Sed0013199 (gene) Chayote v1

Overview


Name	Sed0013199
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Nodulin 22
Location	LG02: 49627171 .. 49630878 (+)
RNA-Seq Expression	Sed0013199
Synteny	Sed0013199

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCGTGTGGGAATCCCTACCCAAGCAACACGATTAGGACTACGCGTGAAGAGTGGTAAATGCTTTGTCCTTTTTACATTAATAATTTGTGATTCTCCCCCTTCTTTTTAATGGTTGTGATTGAAAGAGGGAAACCTTTATTTGACAACTTGATCATCACTTGATACAAATTTAGTAATTTTATAATCGCTTAAAAAGATGGAACAACCTTCTAACGTTTATAGAGTTTATAGGATGGTCTGTGATATGTCTATCACAGTCCATTAATTTTAAGATAGAATTCATGTTGATCCAATATATTTATTATATATTCTCTACCACATTTAATGGTGTAAAATTTCTCAGATAAAAGAGAGGTGAAAATATTTGTTGTATTTTTCTTTCTTCTTTTGAATAACAATATTTTTGGAGTATTGGAGATTCGAAATTAGAAAATTGGAAGTTTGTTCCACTATACTTAGAGTTACTATGCCCGCCCATAAATCAGGTATCGAGAAATATTAAAAGAATGATAACATTGTATTCAAATTAATGTTATAGGTGAATCTCGAAATCTAGGACCTTGAGAGAAACACCATCTTTAAAACTCATGTCTTCGATCATCGTGCCACTCTTTGGGGACGAGATTATTCATCATATTAATTGAGCTCTAATCTTGTTGACATTTTTCTTTAGTTATGAGACTGAACAGTTGAACACAAAAGGAATGATTTTATGGGTCAGTAGTTTTTTAAAGGGTAAATTATAAGTTTGATCTTTTTAATTGGAAAAAAAGTTAGAATTTAGTCTCTATAATTTTAAAAATTAGAATTTAATTTTTATGATTGGAAGAAAGTTAGAATTTAATCTCAATTATTTTAAATGCTAGATTGTTTTTTTTAAATCATTTAAAAGTTAAAATTTAATCCTTATGATTTGATAAATTCTAAAAATCATACTTATCATTTGTAATCGTTGGTGAATTGAGTACATGAAAATTAGTTATTCATTTGTCAATTATAACCAAGTGATTAATTGAACAAAAAATCATAGGAATAGCTAATTTTCACATATATAATTTATAGAGATTATGGACAACAAAGACTAAACTTTAGATTTTATCAAATCATAGAAATTAAGTTCTAATTTTTAAAATTATAAGGACTAAATTGTAACTTTTCTCCTAATATGAAAATTGAATTTAAATTTATGAAATTATAGAGATTAAATTTTAATTTTCCATAAAAGTATATAGACTAGCTTATAATTTACTTTTTGTATGGAAACTTTTATCAGTTTCGAATCTGAAGCATGCATAGTGCCGCAATAGATATCCAGACATAATTCAGAAACCCTACCTTCTCTTTTCTGTTTTTTTTTTTTTTTTTTAATTATTTTTTTATATAAAAAAAAAAATCAAAGTTAAAGTTTCAATAGTACAAGTAGGGCATGTGATTACTGTTGATCTAAGAATTTTTCTGTTTTCATTAAGCCATTTTTTGTCATATATTTTGTCGACACAGGGTCTAGGTTATATGTTCATGGTTTATACTAAATATTATTTGTTCTAGTACTTTTATTTTTGTGTTAATTTCTCAAATATTTTAAGATGTTTTTACCTTTGATTGTGTTTTGATGTATTAATTTTCATAATCTTTGTTGTTTTTATCAATGCTAAAGATAACGAAATATGTGATGGTTGATATGTAGGTTGATGTGACACTGATGTAATCAGCTAACAATTCTTATCGCTAAACTTCATTGAGGTTAGTAAATAAAGTACATGGATGGAATTTGCTAAACCTGTTTTAATTATTAAACTACTTGGTGCCTCAACCCACGTCACTATTTATTGAAAAAAAGGAATAAATCTCTTAAATAATATCATACCATTAATCTATTATAACAATGAAGGAAAAAGTACAAAAGAGAGTAAAAACAAAAGGGGTGTTTGTTTGGCATATTTATGAAGGATTTAAATGGAATAATTTATTAATTCTTCTTCTTCTTTTTTTATTATTAAAAATAACCTACTCATTTTTTTATCATTCATTTTAAATTAATCAAAATAAATCATTTAAAATGACTTATTTTTAATTATTTACTTTTAACTATTCAAAATAATTACTCATTTTAGATTTATATCAAAATAAGATTTTGATTCTAAGGGGTTGTTTGTTTGACGTTTTTAGCTAAAGAGTTAAGATTAGGATTTATTAACTCTTCTTCGAAAATCTACATCCAAACGAGTTTTTACCAACTCTTCCTCAATTTTACTATTGAAAATAACTCTCATTTCTAACCATTCATTTTTAATCATTGATTTTTAATCATTTCTAACTATTCATTTTTAATCATTCCTTTCAAACTAATCAAAATAACTTATTTTTAATCACTCATTTTTAATAATTTCTTTTTTAATTATTAAAAATAACTACTTATTTTAAATCAACATCTAAACAAGGTTTTGATTATAACTCTTCTACACAAAAACTACATCGAAACAAGTTTTTGGCACAACTCTCAATTTTTAACTACTCAATATAACTCCTTGACCTAAATATGTCAAACAAATTTAACTCCTCATGCTAAATCTTCCCTATAGTCAACAAGCACCCCCAAAAAGATTTAATTTAATTTGGATTAAATTTTACAAATCACAGAAGAAAAATTGAATTAAATTTTATATATTTTTTTAAAAAAACTCTATCTGGAATTTGTCTAAAATAATATGACCGACCTTGTAATTTCATAGAAATTGAAGGTTGAGGATAGAAATTAAAAATAAAAAAATAAAAAAATAAAAAAAAAATAAAAAACTTTCCCGTCCTTTTTATCTGCTTGAGAGATTCTCTGCTCTGGGCTCTCACGGCTCTCCCTTTTCATTCTCTTCCTTCGTTTGGATTCAACTTCCCAAATCCCTCAATCATATAATCCTCTCTTTCAATCCCCATTTCTGAAAAATTAGGGTTCTTATCCAATTTCTGTTTCCCCAAACCAATTCGTTTGATTCCTTTTATAATTCTTCGTTTTTGTTCTCTGAACAGAAACCCCATCAAGATTTCGATTCTGTTTGATATCCCACCGTCTTTTTTCCCTTTGATTTCCCTCTTAATTTCGGTTCCAGCCCTAGTTGTTGTTGTTGTTGTTGTGAAGAAGAAGAAGGAGCTCGAAATCAACCCGACCGCCACCGCCACCGCCACCGCCACCACCGCCATGAAGGTGCACCCATTGCCGAGGAAGCGAAATATCGCCATCCGAAACAACCCCAATTCGAGACTCTCTCTCGAAGATCAACCCCTTCTGAACCACAAGAATCTCAGGAGATTACCCCATATCTTCAGTCGGGTCCTCGAGCTTCCGTTTCGATCCGATGCCGATGTCTTAGTGCAGGAGAATCCGGATTGTTTTCGGTTCATTGCTGAGACTGATGGTAATATGAGCGATGGAATAAGGGCTCATGCTGTGGAAATCCATCCTGGGGTTGTTAAGATCGTCGTGCGTGAAAATGAATCGTTGGAAATGGCATTGGATGAGCTCGAATTGGATATGTGGAGGTTTCGGCTGCCCGAGACGACTCGGCCCGAGCTTGCGAGTGCGGCCTTTGTGGATGGAGAGCTTATAGTTACTGTTCCAAAGGGGACTGAGGAGGAGAATTCTGAAGATGGTGGTGGAGGAGATATCTGCGGAGATGGAATGGAAGGGCGGCTTGTTCTTGTACAGTAA

mRNA sequence

ATGTGGCGTGTGGGAATCCCTACCCAAGCAACACGATTAGGACTACGCGTGAAGAGTGCCCTAGTTGTTGTTGTTGTTGTTGTGAAGAAGAAGAAGGAGCTCGAAATCAACCCGACCGCCACCGCCACCGCCACCGCCACCACCGCCATGAAGGTGCACCCATTGCCGAGGAAGCGAAATATCGCCATCCGAAACAACCCCAATTCGAGACTCTCTCTCGAAGATCAACCCCTTCTGAACCACAAGAATCTCAGGAGATTACCCCATATCTTCAGTCGGGTCCTCGAGCTTCCGTTTCGATCCGATGCCGATGTCTTAGTGCAGGAGAATCCGGATTGTTTTCGGTTCATTGCTGAGACTGATGGTAATATGAGCGATGGAATAAGGGCTCATGCTGTGGAAATCCATCCTGGGGTTGTTAAGATCGTCGTGCGTGAAAATGAATCGTTGGAAATGGCATTGGATGAGCTCGAATTGGATATGTGGAGGTTTCGGCTGCCCGAGACGACTCGGCCCGAGCTTGCGAGTGCGGCCTTTGTGGATGGAGAGCTTATAGTTACTGTTCCAAAGGGGACTGAGGAGGAGAATTCTGAAGATGGTGGTGGAGGAGATATCTGCGGAGATGGAATGGAAGGGCGGCTTGTTCTTGTACAGTAA

Coding sequence (CDS)

ATGTGGCGTGTGGGAATCCCTACCCAAGCAACACGATTAGGACTACGCGTGAAGAGTGCCCTAGTTGTTGTTGTTGTTGTTGTGAAGAAGAAGAAGGAGCTCGAAATCAACCCGACCGCCACCGCCACCGCCACCGCCACCACCGCCATGAAGGTGCACCCATTGCCGAGGAAGCGAAATATCGCCATCCGAAACAACCCCAATTCGAGACTCTCTCTCGAAGATCAACCCCTTCTGAACCACAAGAATCTCAGGAGATTACCCCATATCTTCAGTCGGGTCCTCGAGCTTCCGTTTCGATCCGATGCCGATGTCTTAGTGCAGGAGAATCCGGATTGTTTTCGGTTCATTGCTGAGACTGATGGTAATATGAGCGATGGAATAAGGGCTCATGCTGTGGAAATCCATCCTGGGGTTGTTAAGATCGTCGTGCGTGAAAATGAATCGTTGGAAATGGCATTGGATGAGCTCGAATTGGATATGTGGAGGTTTCGGCTGCCCGAGACGACTCGGCCCGAGCTTGCGAGTGCGGCCTTTGTGGATGGAGAGCTTATAGTTACTGTTCCAAAGGGGACTGAGGAGGAGAATTCTGAAGATGGTGGTGGAGGAGATATCTGCGGAGATGGAATGGAAGGGCGGCTTGTTCTTGTACAGTAA

Protein sequence

MWRVGIPTQATRLGLRVKSALVVVVVVVKKKKELEINPTATATATATTAMKVHPLPRKRNIAIRNNPNSRLSLEDQPLLNHKNLRRLPHIFSRVLELPFRSDADVLVQENPDCFRFIAETDGNMSDGIRAHAVEIHPGVVKIVVRENESLEMALDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKGTEEENSEDGGGGDICGDGMEGRLVLVQ

Homology

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BLAST of Sed0013199 vs. NCBI nr
Match: XP_022979495.1 (uncharacterized protein LOC111479182 [Cucurbita maxima])

HSP 1 Score: 306.2 bits (783), Expect = 2.2e-79
Identity = 161/199 (80.90%), Postives = 172/199 (86.43%), Query Frame = 0


Query: 20  ALVVVVVVVKKKKELEINPTATATATATTAMKVHPLPRKRNIAIRNNPNSRLSLEDQPLL 79
           ALV +   +   +ELEIN         TTAMKVHPLPRKRNIA+RNNPNSR SLEDQ LL
Sbjct: 29  ALVALSEPIASVEELEIN--------TTTAMKVHPLPRKRNIAVRNNPNSRNSLEDQSLL 88

Query: 80  NHKNLRRLPHIFSRVLELPFRSDADVLVQENPDCFRFIAETDGNMSDGIRAHAVEIHPGV 139
           NHK LRRLPH+FSRVLELPFRSDADVLV+ENPDCFRFIAETDGN+SDG+RAHAVEIHPGV
Sbjct: 89  NHKKLRRLPHVFSRVLELPFRSDADVLVEENPDCFRFIAETDGNISDGVRAHAVEIHPGV 148

Query: 140 VKIVVRENESLEMALDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKGTEEENSED 199
           +KIVVRE  SLEM +DELELDMWRFRLPETTRPELASAAFVDGELIVTVPKG  EENS+D
Sbjct: 149 IKIVVRETASLEMTMDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKG-NEENSDD 208

Query: 200 GGGGDICGDGMEGRLVLVQ 219
            GGGDI GD MEGRLVLVQ
Sbjct: 209 -GGGDIWGDEMEGRLVLVQ 217

[Close]

BLAST of Sed0013199 vs. NCBI nr
Match: KAG6582302.1 (hypothetical protein SDJN03_22304, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018714.1 hypothetical protein SDJN02_20585, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.1 bits (780), Expect = 5.0e-79
Identity = 161/199 (80.90%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 20  ALVVVVVVVKKKKELEINPTATATATATTAMKVHPLPRKRNIAIRNNPNSRLSLEDQPLL 79
           ALV     +   +ELEIN         TTAMKVHPLPRKRNIA+RNNPNSR SLEDQ LL
Sbjct: 29  ALVASSEPIASVEELEIN--------TTTAMKVHPLPRKRNIAVRNNPNSRNSLEDQSLL 88

Query: 80  NHKNLRRLPHIFSRVLELPFRSDADVLVQENPDCFRFIAETDGNMSDGIRAHAVEIHPGV 139
           NHK LRRLPH+FSRVLELPFRSDADVLV+ENPDCFRFIAETDGN+SDG+RAHAVEIHPGV
Sbjct: 89  NHKKLRRLPHVFSRVLELPFRSDADVLVEENPDCFRFIAETDGNISDGVRAHAVEIHPGV 148

Query: 140 VKIVVRENESLEMALDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKGTEEENSED 199
           +KIVVRE  SLEM +DELELDMWRFRLPETTRPELASAAFVDGELIVTVPKG  EENS+D
Sbjct: 149 IKIVVRETASLEMTMDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKG-NEENSDD 208

Query: 200 GGGGDICGDGMEGRLVLVQ 219
            GGGDI GD MEGRLVLVQ
Sbjct: 209 -GGGDIWGDEMEGRLVLVQ 217

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BLAST of Sed0013199 vs. NCBI nr
Match: XP_023527185.1 (uncharacterized protein LOC111790497 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-78
Identity = 160/199 (80.40%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 20  ALVVVVVVVKKKKELEINPTATATATATTAMKVHPLPRKRNIAIRNNPNSRLSLEDQPLL 79
           ALV     +   +ELEIN         TTAMKVHPLPRKRNIA+RNNPNSR SLEDQ LL
Sbjct: 29  ALVASSEPIASVEELEIN--------TTTAMKVHPLPRKRNIAVRNNPNSRNSLEDQSLL 88

Query: 80  NHKNLRRLPHIFSRVLELPFRSDADVLVQENPDCFRFIAETDGNMSDGIRAHAVEIHPGV 139
           NHK LRRLPH+FSRVLELPFRSDADVLV+ENPDCFRFIAETDGN+SDG+RAHAVEIHPGV
Sbjct: 89  NHKKLRRLPHVFSRVLELPFRSDADVLVEENPDCFRFIAETDGNISDGVRAHAVEIHPGV 148

Query: 140 VKIVVRENESLEMALDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKGTEEENSED 199
           +KIVVRE  SLEM +DELELDMWRFRLPETTRPELASA FVDGELIVTVPKG  EENS+D
Sbjct: 149 IKIVVRETSSLEMTMDELELDMWRFRLPETTRPELASAVFVDGELIVTVPKG-NEENSDD 208

Query: 200 GGGGDICGDGMEGRLVLVQ 219
            GGGDI GD MEGRLVLVQ
Sbjct: 209 -GGGDIWGDEMEGRLVLVQ 217

[Close]

BLAST of Sed0013199 vs. NCBI nr
Match: XP_022956078.1 (uncharacterized protein LOC111457880 [Cucurbita moschata])

HSP 1 Score: 303.1 bits (775), Expect = 1.9e-78
Identity = 160/199 (80.40%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 20  ALVVVVVVVKKKKELEINPTATATATATTAMKVHPLPRKRNIAIRNNPNSRLSLEDQPLL 79
           ALV     +   +ELEIN         TTAMKVHPLPRKRNIA+RNNPNSR SLEDQ LL
Sbjct: 29  ALVASSEPIASVEELEIN--------TTTAMKVHPLPRKRNIAVRNNPNSRNSLEDQSLL 88

Query: 80  NHKNLRRLPHIFSRVLELPFRSDADVLVQENPDCFRFIAETDGNMSDGIRAHAVEIHPGV 139
           NHK LRRLPH+FSRVLELPFRSDADVLV+ENPDCFRFIAETDG++SDG+RAHAVEIHPGV
Sbjct: 89  NHKKLRRLPHVFSRVLELPFRSDADVLVEENPDCFRFIAETDGDISDGVRAHAVEIHPGV 148

Query: 140 VKIVVRENESLEMALDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKGTEEENSED 199
           +KIVVRE  SLEM +DELELDMWRFRLPETTRPELASAAFVDGELIVTVPKG  EENS+D
Sbjct: 149 IKIVVRETASLEMTMDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKG-NEENSDD 208

Query: 200 GGGGDICGDGMEGRLVLVQ 219
            GGGDI GD MEGRLVLVQ
Sbjct: 209 -GGGDIWGDEMEGRLVLVQ 217

[Close]

BLAST of Sed0013199 vs. NCBI nr
Match: XP_008438664.1 (PREDICTED: uncharacterized protein LOC103483704 [Cucumis melo] >KAA0049357.1 nodulin 22 [Cucumis melo var. makuwa])

HSP 1 Score: 299.7 bits (766), Expect = 2.1e-77
Identity = 164/210 (78.10%), Postives = 173/210 (82.38%), Query Frame = 0


Query: 21  LVVVVVVV-----------KKKKELEINPTATATATATTAMKVHPLPRKRNIAIRNNPNS 80
           LV VVVVV             K E EIN        +TT MKVHPLPRKRNIA+RNNP S
Sbjct: 41  LVFVVVVVGVSPAPSKSIATLKNEFEIN--------STTVMKVHPLPRKRNIAVRNNPTS 100

Query: 81  RLSLEDQ-PLLNHKNLRRLPHIFSRVLELPFRSDADVLVQENPDCFRFIAETDGNMSDGI 140
           R SLEDQ PL NHK LRRLPHIFSRVLELPFRSDADVLV+EN DCFRFIA TDGN+SDG+
Sbjct: 101 RNSLEDQSPLNNHKKLRRLPHIFSRVLELPFRSDADVLVEENTDCFRFIAVTDGNISDGV 160

Query: 141 RAHAVEIHPGVVKIVVRENESLEMALDELELDMWRFRLPETTRPELASAAFVDGELIVTV 200
           RAHAVEIHPGV+KIVVRENESLEMA+DELELDMWRFRLPETTRPELASAAFVDGELIVTV
Sbjct: 161 RAHAVEIHPGVIKIVVRENESLEMAIDELELDMWRFRLPETTRPELASAAFVDGELIVTV 220

Query: 201 PKGTEEENSEDGGGGDICGDGMEGRLVLVQ 219
           PKG +EENS+D GGGDI  D MEGRLVLVQ
Sbjct: 221 PKGNDEENSDD-GGGDIFRDEMEGRLVLVQ 241

[Close]

BLAST of Sed0013199 vs. ExPASy TrEMBL
Match: A0A6J1ITF0 (uncharacterized protein LOC111479182 OS=Cucurbita maxima OX=3661 GN=LOC111479182 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.1e-79
Identity = 161/199 (80.90%), Postives = 172/199 (86.43%), Query Frame = 0


Query: 20  ALVVVVVVVKKKKELEINPTATATATATTAMKVHPLPRKRNIAIRNNPNSRLSLEDQPLL 79
           ALV +   +   +ELEIN         TTAMKVHPLPRKRNIA+RNNPNSR SLEDQ LL
Sbjct: 29  ALVALSEPIASVEELEIN--------TTTAMKVHPLPRKRNIAVRNNPNSRNSLEDQSLL 88

Query: 80  NHKNLRRLPHIFSRVLELPFRSDADVLVQENPDCFRFIAETDGNMSDGIRAHAVEIHPGV 139
           NHK LRRLPH+FSRVLELPFRSDADVLV+ENPDCFRFIAETDGN+SDG+RAHAVEIHPGV
Sbjct: 89  NHKKLRRLPHVFSRVLELPFRSDADVLVEENPDCFRFIAETDGNISDGVRAHAVEIHPGV 148

Query: 140 VKIVVRENESLEMALDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKGTEEENSED 199
           +KIVVRE  SLEM +DELELDMWRFRLPETTRPELASAAFVDGELIVTVPKG  EENS+D
Sbjct: 149 IKIVVRETASLEMTMDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKG-NEENSDD 208

Query: 200 GGGGDICGDGMEGRLVLVQ 219
            GGGDI GD MEGRLVLVQ
Sbjct: 209 -GGGDIWGDEMEGRLVLVQ 217

[Close]

BLAST of Sed0013199 vs. ExPASy TrEMBL
Match: A0A6J1GVS7 (uncharacterized protein LOC111457880 OS=Cucurbita moschata OX=3662 GN=LOC111457880 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 9.2e-79
Identity = 160/199 (80.40%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 20  ALVVVVVVVKKKKELEINPTATATATATTAMKVHPLPRKRNIAIRNNPNSRLSLEDQPLL 79
           ALV     +   +ELEIN         TTAMKVHPLPRKRNIA+RNNPNSR SLEDQ LL
Sbjct: 29  ALVASSEPIASVEELEIN--------TTTAMKVHPLPRKRNIAVRNNPNSRNSLEDQSLL 88

Query: 80  NHKNLRRLPHIFSRVLELPFRSDADVLVQENPDCFRFIAETDGNMSDGIRAHAVEIHPGV 139
           NHK LRRLPH+FSRVLELPFRSDADVLV+ENPDCFRFIAETDG++SDG+RAHAVEIHPGV
Sbjct: 89  NHKKLRRLPHVFSRVLELPFRSDADVLVEENPDCFRFIAETDGDISDGVRAHAVEIHPGV 148

Query: 140 VKIVVRENESLEMALDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKGTEEENSED 199
           +KIVVRE  SLEM +DELELDMWRFRLPETTRPELASAAFVDGELIVTVPKG  EENS+D
Sbjct: 149 IKIVVRETASLEMTMDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKG-NEENSDD 208

Query: 200 GGGGDICGDGMEGRLVLVQ 219
            GGGDI GD MEGRLVLVQ
Sbjct: 209 -GGGDIWGDEMEGRLVLVQ 217

[Close]

BLAST of Sed0013199 vs. ExPASy TrEMBL
Match: A0A5A7U4T4 (Nodulin 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G006010 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.0e-77
Identity = 164/210 (78.10%), Postives = 173/210 (82.38%), Query Frame = 0


Query: 21  LVVVVVVV-----------KKKKELEINPTATATATATTAMKVHPLPRKRNIAIRNNPNS 80
           LV VVVVV             K E EIN        +TT MKVHPLPRKRNIA+RNNP S
Sbjct: 41  LVFVVVVVGVSPAPSKSIATLKNEFEIN--------STTVMKVHPLPRKRNIAVRNNPTS 100

Query: 81  RLSLEDQ-PLLNHKNLRRLPHIFSRVLELPFRSDADVLVQENPDCFRFIAETDGNMSDGI 140
           R SLEDQ PL NHK LRRLPHIFSRVLELPFRSDADVLV+EN DCFRFIA TDGN+SDG+
Sbjct: 101 RNSLEDQSPLNNHKKLRRLPHIFSRVLELPFRSDADVLVEENTDCFRFIAVTDGNISDGV 160

Query: 141 RAHAVEIHPGVVKIVVRENESLEMALDELELDMWRFRLPETTRPELASAAFVDGELIVTV 200
           RAHAVEIHPGV+KIVVRENESLEMA+DELELDMWRFRLPETTRPELASAAFVDGELIVTV
Sbjct: 161 RAHAVEIHPGVIKIVVRENESLEMAIDELELDMWRFRLPETTRPELASAAFVDGELIVTV 220

Query: 201 PKGTEEENSEDGGGGDICGDGMEGRLVLVQ 219
           PKG +EENS+D GGGDI  D MEGRLVLVQ
Sbjct: 221 PKGNDEENSDD-GGGDIFRDEMEGRLVLVQ 241

[Close]

BLAST of Sed0013199 vs. ExPASy TrEMBL
Match: A0A1S3AXL9 (uncharacterized protein LOC103483704 OS=Cucumis melo OX=3656 GN=LOC103483704 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.0e-77
Identity = 164/210 (78.10%), Postives = 173/210 (82.38%), Query Frame = 0


Query: 21  LVVVVVVV-----------KKKKELEINPTATATATATTAMKVHPLPRKRNIAIRNNPNS 80
           LV VVVVV             K E EIN        +TT MKVHPLPRKRNIA+RNNP S
Sbjct: 41  LVFVVVVVGVSPAPSKSIATLKNEFEIN--------STTVMKVHPLPRKRNIAVRNNPTS 100

Query: 81  RLSLEDQ-PLLNHKNLRRLPHIFSRVLELPFRSDADVLVQENPDCFRFIAETDGNMSDGI 140
           R SLEDQ PL NHK LRRLPHIFSRVLELPFRSDADVLV+EN DCFRFIA TDGN+SDG+
Sbjct: 101 RNSLEDQSPLNNHKKLRRLPHIFSRVLELPFRSDADVLVEENTDCFRFIAVTDGNISDGV 160

Query: 141 RAHAVEIHPGVVKIVVRENESLEMALDELELDMWRFRLPETTRPELASAAFVDGELIVTV 200
           RAHAVEIHPGV+KIVVRENESLEMA+DELELDMWRFRLPETTRPELASAAFVDGELIVTV
Sbjct: 161 RAHAVEIHPGVIKIVVRENESLEMAIDELELDMWRFRLPETTRPELASAAFVDGELIVTV 220

Query: 201 PKGTEEENSEDGGGGDICGDGMEGRLVLVQ 219
           PKG +EENS+D GGGDI  D MEGRLVLVQ
Sbjct: 221 PKGNDEENSDD-GGGDIFRDEMEGRLVLVQ 241

[Close]

BLAST of Sed0013199 vs. ExPASy TrEMBL
Match: A0A0A0LA89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146610 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 5.0e-77
Identity = 162/223 (72.65%), Postives = 178/223 (79.82%), Query Frame = 0


Query: 8   TQATRLGLRVKSALVVVVVV-----------VKKKKELEINPTATATATATTAMKVHPLP 67
           T+A+ + L +    +V +VV              K E EIN        +TTAMKVHPLP
Sbjct: 27  TRASSISLSIWVLTLVFIVVGGVSPAPSKPIASLKNEFEIN--------STTAMKVHPLP 86

Query: 68  RKRNIAIRNNPNSRLSLEDQPLL-NHKNLRRLPHIFSRVLELPFRSDADVLVQENPDCFR 127
           RKRNIA+RNN   R SLEDQ LL NHK LRRLPHIFSRVLELPFRSDADVLV+ENPDCFR
Sbjct: 87  RKRNIAVRNNTTLRNSLEDQSLLNNHKKLRRLPHIFSRVLELPFRSDADVLVEENPDCFR 146

Query: 128 FIAETDGNMSDGIRAHAVEIHPGVVKIVVRENESLEMALDELELDMWRFRLPETTRPELA 187
           FIAETDGN+SDG+RAHAVEIHPGV+KIVVRENESLEM++DELELDMWRFRLPETTRPELA
Sbjct: 147 FIAETDGNISDGVRAHAVEIHPGVIKIVVRENESLEMSIDELELDMWRFRLPETTRPELA 206

Query: 188 SAAFVDGELIVTVPKGTEEENSEDGGGGDICGDGMEGRLVLVQ 219
           SAAFVDGELIVTVPKG +E NS+D GGGDI  D MEGRLVLVQ
Sbjct: 207 SAAFVDGELIVTVPKGNDEGNSDD-GGGDIFRDEMEGRLVLVQ 240

[Close]

BLAST of Sed0013199 vs. TAIR 10
Match: AT3G22530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-47
Identity = 106/175 (60.57%), Postives = 129/175 (73.71%), Query Frame = 0


Query: 49  AMKVHPLPRKRNIAIRNNPNSRLSLEDQPLLNHKNLRRLPHIFSRVLELPFRSDADVLVQ 108
           AM+VHP+PR  N  + ++ +   + E       KNLRRLPHIF+RVLELP RS+ADV V+
Sbjct: 31  AMRVHPIPRNINNTLIHHHHHNPTREP-----GKNLRRLPHIFNRVLELPLRSEADVAVE 90

Query: 109 ENPDCFRFIAETDG--NMSDGIRAHAVEIHPGVVKIVVREN--ESLEMALDELELDMWRF 168
           E  DCFRF+AET G  N    +RA+ VEIHPG+ KIVVR N   SL ++LDELELD+WRF
Sbjct: 91  ERHDCFRFVAETVGLCNGDGEMRAYMVEIHPGITKIVVRTNGSSSLGLSLDELELDVWRF 150

Query: 169 RLPETTRPELASAAFVDGELIVTVPKGTEEENSEDGGGGDICGDGM-EGRLVLVQ 219
           RLPE+TRPEL + A VDG+LIVTVPK  EEE+ +DGGGGD  G G+  GRLVLVQ
Sbjct: 151 RLPESTRPELVTVACVDGDLIVTVPKNAEEED-DDGGGGDF-GQGIGSGRLVLVQ 198

[Close]

BLAST of Sed0013199 vs. TAIR 10
Match: AT4G14830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22530.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-41
Identity = 93/153 (60.78%), Postives = 107/153 (69.93%), Query Frame = 0


Query: 50  MKVHPLPRKRNIAIRNNPNSRLSLEDQPLLNHKNLRRLPHIFSRVLELPFRSDADVLVQE 109
           MK+HPLPR       NN N      D      K LRRLPHIFSRVLELP +SDADV V+E
Sbjct: 1   MKIHPLPRN-----ENNNNLIHHARDPTREPGKKLRRLPHIFSRVLELPLKSDADVAVEE 60

Query: 110 NPDCFRFIAETDGNMSDGIRAHAVEIHPGVVKIVVREN--ESLEMALDELELDMWRFRLP 169
           + DCFRF+AETDG    G+RA+ VEIHPGV KI+VR N   SL ++LDELELD+WRFRLP
Sbjct: 61  SHDCFRFVAETDGGGGGGVRAYMVEIHPGVTKILVRTNGSSSLGLSLDELELDVWRFRLP 120

Query: 170 ETTRPELASA-AFVDGELIVTVPKGTEEENSED 200
           E+TRPEL +     DGELIVTVPK   E+N  D
Sbjct: 121 ESTRPELVTVDCDGDGELIVTVPK--IEDNGRD 146

The following BLAST results are available for this feature:

BLAST of Sed0013199 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022979495.1	2.2e-79	80.90	uncharacterized protein LOC111479182 [Cucurbita maxima]	[more]
KAG6582302.1	5.0e-79	80.90	hypothetical protein SDJN03_22304, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023527185.1	1.1e-78	80.40	uncharacterized protein LOC111790497 [Cucurbita pepo subsp. pepo]	[more]
XP_022956078.1	1.9e-78	80.40	uncharacterized protein LOC111457880 [Cucurbita moschata]	[more]
XP_008438664.1	2.1e-77	78.10	PREDICTED: uncharacterized protein LOC103483704 [Cucumis melo] >KAA0049357.1 nod...	[more]

BLAST of Sed0013199 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0013199 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ITF0	1.1e-79	80.90	uncharacterized protein LOC111479182 OS=Cucurbita maxima OX=3661 GN=LOC111479182...	[more]
A0A6J1GVS7	9.2e-79	80.40	uncharacterized protein LOC111457880 OS=Cucurbita moschata OX=3662 GN=LOC1114578...	[more]
A0A5A7U4T4	1.0e-77	78.10	Nodulin 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G006010 PE...	[more]
A0A1S3AXL9	1.0e-77	78.10	uncharacterized protein LOC103483704 OS=Cucumis melo OX=3656 GN=LOC103483704 PE=...	[more]
A0A0A0LA89	5.0e-77	72.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146610 PE=4 SV=1	[more]

BLAST of Sed0013199 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22530.1	1.8e-47	60.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G14830.1	1.5e-41	60.78	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 140..160
None	No IPR available	PANTHER	PTHR33879	17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED	coord: 50..218
None	No IPR available	CDD	cd00298	ACD_sHsps_p23-like	coord: 107..190 e-value: 5.98663E-5 score: 38.3391

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013199.1	Sed0013199.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane