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Sed0013201 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAGTTTCGATTAGGAGCGCTGTGACGGAGAGCGATATCATCGGAAAAGTTCCGCCGCCGTGAGATTCCGATCGGCTGCCGTCGTCGCCGGTAATCACTGCTCGACCAGTAAAGAACTTGGCCGTTAGATCAATCGCTTCCTTTTCTATCAGAAATTACTTCTTTCTTGTCTCCGTTGTTTGATTTTGATTCTCCTTCTTGAATCCGTCACCGTCCAGCTCTCAGTCTCTTCACCGATCCATCAGCGAAATCTCCAGTGCAGGTACACTCTTTAGTTTCACTGTTTCAGTTTCTTTTCTTGGAACTCTGAATGAACTTGACTCCAAATCTTACACTAGATTTGTTTCTAACTGTAGATAGTGGTTTTCTGAAGAGGACAGGGGGATTGCTTCTGTGTTTTTTGAGTCGATTCATAAAAAATCTTGCTTAAAGGAATCCTGATCTGTTTCTGCTTAGATTTTGCATTTTTCGAATCTATAAGTTTCTTCCCTTTTACTAGACATAGATATAAGATCCCATGTATTTATGATTTTTCTCTTATCACCGCCCTCGTAATCCTACCTAAGAAGTCGAGTTAAGTAAGTGGAGAAGCGGAGAACTGAATTAATCGTTGCTGTGCTAAGCTGCTGATTGTAGAGTTTGGTGAGAACTGAGAATATTGGGTTTTTTTTTAGAATCTCATGAGGTGTTTGGATGGGGATTTAGTTTGAGGATTTATGTTGATGATTTATTTTGAGTAGTTAGAAATTGCGCTTTTTATAATAGCTCGTTTGGATGTAGATTTTTATGGAATAATTGCAGCAAAACTTGTTTGGATGTGATTTTTTTTATAGAAGAGTTAGAGAAAATAACTTGTTTGGATGTGGATTTGATATGGAGAGTTATTTTGAATAGTTTGAAATGAAAGATTAGAAATGAACGGATGAACATGAGTTATTTTGAGTAGTTAGAAATGAATAATTCAAAATGACTGGTTAGAAATGAGAAGTTATTTTGATTATTTAGAAATGAGGAGTTATTTTGATTTTTGAGTCATTAGGAATGAGTTGTTTTGAGTAGTTTCAATAGTTAGTTTGGATGTATTTTTTCGAATAATAGTTAGTAAATAGTCATTTCTAAATCCTCCATAAATTCAAAAAACAAATACCCCCTTATACTTGTAGGCCATTTTAATGCATTATTGATTTGATTCAATTTTTTTTTTCCCTCTTTCAGTAACCATGCAGTTCTTTGGTGGGTCAGAGATTAGCCCTTCGCCTCCAGTCCCGGCAGCAACTGGAAACAATGTCCATATGATGTATATTTTCAACAGGAATGGAGTTTGCTTGTTCTACAGGGAGTGGAATCGGCCTCTTCGGACATTGAATCCCCAGCAAGACCACAAACTTATGTTTGGTTTGCTTTTCTCGCTCAAATCCTTCACTGCCAAAATGGACCCAACCAGGTTTATCTTTCTTTCTTCACTGGGAAACTACTTTGATTTTTGGTGTGCCTAGTTTTACAAATGATCCAACAAGATGGGAGATTGATGTGAACTTGTGAACTATATTTTTGTCTTTATACTCCAACAAAGCATTGTTCTATTACACGGTTTGGTGGCAATAACTAACAACATGTGTTATTTGATTGTAGAGTTTGGTCTCGGTTTTTCCAAGTCTTTATCTTATTAAGAAATGATGAGCTGTTTGTTTTTTGTTGGAACAGTGCTGACAAAGACAATCTTGGGGTGCCTCAGTTACCTGGCCAAGGTTGTTCACTTCATAGTTTTCGTACAAATACTTACAAGCTCAGTTTTACTGAAACTCCATCAGGGATAAAGGTTATTTCAACCGTCCTCTCCCTGTTATTTTCAATACTTGCCAATGTAGTTTCATGCGTGTCTACTTGAATTGTTGAGTTAAATAATATGATATATGGCATGATCGACTAAAAAAAATAATGTATTGCCCGGAACTAACTACATATGAATTATTGAGATTTAACCAATGTTTGGTTTTTTGTTCGTCATTTATATTTATATTCAGTGTTCTTATCATTGTTTTTGGACGTGGTAGATGGGAGTTTAAAGGGTTCTTTCTTCTCTAAACTAGTTGTGTTACATGGATAACTATGTTTTGATTTGTAAGTAACCTCCCTCCTGTCTTGTTTTTATAAAGTTCAGTACATTTGGTATGATTAATACTTCCAACGAACCTCCTTTTTGTTTCTAATTTTATTCTTGGAGTTAAAGCTTGACTCTTGGAAGAAGCCCTGTGAAGCTGCTATTTAATTGTTACTGCTTTTGAAAAATAATTTATCTGTGTTACAAACTGCCTTGCCATGAACTATAATGTTGCATTGCTCGATTGATAACTTAGTTTAATGCTCAATTTTGTGTGAGTTGATGGATTATTTCATTTGTTTTCAGATTATCCTTGTTACCCATCCTAGAACCGGTGATCTAAGGGACTCATTGAAGTACATATACAACTTGTATGTTGAATATGTTGTGAAAAATCCACTATACAGTCCAGGAACCCCAATCAGGTAAATTATTAGCTTTGGTTGATGCTTAATTCCTATATACCAACTATAGTAATTTAATCAAAAGAAACTCATTTTGAAGTCTTGCAAAATAAAATCCATCTTCGATGAATTTGAGATTTGTAATGCAGGCATCCATTTCTTTTAGTTTAGAAATGATCAAATGACTCCTGGCATAGGAAACCTATTATTGGTGCTTGCACTTGTATCTTAACTATAAGCACTTTAAATTTCTCTCAGAGGGCCTTTTATACGATATATTTATTTATTTATTTATTGGTGCTTGACTCCTGGCATAGGATAAATTACATCTTTAGTCTTTGGGGGTTTGAGCTTTGTTTCAATTTGGTTTCTATGATTTGATAATTACATTGTAGTCCTTGTGGCTGAGTTCAATCTCTCAAAAGCATTTTTATTATTTATCATATGTTATCAGTTTTCTTACTTGACATGGATTTTCCCCCAGGTTTTATGTTGAAAGGAGAGAATAATTGTACTTTTAAGCTTAAGGCGGCATGGGTAAAGGTTAAATTGGCAAACAAGTTTAAATTGAGTACAAAATAAAATAAAATTGGGTGGATATTTGTTAGGTTCCCAACACGAAGTTAATAAAAAAAGAGTTCTAAAGGTATCTTATATTAGCTGGTAAATATGAGATTAGAGATTTGATTCCCCCTTCCTCTAAAATGTTGTTGAATAAAAAAAAGTACCTAACACAAAAATACACAAGATACCAATATATTACAATATGAAAAAGAGGCTTTGGAGAGCTATTTCTCTCCTTCCTTCTAGTGTTCTTAATGCTCCTTAATCCTTATTTGTAACCAAGACACCCCTAACTAATATTTCTATGCCCTTACAAATAACGTACTAATCTGTTCCAACCATCATCCTTGAAGAATTAAAATTAATAGGTGATGGGTTCAATTTTTTTTGAAACAAGTGTAACCACCCCCGTCCCTAGGCTAGGCATCGGAGACATCGAAGGAGTATATCACAGGTCAGTCTCGAACCCAAGACCTTGAGGGGAGCATACTCTCAAAACCCAACTTTTCAACCACATGCACCACCCTTGGGGACGAGTTCAATTCATAATGATCACATACCTAAAATTAATTTCCTACATATTTCCTTGATATCTAAATGTTGTAGGGTCTGACGGTATGTTTCATGAGAATAGTCAAAGTATGTGGAAACTAGCCAGGACACTAATAGATACAAAATTAAAAAATCTCTTCCACATATCTCATACTAGGATCCTCACTCTCGCTGTATACAAGTAACGAAGAAACAAATTTGAGTAAAAAGGGACAGGTTATGGGTTGGGGACACGGGTTTTCTTAGAGTCAAAATTGAAACCAAACTCAAACTATATAGACTAAAATGTTAACTTAACCCTTCACTTACCTGAAAGTCTTACATTGGTGAACGTATATTCCTTGCGTTAATGTTTCCCAGTCTACTCCTTTTAAACAAAAGATCTGAAATTAATTTTCCTTTTTTTGTAACTTTTCATTTTATCAATGAAATTTTTTGGTTTCCTATCCAAAAAAAAAAAAAAAACACAAAAGATCTGAAATGTTAGAAAATATTTTTTACGGTTTATTCCTAGAAAATATTGTTTACAGATTTAATACTACCCCCTTAATCCTGCCTTCTATGATATAGTTTTTATTACGAAAGTAAAGTTATTCGTGTTTGTTCTTGACACTTCTTTGATTAGTCAGTTGGTTTTGATTTCTGCAGATGTGAGCTATTCATTACAAGTCTTGACCAATATGTAAGGCACATATCGTAAAAATCATAGGTATTGACTGCTCTGCCATTTTAGTTTCATTCAAGTCATATGCTATCTTCCTTTTGTTCATGAAGGGAGTTCCTTTCCTATTCCATTTGTTGGACTCTATAGAGTGCGCCTGCCCCGAATTATTCAAGTCTTTTTTTTTTTTTTCCTTTTTTTCCTCCCAACATTCTTGTGTTAACTTCTGGTGTTGTGATAGTGGTGGAATGAGAGAGAAAAAAAGAAGGAATTCTAGTATAGATGTTTGCTGCTCATGTATGAATTGCAGCAGTGCAGCTGTATTGATTGTTTCATGTACTCACGTACTATAAACATTAGGAGTCCTTTATGTAAAAATGTGAAAGGTTTCAAACGTCGTGGTTGCGTTCAA TCAGTTTCGATTAGGAGCGCTGTGACGGAGAGCGATATCATCGGAAAAGTTCCGCCGCCGTGAGATTCCGATCGGCTGCCGTCGTCGCCGGTAATCACTGCTCGACCAGTAAAGAACTTGGCCGTTAGATCAATCGCTTCCTTTTCTATCAGAAATTACTTCTTTCTTGTCTCCGTTGTTTGATTTTGATTCTCCTTCTTGAATCCGTCACCGTCCAGCTCTCAGTCTCTTCACCGATCCATCAGCGAAATCTCCAGTGCAGTAACCATGCAGTTCTTTGGTGGGTCAGAGATTAGCCCTTCGCCTCCAGTCCCGGCAGCAACTGGAAACAATGTCCATATGATGTATATTTTCAACAGGAATGGAGTTTGCTTGTTCTACAGGGAGTGGAATCGGCCTCTTCGGACATTGAATCCCCAGCAAGACCACAAACTTATGTTTGGTTTGCTTTTCTCGCTCAAATCCTTCACTGCCAAAATGGACCCAACCAGTGCTGACAAAGACAATCTTGGGGTGCCTCAGTTACCTGGCCAAGGTTGTTCACTTCATAGTTTTCGTACAAATACTTACAAGCTCAGTTTTACTGAAACTCCATCAGGGATAAAGATTATCCTTGTTACCCATCCTAGAACCGGTGATCTAAGGGACTCATTGAAGTACATATACAACTTGTATGTTGAATATGTTGTGAAAAATCCACTATACAGTCCAGGAACCCCAATCAGATGTGAGCTATTCATTACAAGTCTTGACCAATATGTAAGGCACATATCGTAAAAATCATAGGTATTGACTGCTCTGCCATTTTAGTTTCATTCAAGTCATATGCTATCTTCCTTTTGTTCATGAAGGGAGTTCCTTTCCTATTCCATTTGTTGGACTCTATAGAGTGCGCCTGCCCCGAATTATTCAAGTCTTTTTTTTTTTTTTCCTTTTTTTCCTCCCAACATTCTTGTGTTAACTTCTGGTGTTGTGATAGTGGTGGAATGAGAGAGAAAAAAAGAAGGAATTCTAGTATAGATGTTTGCTGCTCATGTATGAATTGCAGCAGTGCAGCTGTATTGATTGTTTCATGTACTCACGTACTATAAACATTAGGAGTCCTTTATGTAAAAATGTGAAAGGTTTCAAACGTCGTGGTTGCGTTCAA ATGCAGTTCTTTGGTGGGTCAGAGATTAGCCCTTCGCCTCCAGTCCCGGCAGCAACTGGAAACAATGTCCATATGATGTATATTTTCAACAGGAATGGAGTTTGCTTGTTCTACAGGGAGTGGAATCGGCCTCTTCGGACATTGAATCCCCAGCAAGACCACAAACTTATGTTTGGTTTGCTTTTCTCGCTCAAATCCTTCACTGCCAAAATGGACCCAACCAGTGCTGACAAAGACAATCTTGGGGTGCCTCAGTTACCTGGCCAAGGTTGTTCACTTCATAGTTTTCGTACAAATACTTACAAGCTCAGTTTTACTGAAACTCCATCAGGGATAAAGATTATCCTTGTTACCCATCCTAGAACCGGTGATCTAAGGGACTCATTGAAGTACATATACAACTTGTATGTTGAATATGTTGTGAAAAATCCACTATACAGTCCAGGAACCCCAATCAGATGTGAGCTATTCATTACAAGTCTTGACCAATATGTAAGGCACATATCGTAA MQFFGGSEISPSPPVPAATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGLLFSLKSFTAKMDPTSADKDNLGVPQLPGQGCSLHSFRTNTYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIRCELFITSLDQYVRHIS Homology
BLAST of Sed0013201 vs. NCBI nr
Match: XP_038906999.1 (trafficking protein particle complex subunit 1 [Benincasa hispida] >XP_038907000.1 trafficking protein particle complex subunit 1 [Benincasa hispida]) HSP 1 Score: 345.1 bits (884), Expect = 3.4e-91 Identity = 161/168 (95.83%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of Sed0013201 vs. NCBI nr
Match: XP_004145907.1 (trafficking protein particle complex subunit 1 [Cucumis sativus] >XP_031741655.1 trafficking protein particle complex subunit 1 [Cucumis sativus] >KGN49914.1 hypothetical protein Csa_000153 [Cucumis sativus]) HSP 1 Score: 344.4 bits (882), Expect = 5.7e-91 Identity = 161/168 (95.83%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of Sed0013201 vs. NCBI nr
Match: XP_008437540.1 (PREDICTED: trafficking protein particle complex subunit 1 [Cucumis melo] >XP_008437541.1 PREDICTED: trafficking protein particle complex subunit 1 [Cucumis melo]) HSP 1 Score: 344.0 bits (881), Expect = 7.5e-91 Identity = 161/168 (95.83%), Postives = 161/168 (95.83%), Query Frame = 0
BLAST of Sed0013201 vs. NCBI nr
Match: XP_022159770.1 (trafficking protein particle complex subunit 1 [Momordica charantia] >XP_022159771.1 trafficking protein particle complex subunit 1 [Momordica charantia] >XP_022159772.1 trafficking protein particle complex subunit 1 [Momordica charantia] >XP_022159773.1 trafficking protein particle complex subunit 1 [Momordica charantia] >XP_022159774.1 trafficking protein particle complex subunit 1 [Momordica charantia]) HSP 1 Score: 342.8 bits (878), Expect = 1.7e-90 Identity = 160/169 (94.67%), Postives = 161/169 (95.27%), Query Frame = 0
BLAST of Sed0013201 vs. NCBI nr
Match: XP_022922155.1 (trafficking protein particle complex subunit 1-like [Cucurbita moschata] >XP_022922156.1 trafficking protein particle complex subunit 1-like [Cucurbita moschata] >XP_022922157.1 trafficking protein particle complex subunit 1-like [Cucurbita moschata] >XP_022973065.1 trafficking protein particle complex subunit 1-like [Cucurbita maxima] >XP_022973067.1 trafficking protein particle complex subunit 1-like [Cucurbita maxima] >XP_022973068.1 trafficking protein particle complex subunit 1-like [Cucurbita maxima] >XP_023549605.1 trafficking protein particle complex subunit 1-like [Cucurbita pepo subsp. pepo] >XP_023549606.1 trafficking protein particle complex subunit 1-like [Cucurbita pepo subsp. pepo] >XP_023549607.1 trafficking protein particle complex subunit 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 341.7 bits (875), Expect = 3.7e-90 Identity = 161/168 (95.83%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of Sed0013201 vs. ExPASy Swiss-Prot
Match: Q557G3 (Trafficking protein particle complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=trappc1-1 PE=3 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 6.9e-31 Identity = 60/147 (40.82%), Postives = 95/147 (64.63%), Query Frame = 0
BLAST of Sed0013201 vs. ExPASy Swiss-Prot
Match: Q5NCF2 (Trafficking protein particle complex subunit 1 OS=Mus musculus OX=10090 GN=Trappc1 PE=1 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 6.5e-29 Identity = 66/148 (44.59%), Postives = 95/148 (64.19%), Query Frame = 0
BLAST of Sed0013201 vs. ExPASy Swiss-Prot
Match: Q2KMM2 (Trafficking protein particle complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Trappc1 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 6.5e-29 Identity = 66/148 (44.59%), Postives = 95/148 (64.19%), Query Frame = 0
BLAST of Sed0013201 vs. ExPASy Swiss-Prot
Match: Q17QI1 (Trafficking protein particle complex subunit 1 OS=Bos taurus OX=9913 GN=TRAPPC1 PE=2 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.2e-28 Identity = 65/148 (43.92%), Postives = 94/148 (63.51%), Query Frame = 0
BLAST of Sed0013201 vs. ExPASy Swiss-Prot
Match: Q9Y5R8 (Trafficking protein particle complex subunit 1 OS=Homo sapiens OX=9606 GN=TRAPPC1 PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.2e-28 Identity = 65/148 (43.92%), Postives = 94/148 (63.51%), Query Frame = 0
BLAST of Sed0013201 vs. ExPASy TrEMBL
Match: A0A0A0KM26 (Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_5G139910 PE=3 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 2.8e-91 Identity = 161/168 (95.83%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of Sed0013201 vs. ExPASy TrEMBL
Match: A0A1S3AUA1 (Trafficking protein particle complex subunit OS=Cucumis melo OX=3656 GN=LOC103482924 PE=3 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 3.6e-91 Identity = 161/168 (95.83%), Postives = 161/168 (95.83%), Query Frame = 0
BLAST of Sed0013201 vs. ExPASy TrEMBL
Match: A0A6J1DZQ0 (Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=LOC111026095 PE=3 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 8.1e-91 Identity = 160/169 (94.67%), Postives = 161/169 (95.27%), Query Frame = 0
BLAST of Sed0013201 vs. ExPASy TrEMBL
Match: A0A6J1IAE9 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111471566 PE=3 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 1.8e-90 Identity = 161/168 (95.83%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of Sed0013201 vs. ExPASy TrEMBL
Match: A0A6J1E2F4 (Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111430218 PE=3 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 1.8e-90 Identity = 161/168 (95.83%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of Sed0013201 vs. TAIR 10
Match: AT1G51160.1 (SNARE-like superfamily protein ) HSP 1 Score: 319.7 bits (818), Expect = 1.4e-87 Identity = 146/169 (86.39%), Postives = 157/169 (92.90%), Query Frame = 0
BLAST of Sed0013201 vs. TAIR 10
Match: AT1G51160.2 (SNARE-like superfamily protein ) HSP 1 Score: 319.7 bits (818), Expect = 1.4e-87 Identity = 146/169 (86.39%), Postives = 157/169 (92.90%), Query Frame = 0
BLAST of Sed0013201 vs. TAIR 10
Match: AT5G02280.1 (SNARE-like superfamily protein ) HSP 1 Score: 75.5 bits (184), Expect = 4.6e-14 Identity = 43/145 (29.66%), Postives = 70/145 (48.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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