Sed0013210 (gene) Chayote v1

Overview


Name	Sed0013210
Type	gene
Organism	Sechium edule (Chayote v1)
Description	fasciclin-like arabinogalactan protein 7
Location	LG05: 7805145 .. 7806238 (-)
RNA-Seq Expression	Sed0013210
Synteny	Sed0013210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAACTTCTCTGTTCTTCATCTCTCTGCTCTTTACCTTGTTAGTTCTCTCTTTCTCTTTGTTTTCATATGTAAATTTACATAAATGAACTTTGGTTTTTCCATCTACAAATGGGGTTCTTCTGATTTTACATTTTTCTTCAAGAAACTAATTATTTGATGTCTTTTGTACATTTCAGGGACAGGACAGAAGGAAAAAAATGAAGCCTTACATGGTTTTCTTGTTTGGTCTTTGGTTACTGCTCTTGTGGTCATCATCGGCGTGTGCTCGAACTTCTGCTGAGCCCCCTTCATTCAGCCCGATTTCGGCACCGGCACCAGCACCTGCACCGGTTTCTGATCATGTTAACCTCACTGATTTACTTACTGTAGCTGGTCCTTTCCACAAGTTCCTTGGCTACCTTGTGTCCACCAATGTCATTGACACCTTCCAAAAGCAGGCTAATGATTCTGAAGAGGGAATAACCATATTTGTTCCTAAAGATAGTGCATTTTCATCACTTAAAAAGGCTTCCTTATCAAATTTGACAAAGGACCAGCTTAAGTCGCTGCTACTCTTTCATGGCTTACCACATTACTATACTCTTGCTGATTTCAATGACCTTAGCCAAAAGAGTCCCATTACTACATTTGCTGGTGAGCAGTACAGTTTGAATTTTACTGATGCGTCCGGCACGGTAAAGATTAGCTCAGGCTGGACGAACACGAAAGTCAGTAGTAGCGTGCTTTCAACTGATCCCATTGCTGTTTATCAAGTCGATCGTGTGCTCCTTCCAGAGGCGATTTTTGGTACTGATATCCCTCCCACCCCGGCTCCAGTACCAAGCCCCGATGTTGCTCCTGGTGCAGATTCTCCATCTGCTGAAACTGAAGGGAAAGCTTCTCCATCGTCGATCGAGTCACCTTCTTCTTCGTTTAGGATTGCTGGATGTGGACTCTGGGGCCAGTTGGTTATAGCAGTTTCAGGTGGAATGCTCCTGTTTTAGTGACGAAGGATAAAGATAATGTGCTTCTATTACTGTTTATTTCTCTGTGTCAATTTTGTTTAATGCAATGATGTGAAGCTCTTATATTCCAATTCTCTATGAAATGGCA

mRNA sequence

CTAAACTTCTCTGTTCTTCATCTCTCTGCTCTTTACCTTGGACAGGACAGAAGGAAAAAAATGAAGCCTTACATGGTTTTCTTGTTTGGTCTTTGGTTACTGCTCTTGTGGTCATCATCGGCGTGTGCTCGAACTTCTGCTGAGCCCCCTTCATTCAGCCCGATTTCGGCACCGGCACCAGCACCTGCACCGGTTTCTGATCATGTTAACCTCACTGATTTACTTACTGTAGCTGGTCCTTTCCACAAGTTCCTTGGCTACCTTGTGTCCACCAATGTCATTGACACCTTCCAAAAGCAGGCTAATGATTCTGAAGAGGGAATAACCATATTTGTTCCTAAAGATAGTGCATTTTCATCACTTAAAAAGGCTTCCTTATCAAATTTGACAAAGGACCAGCTTAAGTCGCTGCTACTCTTTCATGGCTTACCACATTACTATACTCTTGCTGATTTCAATGACCTTAGCCAAAAGAGTCCCATTACTACATTTGCTGGTGAGCAGTACAGTTTGAATTTTACTGATGCGTCCGGCACGGTAAAGATTAGCTCAGGCTGGACGAACACGAAAGTCAGTAGTAGCGTGCTTTCAACTGATCCCATTGCTGTTTATCAAGTCGATCGTGTGCTCCTTCCAGAGGCGATTTTTGGTACTGATATCCCTCCCACCCCGGCTCCAGTACCAAGCCCCGATGTTGCTCCTGGTGCAGATTCTCCATCTGCTGAAACTGAAGGGAAAGCTTCTCCATCGTCGATCGAGTCACCTTCTTCTTCGTTTAGGATTGCTGGATGTGGACTCTGGGGCCAGTTGGTTATAGCAGTTTCAGGTGGAATGCTCCTGTTTTAGTGACGAAGGATAAAGATAATGTGCTTCTATTACTGTTTATTTCTCTGTGTCAATTTTGTTTAATGCAATGATGTGAAGCTCTTATATTCCAATTCTCTATGAAATGGCA

Coding sequence (CDS)

ATGAAGCCTTACATGGTTTTCTTGTTTGGTCTTTGGTTACTGCTCTTGTGGTCATCATCGGCGTGTGCTCGAACTTCTGCTGAGCCCCCTTCATTCAGCCCGATTTCGGCACCGGCACCAGCACCTGCACCGGTTTCTGATCATGTTAACCTCACTGATTTACTTACTGTAGCTGGTCCTTTCCACAAGTTCCTTGGCTACCTTGTGTCCACCAATGTCATTGACACCTTCCAAAAGCAGGCTAATGATTCTGAAGAGGGAATAACCATATTTGTTCCTAAAGATAGTGCATTTTCATCACTTAAAAAGGCTTCCTTATCAAATTTGACAAAGGACCAGCTTAAGTCGCTGCTACTCTTTCATGGCTTACCACATTACTATACTCTTGCTGATTTCAATGACCTTAGCCAAAAGAGTCCCATTACTACATTTGCTGGTGAGCAGTACAGTTTGAATTTTACTGATGCGTCCGGCACGGTAAAGATTAGCTCAGGCTGGACGAACACGAAAGTCAGTAGTAGCGTGCTTTCAACTGATCCCATTGCTGTTTATCAAGTCGATCGTGTGCTCCTTCCAGAGGCGATTTTTGGTACTGATATCCCTCCCACCCCGGCTCCAGTACCAAGCCCCGATGTTGCTCCTGGTGCAGATTCTCCATCTGCTGAAACTGAAGGGAAAGCTTCTCCATCGTCGATCGAGTCACCTTCTTCTTCGTTTAGGATTGCTGGATGTGGACTCTGGGGCCAGTTGGTTATAGCAGTTTCAGGTGGAATGCTCCTGTTTTAG

Protein sequence

MKPYMVFLFGLWLLLLWSSSACARTSAEPPSFSPISAPAPAPAPVSDHVNLTDLLTVAGPFHKFLGYLVSTNVIDTFQKQANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLLLFHGLPHYYTLADFNDLSQKSPITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLSTDPIAVYQVDRVLLPEAIFGTDIPPTPAPVPSPDVAPGADSPSAETEGKASPSSIESPSSSFRIAGCGLWGQLVIAVSGGMLLF

Homology

[Close]

BLAST of Sed0013210 vs. NCBI nr
Match: XP_022140275.1 (fasciclin-like arabinogalactan protein 7 [Momordica charantia])

HSP 1 Score: 419.1 bits (1076), Expect = 2.8e-113
Identity = 226/262 (86.26%), Postives = 236/262 (90.08%), Query Frame = 0


Query: 1   MKPYMVFLFGLWLLLLWSSS-ACARTSAEPPSFSPISAPAPAPAPVSDHVNLTDLLTVAG 60
           M  Y++FLFG+WLLLL SSS ACART+A PPS SPI APAPAPAP  DHVNLTDLLTVAG
Sbjct: 1   MNLYLIFLFGIWLLLLCSSSPACARTAASPPSLSPIPAPAPAPAP--DHVNLTDLLTVAG 60

Query: 61  PFHKFLGYLVSTNVIDTFQKQANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLLL 120
           PFHKFLGYL ST VIDTFQKQANDSEEGITIFVPKD AFSSLKK SLSNLTK QLKSLLL
Sbjct: 61  PFHKFLGYLESTKVIDTFQKQANDSEEGITIFVPKDGAFSSLKKPSLSNLTKGQLKSLLL 120

Query: 121 FHGLPHYYTLADFNDLSQKSPITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLSTD 180
           FHGLPHYYTLADFN LSQKSPITTFAGEQY+LNFTDASGTV ISSGWTNTKVSSSVLSTD
Sbjct: 121 FHGLPHYYTLADFNALSQKSPITTFAGEQYTLNFTDASGTVHISSGWTNTKVSSSVLSTD 180

Query: 181 PIAVYQVDRVLLPEAIFGTDIPPTPAPVPSPDVAPGADSPSAETEGKASPSSIESPSSSF 240
           PIAVYQVD VLLPEAIFGTDIPP PAPVPSP+VAP ADSPSAETEG+  PSS+ SPSSSF
Sbjct: 181 PIAVYQVDDVLLPEAIFGTDIPPAPAPVPSPNVAPAADSPSAETEGRTYPSSMGSPSSSF 240

Query: 241 RIAGCGLWGQLVIAVSGGMLLF 262
           RI+G GL  QLV+AVS GMLLF
Sbjct: 241 RISGGGLCSQLVLAVSSGMLLF 260

[Close]

BLAST of Sed0013210 vs. NCBI nr
Match: XP_004138608.1 (fasciclin-like arabinogalactan protein 7 [Cucumis sativus] >XP_011649969.1 fasciclin-like arabinogalactan protein 7 [Cucumis sativus] >KGN63182.1 hypothetical protein Csa_021999 [Cucumis sativus])

HSP 1 Score: 414.1 bits (1063), Expect = 9.1e-112
Identity = 215/263 (81.75%), Postives = 235/263 (89.35%), Query Frame = 0


Query: 1   MKPYMVFLFGLWLLLLWSSSACARTSAEPPSFSPISA--PAPAPAPVSDHVNLTDLLTVA 60
           MK +M+FLFG+WL LL SS  CART+A+PP+ SPI A  PAPAPAP  DHV+L DLLTVA
Sbjct: 1   MKLHMIFLFGIWLTLLCSSPVCARTAAKPPAASPIPAPVPAPAPAPAGDHVDLADLLTVA 60

Query: 61  GPFHKFLGYLVSTNVIDTFQKQANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLL 120
           GPFHKFLGYL ST VI+TFQKQAN+SEEGITIFVPKD+AFSSLKK SLSNLTKDQ KSLL
Sbjct: 61  GPFHKFLGYLESTKVIETFQKQANNSEEGITIFVPKDTAFSSLKKPSLSNLTKDQRKSLL 120

Query: 121 LFHGLPHYYTLADFNDLSQKSPITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLST 180
           LFHGLPHYYTLADFN+LSQKSPITTFAGEQY+LNFTDASGT+ ISSGWTNTKVSSSVLST
Sbjct: 121 LFHGLPHYYTLADFNELSQKSPITTFAGEQYTLNFTDASGTIHISSGWTNTKVSSSVLST 180

Query: 181 DPIAVYQVDRVLLPEAIFGTDIPPTPAPVPSPDVAPGADSPSAETEGKASPSSIESPSSS 240
           DP+AVYQVD VLLPEAIFGTD PP PAPVP+PDVAP AD+PSAETEG  SPSS ESPSSS
Sbjct: 181 DPVAVYQVDHVLLPEAIFGTDFPPAPAPVPTPDVAPAADTPSAETEGSVSPSSTESPSSS 240

Query: 241 FRIAGCGLWGQLVIAVSGGMLLF 262
           FR+ G  LW QLV+A+SGG+LLF
Sbjct: 241 FRVGGGVLWIQLVLAISGGLLLF 263

[Close]

BLAST of Sed0013210 vs. NCBI nr
Match: XP_038900968.1 (fasciclin-like arabinogalactan protein 7 [Benincasa hispida] >XP_038900969.1 fasciclin-like arabinogalactan protein 7 [Benincasa hispida])

HSP 1 Score: 413.3 bits (1061), Expect = 1.6e-111
Identity = 217/263 (82.51%), Postives = 234/263 (88.97%), Query Frame = 0


Query: 1   MKPYMVFLFGLWLLLLWSSSACARTSAEPPSFSPISA--PAPAPAPVSDHVNLTDLLTVA 60
           MK YM+ LFG+WL+LL SS   ART+A+PP+ SPI A  PAPAPAP +  V L DLLTVA
Sbjct: 1   MKLYMILLFGIWLILLCSSPTHARTAAKPPALSPIPAPEPAPAPAPAAKSVILADLLTVA 60

Query: 61  GPFHKFLGYLVSTNVIDTFQKQANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLL 120
           GPFHKFLGYL ST VIDTFQKQANDSEEGITIFVPKD+AFSSLKK SLSNLTKDQLKSLL
Sbjct: 61  GPFHKFLGYLESTKVIDTFQKQANDSEEGITIFVPKDTAFSSLKKPSLSNLTKDQLKSLL 120

Query: 121 LFHGLPHYYTLADFNDLSQKSPITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLST 180
           LFHGLPHYYTLADFNDLSQKSPITTFAGEQY+LNFTDASGTV ISSGWTNTKVSSSVLST
Sbjct: 121 LFHGLPHYYTLADFNDLSQKSPITTFAGEQYTLNFTDASGTVHISSGWTNTKVSSSVLST 180

Query: 181 DPIAVYQVDRVLLPEAIFGTDIPPTPAPVPSPDVAPGADSPSAETEGKASPSSIESPSSS 240
           DP+AVYQVD VLLPEAIFG D PPTPAPVPSP+VAP AD+PSAETEG  SPSS ESPSSS
Sbjct: 181 DPVAVYQVDHVLLPEAIFGNDFPPTPAPVPSPNVAPAADTPSAETEGSVSPSSAESPSSS 240

Query: 241 FRIAGCGLWGQLVIAVSGGMLLF 262
           FRI+G  +W QLV+A+SGG+LLF
Sbjct: 241 FRISGGAIWSQLVLAISGGLLLF 263

[Close]

BLAST of Sed0013210 vs. NCBI nr
Match: XP_008455958.1 (PREDICTED: fasciclin-like arabinogalactan protein 7 [Cucumis melo])

HSP 1 Score: 412.9 bits (1060), Expect = 2.0e-111
Identity = 216/263 (82.13%), Postives = 233/263 (88.59%), Query Frame = 0


Query: 1   MKPYMVFLFGLWLLLLWSSSACARTSAEPPSFSPISA--PAPAPAPVSDHVNLTDLLTVA 60
           M+ +M+FLF +WL+LL SS  CART+A+PP+  PI A  PAPAPAP  DHVNL DLLTVA
Sbjct: 1   MELHMIFLFCIWLMLLCSSPVCARTAAKPPAVGPIPAPVPAPAPAPAGDHVNLADLLTVA 60

Query: 61  GPFHKFLGYLVSTNVIDTFQKQANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLL 120
           GPFHKFLGYL ST VI+TFQKQANDSEEGITIFVPKD+AFSSLKK SLSNLTKDQLKSLL
Sbjct: 61  GPFHKFLGYLESTKVIETFQKQANDSEEGITIFVPKDTAFSSLKKPSLSNLTKDQLKSLL 120

Query: 121 LFHGLPHYYTLADFNDLSQKSPITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLST 180
           LFHGLPHYYTLADFN LSQKSPITTFAGEQY LNFTDASGT+ ISSGWTNTKV+SSVLST
Sbjct: 121 LFHGLPHYYTLADFNKLSQKSPITTFAGEQYILNFTDASGTIHISSGWTNTKVTSSVLST 180

Query: 181 DPIAVYQVDRVLLPEAIFGTDIPPTPAPVPSPDVAPGADSPSAETEGKASPSSIESPSSS 240
           DP+AVYQVD VLLPEAIFGTD PP PAPVPSPDVAP AD+PSA+TEG  SPSS ESPSSS
Sbjct: 181 DPVAVYQVDHVLLPEAIFGTDFPPAPAPVPSPDVAPAADTPSAKTEGSVSPSSTESPSSS 240

Query: 241 FRIAGCGLWGQLVIAVSGGMLLF 262
           FR+AG  LW QLVIA+SGG LLF
Sbjct: 241 FRVAGGVLWIQLVIAISGGQLLF 263

[Close]

BLAST of Sed0013210 vs. NCBI nr
Match: XP_023512854.1 (fasciclin-like arabinogalactan protein 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.4 bits (1043), Expect = 1.9e-109
Identity = 213/262 (81.30%), Postives = 229/262 (87.40%), Query Frame = 0


Query: 1   MKPYMVFLFGLWLLLLW-SSSACARTSAEPPSFSPISAPAPAPAPVSDHVNLTDLLTVAG 60
           MK  ++ LFG+WL++L  SS ACA+T+A+PPSFSP  AP PAPAP +DHVNL DLLTVAG
Sbjct: 26  MKLCIILLFGIWLMMLMPSSPACAQTAAKPPSFSPTPAPEPAPAPAADHVNLADLLTVAG 85

Query: 61  PFHKFLGYLVSTNVIDTFQKQANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLLL 120
           PFHKFLGYL ST VIDTFQKQANDSEEGITIFVPKD AFSSL K SLSNLT +QLKSLLL
Sbjct: 86  PFHKFLGYLESTKVIDTFQKQANDSEEGITIFVPKDGAFSSLNKPSLSNLTNNQLKSLLL 145

Query: 121 FHGLPHYYTLADFNDLSQKSPITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLSTD 180
           FH LPHYYTLADFN LSQK PITTFAG+ Y+LNFTDASGTV ISSGWTNTKVSSSVLSTD
Sbjct: 146 FHALPHYYTLADFNGLSQKGPITTFAGQHYTLNFTDASGTVHISSGWTNTKVSSSVLSTD 205

Query: 181 PIAVYQVDRVLLPEAIFGTDIPPTPAPVPSPDVAPGADSPSAETEGKASPSSIESPSSSF 240
           PIAVYQVD VLLPEAIFGTD PPTPAPVPSPDVAP ADSPSAETE   SPSS ESPSSSF
Sbjct: 206 PIAVYQVDHVLLPEAIFGTDFPPTPAPVPSPDVAPAADSPSAETEDGVSPSSTESPSSSF 265

Query: 241 RIAGCGLWGQLVIAVSGGMLLF 262
           RIAG  +W QLV+A+S G+LLF
Sbjct: 266 RIAGMVVWSQLVLAISAGLLLF 287

[Close]

BLAST of Sed0013210 vs. ExPASy Swiss-Prot
Match: Q9SJ81 (Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana OX=3702 GN=FLA7 PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.5e-72
Identity = 142/213 (66.67%), Postives = 173/213 (81.22%), Query Frame = 0


Query: 20  SACARTSAEPPSFSPISAPAPAPAPVSDHVNLTDLLTVAGPFHKFLGYLVSTNVIDTFQK 79
           SA A+T++ P   +P+  P PAPAP  ++VNLT+LL+VAGPFH FL YL+ST VI+TFQ 
Sbjct: 19  SASAKTASPP---APVLPPTPAPAPAPENVNLTELLSVAGPFHTFLDYLLSTGVIETFQN 78

Query: 80  QANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLLLFHGLPHYYTLADFNDLSQKS 139
           QAN++EEGITIFVPKD AF + K   LSNLTKDQLK L+LFH LPHYY+L++F +LSQ  
Sbjct: 79  QANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSG 138

Query: 140 PITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLSTDPIAVYQVDRVLLPEAIFGTD 199
           P++TFAG QYSL FTD SGTV+I S WT TKVSSSV STDP+AVYQV+RVLLPEAIFGTD
Sbjct: 139 PVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVNRVLLPEAIFGTD 198

Query: 200 IPPTPAPVPSPDVAPGADSPS-AETEGKASPSS 232
           +PP PAP P+P V+  +DSPS A++EG +SP S
Sbjct: 199 VPPMPAPAPAPIVSAPSDSPSVADSEGASSPKS 228

[Close]

BLAST of Sed0013210 vs. ExPASy Swiss-Prot
Match: Q8LEE9 (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-27
Identity = 95/246 (38.62%), Postives = 138/246 (56.10%), Query Frame = 0


Query: 5   MVFLFGLWLLLLWSSSACARTSAEPPSFSPISAPAPAPAPVSDHVNLTDLLTVAGPFHKF 64
           ++ LF + LLL  +    ++        SP  APAP P P     N+T +L  AG F  F
Sbjct: 6   IILLFTVLLLLTTTPGILSQP-------SPAVAPAP-PGP----TNVTKILEKAGQFTVF 65

Query: 65  LGYLVSTNVIDTFQKQANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLLLFHGLP 124
           +  L ST V +    Q N+S+ GITIF P DS+F+ LK  +L++LT +Q   L+ FH +P
Sbjct: 66  IRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIP 125

Query: 125 HYYTLADFNDLSQKSPITTFAGE----QYSLNFTDASGTVKISSGWTNTKVSSSVLSTDP 184
            Y + ++F  +S  +P+ T AG+     + LN T +  TV I+SG TNT VS +V S   
Sbjct: 126 SYVSSSNFQTIS--NPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQ 185

Query: 185 IAVYQVDRVLLPEAIFGTDIPPTPAPVPSPDVAPGADSPSAETEGKASPSSIESPS-SSF 244
           +AVYQVD+VLLP+ +F    P  PAP P+P V     S S + +  +  SS +SP+ +SF
Sbjct: 186 LAVYQVDKVLLPQQVFD---PRPPAPAPAPSV-----SKSKKKKDDSDSSSDDSPADASF 229

Query: 245 RIAGCG 246
            +   G
Sbjct: 246 ALRNVG 229

[Close]

BLAST of Sed0013210 vs. ExPASy Swiss-Prot
Match: Q9SIL7 (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.6e-26
Identity = 81/205 (39.51%), Postives = 118/205 (57.56%), Query Frame = 0


Query: 39  APAPAPVSDHVNLTDLLTVAGPFHKFLGYLVSTNVIDTFQKQANDSEEGITIFVPKDSAF 98
           APAP      +NLT +L     F   +  L +T V      Q N S++G+TIF P D+AF
Sbjct: 27  APAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAF 86

Query: 99  SSLKKASLSNLTKDQLKSLLLFHGLPHYYTLADFNDLSQKSPITTFA----GEQYSLNFT 158
           + LK  +L++LT  Q   L+L+H +P YY+L+D   L   +P+ T A    G  + LNFT
Sbjct: 87  NKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDL--LLASNPVRTQATGQDGGVFGLNFT 146

Query: 159 D--ASGTVKISSGWTNTKVSSSVLSTDPIAVYQVDRVLLPEAIFGTDIPPTPAPVP-SPD 218
               S  V +S+G   T++++++    P+AVY VD VLLPE +FGT   PT AP P S  
Sbjct: 147 GQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFGTKTTPTGAPAPKSST 206

Query: 219 VAPGADSPSAETEGKASPSSIESPS 237
            +  ADSP+A+ E K++ SS++  S
Sbjct: 207 SSSDADSPAADDEHKSAGSSVKRTS 229

[Close]

BLAST of Sed0013210 vs. ExPASy Swiss-Prot
Match: Q8LEJ6 (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 4.4e-24
Identity = 85/228 (37.28%), Postives = 124/228 (54.39%), Query Frame = 0


Query: 39  APAPAPVSDHVNLTDLLTVAGPFHKFLGYLVSTNVIDTFQKQAN-DSEEGITIFVPKDSA 98
           APAP P S   N+T +L  AG F  F+  L ST   D    Q N  S  G+T+F P D+A
Sbjct: 26  APAPGP-SGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNA 85

Query: 99  FSSLKKASLSNLTKDQLKSLLLFHGLPHYYTLADFNDLSQKSPITTFAGE----QYSLNF 158
           F+SLK  +L++L+  Q   L+ FH LP   T+  F  +S  +P+ T AG+    ++ LN 
Sbjct: 86  FNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVS--NPLRTQAGDGQNGKFPLNI 145

Query: 159 TDASGTVKISSGWTNTKVSSSVLSTDPIAVYQVDRVLLPEAIFGTDIPPTPAPVPSPDVA 218
           T +   V I++G  +  V++SV S   +AVYQVD+VLLP A+FG+ + P PAP     V+
Sbjct: 146 TSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSSVAPAPAPEKGGSVS 205

Query: 219 PGADSPSAETEGKASPSSIESPSSSFRIAGCGLWGQLVIAVSGGMLLF 262
            G  S S   +G  S  S ++  + F   G G+    V A++    L+
Sbjct: 206 KG--SASGGDDGGDSTDSSDAERTGF---GFGIRITTVAAIAASSSLW 245

[Close]

BLAST of Sed0013210 vs. ExPASy Swiss-Prot
Match: Q9FFH6 (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA13 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.4e-24
Identity = 84/225 (37.33%), Postives = 119/225 (52.89%), Query Frame = 0


Query: 36  SAPAPAPAPVSDHVNLTDLLTVAGPFHKFLGYLVSTNVIDTFQKQANDSEEGITIFVPKD 95
           +APAP PA     +N+T +L   G F   +  L +T + +    Q N S EG+T+  P D
Sbjct: 25  AAPAPGPA---GPINITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTD 84

Query: 96  SAFSSLKKASLSNLTKDQLKSLLLFHGLPHYYTLADFNDLSQKSPITTFA-----GEQYS 155
           +AF +LK  +L+ L+ D    L+L+H  P +YTL D   LS  +P+ T A     G  Y 
Sbjct: 85  NAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDL--LSVSNPVRTQASGRDVGGVYG 144

Query: 156 LNFTDASGTVKISSGWTNTKVSSSVLSTDPIAVYQVDRVLLPEAIFGTDIPPTPAPVP-- 215
           LNFT     V +S+G   T++S+S+    P+AVY VD VLLPE +FG       AP P  
Sbjct: 145 LNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKS 204

Query: 216 -SPDVAPGADSPSAETEGKASPSSIESPSSSFRIAGCGLWGQLVI 253
            SPDV+  ++S    ++  A+PS  E   S     G GL   LV+
Sbjct: 205 KSPDVSDDSES----SKKAAAPSESEKSGSGEMNTGLGLGLGLVV 240

[Close]

BLAST of Sed0013210 vs. ExPASy TrEMBL
Match: A0A6J1CEN1 (fasciclin-like arabinogalactan protein 7 OS=Momordica charantia OX=3673 GN=LOC111010988 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.4e-113
Identity = 226/262 (86.26%), Postives = 236/262 (90.08%), Query Frame = 0


Query: 1   MKPYMVFLFGLWLLLLWSSS-ACARTSAEPPSFSPISAPAPAPAPVSDHVNLTDLLTVAG 60
           M  Y++FLFG+WLLLL SSS ACART+A PPS SPI APAPAPAP  DHVNLTDLLTVAG
Sbjct: 1   MNLYLIFLFGIWLLLLCSSSPACARTAASPPSLSPIPAPAPAPAP--DHVNLTDLLTVAG 60

Query: 61  PFHKFLGYLVSTNVIDTFQKQANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLLL 120
           PFHKFLGYL ST VIDTFQKQANDSEEGITIFVPKD AFSSLKK SLSNLTK QLKSLLL
Sbjct: 61  PFHKFLGYLESTKVIDTFQKQANDSEEGITIFVPKDGAFSSLKKPSLSNLTKGQLKSLLL 120

Query: 121 FHGLPHYYTLADFNDLSQKSPITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLSTD 180
           FHGLPHYYTLADFN LSQKSPITTFAGEQY+LNFTDASGTV ISSGWTNTKVSSSVLSTD
Sbjct: 121 FHGLPHYYTLADFNALSQKSPITTFAGEQYTLNFTDASGTVHISSGWTNTKVSSSVLSTD 180

Query: 181 PIAVYQVDRVLLPEAIFGTDIPPTPAPVPSPDVAPGADSPSAETEGKASPSSIESPSSSF 240
           PIAVYQVD VLLPEAIFGTDIPP PAPVPSP+VAP ADSPSAETEG+  PSS+ SPSSSF
Sbjct: 181 PIAVYQVDDVLLPEAIFGTDIPPAPAPVPSPNVAPAADSPSAETEGRTYPSSMGSPSSSF 240

Query: 241 RIAGCGLWGQLVIAVSGGMLLF 262
           RI+G GL  QLV+AVS GMLLF
Sbjct: 241 RISGGGLCSQLVLAVSSGMLLF 260

[Close]

BLAST of Sed0013210 vs. ExPASy TrEMBL
Match: A0A0A0LQV6 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G406800 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 4.4e-112
Identity = 215/263 (81.75%), Postives = 235/263 (89.35%), Query Frame = 0


Query: 1   MKPYMVFLFGLWLLLLWSSSACARTSAEPPSFSPISA--PAPAPAPVSDHVNLTDLLTVA 60
           MK +M+FLFG+WL LL SS  CART+A+PP+ SPI A  PAPAPAP  DHV+L DLLTVA
Sbjct: 1   MKLHMIFLFGIWLTLLCSSPVCARTAAKPPAASPIPAPVPAPAPAPAGDHVDLADLLTVA 60

Query: 61  GPFHKFLGYLVSTNVIDTFQKQANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLL 120
           GPFHKFLGYL ST VI+TFQKQAN+SEEGITIFVPKD+AFSSLKK SLSNLTKDQ KSLL
Sbjct: 61  GPFHKFLGYLESTKVIETFQKQANNSEEGITIFVPKDTAFSSLKKPSLSNLTKDQRKSLL 120

Query: 121 LFHGLPHYYTLADFNDLSQKSPITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLST 180
           LFHGLPHYYTLADFN+LSQKSPITTFAGEQY+LNFTDASGT+ ISSGWTNTKVSSSVLST
Sbjct: 121 LFHGLPHYYTLADFNELSQKSPITTFAGEQYTLNFTDASGTIHISSGWTNTKVSSSVLST 180

Query: 181 DPIAVYQVDRVLLPEAIFGTDIPPTPAPVPSPDVAPGADSPSAETEGKASPSSIESPSSS 240
           DP+AVYQVD VLLPEAIFGTD PP PAPVP+PDVAP AD+PSAETEG  SPSS ESPSSS
Sbjct: 181 DPVAVYQVDHVLLPEAIFGTDFPPAPAPVPTPDVAPAADTPSAETEGSVSPSSTESPSSS 240

Query: 241 FRIAGCGLWGQLVIAVSGGMLLF 262
           FR+ G  LW QLV+A+SGG+LLF
Sbjct: 241 FRVGGGVLWIQLVLAISGGLLLF 263

[Close]

BLAST of Sed0013210 vs. ExPASy TrEMBL
Match: A0A1S3C2T8 (fasciclin-like arabinogalactan protein 7 OS=Cucumis melo OX=3656 GN=LOC103496024 PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 9.8e-112
Identity = 216/263 (82.13%), Postives = 233/263 (88.59%), Query Frame = 0


Query: 1   MKPYMVFLFGLWLLLLWSSSACARTSAEPPSFSPISA--PAPAPAPVSDHVNLTDLLTVA 60
           M+ +M+FLF +WL+LL SS  CART+A+PP+  PI A  PAPAPAP  DHVNL DLLTVA
Sbjct: 1   MELHMIFLFCIWLMLLCSSPVCARTAAKPPAVGPIPAPVPAPAPAPAGDHVNLADLLTVA 60

Query: 61  GPFHKFLGYLVSTNVIDTFQKQANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLL 120
           GPFHKFLGYL ST VI+TFQKQANDSEEGITIFVPKD+AFSSLKK SLSNLTKDQLKSLL
Sbjct: 61  GPFHKFLGYLESTKVIETFQKQANDSEEGITIFVPKDTAFSSLKKPSLSNLTKDQLKSLL 120

Query: 121 LFHGLPHYYTLADFNDLSQKSPITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLST 180
           LFHGLPHYYTLADFN LSQKSPITTFAGEQY LNFTDASGT+ ISSGWTNTKV+SSVLST
Sbjct: 121 LFHGLPHYYTLADFNKLSQKSPITTFAGEQYILNFTDASGTIHISSGWTNTKVTSSVLST 180

Query: 181 DPIAVYQVDRVLLPEAIFGTDIPPTPAPVPSPDVAPGADSPSAETEGKASPSSIESPSSS 240
           DP+AVYQVD VLLPEAIFGTD PP PAPVPSPDVAP AD+PSA+TEG  SPSS ESPSSS
Sbjct: 181 DPVAVYQVDHVLLPEAIFGTDFPPAPAPVPSPDVAPAADTPSAKTEGSVSPSSTESPSSS 240

Query: 241 FRIAGCGLWGQLVIAVSGGMLLF 262
           FR+AG  LW QLVIA+SGG LLF
Sbjct: 241 FRVAGGVLWIQLVIAISGGQLLF 263

[Close]

BLAST of Sed0013210 vs. ExPASy TrEMBL
Match: A0A5A7UDG5 (Fasciclin-like arabinogalactan protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00900 PE=3 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.3e-107
Identity = 209/250 (83.60%), Postives = 222/250 (88.80%), Query Frame = 0


Query: 14  LLLWSSSACARTSAEPPSFSPISA--PAPAPAPVSDHVNLTDLLTVAGPFHKFLGYLVST 73
           +LL SS  CART+A+PP+  PI A  PAPAPAP  DHVNL DLLTVAGPFHKFLGYL ST
Sbjct: 1   MLLCSSPVCARTAAKPPAVGPIPAPVPAPAPAPAGDHVNLADLLTVAGPFHKFLGYLEST 60

Query: 74  NVIDTFQKQANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLLLFHGLPHYYTLAD 133
            VI+TFQKQANDSEEGITIFVPKD+AFSSLKK SLSNLTKDQLKSLLLFHGLPHYYTLAD
Sbjct: 61  KVIETFQKQANDSEEGITIFVPKDTAFSSLKKPSLSNLTKDQLKSLLLFHGLPHYYTLAD 120

Query: 134 FNDLSQKSPITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLSTDPIAVYQVDRVLL 193
           FN LSQKSPITTFAGEQY LNFTDASGT+ ISSGWTNTKV+SSVLSTDP+AVYQVD VLL
Sbjct: 121 FNKLSQKSPITTFAGEQYILNFTDASGTIHISSGWTNTKVTSSVLSTDPVAVYQVDHVLL 180

Query: 194 PEAIFGTDIPPTPAPVPSPDVAPGADSPSAETEGKASPSSIESPSSSFRIAGCGLWGQLV 253
           PEAIFGTD PP PAPVPSPDVAP AD+PSA+TEG  SPSS ESPSSSFR+AG  LW QLV
Sbjct: 181 PEAIFGTDFPPAPAPVPSPDVAPAADTPSAKTEGSVSPSSTESPSSSFRVAGGVLWIQLV 240

Query: 254 IAVSGGMLLF 262
           IA+SGG LLF
Sbjct: 241 IAISGGQLLF 250

[Close]

BLAST of Sed0013210 vs. ExPASy TrEMBL
Match: A0A5D3CIW8 (Fasciclin-like arabinogalactan protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00280 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 7.3e-107
Identity = 209/250 (83.60%), Postives = 221/250 (88.40%), Query Frame = 0


Query: 14  LLLWSSSACARTSAEPPSFSPISA--PAPAPAPVSDHVNLTDLLTVAGPFHKFLGYLVST 73
           L L SS  CART+A+PP+  PI A  PAPAPAP  DHVNL DLLTVAGPFHKFLGYL ST
Sbjct: 3   LTLCSSPVCARTAAKPPAVGPIPAPVPAPAPAPAGDHVNLADLLTVAGPFHKFLGYLEST 62

Query: 74  NVIDTFQKQANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLLLFHGLPHYYTLAD 133
            VI+TFQKQANDSEEGITIFVPKD+AFSSLKK SLSNLTKDQLKSLLLFHGLPHYYTLAD
Sbjct: 63  KVIETFQKQANDSEEGITIFVPKDTAFSSLKKPSLSNLTKDQLKSLLLFHGLPHYYTLAD 122

Query: 134 FNDLSQKSPITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLSTDPIAVYQVDRVLL 193
           FN LSQKSPITTFAGEQY LNFTDASGT+ ISSGWTNTKV+SSVLSTDP+AVYQVD VLL
Sbjct: 123 FNKLSQKSPITTFAGEQYILNFTDASGTIHISSGWTNTKVTSSVLSTDPVAVYQVDHVLL 182

Query: 194 PEAIFGTDIPPTPAPVPSPDVAPGADSPSAETEGKASPSSIESPSSSFRIAGCGLWGQLV 253
           PEAIFGTD PP PAPVPSPDVAP AD+PSA+TEG  SPSS ESPSSSFR+AG  LW QLV
Sbjct: 183 PEAIFGTDFPPAPAPVPSPDVAPAADTPSAKTEGSVSPSSTESPSSSFRVAGGVLWIQLV 242

Query: 254 IAVSGGMLLF 262
           IA+SGG LLF
Sbjct: 243 IAISGGQLLF 252

[Close]

BLAST of Sed0013210 vs. TAIR 10
Match: AT2G04780.1 (FASCICLIN-like arabinoogalactan 7 )

HSP 1 Score: 273.5 bits (698), Expect = 1.8e-73
Identity = 142/213 (66.67%), Postives = 173/213 (81.22%), Query Frame = 0


Query: 20  SACARTSAEPPSFSPISAPAPAPAPVSDHVNLTDLLTVAGPFHKFLGYLVSTNVIDTFQK 79
           SA A+T++ P   +P+  P PAPAP  ++VNLT+LL+VAGPFH FL YL+ST VI+TFQ 
Sbjct: 19  SASAKTASPP---APVLPPTPAPAPAPENVNLTELLSVAGPFHTFLDYLLSTGVIETFQN 78

Query: 80  QANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLLLFHGLPHYYTLADFNDLSQKS 139
           QAN++EEGITIFVPKD AF + K   LSNLTKDQLK L+LFH LPHYY+L++F +LSQ  
Sbjct: 79  QANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSG 138

Query: 140 PITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLSTDPIAVYQVDRVLLPEAIFGTD 199
           P++TFAG QYSL FTD SGTV+I S WT TKVSSSV STDP+AVYQV+RVLLPEAIFGTD
Sbjct: 139 PVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVNRVLLPEAIFGTD 198

Query: 200 IPPTPAPVPSPDVAPGADSPS-AETEGKASPSS 232
           +PP PAP P+P V+  +DSPS A++EG +SP S
Sbjct: 199 VPPMPAPAPAPIVSAPSDSPSVADSEGASSPKS 228

[Close]

BLAST of Sed0013210 vs. TAIR 10
Match: AT2G04780.2 (FASCICLIN-like arabinoogalactan 7 )

HSP 1 Score: 273.5 bits (698), Expect = 1.8e-73
Identity = 142/213 (66.67%), Postives = 173/213 (81.22%), Query Frame = 0


Query: 20  SACARTSAEPPSFSPISAPAPAPAPVSDHVNLTDLLTVAGPFHKFLGYLVSTNVIDTFQK 79
           SA A+T++ P   +P+  P PAPAP  ++VNLT+LL+VAGPFH FL YL+ST VI+TFQ 
Sbjct: 19  SASAKTASPP---APVLPPTPAPAPAPENVNLTELLSVAGPFHTFLDYLLSTGVIETFQN 78

Query: 80  QANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLLLFHGLPHYYTLADFNDLSQKS 139
           QAN++EEGITIFVPKD AF + K   LSNLTKDQLK L+LFH LPHYY+L++F +LSQ  
Sbjct: 79  QANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSG 138

Query: 140 PITTFAGEQYSLNFTDASGTVKISSGWTNTKVSSSVLSTDPIAVYQVDRVLLPEAIFGTD 199
           P++TFAG QYSL FTD SGTV+I S WT TKVSSSV STDP+AVYQV+RVLLPEAIFGTD
Sbjct: 139 PVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVNRVLLPEAIFGTD 198

Query: 200 IPPTPAPVPSPDVAPGADSPS-AETEGKASPSS 232
           +PP PAP P+P V+  +DSPS A++EG +SP S
Sbjct: 199 VPPMPAPAPAPIVSAPSDSPSVADSEGASSPKS 228

[Close]

BLAST of Sed0013210 vs. TAIR 10
Match: AT5G60490.1 (FASCICLIN-like arabinogalactan-protein 12 )

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-28
Identity = 95/246 (38.62%), Postives = 138/246 (56.10%), Query Frame = 0


Query: 5   MVFLFGLWLLLLWSSSACARTSAEPPSFSPISAPAPAPAPVSDHVNLTDLLTVAGPFHKF 64
           ++ LF + LLL  +    ++        SP  APAP P P     N+T +L  AG F  F
Sbjct: 6   IILLFTVLLLLTTTPGILSQP-------SPAVAPAP-PGP----TNVTKILEKAGQFTVF 65

Query: 65  LGYLVSTNVIDTFQKQANDSEEGITIFVPKDSAFSSLKKASLSNLTKDQLKSLLLFHGLP 124
           +  L ST V +    Q N+S+ GITIF P DS+F+ LK  +L++LT +Q   L+ FH +P
Sbjct: 66  IRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIP 125

Query: 125 HYYTLADFNDLSQKSPITTFAGE----QYSLNFTDASGTVKISSGWTNTKVSSSVLSTDP 184
            Y + ++F  +S  +P+ T AG+     + LN T +  TV I+SG TNT VS +V S   
Sbjct: 126 SYVSSSNFQTIS--NPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQ 185

Query: 185 IAVYQVDRVLLPEAIFGTDIPPTPAPVPSPDVAPGADSPSAETEGKASPSSIESPS-SSF 244
           +AVYQVD+VLLP+ +F    P  PAP P+P V     S S + +  +  SS +SP+ +SF
Sbjct: 186 LAVYQVDKVLLPQQVFD---PRPPAPAPAPSV-----SKSKKKKDDSDSSSDDSPADASF 229

Query: 245 RIAGCG 246
            +   G
Sbjct: 246 ALRNVG 229

[Close]

BLAST of Sed0013210 vs. TAIR 10
Match: AT2G20520.1 (FASCICLIN-like arabinogalactan 6 )

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-27
Identity = 81/205 (39.51%), Postives = 118/205 (57.56%), Query Frame = 0


Query: 39  APAPAPVSDHVNLTDLLTVAGPFHKFLGYLVSTNVIDTFQKQANDSEEGITIFVPKDSAF 98
           APAP      +NLT +L     F   +  L +T V      Q N S++G+TIF P D+AF
Sbjct: 27  APAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAF 86

Query: 99  SSLKKASLSNLTKDQLKSLLLFHGLPHYYTLADFNDLSQKSPITTFA----GEQYSLNFT 158
           + LK  +L++LT  Q   L+L+H +P YY+L+D   L   +P+ T A    G  + LNFT
Sbjct: 87  NKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDL--LLASNPVRTQATGQDGGVFGLNFT 146

Query: 159 D--ASGTVKISSGWTNTKVSSSVLSTDPIAVYQVDRVLLPEAIFGTDIPPTPAPVP-SPD 218
               S  V +S+G   T++++++    P+AVY VD VLLPE +FGT   PT AP P S  
Sbjct: 147 GQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFGTKTTPTGAPAPKSST 206

Query: 219 VAPGADSPSAETEGKASPSSIESPS 237
            +  ADSP+A+ E K++ SS++  S
Sbjct: 207 SSSDADSPAADDEHKSAGSSVKRTS 229

[Close]

BLAST of Sed0013210 vs. TAIR 10
Match: AT5G03170.1 (FASCICLIN-like arabinogalactan-protein 11 )

HSP 1 Score: 113.2 bits (282), Expect = 3.1e-25
Identity = 85/228 (37.28%), Postives = 124/228 (54.39%), Query Frame = 0


Query: 39  APAPAPVSDHVNLTDLLTVAGPFHKFLGYLVSTNVIDTFQKQAN-DSEEGITIFVPKDSA 98
           APAP P S   N+T +L  AG F  F+  L ST   D    Q N  S  G+T+F P D+A
Sbjct: 26  APAPGP-SGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNA 85

Query: 99  FSSLKKASLSNLTKDQLKSLLLFHGLPHYYTLADFNDLSQKSPITTFAGE----QYSLNF 158
           F+SLK  +L++L+  Q   L+ FH LP   T+  F  +S  +P+ T AG+    ++ LN 
Sbjct: 86  FNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVS--NPLRTQAGDGQNGKFPLNI 145

Query: 159 TDASGTVKISSGWTNTKVSSSVLSTDPIAVYQVDRVLLPEAIFGTDIPPTPAPVPSPDVA 218
           T +   V I++G  +  V++SV S   +AVYQVD+VLLP A+FG+ + P PAP     V+
Sbjct: 146 TSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSSVAPAPAPEKGGSVS 205

Query: 219 PGADSPSAETEGKASPSSIESPSSSFRIAGCGLWGQLVIAVSGGMLLF 262
            G  S S   +G  S  S ++  + F   G G+    V A++    L+
Sbjct: 206 KG--SASGGDDGGDSTDSSDAERTGF---GFGIRITTVAAIAASSSLW 245

The following BLAST results are available for this feature:

BLAST of Sed0013210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140275.1	2.8e-113	86.26	fasciclin-like arabinogalactan protein 7 [Momordica charantia]	[more]
XP_004138608.1	9.1e-112	81.75	fasciclin-like arabinogalactan protein 7 [Cucumis sativus] >XP_011649969.1 fasci...	[more]
XP_038900968.1	1.6e-111	82.51	fasciclin-like arabinogalactan protein 7 [Benincasa hispida] >XP_038900969.1 fas...	[more]
XP_008455958.1	2.0e-111	82.13	PREDICTED: fasciclin-like arabinogalactan protein 7 [Cucumis melo]	[more]
XP_023512854.1	1.9e-109	81.30	fasciclin-like arabinogalactan protein 7 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0013210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ81	2.5e-72	66.67	Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana OX=3702 GN=FLA7...	[more]
Q8LEE9	1.4e-27	38.62	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9SIL7	3.6e-26	39.51	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6...	[more]
Q8LEJ6	4.4e-24	37.28	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9FFH6	4.4e-24	37.33	Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]

BLAST of Sed0013210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CEN1	1.4e-113	86.26	fasciclin-like arabinogalactan protein 7 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A0A0LQV6	4.4e-112	81.75	FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G406800 PE=3 S...	[more]
A0A1S3C2T8	9.8e-112	82.13	fasciclin-like arabinogalactan protein 7 OS=Cucumis melo OX=3656 GN=LOC103496024...	[more]
A0A5A7UDG5	3.3e-107	83.60	Fasciclin-like arabinogalactan protein 7 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3CIW8	7.3e-107	83.60	Fasciclin-like arabinogalactan protein 7 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Sed0013210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04780.1	1.8e-73	66.67	FASCICLIN-like arabinoogalactan 7	[more]
AT2G04780.2	1.8e-73	66.67	FASCICLIN-like arabinoogalactan 7	[more]
AT5G60490.1	1.0e-28	38.62	FASCICLIN-like arabinogalactan-protein 12	[more]
AT2G20520.1	2.5e-27	39.51	FASCICLIN-like arabinogalactan 6	[more]
AT5G03170.1	3.1e-25	37.28	FASCICLIN-like arabinogalactan-protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 89..193 e-value: 1.1E-26 score: 104.6
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 61..192 e-value: 6.3E-22 score: 78.2
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 48..190 score: 19.885025
IPR036378	FAS1 domain superfamily	GENE3D	2.30.180.10	FAS1 domain	coord: 33..193 e-value: 8.9E-19 score: 70.2
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 47..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..237
None	No IPR available	PANTHER	PTHR32077:SF70	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7	coord: 6..259
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..22 score: 5.0
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 6..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013210.1	Sed0013210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
cellular_component	GO:0005886	plasma membrane