Sed0012856 (gene) Chayote v1

Overview


Name	Sed0012856
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-type E3 ubiquitin transferase
Location	LG13: 3337258 .. 3339009 (-)
RNA-Seq Expression	Sed0012856
Synteny	Sed0012856

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTGAATCCCCCCTTTCCCTCTCTCACCTGTCCGCCAATGTCTCTCTGTTTCATCCCAACTCTGAATCTGCGCAGAGCTCTCAGATTTGTTACCATTCATCTTTTGTAGTCTTTCTGTTCTTCCGATTCAACCAACCATGCCTGCAACTGTGGCCGTCCAGCCCTTGGATTTGAGCCTGCAGATTCCCTACCATTTCCGCTGCCCCATCTCCCTCGAGCTCATGCACGACCCGGTCACCGTCGCCACCGGCCAGACCTACGACCGCTCCAGCATCGAGGCCTGGGTCGCCACCGGCAACACCACCTGCCCGGTCACCCGAGCCTTCATCTCCGACTTCACTCTCATCCCTAACCATACCCTCCGGCGGCTCATTCAGGACTGGTGCGTCGCCAATCGGAGATTCGGCGTTGAGCGGATCCCGACGCCCAAGCAGCCGGCGGATCCGTCGCTCGTGAGATCCATTCTGGCTCAGGTTTCGTCCAGATCCAACGGTTTCGGTTCTCGAATCTCCGCTCTCCGGCGGTTGAAAGGACTCGCTCGCGACTCCGATGTCAATCGCTCTGTCATTTCCTCTCTCAATGCTTCTGAAATTCTGATCGATCTTCTGTTTCTGGATTTGGATATGGAGTCCGTTTCGATTTCTGTTACGGATTCTGATCATTTGCGCCGCGAATCGCTCGCGATGATCGTGATGTTGCCGCTCACGGAATCTGAGTGCGTTCTCGTCGCGTCAGATCCGCAACGGATCCGTTACGTTTCGAATCTCCTGTTCGATTCGTCGGTCGAGGTTCGGATCAACGCCGCGGCCTTGATCGAGGTCGTCATCGCCGGGACGCGAGATTCGGAGCTCCGAGGTCGAATCTGCGGGACCGACGAGATCTTCGAAGGCGTGGTGGAGATTCTCCGGCGTTCGCCGGCGTATCCTCGCGCGCTGAAGGTCGGAATCAAGGCCTTGTTCGCTCTCTGTTTGGTGAAATCGACTCGCCTCAAGGCGGTCTCCGCCGGCGCCGTCGAGATTCTCGTCGATCGGTTCCACGATTTGGAGAAGTACGACGCCGAGCGAGCTCTGGCGACGATGGAGCTCATCTGCAGGATTCCGGGCGGTTGCGCGGCGTTTGGCGCTCACGCGGTGACGGTTCCGTTGCTTGTGAAGGTGATTCTGAAGATTTCGGACAGGGCGACGGAGTCGGCGGTGGGGGCTCTGGTGTCGCTGTGCTCGGGGGCGGAGGAGAGGCGGCGGGAGGCGGTGGCGGCGGGGATTTTCACGCAGTTGCTGCTGCTGGTGCAGAGCGATTGTACGGAGCGGGTGAAGCGGAAATCGCAGGTGCTGTTGAAGCTTTTGAGAGATTCATGGCCGCAAGATTCCGTTGGAAATTCCGATGACTATAATTGCAGCGAAATCGTGGTACAGTTTTGTTAATCCATTTTCCGAATTTCTGGTTTGGTCTGTAACTTTGAAGATTCATTCATCAAGAAACGAACAACAACAACAAATTGTGAACGAAACGAACAGAGGGAGTTGCACTACTTTTCTGTATCTAATTTTTGTATGTAATTTTTTTTTCAATAGGTTTCAGAAAAAAATTATCCAAAAAAAAAAAAAAGAGAAAAAGAAATGGTTTGAGTCTATTTTTTTAGTCTTTTTTAAATTTTATTTTATAAATGGTGTATTATTAAGTTTTTTTTATTTTTTTTGGCATGAGATTTGTTTAAATTTGTGACATGATTTTCCATATTAATGATATTTTAA

mRNA sequence

TGTTGAATCCCCCCTTTCCCTCTCTCACCTGTCCGCCAATGTCTCTCTGTTTCATCCCAACTCTGAATCTGCGCAGAGCTCTCAGATTTGTTACCATTCATCTTTTGTAGTCTTTCTGTTCTTCCGATTCAACCAACCATGCCTGCAACTGTGGCCGTCCAGCCCTTGGATTTGAGCCTGCAGATTCCCTACCATTTCCGCTGCCCCATCTCCCTCGAGCTCATGCACGACCCGGTCACCGTCGCCACCGGCCAGACCTACGACCGCTCCAGCATCGAGGCCTGGGTCGCCACCGGCAACACCACCTGCCCGGTCACCCGAGCCTTCATCTCCGACTTCACTCTCATCCCTAACCATACCCTCCGGCGGCTCATTCAGGACTGGTGCGTCGCCAATCGGAGATTCGGCGTTGAGCGGATCCCGACGCCCAAGCAGCCGGCGGATCCGTCGCTCGTGAGATCCATTCTGGCTCAGGTTTCGTCCAGATCCAACGGTTTCGGTTCTCGAATCTCCGCTCTCCGGCGGTTGAAAGGACTCGCTCGCGACTCCGATGTCAATCGCTCTGTCATTTCCTCTCTCAATGCTTCTGAAATTCTGATCGATCTTCTGTTTCTGGATTTGGATATGGAGTCCGTTTCGATTTCTGTTACGGATTCTGATCATTTGCGCCGCGAATCGCTCGCGATGATCGTGATGTTGCCGCTCACGGAATCTGAGTGCGTTCTCGTCGCGTCAGATCCGCAACGGATCCGTTACGTTTCGAATCTCCTGTTCGATTCGTCGGTCGAGGTTCGGATCAACGCCGCGGCCTTGATCGAGGTCGTCATCGCCGGGACGCGAGATTCGGAGCTCCGAGGTCGAATCTGCGGGACCGACGAGATCTTCGAAGGCGTGGTGGAGATTCTCCGGCGTTCGCCGGCGTATCCTCGCGCGCTGAAGGTCGGAATCAAGGCCTTGTTCGCTCTCTGTTTGGTGAAATCGACTCGCCTCAAGGCGGTCTCCGCCGGCGCCGTCGAGATTCTCGTCGATCGGTTCCACGATTTGGAGAAGTACGACGCCGAGCGAGCTCTGGCGACGATGGAGCTCATCTGCAGGATTCCGGGCGGTTGCGCGGCGTTTGGCGCTCACGCGGTGACGGTTCCGTTGCTTGTGAAGGTGATTCTGAAGATTTCGGACAGGGCGACGGAGTCGGCGGTGGGGGCTCTGGTGTCGCTGTGCTCGGGGGCGGAGGAGAGGCGGCGGGAGGCGGTGGCGGCGGGGATTTTCACGCAGTTGCTGCTGCTGGTGCAGAGCGATTGTACGGAGCGGGTGAAGCGGAAATCGCAGGTGCTGTTGAAGCTTTTGAGAGATTCATGGCCGCAAGATTCCGTTGGAAATTCCGATGACTATAATTGCAGCGAAATCGTGGTACAGTTTTGTTAATCCATTTTCCGAATTTCTGGTTTGGTCTGTAACTTTGAAGATTCATTCATCAAGAAACGAACAACAACAACAAATTGTGAACGAAACGAACAGAGGGAGTTGCACTACTTTTCTGTATCTAATTTTTGTATGTAATTTTTTTTTCAATAGGTTTCAGAAAAAAATTATCCAAAAAAAAAAAAAAGAGAAAAAGAAATGGTTTGAGTCTATTTTTTTAGTCTTTTTTAAATTTTATTTTATAAATGGTGTATTATTAAGTTTTTTTTATTTTTTTTGGCATGAGATTTGTTTAAATTTGTGACATGATTTTCCATATTAATGATATTTTAA

Coding sequence (CDS)

ATGCCTGCAACTGTGGCCGTCCAGCCCTTGGATTTGAGCCTGCAGATTCCCTACCATTTCCGCTGCCCCATCTCCCTCGAGCTCATGCACGACCCGGTCACCGTCGCCACCGGCCAGACCTACGACCGCTCCAGCATCGAGGCCTGGGTCGCCACCGGCAACACCACCTGCCCGGTCACCCGAGCCTTCATCTCCGACTTCACTCTCATCCCTAACCATACCCTCCGGCGGCTCATTCAGGACTGGTGCGTCGCCAATCGGAGATTCGGCGTTGAGCGGATCCCGACGCCCAAGCAGCCGGCGGATCCGTCGCTCGTGAGATCCATTCTGGCTCAGGTTTCGTCCAGATCCAACGGTTTCGGTTCTCGAATCTCCGCTCTCCGGCGGTTGAAAGGACTCGCTCGCGACTCCGATGTCAATCGCTCTGTCATTTCCTCTCTCAATGCTTCTGAAATTCTGATCGATCTTCTGTTTCTGGATTTGGATATGGAGTCCGTTTCGATTTCTGTTACGGATTCTGATCATTTGCGCCGCGAATCGCTCGCGATGATCGTGATGTTGCCGCTCACGGAATCTGAGTGCGTTCTCGTCGCGTCAGATCCGCAACGGATCCGTTACGTTTCGAATCTCCTGTTCGATTCGTCGGTCGAGGTTCGGATCAACGCCGCGGCCTTGATCGAGGTCGTCATCGCCGGGACGCGAGATTCGGAGCTCCGAGGTCGAATCTGCGGGACCGACGAGATCTTCGAAGGCGTGGTGGAGATTCTCCGGCGTTCGCCGGCGTATCCTCGCGCGCTGAAGGTCGGAATCAAGGCCTTGTTCGCTCTCTGTTTGGTGAAATCGACTCGCCTCAAGGCGGTCTCCGCCGGCGCCGTCGAGATTCTCGTCGATCGGTTCCACGATTTGGAGAAGTACGACGCCGAGCGAGCTCTGGCGACGATGGAGCTCATCTGCAGGATTCCGGGCGGTTGCGCGGCGTTTGGCGCTCACGCGGTGACGGTTCCGTTGCTTGTGAAGGTGATTCTGAAGATTTCGGACAGGGCGACGGAGTCGGCGGTGGGGGCTCTGGTGTCGCTGTGCTCGGGGGCGGAGGAGAGGCGGCGGGAGGCGGTGGCGGCGGGGATTTTCACGCAGTTGCTGCTGCTGGTGCAGAGCGATTGTACGGAGCGGGTGAAGCGGAAATCGCAGGTGCTGTTGAAGCTTTTGAGAGATTCATGGCCGCAAGATTCCGTTGGAAATTCCGATGACTATAATTGCAGCGAAATCGTGGTACAGTTTTGTTAA

Protein sequence

MPATVAVQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCPVTRAFISDFTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSNGFGSRISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRRESLAMIVMLPLTESECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSELRGRICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDRFHDLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVSLCSGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYNCSEIVVQFC

Homology

[Close]

BLAST of Sed0012856 vs. NCBI nr
Match: XP_038875257.1 (U-box domain-containing protein 26-like isoform X2 [Benincasa hispida] >XP_038875267.1 U-box domain-containing protein 26-like isoform X3 [Benincasa hispida])

HSP 1 Score: 676.8 bits (1745), Expect = 1.2e-190
Identity = 354/429 (82.52%), Postives = 385/429 (89.74%), Query Frame = 0


Query: 1   MPAT--VAVQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCP 60
           MP T  VAV+PLDLS+ IPYHFRCPISLELM DPVTV+TGQTYDRSSIE+WVATGNTTCP
Sbjct: 1   MPGTGSVAVEPLDLSVHIPYHFRCPISLELMRDPVTVSTGQTYDRSSIESWVATGNTTCP 60

Query: 61  VTRAFISDFTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSN 120
           VTRA ++DFTLIPNHTLRRLIQDWCVANR +GVERIPTPKQPA+PSLVRS+L+Q SSRS+
Sbjct: 61  VTRAPLTDFTLIPNHTLRRLIQDWCVANRSYGVERIPTPKQPAEPSLVRSLLSQASSRSS 120

Query: 121 GFGSRISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRR 180
           G   RISALRRLKGLARDSD NRS+ISSLNA EIL+D++F +LD +S S     S  L R
Sbjct: 121 GLNLRISALRRLKGLARDSDKNRSLISSLNAREILLDVVFSNLDSDSDSF----SPDLSR 180

Query: 181 ESLAMIVMLPLTESECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSEL 240
           ESLA++VMLPLTESECVLVASDPQRI Y+S+LLFDSS+EVRINAAALIE VIAGTR SEL
Sbjct: 181 ESLALLVMLPLTESECVLVASDPQRIGYLSHLLFDSSIEVRINAAALIETVIAGTRASEL 240

Query: 241 RGRICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDR 300
           R +ICG DE+FEGVVEILR   AYPRALKVG+KALFALCLVK TR KAVSAGA EI++DR
Sbjct: 241 RSQICGIDELFEGVVEILRDPTAYPRALKVGVKALFALCLVKQTRHKAVSAGAAEIIIDR 300

Query: 301 FHDLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVS 360
           F DLEKYDAERALAT+ELICRIP GC AF AHA+TVPLLVKVILKISDRATESAVGALVS
Sbjct: 301 FPDLEKYDAERALATIELICRIPTGCDAFAAHALTVPLLVKVILKISDRATESAVGALVS 360

Query: 361 LCSGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYN 420
           LCS +EE RREAVAAGI TQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQ+SVGNSDDY 
Sbjct: 361 LCSASEENRREAVAAGILTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQESVGNSDDYG 420

Query: 421 CSEIVVQFC 428
           CSEIVV FC
Sbjct: 421 CSEIVVPFC 425

[Close]

BLAST of Sed0012856 vs. NCBI nr
Match: XP_008456137.1 (PREDICTED: U-box domain-containing protein 26-like [Cucumis melo] >KAA0037126.1 U-box domain-containing protein 26-like [Cucumis melo var. makuwa] >TYK13948.1 U-box domain-containing protein 26-like [Cucumis melo var. makuwa])

HSP 1 Score: 675.2 bits (1741), Expect = 3.6e-190
Identity = 355/429 (82.75%), Postives = 383/429 (89.28%), Query Frame = 0


Query: 1   MPAT--VAVQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCP 60
           MP T  VAVQPLDLSL IPYHFRCPISLELM DPVTV+TGQTYDRSSIE+WVATGNTTCP
Sbjct: 1   MPGTGSVAVQPLDLSLHIPYHFRCPISLELMRDPVTVSTGQTYDRSSIESWVATGNTTCP 60

Query: 61  VTRAFISDFTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSN 120
           VTRA ++DFTLIPNHTLRRLIQDWCVANR +GVERIPTPKQPA+PSLVRS+L Q SSRS+
Sbjct: 61  VTRAPLTDFTLIPNHTLRRLIQDWCVANRSYGVERIPTPKQPAEPSLVRSLLGQASSRSS 120

Query: 121 GFGSRISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRR 180
           G   RISALRRLKGLARDSD NRS+ISSLNA EIL+D++F +LD  S S     S  L R
Sbjct: 121 GSSLRISALRRLKGLARDSDKNRSLISSLNAREILLDVVFSNLDSGSDSF----SPDLSR 180

Query: 181 ESLAMIVMLPLTESECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSEL 240
           ESLA++VMLPLTESECVLVASDPQRI Y+S+LLFDSS+EVRINAAALIE VIAGTR SEL
Sbjct: 181 ESLALLVMLPLTESECVLVASDPQRIGYLSHLLFDSSIEVRINAAALIETVIAGTRASEL 240

Query: 241 RGRICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDR 300
           R +ICG DE+FEGVVEILR   AYPRALKVG+KALFALCLVK TR KAVSAGA EI++DR
Sbjct: 241 RTQICGIDELFEGVVEILRDPTAYPRALKVGVKALFALCLVKQTRHKAVSAGAAEIIIDR 300

Query: 301 FHDLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVS 360
           F DLEKYDAERALAT+ELICR+P GC AF AHA+TVPLLVKVILKISDRATESAVGALVS
Sbjct: 301 FPDLEKYDAERALATIELICRVPTGCDAFAAHALTVPLLVKVILKISDRATESAVGALVS 360

Query: 361 LCSGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYN 420
           LCS +EE RREAVAAGI TQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQ+SVGNSDDY 
Sbjct: 361 LCSASEENRREAVAAGILTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQESVGNSDDYG 420

Query: 421 CSEIVVQFC 428
           CSEIVV FC
Sbjct: 421 CSEIVVPFC 425

[Close]

BLAST of Sed0012856 vs. NCBI nr
Match: XP_004140703.1 (U-box domain-containing protein 26 [Cucumis sativus] >KGN57520.1 hypothetical protein Csa_011013 [Cucumis sativus])

HSP 1 Score: 672.2 bits (1733), Expect = 3.0e-189
Identity = 355/429 (82.75%), Postives = 383/429 (89.28%), Query Frame = 0


Query: 1   MPAT--VAVQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCP 60
           MP T  VAVQPLDLSL IPYHFRCPISLELM DPVTV+TGQTYDRSSIE+WVATGNTTCP
Sbjct: 1   MPGTGSVAVQPLDLSLHIPYHFRCPISLELMRDPVTVSTGQTYDRSSIESWVATGNTTCP 60

Query: 61  VTRAFISDFTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSN 120
           VTRA ++DFTLIPNHTLRRLIQ+WCVANR +GVERIPTPKQPA+PSLVRS+LAQ SSRS+
Sbjct: 61  VTRAPLTDFTLIPNHTLRRLIQEWCVANRSYGVERIPTPKQPAEPSLVRSLLAQASSRSS 120

Query: 121 GFGSRISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRR 180
           G   RISALRRLKGLARDSD NRS+ISSLNA EIL+D++F +LD  S S     S  L R
Sbjct: 121 GSSLRISALRRLKGLARDSDKNRSLISSLNAREILLDVVFSNLDSGSDSF----SPDLSR 180

Query: 181 ESLAMIVMLPLTESECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSEL 240
           ESLA++VMLPLTESECVLVASDPQRI Y+S+LLFDSS+E RINAAALIE VIAGTR SEL
Sbjct: 181 ESLALLVMLPLTESECVLVASDPQRIGYLSHLLFDSSIEDRINAAALIETVIAGTRASEL 240

Query: 241 RGRICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDR 300
           R +ICG DE+FEGVVEILR   AYPRALKVG+KALFALCLVK TR KAVSAGA EI++DR
Sbjct: 241 RTQICGIDELFEGVVEILRDPTAYPRALKVGVKALFALCLVKQTRHKAVSAGAAEIIIDR 300

Query: 301 FHDLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVS 360
           F DLEKYDAERALAT+ELICRIP GC AF AHA+TVPLLVKVILKISDRATESAVGALVS
Sbjct: 301 FPDLEKYDAERALATIELICRIPTGCDAFAAHALTVPLLVKVILKISDRATESAVGALVS 360

Query: 361 LCSGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYN 420
           LCS +EE RREAVAAGI TQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQ+SVGNSDDY 
Sbjct: 361 LCSASEENRREAVAAGILTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQESVGNSDDYA 420

Query: 421 CSEIVVQFC 428
           CSEIVV FC
Sbjct: 421 CSEIVVPFC 425

[Close]

BLAST of Sed0012856 vs. NCBI nr
Match: XP_022981075.1 (U-box domain-containing protein 26-like [Cucurbita maxima])

HSP 1 Score: 671.0 bits (1730), Expect = 6.8e-189
Identity = 348/426 (81.69%), Postives = 384/426 (90.14%), Query Frame = 0


Query: 1   MPATVAVQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCPVT 60
           MP +V V+PLDLS+QIPYHFRCPISLELM DPVTV+TGQTYDRSSIE+WVATGNTTCPVT
Sbjct: 1   MPGSVVVEPLDLSVQIPYHFRCPISLELMRDPVTVSTGQTYDRSSIESWVATGNTTCPVT 60

Query: 61  RAFISDFTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSNGF 120
           RA +++FTLIPNHTLRRLIQ+WCVANR +GVERIPTPKQPADPSLVRS+L Q SS+S+G 
Sbjct: 61  RAPLTEFTLIPNHTLRRLIQEWCVANRSYGVERIPTPKQPADPSLVRSLLGQASSKSSGS 120

Query: 121 GSRISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRRES 180
            SRISA+RRLKGLARDS+ NRS+ISSLNA EILID++F + D +SV      S  L RES
Sbjct: 121 SSRISAVRRLKGLARDSEKNRSLISSLNAREILIDVVFSNSDSDSV------SPDLSRES 180

Query: 181 LAMIVMLPLTESECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSELRG 240
           LA++VMLPLTESECVLVASDPQRI Y+S+LLFDSS+EVRINAAALIE+VIAGTR SELRG
Sbjct: 181 LALLVMLPLTESECVLVASDPQRIGYLSHLLFDSSIEVRINAAALIEIVIAGTRASELRG 240

Query: 241 RICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDRFH 300
           +IC  DE+FEGVVEILR   AYPRA+KVG+KALFALCLVK TR KAVSAGA EIL+DRF 
Sbjct: 241 QICAIDELFEGVVEILRDPTAYPRAVKVGVKALFALCLVKQTRHKAVSAGAAEILIDRFP 300

Query: 301 DLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVSLC 360
           DLEKYDAERALAT+ELICRIP G  AF AHA+TVPLLVKVILKISDRATESAVGALVSLC
Sbjct: 301 DLEKYDAERALATIELICRIPTGYDAFAAHALTVPLLVKVILKISDRATESAVGALVSLC 360

Query: 361 SGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYNCS 420
           S +EE RREAVAAGIFTQLLLLVQSDCT+RVKRKSQVLLKLLRDSWPQDSVGNSDDY CS
Sbjct: 361 SASEENRREAVAAGIFTQLLLLVQSDCTDRVKRKSQVLLKLLRDSWPQDSVGNSDDYGCS 420

Query: 421 EIVVQF 427
           EIV+ F
Sbjct: 421 EIVIPF 420

[Close]

BLAST of Sed0012856 vs. NCBI nr
Match: XP_022942824.1 (U-box domain-containing protein 26-like [Cucurbita moschata] >KAG6600321.1 U-box domain-containing protein 26, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030978.1 U-box domain-containing protein 26, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 671.0 bits (1730), Expect = 6.8e-189
Identity = 348/426 (81.69%), Postives = 384/426 (90.14%), Query Frame = 0


Query: 1   MPATVAVQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCPVT 60
           MP +V V+PLDLS+QIPYHFRCPISLELM DPVTV+TGQTYDRSSIE+WVATGNTTCPVT
Sbjct: 1   MPGSVVVEPLDLSVQIPYHFRCPISLELMRDPVTVSTGQTYDRSSIESWVATGNTTCPVT 60

Query: 61  RAFISDFTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSNGF 120
           RA +++FTLIPNHTLRRLIQ+WCVANR +GVERIPTPKQPADPSLVRS+L Q SS+S+G 
Sbjct: 61  RAPLTEFTLIPNHTLRRLIQEWCVANRSYGVERIPTPKQPADPSLVRSLLGQASSKSSGS 120

Query: 121 GSRISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRRES 180
            SRISA+RRLKGLARDS+ NRS+ISSLNA EILID++F + D +SV      S  L RES
Sbjct: 121 SSRISAVRRLKGLARDSEKNRSLISSLNAREILIDVVFSNSDSDSV------SPDLSRES 180

Query: 181 LAMIVMLPLTESECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSELRG 240
           LA++VMLPLTESECVLVASDPQRI Y+S+LLFDSS+EVRINAAALIE+VIAGTR SELRG
Sbjct: 181 LALLVMLPLTESECVLVASDPQRIGYLSHLLFDSSIEVRINAAALIEIVIAGTRASELRG 240

Query: 241 RICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDRFH 300
           +IC  DE+FEGVVEILR   AYPRA+KVG+KALFALCLVK TR KAVSAGA EIL+DRF 
Sbjct: 241 QICAIDELFEGVVEILRDPTAYPRAVKVGVKALFALCLVKQTRHKAVSAGAAEILIDRFP 300

Query: 301 DLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVSLC 360
           DLEKYDAERALAT+ELICRIP G  AF +HA+TVPLLVKVILKISDRATESAVGALVSLC
Sbjct: 301 DLEKYDAERALATIELICRIPTGYDAFASHALTVPLLVKVILKISDRATESAVGALVSLC 360

Query: 361 SGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYNCS 420
           S +EE RREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDY CS
Sbjct: 361 SASEENRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYGCS 420

Query: 421 EIVVQF 427
           EIV+ F
Sbjct: 421 EIVIPF 420

[Close]

BLAST of Sed0012856 vs. ExPASy Swiss-Prot
Match: Q9FXA4 (U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.8e-144
Identity = 262/420 (62.38%), Postives = 334/420 (79.52%), Query Frame = 0


Query: 7   VQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCPVTRAFISD 66
           ++PLDL +QIPYHFRCPISL+LM DPVT++TGQTYDR+SI++W+A GNTTCPVTR  +SD
Sbjct: 5   LEPLDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSD 64

Query: 67  FTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSN---GFGSR 126
           FTLIPNHTLRRLIQ+WCVANR  GVERIPTPKQPADP  VRS+L+Q S+ +       SR
Sbjct: 65  FTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSR 124

Query: 127 ISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRRESLAM 186
            +A+RRL+GLARDS+ NR +I+  NA EIL+ +LF D++  S+      S  L  ESLA+
Sbjct: 125 AAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSL------SSELVSESLAL 184

Query: 187 IVMLPLTESECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSELRGRIC 246
           +V+L +TE+EC  VASDP R+ +++ LLFDSS+E+R+NAAALIE+V+ G +  +L+  I 
Sbjct: 185 LVLLHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIIS 244

Query: 247 GTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDRF-HDL 306
           G+D IFEGV+++L+   +  RALK+GIKA+FALCLVK TR  A+SAGA  IL+DR   D 
Sbjct: 245 GSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADF 304

Query: 307 EKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVSLCSG 366
           ++ D ER LAT+EL+CR+P GCAAFG HA+TVPL+VK IL++SDRATE A GAL++LC+ 
Sbjct: 305 DRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTA 364

Query: 367 AEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYNCSEI 423
            E  R EA AAG+ TQLLLLVQSDCTER KRK+Q+LLKLLRDSWP DS  +SDD+N SE+
Sbjct: 365 EERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHSDDFNRSEV 418

[Close]

BLAST of Sed0012856 vs. ExPASy Swiss-Prot
Match: Q9LT79 (U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 2.4e-141
Identity = 265/427 (62.06%), Postives = 332/427 (77.75%), Query Frame = 0


Query: 7   VQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATG-NTTCPVTRAFIS 66
           ++PLDL +QIPYHFRCPISLELM DPVTV TGQTYDR+SIE+WV+ G NTTCPVTRA +S
Sbjct: 5   IEPLDLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLS 64

Query: 67  DFTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSN---GFGS 126
           DFTLIPNHTLRRLIQ+WCVANR  GVERIPTPKQPADP+ VR++L+Q S+ +       S
Sbjct: 65  DFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRS 124

Query: 127 RISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRRESLA 186
           R +ALRRL+G ARDSD NR +I++ NA+EILI +LF          S T S  L  ESLA
Sbjct: 125 RAAALRRLRGFARDSDKNRVLIAAHNATEILIKILF----------SETTSSELVSESLA 184

Query: 187 MIVMLPLTE-SECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSELRGR 246
           ++VMLP+TE ++ V ++SDP R+ +++ LLFDSS+E R+NAAALIE+V  GT+ ++L+G 
Sbjct: 185 LLVMLPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGS 244

Query: 247 ICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDRF-H 306
           I  ++ +FEGV+++LR   +  RALK+GIK LFALC VKSTR  A++AGA EIL+DR   
Sbjct: 245 ISNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAA 304

Query: 307 DLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVSLC 366
           D ++ D ERALAT+EL+CR P GCAAFG HA+TVPLLVK IL++SDRATE A GAL++LC
Sbjct: 305 DFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALC 364

Query: 367 SGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQ-DSVGNSDDYNC 426
           +  E  R EA  AG+  QLLL+VQS+CTER K+K+Q LLKLLRDSWP  +S  NSDD+ C
Sbjct: 365 TAEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDYNSFANSDDFGC 421

[Close]

BLAST of Sed0012856 vs. ExPASy Swiss-Prot
Match: Q84TG3 (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.1e-44
Identity = 129/409 (31.54%), Postives = 208/409 (50.86%), Query Frame = 0


Query: 10  LDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATG-NTTCPVTRAFISDFT 69
           +D  ++IP  F CPISLE+M DPV V+TG TYDR SIE W+  G   +CPVT+  I+D  
Sbjct: 6   MDEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDAD 65

Query: 70  LIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSNGFGSRISALR 129
           L PNHTLRRLIQ WC  N  +GVERIPTP+ P   S +  ++   +S      +++  L+
Sbjct: 66  LTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHE---NQVKCLK 125

Query: 130 RLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRRESLAMIVMLP 189
           RL+ +  ++  N+  + +    E L +++  D    S + S+TD         A+ ++  
Sbjct: 126 RLRQIVSENATNKRCLEAAGVPEFLANIVSND----SENGSLTDE--------ALNLLYH 185

Query: 190 LTESECVLV-----ASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSELRGRIC 249
           L  SE VL        D   ++ ++ ++     E R+ A  L++ ++     ++    + 
Sbjct: 186 LETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNIL---EVADPMQSMT 245

Query: 250 GTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGA----VEILVDRF 309
              E+F  VV+IL       +A K  +  L  +C     R KAV AG     +E+L+D  
Sbjct: 246 LKPEVFTEVVQIL-DDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDES 305

Query: 310 HDLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVSL 369
              E+   E A+  ++L+C+   G A F  H   + ++ K IL++S  A++ AV  L+S+
Sbjct: 306 FTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSV 365

Query: 370 --CSGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSW 407
                      E +  G+  +L L++Q  C  + K K++ LLKL    W
Sbjct: 366 GRFCATPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVW 395

[Close]

BLAST of Sed0012856 vs. ExPASy Swiss-Prot
Match: Q9SVC6 (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.1e-43
Identity = 124/426 (29.11%), Postives = 220/426 (51.64%), Query Frame = 0


Query: 10  LDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATG-NTTCPVTRAFISDFT 69
           +D  ++IP  F CPISL++M DPV V+TG TYDR SIE W+ +G   +CPVT+  I++  
Sbjct: 1   MDQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETD 60

Query: 70  LIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSNGFGSRISALR 129
           L PNHTLRRLIQ WC  N  +G+ERIPTPK P   S +  ++ + SS      +++  L+
Sbjct: 61  LTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSS---SHLNQVKCLK 120

Query: 130 RLKGLARDSDVNRSVISSLNASEILIDLLFLDLD-MESVSISVTDSD------------- 189
           RL+ +  ++  N+  + +    E L +++   +D   S S S++ S+             
Sbjct: 121 RLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENR 180

Query: 190 -----HLRRESLAMIVMLPLTESECVLVASDPQ---RIRYVSNLLFDSSVEVRINAAALI 249
                 L  E+L+++  L  +E+    + ++ +    ++ ++ ++     E R  AA L+
Sbjct: 181 FDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLL 240

Query: 250 EVVIAGTRDSELRGRICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKA 309
           + ++      ++   I    E+F  V++IL    ++ +A +  ++ L   C     R KA
Sbjct: 241 KKLLEVADPMQI---ILLERELFGEVIQILHDQISH-KATRSAMQILVITCPWGRNRHKA 300

Query: 310 VSAGA----VEILVDRFHDLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVIL 369
           V  G     +E+L+D     E+ ++E A+  ++++C+   G A F  H   + ++ K IL
Sbjct: 301 VEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKIL 360

Query: 370 KISDRATESAVGALVSL--CSGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLK 407
           ++S   +E AV  L+S+          +E +  G+  +L L++Q  C  + K K++ LLK
Sbjct: 361 RVSQITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLK 419

[Close]

BLAST of Sed0012856 vs. ExPASy Swiss-Prot
Match: Q5PNY6 (U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.4e-42
Identity = 124/393 (31.55%), Postives = 204/393 (51.91%), Query Frame = 0


Query: 14  LQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCPVTRAFISDFTLIPNH 73
           + IP  F+CPIS++LM DPV ++TG TYDR SIE W+ +GN TCPVT   ++ F  IPNH
Sbjct: 29  ITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNH 88

Query: 74  TLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSS--RSNGFGSRISALRRLK 133
           T+R++IQ WCV      ++RIPTP+ P  P  V  I  ++SS  R   +      + ++K
Sbjct: 89  TIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIEKIK 148

Query: 134 GLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRRESLAMIVMLPLTE 193
            L  +S+ NR  ++  +   +L D      D  S    +T    +  E L+++  +    
Sbjct: 149 KLGDESEKNRKCVNENSVGWVLCDC----FDKFSGDEKLT---FMLNEILSLLTWMFPIG 208

Query: 194 SECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSELRGRICGTDEIFEG 253
            E +   +     R V+ LL  +   VR NAA +++ ++  + D          + + E 
Sbjct: 209 LEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEIL--SLDETRVHSFAVENGVAEA 268

Query: 254 VVEILRRSPAYPRALKVGIKALFALCLVK-STRLKAVSAGAVEILVDRFHDLEKYDAERA 313
           +V+++R S +   + K  + A++ + L K     + +  G V I V+   D E    E+A
Sbjct: 269 LVKLIRDSVS-SSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEKA 328

Query: 314 LATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVSLC-SGAEERRRE 373
           LA ++ IC    G      +A+ +PLLVK I K+S+ AT S++  ++ L  +G      +
Sbjct: 329 LAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNTVAVED 388

Query: 374 AVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLL 403
           AV  G F ++LL++Q    E  K K+  LLK++
Sbjct: 389 AVRLGAFQKVLLVLQVGYGEETKEKATELLKMM 411

[Close]

BLAST of Sed0012856 vs. ExPASy TrEMBL
Match: A0A5A7T4S1 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001500 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.7e-190
Identity = 355/429 (82.75%), Postives = 383/429 (89.28%), Query Frame = 0


Query: 1   MPAT--VAVQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCP 60
           MP T  VAVQPLDLSL IPYHFRCPISLELM DPVTV+TGQTYDRSSIE+WVATGNTTCP
Sbjct: 1   MPGTGSVAVQPLDLSLHIPYHFRCPISLELMRDPVTVSTGQTYDRSSIESWVATGNTTCP 60

Query: 61  VTRAFISDFTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSN 120
           VTRA ++DFTLIPNHTLRRLIQDWCVANR +GVERIPTPKQPA+PSLVRS+L Q SSRS+
Sbjct: 61  VTRAPLTDFTLIPNHTLRRLIQDWCVANRSYGVERIPTPKQPAEPSLVRSLLGQASSRSS 120

Query: 121 GFGSRISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRR 180
           G   RISALRRLKGLARDSD NRS+ISSLNA EIL+D++F +LD  S S     S  L R
Sbjct: 121 GSSLRISALRRLKGLARDSDKNRSLISSLNAREILLDVVFSNLDSGSDSF----SPDLSR 180

Query: 181 ESLAMIVMLPLTESECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSEL 240
           ESLA++VMLPLTESECVLVASDPQRI Y+S+LLFDSS+EVRINAAALIE VIAGTR SEL
Sbjct: 181 ESLALLVMLPLTESECVLVASDPQRIGYLSHLLFDSSIEVRINAAALIETVIAGTRASEL 240

Query: 241 RGRICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDR 300
           R +ICG DE+FEGVVEILR   AYPRALKVG+KALFALCLVK TR KAVSAGA EI++DR
Sbjct: 241 RTQICGIDELFEGVVEILRDPTAYPRALKVGVKALFALCLVKQTRHKAVSAGAAEIIIDR 300

Query: 301 FHDLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVS 360
           F DLEKYDAERALAT+ELICR+P GC AF AHA+TVPLLVKVILKISDRATESAVGALVS
Sbjct: 301 FPDLEKYDAERALATIELICRVPTGCDAFAAHALTVPLLVKVILKISDRATESAVGALVS 360

Query: 361 LCSGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYN 420
           LCS +EE RREAVAAGI TQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQ+SVGNSDDY 
Sbjct: 361 LCSASEENRREAVAAGILTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQESVGNSDDYG 420

Query: 421 CSEIVVQFC 428
           CSEIVV FC
Sbjct: 421 CSEIVVPFC 425

[Close]

BLAST of Sed0012856 vs. ExPASy TrEMBL
Match: A0A1S3C380 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103496167 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.7e-190
Identity = 355/429 (82.75%), Postives = 383/429 (89.28%), Query Frame = 0


Query: 1   MPAT--VAVQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCP 60
           MP T  VAVQPLDLSL IPYHFRCPISLELM DPVTV+TGQTYDRSSIE+WVATGNTTCP
Sbjct: 1   MPGTGSVAVQPLDLSLHIPYHFRCPISLELMRDPVTVSTGQTYDRSSIESWVATGNTTCP 60

Query: 61  VTRAFISDFTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSN 120
           VTRA ++DFTLIPNHTLRRLIQDWCVANR +GVERIPTPKQPA+PSLVRS+L Q SSRS+
Sbjct: 61  VTRAPLTDFTLIPNHTLRRLIQDWCVANRSYGVERIPTPKQPAEPSLVRSLLGQASSRSS 120

Query: 121 GFGSRISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRR 180
           G   RISALRRLKGLARDSD NRS+ISSLNA EIL+D++F +LD  S S     S  L R
Sbjct: 121 GSSLRISALRRLKGLARDSDKNRSLISSLNAREILLDVVFSNLDSGSDSF----SPDLSR 180

Query: 181 ESLAMIVMLPLTESECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSEL 240
           ESLA++VMLPLTESECVLVASDPQRI Y+S+LLFDSS+EVRINAAALIE VIAGTR SEL
Sbjct: 181 ESLALLVMLPLTESECVLVASDPQRIGYLSHLLFDSSIEVRINAAALIETVIAGTRASEL 240

Query: 241 RGRICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDR 300
           R +ICG DE+FEGVVEILR   AYPRALKVG+KALFALCLVK TR KAVSAGA EI++DR
Sbjct: 241 RTQICGIDELFEGVVEILRDPTAYPRALKVGVKALFALCLVKQTRHKAVSAGAAEIIIDR 300

Query: 301 FHDLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVS 360
           F DLEKYDAERALAT+ELICR+P GC AF AHA+TVPLLVKVILKISDRATESAVGALVS
Sbjct: 301 FPDLEKYDAERALATIELICRVPTGCDAFAAHALTVPLLVKVILKISDRATESAVGALVS 360

Query: 361 LCSGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYN 420
           LCS +EE RREAVAAGI TQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQ+SVGNSDDY 
Sbjct: 361 LCSASEENRREAVAAGILTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQESVGNSDDYG 420

Query: 421 CSEIVVQFC 428
           CSEIVV FC
Sbjct: 421 CSEIVVPFC 425

[Close]

BLAST of Sed0012856 vs. ExPASy TrEMBL
Match: A0A0A0L6F8 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G203270 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.5e-189
Identity = 355/429 (82.75%), Postives = 383/429 (89.28%), Query Frame = 0


Query: 1   MPAT--VAVQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCP 60
           MP T  VAVQPLDLSL IPYHFRCPISLELM DPVTV+TGQTYDRSSIE+WVATGNTTCP
Sbjct: 1   MPGTGSVAVQPLDLSLHIPYHFRCPISLELMRDPVTVSTGQTYDRSSIESWVATGNTTCP 60

Query: 61  VTRAFISDFTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSN 120
           VTRA ++DFTLIPNHTLRRLIQ+WCVANR +GVERIPTPKQPA+PSLVRS+LAQ SSRS+
Sbjct: 61  VTRAPLTDFTLIPNHTLRRLIQEWCVANRSYGVERIPTPKQPAEPSLVRSLLAQASSRSS 120

Query: 121 GFGSRISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRR 180
           G   RISALRRLKGLARDSD NRS+ISSLNA EIL+D++F +LD  S S     S  L R
Sbjct: 121 GSSLRISALRRLKGLARDSDKNRSLISSLNAREILLDVVFSNLDSGSDSF----SPDLSR 180

Query: 181 ESLAMIVMLPLTESECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSEL 240
           ESLA++VMLPLTESECVLVASDPQRI Y+S+LLFDSS+E RINAAALIE VIAGTR SEL
Sbjct: 181 ESLALLVMLPLTESECVLVASDPQRIGYLSHLLFDSSIEDRINAAALIETVIAGTRASEL 240

Query: 241 RGRICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDR 300
           R +ICG DE+FEGVVEILR   AYPRALKVG+KALFALCLVK TR KAVSAGA EI++DR
Sbjct: 241 RTQICGIDELFEGVVEILRDPTAYPRALKVGVKALFALCLVKQTRHKAVSAGAAEIIIDR 300

Query: 301 FHDLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVS 360
           F DLEKYDAERALAT+ELICRIP GC AF AHA+TVPLLVKVILKISDRATESAVGALVS
Sbjct: 301 FPDLEKYDAERALATIELICRIPTGCDAFAAHALTVPLLVKVILKISDRATESAVGALVS 360

Query: 361 LCSGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYN 420
           LCS +EE RREAVAAGI TQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQ+SVGNSDDY 
Sbjct: 361 LCSASEENRREAVAAGILTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQESVGNSDDYA 420

Query: 421 CSEIVVQFC 428
           CSEIVV FC
Sbjct: 421 CSEIVVPFC 425

[Close]

BLAST of Sed0012856 vs. ExPASy TrEMBL
Match: A0A6J1IYF7 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111480329 PE=4 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 3.3e-189
Identity = 348/426 (81.69%), Postives = 384/426 (90.14%), Query Frame = 0


Query: 1   MPATVAVQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCPVT 60
           MP +V V+PLDLS+QIPYHFRCPISLELM DPVTV+TGQTYDRSSIE+WVATGNTTCPVT
Sbjct: 1   MPGSVVVEPLDLSVQIPYHFRCPISLELMRDPVTVSTGQTYDRSSIESWVATGNTTCPVT 60

Query: 61  RAFISDFTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSNGF 120
           RA +++FTLIPNHTLRRLIQ+WCVANR +GVERIPTPKQPADPSLVRS+L Q SS+S+G 
Sbjct: 61  RAPLTEFTLIPNHTLRRLIQEWCVANRSYGVERIPTPKQPADPSLVRSLLGQASSKSSGS 120

Query: 121 GSRISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRRES 180
            SRISA+RRLKGLARDS+ NRS+ISSLNA EILID++F + D +SV      S  L RES
Sbjct: 121 SSRISAVRRLKGLARDSEKNRSLISSLNAREILIDVVFSNSDSDSV------SPDLSRES 180

Query: 181 LAMIVMLPLTESECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSELRG 240
           LA++VMLPLTESECVLVASDPQRI Y+S+LLFDSS+EVRINAAALIE+VIAGTR SELRG
Sbjct: 181 LALLVMLPLTESECVLVASDPQRIGYLSHLLFDSSIEVRINAAALIEIVIAGTRASELRG 240

Query: 241 RICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDRFH 300
           +IC  DE+FEGVVEILR   AYPRA+KVG+KALFALCLVK TR KAVSAGA EIL+DRF 
Sbjct: 241 QICAIDELFEGVVEILRDPTAYPRAVKVGVKALFALCLVKQTRHKAVSAGAAEILIDRFP 300

Query: 301 DLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVSLC 360
           DLEKYDAERALAT+ELICRIP G  AF AHA+TVPLLVKVILKISDRATESAVGALVSLC
Sbjct: 301 DLEKYDAERALATIELICRIPTGYDAFAAHALTVPLLVKVILKISDRATESAVGALVSLC 360

Query: 361 SGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYNCS 420
           S +EE RREAVAAGIFTQLLLLVQSDCT+RVKRKSQVLLKLLRDSWPQDSVGNSDDY CS
Sbjct: 361 SASEENRREAVAAGIFTQLLLLVQSDCTDRVKRKSQVLLKLLRDSWPQDSVGNSDDYGCS 420

Query: 421 EIVVQF 427
           EIV+ F
Sbjct: 421 EIVIPF 420

[Close]

BLAST of Sed0012856 vs. ExPASy TrEMBL
Match: A0A6J1FSF9 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111447739 PE=4 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 3.3e-189
Identity = 348/426 (81.69%), Postives = 384/426 (90.14%), Query Frame = 0


Query: 1   MPATVAVQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCPVT 60
           MP +V V+PLDLS+QIPYHFRCPISLELM DPVTV+TGQTYDRSSIE+WVATGNTTCPVT
Sbjct: 1   MPGSVVVEPLDLSVQIPYHFRCPISLELMRDPVTVSTGQTYDRSSIESWVATGNTTCPVT 60

Query: 61  RAFISDFTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSNGF 120
           RA +++FTLIPNHTLRRLIQ+WCVANR +GVERIPTPKQPADPSLVRS+L Q SS+S+G 
Sbjct: 61  RAPLTEFTLIPNHTLRRLIQEWCVANRSYGVERIPTPKQPADPSLVRSLLGQASSKSSGS 120

Query: 121 GSRISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRRES 180
            SRISA+RRLKGLARDS+ NRS+ISSLNA EILID++F + D +SV      S  L RES
Sbjct: 121 SSRISAVRRLKGLARDSEKNRSLISSLNAREILIDVVFSNSDSDSV------SPDLSRES 180

Query: 181 LAMIVMLPLTESECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSELRG 240
           LA++VMLPLTESECVLVASDPQRI Y+S+LLFDSS+EVRINAAALIE+VIAGTR SELRG
Sbjct: 181 LALLVMLPLTESECVLVASDPQRIGYLSHLLFDSSIEVRINAAALIEIVIAGTRASELRG 240

Query: 241 RICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDRFH 300
           +IC  DE+FEGVVEILR   AYPRA+KVG+KALFALCLVK TR KAVSAGA EIL+DRF 
Sbjct: 241 QICAIDELFEGVVEILRDPTAYPRAVKVGVKALFALCLVKQTRHKAVSAGAAEILIDRFP 300

Query: 301 DLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVSLC 360
           DLEKYDAERALAT+ELICRIP G  AF +HA+TVPLLVKVILKISDRATESAVGALVSLC
Sbjct: 301 DLEKYDAERALATIELICRIPTGYDAFASHALTVPLLVKVILKISDRATESAVGALVSLC 360

Query: 361 SGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYNCS 420
           S +EE RREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDY CS
Sbjct: 361 SASEENRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYGCS 420

Query: 421 EIVVQF 427
           EIV+ F
Sbjct: 421 EIVIPF 420

[Close]

BLAST of Sed0012856 vs. TAIR 10
Match: AT1G49780.1 (plant U-box 26 )

HSP 1 Score: 513.8 bits (1322), Expect = 1.3e-145
Identity = 262/420 (62.38%), Postives = 334/420 (79.52%), Query Frame = 0


Query: 7   VQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCPVTRAFISD 66
           ++PLDL +QIPYHFRCPISL+LM DPVT++TGQTYDR+SI++W+A GNTTCPVTR  +SD
Sbjct: 5   LEPLDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSD 64

Query: 67  FTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSN---GFGSR 126
           FTLIPNHTLRRLIQ+WCVANR  GVERIPTPKQPADP  VRS+L+Q S+ +       SR
Sbjct: 65  FTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSR 124

Query: 127 ISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRRESLAM 186
            +A+RRL+GLARDS+ NR +I+  NA EIL+ +LF D++  S+      S  L  ESLA+
Sbjct: 125 AAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSL------SSELVSESLAL 184

Query: 187 IVMLPLTESECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSELRGRIC 246
           +V+L +TE+EC  VASDP R+ +++ LLFDSS+E+R+NAAALIE+V+ G +  +L+  I 
Sbjct: 185 LVLLHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIIS 244

Query: 247 GTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDRF-HDL 306
           G+D IFEGV+++L+   +  RALK+GIKA+FALCLVK TR  A+SAGA  IL+DR   D 
Sbjct: 245 GSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADF 304

Query: 307 EKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVSLCSG 366
           ++ D ER LAT+EL+CR+P GCAAFG HA+TVPL+VK IL++SDRATE A GAL++LC+ 
Sbjct: 305 DRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTA 364

Query: 367 AEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQDSVGNSDDYNCSEI 423
            E  R EA AAG+ TQLLLLVQSDCTER KRK+Q+LLKLLRDSWP DS  +SDD+N SE+
Sbjct: 365 EERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHSDDFNRSEV 418

[Close]

BLAST of Sed0012856 vs. TAIR 10
Match: AT3G19380.1 (plant U-box 25 )

HSP 1 Score: 503.4 bits (1295), Expect = 1.7e-142
Identity = 265/427 (62.06%), Postives = 332/427 (77.75%), Query Frame = 0


Query: 7   VQPLDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATG-NTTCPVTRAFIS 66
           ++PLDL +QIPYHFRCPISLELM DPVTV TGQTYDR+SIE+WV+ G NTTCPVTRA +S
Sbjct: 5   IEPLDLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLS 64

Query: 67  DFTLIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSN---GFGS 126
           DFTLIPNHTLRRLIQ+WCVANR  GVERIPTPKQPADP+ VR++L+Q S+ +       S
Sbjct: 65  DFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRS 124

Query: 127 RISALRRLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRRESLA 186
           R +ALRRL+G ARDSD NR +I++ NA+EILI +LF          S T S  L  ESLA
Sbjct: 125 RAAALRRLRGFARDSDKNRVLIAAHNATEILIKILF----------SETTSSELVSESLA 184

Query: 187 MIVMLPLTE-SECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSELRGR 246
           ++VMLP+TE ++ V ++SDP R+ +++ LLFDSS+E R+NAAALIE+V  GT+ ++L+G 
Sbjct: 185 LLVMLPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGS 244

Query: 247 ICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGAVEILVDRF-H 306
           I  ++ +FEGV+++LR   +  RALK+GIK LFALC VKSTR  A++AGA EIL+DR   
Sbjct: 245 ISNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAA 304

Query: 307 DLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVSLC 366
           D ++ D ERALAT+EL+CR P GCAAFG HA+TVPLLVK IL++SDRATE A GAL++LC
Sbjct: 305 DFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALC 364

Query: 367 SGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQ-DSVGNSDDYNC 426
           +  E  R EA  AG+  QLLL+VQS+CTER K+K+Q LLKLLRDSWP  +S  NSDD+ C
Sbjct: 365 TAEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDYNSFANSDDFGC 421

[Close]

BLAST of Sed0012856 vs. TAIR 10
Match: AT2G35930.1 (plant U-box 23 )

HSP 1 Score: 181.4 bits (459), Expect = 1.5e-45
Identity = 129/409 (31.54%), Postives = 208/409 (50.86%), Query Frame = 0


Query: 10  LDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATG-NTTCPVTRAFISDFT 69
           +D  ++IP  F CPISLE+M DPV V+TG TYDR SIE W+  G   +CPVT+  I+D  
Sbjct: 6   MDEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDAD 65

Query: 70  LIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSNGFGSRISALR 129
           L PNHTLRRLIQ WC  N  +GVERIPTP+ P   S +  ++   +S      +++  L+
Sbjct: 66  LTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHE---NQVKCLK 125

Query: 130 RLKGLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRRESLAMIVMLP 189
           RL+ +  ++  N+  + +    E L +++  D    S + S+TD         A+ ++  
Sbjct: 126 RLRQIVSENATNKRCLEAAGVPEFLANIVSND----SENGSLTDE--------ALNLLYH 185

Query: 190 LTESECVLV-----ASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSELRGRIC 249
           L  SE VL        D   ++ ++ ++     E R+ A  L++ ++     ++    + 
Sbjct: 186 LETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNIL---EVADPMQSMT 245

Query: 250 GTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKAVSAGA----VEILVDRF 309
              E+F  VV+IL       +A K  +  L  +C     R KAV AG     +E+L+D  
Sbjct: 246 LKPEVFTEVVQIL-DDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDES 305

Query: 310 HDLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVSL 369
              E+   E A+  ++L+C+   G A F  H   + ++ K IL++S  A++ AV  L+S+
Sbjct: 306 FTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSV 365

Query: 370 --CSGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLLRDSW 407
                      E +  G+  +L L++Q  C  + K K++ LLKL    W
Sbjct: 366 GRFCATPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVW 395

[Close]

BLAST of Sed0012856 vs. TAIR 10
Match: AT3G52450.1 (plant U-box 22 )

HSP 1 Score: 177.6 bits (449), Expect = 2.2e-44
Identity = 124/426 (29.11%), Postives = 220/426 (51.64%), Query Frame = 0


Query: 10  LDLSLQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATG-NTTCPVTRAFISDFT 69
           +D  ++IP  F CPISL++M DPV V+TG TYDR SIE W+ +G   +CPVT+  I++  
Sbjct: 1   MDQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETD 60

Query: 70  LIPNHTLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSSRSNGFGSRISALR 129
           L PNHTLRRLIQ WC  N  +G+ERIPTPK P   S +  ++ + SS      +++  L+
Sbjct: 61  LTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSS---SHLNQVKCLK 120

Query: 130 RLKGLARDSDVNRSVISSLNASEILIDLLFLDLD-MESVSISVTDSD------------- 189
           RL+ +  ++  N+  + +    E L +++   +D   S S S++ S+             
Sbjct: 121 RLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENR 180

Query: 190 -----HLRRESLAMIVMLPLTESECVLVASDPQ---RIRYVSNLLFDSSVEVRINAAALI 249
                 L  E+L+++  L  +E+    + ++ +    ++ ++ ++     E R  AA L+
Sbjct: 181 FDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLL 240

Query: 250 EVVIAGTRDSELRGRICGTDEIFEGVVEILRRSPAYPRALKVGIKALFALCLVKSTRLKA 309
           + ++      ++   I    E+F  V++IL    ++ +A +  ++ L   C     R KA
Sbjct: 241 KKLLEVADPMQI---ILLERELFGEVIQILHDQISH-KATRSAMQILVITCPWGRNRHKA 300

Query: 310 VSAGA----VEILVDRFHDLEKYDAERALATMELICRIPGGCAAFGAHAVTVPLLVKVIL 369
           V  G     +E+L+D     E+ ++E A+  ++++C+   G A F  H   + ++ K IL
Sbjct: 301 VEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKIL 360

Query: 370 KISDRATESAVGALVSL--CSGAEERRREAVAAGIFTQLLLLVQSDCTERVKRKSQVLLK 407
           ++S   +E AV  L+S+          +E +  G+  +L L++Q  C  + K K++ LLK
Sbjct: 361 RVSQITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLK 419

[Close]

BLAST of Sed0012856 vs. TAIR 10
Match: AT5G37490.1 (ARM repeat superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 3.2e-43
Identity = 124/393 (31.55%), Postives = 204/393 (51.91%), Query Frame = 0


Query: 14  LQIPYHFRCPISLELMHDPVTVATGQTYDRSSIEAWVATGNTTCPVTRAFISDFTLIPNH 73
           + IP  F+CPIS++LM DPV ++TG TYDR SIE W+ +GN TCPVT   ++ F  IPNH
Sbjct: 29  ITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNH 88

Query: 74  TLRRLIQDWCVANRRFGVERIPTPKQPADPSLVRSILAQVSS--RSNGFGSRISALRRLK 133
           T+R++IQ WCV      ++RIPTP+ P  P  V  I  ++SS  R   +      + ++K
Sbjct: 89  TIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIEKIK 148

Query: 134 GLARDSDVNRSVISSLNASEILIDLLFLDLDMESVSISVTDSDHLRRESLAMIVMLPLTE 193
            L  +S+ NR  ++  +   +L D      D  S    +T    +  E L+++  +    
Sbjct: 149 KLGDESEKNRKCVNENSVGWVLCDC----FDKFSGDEKLT---FMLNEILSLLTWMFPIG 208

Query: 194 SECVLVASDPQRIRYVSNLLFDSSVEVRINAAALIEVVIAGTRDSELRGRICGTDEIFEG 253
            E +   +     R V+ LL  +   VR NAA +++ ++  + D          + + E 
Sbjct: 209 LEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEIL--SLDETRVHSFAVENGVAEA 268

Query: 254 VVEILRRSPAYPRALKVGIKALFALCLVK-STRLKAVSAGAVEILVDRFHDLEKYDAERA 313
           +V+++R S +   + K  + A++ + L K     + +  G V I V+   D E    E+A
Sbjct: 269 LVKLIRDSVS-SSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEKA 328

Query: 314 LATMELICRIPGGCAAFGAHAVTVPLLVKVILKISDRATESAVGALVSLC-SGAEERRRE 373
           LA ++ IC    G      +A+ +PLLVK I K+S+ AT S++  ++ L  +G      +
Sbjct: 329 LAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNTVAVED 388

Query: 374 AVAAGIFTQLLLLVQSDCTERVKRKSQVLLKLL 403
           AV  G F ++LL++Q    E  K K+  LLK++
Sbjct: 389 AVRLGAFQKVLLVLQVGYGEETKEKATELLKMM 411

The following BLAST results are available for this feature:

BLAST of Sed0012856 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875257.1	1.2e-190	82.52	U-box domain-containing protein 26-like isoform X2 [Benincasa hispida] >XP_03887...	[more]
XP_008456137.1	3.6e-190	82.75	PREDICTED: U-box domain-containing protein 26-like [Cucumis melo] >KAA0037126.1 ...	[more]
XP_004140703.1	3.0e-189	82.75	U-box domain-containing protein 26 [Cucumis sativus] >KGN57520.1 hypothetical pr...	[more]
XP_022981075.1	6.8e-189	81.69	U-box domain-containing protein 26-like [Cucurbita maxima]	[more]
XP_022942824.1	6.8e-189	81.69	U-box domain-containing protein 26-like [Cucurbita moschata] >KAG6600321.1 U-box...	[more]

BLAST of Sed0012856 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXA4	1.8e-144	62.38	U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2...	[more]
Q9LT79	2.4e-141	62.06	U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2...	[more]
Q84TG3	2.1e-44	31.54	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 ...	[more]
Q9SVC6	3.1e-43	29.11	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 ...	[more]
Q5PNY6	4.4e-42	31.55	U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2...	[more]

BLAST of Sed0012856 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T4S1	1.7e-190	82.75	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C380	1.7e-190	82.75	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103496167 PE=4 ...	[more]
A0A0A0L6F8	1.5e-189	82.75	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G203270 PE...	[more]
A0A6J1IYF7	3.3e-189	81.69	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111480329 P...	[more]
A0A6J1FSF9	3.3e-189	81.69	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111447739...	[more]

BLAST of Sed0012856 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49780.1	1.3e-145	62.38	plant U-box 26	[more]
AT3G19380.1	1.7e-142	62.06	plant U-box 25	[more]
AT2G35930.1	1.5e-45	31.54	plant U-box 23	[more]
AT3G52450.1	2.2e-44	29.11	plant U-box 22	[more]
AT5G37490.1	3.2e-43	31.55	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 19..82 e-value: 5.6E-31 score: 118.9
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 16..87 e-value: 4.5E-20 score: 71.6
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 15..89 score: 38.339031
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 96..422 e-value: 3.4E-18 score: 67.4
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 15..89 e-value: 6.6E-28 score: 98.6
None	No IPR available	PANTHER	PTHR22849:SF141	RING-TYPE E3 UBIQUITIN TRANSFERASE	coord: 7..423
None	No IPR available	PANTHER	PTHR22849	WDSAM1 PROTEIN	coord: 7..423
None	No IPR available	CDD	cd16664	RING-Ubox_PUB	coord: 20..61 e-value: 5.6444E-25 score: 94.6078
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 13..91
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 122..402

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012856.1	Sed0012856.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity