
Sed0012986 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAGTTTTGCTTAGATGCCATATTCATCAGCCTCAGTGTGTTGCTTGTGATGGGATATCACGCCTATCTATGGCTACGCTGGAAGAAGAAACCAGAGAAGACAACCATGGGAGTTCAATGGGAGCATCGGCGAACGTGGCTCGAGAAGACGCTGCTGGGCCATGACAGCATGCAGGTTCCTAAAGTGTTTGATATTGTCAAATTTATCTTAGTCTATCCGTTTAAGCCTTCTAAGTTAATGGGTGATCTAACATGTGTTTAGAGAAGGAAGTCATATGTTCAAACTTAAATGAAATCGTTTCCTCTTTAATTAATATCAATTTATGCTGGTTGGGTTCCGGTGAAAATTTAACATTGAAAAGTGAAATCTCCTAATAATGTATAAGATAGGTGAGTTAATACTCTCGTTACCAATTAATTGATGCATACAATATCTTATAAGTTAAAATTTTCCTAGGACGATTCTTTGTTCCACAATCTAGATTTACTTACAACTAGTTAATTAAGAATGCATTTTTATGCTTGTTATCGGTTCTCTTGTAAGGGGGTAAATTGTGAAACTTAGTCCTTTTCAAAAACTTTTTGTGAAAATGTGTCTAGGGAAGAGATTTTCTAAAAATGGGTTGTGGCGCCTTTGGTAAAGACGCCACATCCATTGATTACAGTCAATTCTTTTTGTTTTATGTGTGTAGAGACGCCACATGCCTTCCAAAATCTTTCCGTTACAATATTTCTAAGTTTCCTTTTATTTACTTTTTCTTATAGATATTTTTTCTTTTCAATATCTTTCAATTTGTTATATGAAATTGTATTTCAACTAAAATCCCACAAATCAAGAATATTCAATTTGCATTTTTTTAAAAACATGACATTTCATGGTTTTATTATTATCCTAAAATATTATTAATTTAAATAAAAGAAAATTTATATAGATATTTTTATGATAATGTAATTTATCCTAGATGAGTATAATTTTAAAAAAATGCAAATGAAAACTTCTCCATTTGTGTTATTTTGGTTGAAATAATATTTTATATATCAATTAATTTAATAAAATCTTATTTAAATTTGTTAGAAAACTTATTAGATTTAAGGAGAAAATACCAATCTTTTTCAAAAAAAAAAAAAATCACCAAATTTTAAAATCTTATTAAATTGTATGGGCATTATCATGATAATGTTAATATAAAAATAGAGATCAAATTTATTATTAGGTTAGAGTTGTAGTGTTATCCTTTTTTAATTAAATTTATAAAATAATTTTTTATATTAAAATTAAATACATCTTCCTCCCCACTTTCAAATATATATATATATAAAAGATTTTCTTTATAGAAAAATATATCTTTTCCCTCTCCTTTCTCTATTGAGATTTTTTTTTAAATTTTGTTATAATCTTTTATTATAAAAGAGAACTTTTAAATTTTCCAAAATCTTTGTTGGAAAATAAAAAGATAAATCTCAATTTAACAAGGAATTAAAAAAAAATGTCAATTTGAATTTCAAAATTCTACCGAGATTGAGGTAGTTATTATTTTTCAATTTATATGGATGGGATTTTTTTATTTTATTTTTTATTTTTATTTAGGTAGTTTAAGTTTTCATAAACAATATTCATATAAAGTCTCTTTTATTTAAACTAATAATAATAAATTCGTGTGATCATGATTTTAAAAAAATTAAAATTAAAGTTTTTTAATCGGTTGAATTTTAGTTGAAATTATATTTTATATCTCACTTTAATTTAGTAAAATTTAGTAAACAACTAATAAGAAAATGTCATTTTAAAATAAACTTAAATTTAAAATCTTATCTTTTCAAAAAAATATATATATATATATATTAAAATATCTAAGCACTACTATAATAACGTTTTTTTTTTGAAATCTTTACTATAATATCGTTAATTTAAGAATACATGTCAATTAATTATTAGGTTATAATTTTAATGATACTTTTTCATAAAAAGTATGGTAGAATATTTTTTACTGTAAAATAATTTTTTTATTAAAGTTAAATAATTTAGATTTTACTATTTTTAATTATTTTGAAGAATTTTTGTTTAAGAAACAAAATATTCTTATAAAAATAAAATGATTAATTAATCATATTTAGTTTTAATATTGAAATTTAGAAAGAGAAAAAAATCTTCAAAAGAAGAAGAAAAAGAAAAAATAAAAGAGCATTGTAACATAAAGATTTTAGACTTCATGTGGCGTCTCTTGTAGAGACGCCACCACATAAGACAAAAATAGTTGACTGCTTTGAAAGGGTGTGACATCTCTACTAAAGATGCCAAAACCCATTTTCACAAATTCTTTTTCATTACATCCATTTTCATAGAAAGTTTTTTAAAACGACCCATTTTTACAATTTACCCCCTACAAGGCCACAGCTAATGGGAAGAAAACTTTTTTTTATATGAGAAACTTACGAGATTAGTCAAATCTATAATATATAGTCATTTTAAAAAATTAGCAAAAATAATTATTAGTATTAATGAATATTGTAACATTCTTTCTTATAATATTGTATTGATAAATATTTATAATACAATATATTGATATTAATCAATATTTATAATATAGTATTAAAATGTATTAATGATTATGAATATAAATATTTTAAAATTTCATTATATTTATAATAACTTTATGAAAATATTTTTAGTAATATTTGTATTTGCTCTTCTATTCCATCCAAACTAACAACTCTGAGGAAGAATTACTAGGTAAAACAAAAACAAAACACGCTTATTCAGTTTAGATGTATACTACGGAATTTAACCTTTAAGCCTATAACTAAAGGAGAGTGTTAAAATTTTCATATATTTAAATTTTTCGTTTGAATTAATTAATGATTTAATGTGATGATTTAATAAAGGTAGTACAGACCTTAAGAAACAATCTCATGATCATAATTCTGAGAGCTTCAATATCAATCGCGGTATCCACTTCTGTAGCAGCCCTCACAAACAACGCATACAAAGCTGCAAATAAATATCAAGGACTGTTACTTGGAACTCAATCTAGCACTGGGATGTTGTTTGTTGTGAAATTTGCTGTTGCATTTGCAGTGTCGATGTCGAGCTTCATCTGTAGCTCGTTTGGGGTTGGGTTTCTGATCGACGCCTGCGTGTTGGTCAGCAGTGCGGCAAGCAGTAGCGGCCATGTTCAGAGGCTGGCAGACACAGGATTCACCTTGGCTTTTATAGGGAACCGCCTGATGTGGCTCAGTTTTGTTGTGTTGTTATGGTCACTTGGTCCTATTGTTGTGGTCCTCTGTTCCTTGGCTCTAGTTTGTGGGTTTTCTACCATGGACTTTTGCAGCCAAATCAGTAAGATTAATAATTCACACTGA ATGGAAGAGTTTTGCTTAGATGCCATATTCATCAGCCTCAGTGTGTTGCTTGTGATGGGATATCACGCCTATCTATGGCTACGCTGGAAGAAGAAACCAGAGAAGACAACCATGGGAGTTCAATGGGAGCATCGGCGAACGTGGCTCGAGAAGACGCTGCTGGGCCATGACAGCATGCAGGTAGTACAGACCTTAAGAAACAATCTCATGATCATAATTCTGAGAGCTTCAATATCAATCGCGGTATCCACTTCTGTAGCAGCCCTCACAAACAACGCATACAAAGCTGCAAATAAATATCAAGGACTGTTACTTGGAACTCAATCTAGCACTGGGATGTTGTTTGTTGTGAAATTTGCTGTTGCATTTGCAGTGTCGATGTCGAGCTTCATCTGTAGCTCGTTTGGGGTTGGGTTTCTGATCGACGCCTGCGTGTTGGTCAGCAGTGCGGCAAGCAGTAGCGGCCATGTTCAGAGGCTGGCAGACACAGGATTCACCTTGGCTTTTATAGGGAACCGCCTGATGTGGCTCAGTTTTGTTGTGTTGTTATGGTCACTTGGTCCTATTGTTGTGGTCCTCTGTTCCTTGGCTCTAGTTTGTGGGTTTTCTACCATGGACTTTTGCAGCCAAATCAGTAAGATTAATAATTCACACTGA ATGGAAGAGTTTTGCTTAGATGCCATATTCATCAGCCTCAGTGTGTTGCTTGTGATGGGATATCACGCCTATCTATGGCTACGCTGGAAGAAGAAACCAGAGAAGACAACCATGGGAGTTCAATGGGAGCATCGGCGAACGTGGCTCGAGAAGACGCTGCTGGGCCATGACAGCATGCAGGTAGTACAGACCTTAAGAAACAATCTCATGATCATAATTCTGAGAGCTTCAATATCAATCGCGGTATCCACTTCTGTAGCAGCCCTCACAAACAACGCATACAAAGCTGCAAATAAATATCAAGGACTGTTACTTGGAACTCAATCTAGCACTGGGATGTTGTTTGTTGTGAAATTTGCTGTTGCATTTGCAGTGTCGATGTCGAGCTTCATCTGTAGCTCGTTTGGGGTTGGGTTTCTGATCGACGCCTGCGTGTTGGTCAGCAGTGCGGCAAGCAGTAGCGGCCATGTTCAGAGGCTGGCAGACACAGGATTCACCTTGGCTTTTATAGGGAACCGCCTGATGTGGCTCAGTTTTGTTGTGTTGTTATGGTCACTTGGTCCTATTGTTGTGGTCCTCTGTTCCTTGGCTCTAGTTTGTGGGTTTTCTACCATGGACTTTTGCAGCCAAATCAGTAAGATTAATAATTCACACTGA MEEFCLDAIFISLSVLLVMGYHAYLWLRWKKKPEKTTMGVQWEHRRTWLEKTLLGHDSMQVVQTLRNNLMIIILRASISIAVSTSVAALTNNAYKAANKYQGLLLGTQSSTGMLFVVKFAVAFAVSMSSFICSSFGVGFLIDACVLVSSAASSSGHVQRLADTGFTLAFIGNRLMWLSFVVLLWSLGPIVVVLCSLALVCGFSTMDFCSQISKINNSH Homology
BLAST of Sed0012986 vs. NCBI nr
Match: XP_022982646.1 (uncharacterized protein LOC111481460 [Cucurbita maxima]) HSP 1 Score: 242.7 bits (618), Expect = 3.0e-60 Identity = 144/216 (66.67%), Postives = 166/216 (76.85%), Query Frame = 0
BLAST of Sed0012986 vs. NCBI nr
Match: KAG7017182.1 (hypothetical protein SDJN02_19044, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 241.9 bits (616), Expect = 5.2e-60 Identity = 144/216 (66.67%), Postives = 165/216 (76.39%), Query Frame = 0
BLAST of Sed0012986 vs. NCBI nr
Match: XP_023528701.1 (uncharacterized protein LOC111791548 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 241.9 bits (616), Expect = 5.2e-60 Identity = 144/216 (66.67%), Postives = 165/216 (76.39%), Query Frame = 0
BLAST of Sed0012986 vs. NCBI nr
Match: XP_016899668.1 (PREDICTED: uncharacterized protein LOC107990610 [Cucumis melo] >TYK24901.1 DUF599 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 231.9 bits (590), Expect = 5.4e-57 Identity = 131/219 (59.82%), Postives = 164/219 (74.89%), Query Frame = 0
BLAST of Sed0012986 vs. NCBI nr
Match: XP_022934642.1 (uncharacterized protein LOC111441778 [Cucurbita moschata] >KAG6580424.1 hypothetical protein SDJN03_20426, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 231.5 bits (589), Expect = 7.0e-57 Identity = 138/202 (68.32%), Postives = 157/202 (77.72%), Query Frame = 0
BLAST of Sed0012986 vs. ExPASy TrEMBL
Match: A0A6J1IZX2 (uncharacterized protein LOC111481460 OS=Cucurbita maxima OX=3661 GN=LOC111481460 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 1.5e-60 Identity = 144/216 (66.67%), Postives = 166/216 (76.85%), Query Frame = 0
BLAST of Sed0012986 vs. ExPASy TrEMBL
Match: A0A5D3DMR3 (DUF599 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00130 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 2.6e-57 Identity = 131/219 (59.82%), Postives = 164/219 (74.89%), Query Frame = 0
BLAST of Sed0012986 vs. ExPASy TrEMBL
Match: A0A1S4DUM5 (uncharacterized protein LOC107990610 OS=Cucumis melo OX=3656 GN=LOC107990610 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 2.6e-57 Identity = 131/219 (59.82%), Postives = 164/219 (74.89%), Query Frame = 0
BLAST of Sed0012986 vs. ExPASy TrEMBL
Match: A0A6J1F3D7 (uncharacterized protein LOC111441778 OS=Cucurbita moschata OX=3662 GN=LOC111441778 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 3.4e-57 Identity = 138/202 (68.32%), Postives = 157/202 (77.72%), Query Frame = 0
BLAST of Sed0012986 vs. ExPASy TrEMBL
Match: A0A5A7TL41 (DUF599 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005950 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 3.7e-56 Identity = 129/219 (58.90%), Postives = 162/219 (73.97%), Query Frame = 0
BLAST of Sed0012986 vs. TAIR 10
Match: AT5G43180.1 (Protein of unknown function, DUF599 ) HSP 1 Score: 112.8 bits (281), Expect = 3.4e-25 Identity = 77/225 (34.22%), Postives = 126/225 (56.00%), Query Frame = 0
BLAST of Sed0012986 vs. TAIR 10
Match: AT4G31330.1 (Protein of unknown function, DUF599 ) HSP 1 Score: 83.6 bits (205), Expect = 2.2e-16 Identity = 58/218 (26.61%), Postives = 104/218 (47.71%), Query Frame = 0
BLAST of Sed0012986 vs. TAIR 10
Match: AT5G24790.1 (Protein of unknown function, DUF599 ) HSP 1 Score: 76.6 bits (187), Expect = 2.7e-14 Identity = 58/221 (26.24%), Postives = 102/221 (46.15%), Query Frame = 0
BLAST of Sed0012986 vs. TAIR 10
Match: AT5G10580.1 (Protein of unknown function, DUF599 ) HSP 1 Score: 74.7 bits (182), Expect = 1.0e-13 Identity = 54/226 (23.89%), Postives = 104/226 (46.02%), Query Frame = 0
BLAST of Sed0012986 vs. TAIR 10
Match: AT5G10580.2 (Protein of unknown function, DUF599 ) HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07 Identity = 36/150 (24.00%), Postives = 72/150 (48.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|