EESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCN 352

Query: 301 CSKQDVKKNNFGPLGNLKRQMQNNS 326
           CSKQ VKKN+FGPLGNLKR+MQNNS
Sbjct: 353 CSKQAVKKNDFGPLGNLKRRMQNNS 371

[Close]

BLAST of Sed0013319 vs. NCBI nr
Match: XP_008451550.1 (PREDICTED: uncharacterized protein LOC103492797 isoform X1 [Cucumis melo])

HSP 1 Score: 527.7 bits (1358), Expect = 7.0e-146
Identity = 259/325 (79.69%), Postives = 286/325 (88.00%), Query Frame = 0


Query: 1   MPATFPISSILSSSHSNGVIKICCLKSKGNASFNPHFCFVDCKVPWTLKKDVKPRLGRDP 60
           M ATFP SS++SSSHS   I +   +SKGN SFN HF     +VPW   ++++P LG DP
Sbjct: 70  MLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSHF-----RVPWRFMRNIQPSLG-DP 129

Query: 61  YFVLKSTSLNCVKPTYQSFFEDKTIITDWDGQEGDIEEMGSPWEGAVVYRRNTSVSHVEY 120
              +KSTS+ CVKPTYQS FED +IITDW  QEGDIEEM SPWEGAV+Y+RN+SVSHVEY
Sbjct: 130 CIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEY 189

Query: 121 CTTLERLGLEKLSTDVSKSRASKMGLRITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIV 180
           CTTLERLGLEKLSTDVSKSRAS MGLR+TK VKDYP GTPVQISVDVTRK+KKLRLDGIV
Sbjct: 190 CTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIV 249

Query: 181 KTVITLNCYRCCEPAPECIFSNFSIILSEEPIEEPEVINMGIISGQDIFKTYDGNSDEDD 240
           KTVITLNCYRCCEPAPECIFSNFSI+LSEEPIEEP+VINMGIISGQDIFKT +GNSDEDD
Sbjct: 250 KTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDD 309

Query: 241 EELIDLDDQLYFPLVEKEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLNTGSCN 300
           EE +DLDDQLYFP V+KEIDISKNIRDILHLEIT+N IC+PGC+GMCL CGINLNTGSCN
Sbjct: 310 EESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCN 369

Query: 301 CSKQDVKKNNFGPLGNLKRQMQNNS 326
           CSKQ VKKN+FGPLGNLKR+MQNNS
Sbjct: 370 CSKQAVKKNDFGPLGNLKRRMQNNS 388

[Close]

BLAST of Sed0013319 vs. NCBI nr
Match: TYK18147.1 (uncharacterized protein E5676_scaffold411G00780 [Cucumis melo var. makuwa])

HSP 1 Score: 523.5 bits (1347), Expect = 1.3e-144
Identity = 258/325 (79.38%), Postives = 284/325 (87.38%), Query Frame = 0


Query: 1   MPATFPISSILSSSHSNGVIKICCLKSKGNASFNPHFCFVDCKVPWTLKKDVKPRLGRDP 60
           M ATFP SS++SSSHS   I +   KSKGN SFN        + PW   ++++P LG DP
Sbjct: 53  MLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLL-----RAPWRFMRNIQPSLG-DP 112

Query: 61  YFVLKSTSLNCVKPTYQSFFEDKTIITDWDGQEGDIEEMGSPWEGAVVYRRNTSVSHVEY 120
              +KSTS+ CVKPTYQS FED +IITDW  QEGDIEEMGSPWEGAV+Y+RN+SVSHVEY
Sbjct: 113 CIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEY 172

Query: 121 CTTLERLGLEKLSTDVSKSRASKMGLRITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIV 180
           CTTLERLGLEKLSTDVSKSRAS MGLR+TK VKDYP GTPVQISVDVTRK+KKLRLDGIV
Sbjct: 173 CTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIV 232

Query: 181 KTVITLNCYRCCEPAPECIFSNFSIILSEEPIEEPEVINMGIISGQDIFKTYDGNSDEDD 240
           KTVITLNCYRCCEPAPECIFSNFSI+LSEEPIEEP+VINMGIISGQDIFKT +GNSDEDD
Sbjct: 233 KTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDD 292

Query: 241 EELIDLDDQLYFPLVEKEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLNTGSCN 300
           EE +DLDDQLYFP V+KEIDISKNIRDILHLEIT+N IC+PGC+GMCL CGINLNTGSCN
Sbjct: 293 EESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCN 352

Query: 301 CSKQDVKKNNFGPLGNLKRQMQNNS 326
           CSKQ VKKN+FGPLGNLKR+MQNNS
Sbjct: 353 CSKQAVKKNDFGPLGNLKRRMQNNS 371

[Close]

BLAST of Sed0013319 vs. ExPASy Swiss-Prot
Match: Q9LT27 (Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g19810 PE=2 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.6e-84
Identity = 157/246 (63.82%), Postives = 194/246 (78.86%), Query Frame = 0


Query: 77  QSFFEDKTIITDWDGQEGDIEEMGSPWEGAVVYRRNTSVSHVEYCTTLERLGLEKLSTDV 136
           +SF E  TI  DW+ QE +IE+ GSPWEG+V+YRRN SV+HVEYCTTLERLGL +LSTDV
Sbjct: 73  ESFTETSTIDMDWEDQE-EIEDTGSPWEGSVMYRRNASVTHVEYCTTLERLGLGRLSTDV 132

Query: 137 SKSRASKMGLRITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYRCCEPAP 196
           SK RAS MGLR+TK VKDYP GTPVQ+SVDV RK+KKLRLDGIV+TVITL C RC E   
Sbjct: 133 SKKRASAMGLRVTKDVKDYPDGTPVQVSVDVIRKKKKLRLDGIVRTVITLGCNRCGESTG 192

Query: 197 ECIFSNFSIILSEEPIEEPEVINMGIISGQDIFKTYDGNSDEDDEELIDLDDQLYFPLVE 256
           E IFSNFS++L+EEP+EEP+VI++G   G D  K    + D++D+  ID +D+L+FP   
Sbjct: 193 ESIFSNFSLLLTEEPVEEPDVIDLGFTFGND--KEEGEDDDDNDDSWIDWEDKLHFPPEV 252

Query: 257 KEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLNTGSCNCSKQDVKKNNFGPLGN 316
           KEIDISK+IRD++HLEIT+ AICD  C+GMCLKCG NLN   C+C +++ K   +GPLGN
Sbjct: 253 KEIDISKHIRDLVHLEITITAICDSACKGMCLKCGANLNKRKCDCGREE-KDKGYGPLGN 312

Query: 317 LKRQMQ 323
           L+ QMQ
Sbjct: 313 LREQMQ 314

[Close]

BLAST of Sed0013319 vs. ExPASy Swiss-Prot
Match: A0A1D6HQ92 (Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic OS=Zea mays OX=4577 GN=GRMZM2G433025 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.0e-54
Identity = 119/239 (49.79%), Postives = 164/239 (68.62%), Query Frame = 0


Query: 79  FFEDKTIITDWDGQEGDIEE-MGSPWEGAVVYRRNTSVSHVEYCTTLERLGLEKLSTDVS 138
           FF  +   T  + +   I++ + SPWEGAVVYRR+ +V H+EY +TLERLGL  LS+  S
Sbjct: 53  FFTVELDATGVEPEPDSIDDGLPSPWEGAVVYRRDAAVQHLEYASTLERLGLGDLSSPDS 112

Query: 139 KSRASKMGLR-ITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYRCCEPAP 198
           ++RA+ +GL   T         TPV +SVDVTR+  +LRLDGIV+TVITL C+RC EPAP
Sbjct: 113 RARAADLGLAGGTLDSTGAQPRTPVLVSVDVTRRRGRLRLDGIVRTVITLGCFRCAEPAP 172

Query: 199 ECIFSNFSIILSEEPIEEPEVINMGIISGQDIFK-------TYDGNSDEDDEELIDLDDQ 258
           + IF+NFS++L+E+P+EE    ++G I  +D  K         DG+ D      ID DD+
Sbjct: 173 QGIFANFSLLLTEDPVEEEP--DLGTIFQEDDDKGGASLACAMDGDQD------IDWDDR 232

Query: 259 LYFPLVEKEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLN-TGSCNCSKQDVK 308
           L+FP  +KEIDISK+IRD++HLEITL+A+C+P C+G+CL CG NLN T SC C  ++V+
Sbjct: 233 LHFPAADKEIDISKHIRDMIHLEITLDAVCNPNCKGLCLTCGANLNTTSSCTCKPRNVQ 283

[Close]

BLAST of Sed0013319 vs. ExPASy TrEMBL
Match: A0A5A7VN29 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001640 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.4e-147
Identity = 261/325 (80.31%), Postives = 287/325 (88.31%), Query Frame = 0


Query: 1   MPATFPISSILSSSHSNGVIKICCLKSKGNASFNPHFCFVDCKVPWTLKKDVKPRLGRDP 60
           M ATFP SS++SSSHS   I +   KSKGN SFN HF     +VPW   ++++P LG DP
Sbjct: 70  MLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSHF-----RVPWRFMRNIQPSLG-DP 129

Query: 61  YFVLKSTSLNCVKPTYQSFFEDKTIITDWDGQEGDIEEMGSPWEGAVVYRRNTSVSHVEY 120
              +KSTS+ CVKPTYQS FED +IITDW  QEGDIEEMGSPWEGAV+Y+RN+SVSHVEY
Sbjct: 130 CIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEY 189

Query: 121 CTTLERLGLEKLSTDVSKSRASKMGLRITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIV 180
           CTTLERLGLEKLSTDVSKSRAS MGLR+TK VKDYP GTPVQISVDVTRK+KKLRLDGIV
Sbjct: 190 CTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIV 249

Query: 181 KTVITLNCYRCCEPAPECIFSNFSIILSEEPIEEPEVINMGIISGQDIFKTYDGNSDEDD 240
           KTVITLNCYRCCEPAPECIFSNFSI+LSEEPIEEP+VINMGIISGQDIFKT +GNSDEDD
Sbjct: 250 KTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDD 309

Query: 241 EELIDLDDQLYFPLVEKEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLNTGSCN 300
           EE +DLDDQLYFP V+KEIDISKNIRDILHLEIT+N IC+PGC+GMCL CGINLNTGSCN
Sbjct: 310 EESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCN 369

Query: 301 CSKQDVKKNNFGPLGNLKRQMQNNS 326
           CSKQ VKKN+FGPLGNLKR+MQNNS
Sbjct: 370 CSKQAVKKNDFGPLGNLKRRMQNNS 388

[Close]

BLAST of Sed0013319 vs. ExPASy TrEMBL
Match: A0A1S3BR50 (uncharacterized protein LOC103492797 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492797 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.4e-146
Identity = 259/325 (79.69%), Postives = 286/325 (88.00%), Query Frame = 0


Query: 1   MPATFPISSILSSSHSNGVIKICCLKSKGNASFNPHFCFVDCKVPWTLKKDVKPRLGRDP 60
           M ATFP SS++SSSHS   I +   +SKGN SFN HF     +VPW   ++++P LG DP
Sbjct: 53  MLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSHF-----RVPWRFMRNIQPSLG-DP 112

Query: 61  YFVLKSTSLNCVKPTYQSFFEDKTIITDWDGQEGDIEEMGSPWEGAVVYRRNTSVSHVEY 120
              +KSTS+ CVKPTYQS FED +IITDW  QEGDIEEM SPWEGAV+Y+RN+SVSHVEY
Sbjct: 113 CIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEY 172

Query: 121 CTTLERLGLEKLSTDVSKSRASKMGLRITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIV 180
           CTTLERLGLEKLSTDVSKSRAS MGLR+TK VKDYP GTPVQISVDVTRK+KKLRLDGIV
Sbjct: 173 CTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIV 232

Query: 181 KTVITLNCYRCCEPAPECIFSNFSIILSEEPIEEPEVINMGIISGQDIFKTYDGNSDEDD 240
           KTVITLNCYRCCEPAPECIFSNFSI+LSEEPIEEP+VINMGIISGQDIFKT +GNSDEDD
Sbjct: 233 KTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDD 292

Query: 241 EELIDLDDQLYFPLVEKEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLNTGSCN 300
           EE +DLDDQLYFP V+KEIDISKNIRDILHLEIT+N IC+PGC+GMCL CGINLNTGSCN
Sbjct: 293 EESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCN 352

Query: 301 CSKQDVKKNNFGPLGNLKRQMQNNS 326
           CSKQ VKKN+FGPLGNLKR+MQNNS
Sbjct: 353 CSKQAVKKNDFGPLGNLKRRMQNNS 371

[Close]

BLAST of Sed0013319 vs. ExPASy TrEMBL
Match: A0A1S3BSU8 (uncharacterized protein LOC103492797 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492797 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.4e-146
Identity = 259/325 (79.69%), Postives = 286/325 (88.00%), Query Frame = 0


Query: 1   MPATFPISSILSSSHSNGVIKICCLKSKGNASFNPHFCFVDCKVPWTLKKDVKPRLGRDP 60
           M ATFP SS++SSSHS   I +   +SKGN SFN HF     +VPW   ++++P LG DP
Sbjct: 70  MLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSHF-----RVPWRFMRNIQPSLG-DP 129

Query: 61  YFVLKSTSLNCVKPTYQSFFEDKTIITDWDGQEGDIEEMGSPWEGAVVYRRNTSVSHVEY 120
              +KSTS+ CVKPTYQS FED +IITDW  QEGDIEEM SPWEGAV+Y+RN+SVSHVEY
Sbjct: 130 CIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEY 189

Query: 121 CTTLERLGLEKLSTDVSKSRASKMGLRITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIV 180
           CTTLERLGLEKLSTDVSKSRAS MGLR+TK VKDYP GTPVQISVDVTRK+KKLRLDGIV
Sbjct: 190 CTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIV 249

Query: 181 KTVITLNCYRCCEPAPECIFSNFSIILSEEPIEEPEVINMGIISGQDIFKTYDGNSDEDD 240
           KTVITLNCYRCCEPAPECIFSNFSI+LSEEPIEEP+VINMGIISGQDIFKT +GNSDEDD
Sbjct: 250 KTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDD 309

Query: 241 EELIDLDDQLYFPLVEKEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLNTGSCN 300
           EE +DLDDQLYFP V+KEIDISKNIRDILHLEIT+N IC+PGC+GMCL CGINLNTGSCN
Sbjct: 310 EESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCN 369

Query: 301 CSKQDVKKNNFGPLGNLKRQMQNNS 326
           CSKQ VKKN+FGPLGNLKR+MQNNS
Sbjct: 370 CSKQAVKKNDFGPLGNLKRRMQNNS 388

[Close]

BLAST of Sed0013319 vs. ExPASy TrEMBL
Match: A0A5D3D2J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00780 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 6.4e-145
Identity = 258/325 (79.38%), Postives = 284/325 (87.38%), Query Frame = 0


Query: 1   MPATFPISSILSSSHSNGVIKICCLKSKGNASFNPHFCFVDCKVPWTLKKDVKPRLGRDP 60
           M ATFP SS++SSSHS   I +   KSKGN SFN        + PW   ++++P LG DP
Sbjct: 53  MLATFPTSSVVSSSHSKEFINVFYFKSKGNVSFNSLL-----RAPWRFMRNIQPSLG-DP 112

Query: 61  YFVLKSTSLNCVKPTYQSFFEDKTIITDWDGQEGDIEEMGSPWEGAVVYRRNTSVSHVEY 120
              +KSTS+ CVKPTYQS FED +IITDW  QEGDIEEMGSPWEGAV+Y+RN+SVSHVEY
Sbjct: 113 CIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEY 172

Query: 121 CTTLERLGLEKLSTDVSKSRASKMGLRITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIV 180
           CTTLERLGLEKLSTDVSKSRAS MGLR+TK VKDYP GTPVQISVDVTRK+KKLRLDGIV
Sbjct: 173 CTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIV 232

Query: 181 KTVITLNCYRCCEPAPECIFSNFSIILSEEPIEEPEVINMGIISGQDIFKTYDGNSDEDD 240
           KTVITLNCYRCCEPAPECIFSNFSI+LSEEPIEEP+VINMGIISGQDIFKT +GNSDEDD
Sbjct: 233 KTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDD 292

Query: 241 EELIDLDDQLYFPLVEKEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLNTGSCN 300
           EE +DLDDQLYFP V+KEIDISKNIRDILHLEIT+N IC+PGC+GMCL CGINLNTGSCN
Sbjct: 293 EESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCN 352

Query: 301 CSKQDVKKNNFGPLGNLKRQMQNNS 326
           CSKQ VKKN+FGPLGNLKR+MQNNS
Sbjct: 353 CSKQAVKKNDFGPLGNLKRRMQNNS 371

[Close]

BLAST of Sed0013319 vs. ExPASy TrEMBL
Match: A0A0A0KAY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398180 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 9.3e-144
Identity = 255/325 (78.46%), Postives = 285/325 (87.69%), Query Frame = 0


Query: 1   MPATFPISSILSSSHSNGVIKICCLKSKGNASFNPHFCFVDCKVPWTLKKDVKPRLGRDP 60
           M ATFP SS++SSSHSN  I +   KSKG  SF+ HF     +VPW L ++++P LG DP
Sbjct: 1   MLATFPTSSVVSSSHSNEFINVFYFKSKGTVSFDSHF-----RVPWRLVRNIQPSLG-DP 60

Query: 61  YFVLKSTSLNCVKPTYQSFFEDKTIITDWDGQEGDIEEMGSPWEGAVVYRRNTSVSHVEY 120
              +KST++ CVKPTYQS FED +IITDW+ QEGDIEEM SPWEGA++Y+RN+SVSHVEY
Sbjct: 61  CIKMKSTAIKCVKPTYQSLFEDNSIITDWEDQEGDIEEMDSPWEGAIIYKRNSSVSHVEY 120

Query: 121 CTTLERLGLEKLSTDVSKSRASKMGLRITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIV 180
           CTTLERLGLEKLSTDVSKSRAS MGLR+TK VKDYP GTPVQISVDVTRK KKLRLDGIV
Sbjct: 121 CTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKNKKLRLDGIV 180

Query: 181 KTVITLNCYRCCEPAPECIFSNFSIILSEEPIEEPEVINMGIISGQDIFKTYDGNSDEDD 240
           KTVITLNCY CCEPAPECIFSNFSIILSEEPIEEP+VINMGIISG+D+FKT +GNSDEDD
Sbjct: 181 KTVITLNCYSCCEPAPECIFSNFSIILSEEPIEEPDVINMGIISGKDMFKTDNGNSDEDD 240

Query: 241 EELIDLDDQLYFPLVEKEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLNTGSCN 300
           EELIDLDDQLYFP + KEIDISKNIRDILHLEIT+N ICDPGC+G+CL CGINLNTGSC 
Sbjct: 241 EELIDLDDQLYFPPLNKEIDISKNIRDILHLEITMNVICDPGCKGICLNCGINLNTGSCK 300

Query: 301 CSKQDVKKNNFGPLGNLKRQMQNNS 326
           CSKQ VKKN+FGPLG+LKR+MQNNS
Sbjct: 301 CSKQAVKKNDFGPLGDLKRRMQNNS 319

[Close]

BLAST of Sed0013319 vs. TAIR 10
Match: AT3G19810.1 (Protein of unknown function (DUF177) )

HSP 1 Score: 314.3 bits (804), Expect = 1.1e-85
Identity = 157/246 (63.82%), Postives = 194/246 (78.86%), Query Frame = 0


Query: 77  QSFFEDKTIITDWDGQEGDIEEMGSPWEGAVVYRRNTSVSHVEYCTTLERLGLEKLSTDV 136
           +SF E  TI  DW+ QE +IE+ GSPWEG+V+YRRN SV+HVEYCTTLERLGL +LSTDV
Sbjct: 73  ESFTETSTIDMDWEDQE-EIEDTGSPWEGSVMYRRNASVTHVEYCTTLERLGLGRLSTDV 132

Query: 137 SKSRASKMGLRITKTVKDYPSGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYRCCEPAP 196
           SK RAS MGLR+TK VKDYP GTPVQ+SVDV RK+KKLRLDGIV+TVITL C RC E   
Sbjct: 133 SKKRASAMGLRVTKDVKDYPDGTPVQVSVDVIRKKKKLRLDGIVRTVITLGCNRCGESTG 192

Query: 197 ECIFSNFSIILSEEPIEEPEVINMGIISGQDIFKTYDGNSDEDDEELIDLDDQLYFPLVE 256
           E IFSNFS++L+EEP+EEP+VI++G   G D  K    + D++D+  ID +D+L+FP   
Sbjct: 193 ESIFSNFSLLLTEEPVEEPDVIDLGFTFGND--KEEGEDDDDNDDSWIDWEDKLHFPPEV 252

Query: 257 KEIDISKNIRDILHLEITLNAICDPGCQGMCLKCGINLNTGSCNCSKQDVKKNNFGPLGN 316
           KEIDISK+IRD++HLEIT+ AICD  C+GMCLKCG NLN   C+C +++ K   +GPLGN
Sbjct: 253 KEIDISKHIRDLVHLEITITAICDSACKGMCLKCGANLNKRKCDCGREE-KDKGYGPLGN 312

Query: 317 LKRQMQ 323
           L+ QMQ
Sbjct: 313 LREQMQ 314

The following BLAST results are available for this feature:

BLAST of Sed0013319 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897008.1	6.8e-149	81.54	large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-l...	[more]
KAA0067976.1	4.9e-147	80.31	uncharacterized protein E6C27_scaffold138G001640 [Cucumis melo var. makuwa]	[more]
XP_008451552.1	7.0e-146	79.69	PREDICTED: uncharacterized protein LOC103492797 isoform X2 [Cucumis melo]	[more]
XP_008451550.1	7.0e-146	79.69	PREDICTED: uncharacterized protein LOC103492797 isoform X1 [Cucumis melo]	[more]
TYK18147.1	1.3e-144	79.38	uncharacterized protein E5676_scaffold411G00780 [Cucumis melo var. makuwa]	[more]

BLAST of Sed0013319 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT27	1.6e-84	63.82	Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic O...	[more]
A0A1D6HQ92	1.0e-54	49.79	Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic O...	[more]

BLAST of Sed0013319 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VN29	2.4e-147	80.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BR50	3.4e-146	79.69	uncharacterized protein LOC103492797 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BSU8	3.4e-146	79.69	uncharacterized protein LOC103492797 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3D2J4	6.4e-145	79.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KAY7	9.3e-144	78.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398180 PE=4 SV=1	[more]

BLAST of Sed0013319 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19810.1	1.1e-85	63.82	Protein of unknown function (DUF177)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003772	Large ribosomal RNA subunit accumulation protein YceD	PFAM	PF02620	YceD	coord: 176..318 e-value: 2.3E-27 score: 95.5
None	No IPR available	PANTHER	PTHR34374	LARGE RIBOSOMAL RNA SUBUNIT ACCUMULATION PROTEIN YCED HOMOLOG 1, CHLOROPLASTIC	coord: 64..323

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013319.1	Sed0013319.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast