Sed0012756 (gene) Chayote v1

Overview


Name	Sed0012756
Type	gene
Organism	Sechium edule (Chayote v1)
Description	sister chromatid cohesion protein DCC1
Location	LG12: 1860787 .. 1863878 (-)
RNA-Seq Expression	Sed0012756
Synteny	Sed0012756

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGAATCGGTCGAGCGCGTAAAGAAATTCTTCGCCATTGTTCTTCTCGGAAAATCTCCAGCCGATTCTGCGTCAGTTTACGAAGGAAATTTCTTCACTACCATCGGTTTTTCAGCCTCGAAGTTACCGTCGATGTTCTAATCCGAATTATCGTTTCTGTAATTTTTGAGGTTTGTCTCTGATTCTGTAACTGTTCTTTTAGTTTCTTGCGAAGATGATGGATGAAATAACGACGGTGGCGCACTGAAAACACTGATTTCAAGCTTTCCAAGGTATTATTTCTGTTCATCGGACTGGATGTGTTGGTTCTGGTAGCGTTAATTTGATAGATTTGTGATGTAAACTTGTTCTAGGGTTTCGTTTTATATTCGACGAATTTTTGTTGCGAATTCGTCTTTTTATTTCTCTCTCTTTTTTTCCATTCATTTGAGAAATAAAAGTAAATTATTAATTTCGTGCCTATGTTTGATGAAAGTTTGAATTTAGTGTTTGTGATTTTAAAATCTAGAATTTAGTCCTTATGATTGAGGTGGAGTTGGCATTTAGTCGGTATGTTTTTAAAAACTAGAATTTAATCCATGTGGTATGATCAAATTTATAGTCATTCTGTTTTTAGTTATTGGCGAATTAAATATTTAAAAGTTAGTTATTTATGTGCGACTGTGTGAATAAGTCATCGATCGAACAAAACGAATAACATCTTTTACCATCAGGAATGATAATGACTATTTTTTTTTTGTTTTTATCTAACCTTAAAGACTAAATTTTAACTTTCTCTAAACTATAGTGACTAAATTCTAGATTTTAAAATCTCTGAGACGAATTTCTAATTTTCATCTAATTGTAGGGATTAAATGTATAATTTACACGAAAAATAATAAGTGAAAACGTGGCAGTCGTGTTATGTGATTTATAGAGTTTTGGTTTTCTATAATTCTGAATTCAGTTGTCCCAAGGGGTGGCACAGTAATTGAAGACTTGAGTTTTGAGGGTATGCTCCCCTCCTCAAGGTCCTAGATTTGAAACTCACCTGTGACATTACTCTTTCGATGTCTCCGGTGCCTGGACTAAGGATGGGCGTAGTTACCTTATTTCAAAAAGAATAATTCTGAACTCAGTTGGATTTGTTAGATGCTGAGAATAACAACTTAGAATCTTTGATTATATAGCTAAATGTTGTAGGACTCTTTTCATGGTTGTTGTTAGGGATCTTGACTTTCTGTATGTGTAATATTTAGTGTATACTCTTGAATGTGCAAAATTGAGATTAATTCTTGTTCAATAGTTATGTAGACATATAGTTAGAAACTTAGGCATAGTTCACGAATTATTTTGGTTCCTTTTTGGAAGATGGAGCAGAAATATCCGCATGGAAGAGGAGCTGATGCAGTTTTACATCTTCAGCCAAACTCCTCAATTTCTATTGCATATCACCCACTCTTTGGTCCACATGATGATTTAGTTCTTCTTGAGGTCGATGAAAAGCTTCTCGAGGAAGTTCTCCACCAACGGTAAATACGGCGGATTATAAGTTACTTGCTAATGTGTTAGAACTCTTCGAATTTGTCTAACTTTGAGGATTTCTTTTTGCAGAGTAAGCATCAGAGGACAGTCGGAAGAAGAAGCCGTCTTTTGCACGAAGTCGAAAACTTATGGAATCAAATATGTAGGAACTTCCAATTCTGTACTCCTCATACCCCCATTAAGTCGATCGGAATACTACGAAAACGAAATAGATAGCCTTGAGAATGATGGCTCTAAAGAAGTTGCACCTGTGATTAAAGTTGCTCCAGGGTTCATGGAACTTGTTGAGATTTCTCCCAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGAAACCTTACAGCTTATCCGAAGAGTGGGAAAGCGAAGAGATGGACAAACATGAAAATGGAATTTATAACTGGGATGATCTTAGGGACAAGGTTCAGGCTAGCGACGATGAATTGAAAGCTGGATTACAAGTACTTTCCGCCGTTGAGATTGATGGGCACTGGAGACTTGTGGACGAAAAATACATGGACTCCATACTACAGATGCTTTTGAATAACCGAATTTTAAACGATTGGTCTCTGGATGCACTTGATGAATGCGTAATCGTGAAAGTGATGGAATTAGATGGCTTTCCTGAAAAACTGGTGCATCATTGTCTCCAAGTTTATGGTGATAAATTGGATGGAAATGAGGGGACTATCTGTTTATGGAGATTGGACGAGAAACGGGTTTGTGTTCATTTTGCAAGAGAAGTTTTGAAGAAAGGAAAGATGAAGCTGGAGCATTTCATGGATGAATGGATACGAAAAATCCCATTGGGAATGTGTGCCAACTTCGACATGTTAGACGGTGAAGTTCTGACTGAGAGACTCGGCGTTGAGACGTGGGTTCGTGGTTTTAGAGCTTCTTCATTTCCATCGAATCCTGCTGAACGATTCAACATTTTGTTTAGAGAACGACCAAAATGGGAGTGGAAGGATCTGCATCCCTTTATCAGGTTTGCTTATAAATGTATAGCTGTCTTATTATTGGTTTACTGAAACCTGGAAACTCTAACAACTATGATTTGGTTTTCAGAGATCTTACCGTTCCGGGTCTTTCATCGGAAGGTTTGCTTCTCAAATACACCCGAAGAACTCAATCGAACCCGAAAGACGAGCCGGTATTCAGTGCGAGATAAATGATATGTTGCGCTAGCCGCTATGTTCACATCTGCTGTTAAAGACTGGTTTGTAGATTGTTCAATGCTACAACTGGCTTAAGCTTATTGTATTCATGGACCCAAAAGCCTTAAACTTTGCTTTGTTTATAGGGCTCCATCACTCCTAGAATTGAGATCCAAAGTTCCTCGTTCTCACTTTCAGACATGAAACTTTTAGGAGAAGTTAATTTTTCATTTGATTGCAGACTTTGTACAATTGCCATTGATGAAAGTAATGGAGGATTGAAGACTCAAGGTTTTACACTTTCTACTTTAAACTAAGCTCTTTGTGTCAAGATTAAGCCTGTACAGTGAGACAAAGAGAACACTGTGATTTCTTTTAAAAACAAAGGGGCTTGAACTTATTTGTATGGGAC

mRNA sequence

CGGGAATCGGTCGAGCGCGTAAAGAAATTCTTCGCCATTGTTCTTCTCGGAAAATCTCCAGCCGATTCTGCGTCAGTTTACGAAGGAAATTTCTTCACTACCATCGGTTTTTCAGCCTCGAAGTTACCGTCGATGTTCTAATCCGAATTATCGTTTCTGTAATTTTTGAGGTTTGTCTCTGATTCTGTAACTGTTCTTTTAGTTTCTTGCGAAGATGATGGATGAAATAACGACGGTGGCGCACTGAAAACACTGATTTCAAGCTTTCCAAGATGGAGCAGAAATATCCGCATGGAAGAGGAGCTGATGCAGTTTTACATCTTCAGCCAAACTCCTCAATTTCTATTGCATATCACCCACTCTTTGGTCCACATGATGATTTAGTTCTTCTTGAGGTCGATGAAAAGCTTCTCGAGGAAGTTCTCCACCAACGAGTAAGCATCAGAGGACAGTCGGAAGAAGAAGCCGTCTTTTGCACGAAGTCGAAAACTTATGGAATCAAATATGTAGGAACTTCCAATTCTGTACTCCTCATACCCCCATTAAGTCGATCGGAATACTACGAAAACGAAATAGATAGCCTTGAGAATGATGGCTCTAAAGAAGTTGCACCTGTGATTAAAGTTGCTCCAGGGTTCATGGAACTTGTTGAGATTTCTCCCAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGAAACCTTACAGCTTATCCGAAGAGTGGGAAAGCGAAGAGATGGACAAACATGAAAATGGAATTTATAACTGGGATGATCTTAGGGACAAGGTTCAGGCTAGCGACGATGAATTGAAAGCTGGATTACAAGTACTTTCCGCCGTTGAGATTGATGGGCACTGGAGACTTGTGGACGAAAAATACATGGACTCCATACTACAGATGCTTTTGAATAACCGAATTTTAAACGATTGGTCTCTGGATGCACTTGATGAATGCGTAATCGTGAAAGTGATGGAATTAGATGGCTTTCCTGAAAAACTGGTGCATCATTGTCTCCAAGTTTATGGTGATAAATTGGATGGAAATGAGGGGACTATCTGTTTATGGAGATTGGACGAGAAACGGGTTTGTGTTCATTTTGCAAGAGAAGTTTTGAAGAAAGGAAAGATGAAGCTGGAGCATTTCATGGATGAATGGATACGAAAAATCCCATTGGGAATGTGTGCCAACTTCGACATGTTAGACGGTGAAGTTCTGACTGAGAGACTCGGCGTTGAGACGTGGGTTCGTGGTTTTAGAGCTTCTTCATTTCCATCGAATCCTGCTGAACGATTCAACATTTTGTTTAGAGAACGACCAAAATGGGAGTGGAAGGATCTGCATCCCTTTATCAGAGATCTTACCGTTCCGGGTCTTTCATCGGAAGGTTTGCTTCTCAAATACACCCGAAGAACTCAATCGAACCCGAAAGACGAGCCGGTATTCAGTGCGAGATAAATGATATGTTGCGCTAGCCGCTATGTTCACATCTGCTGTTAAAGACTGGTTTGTAGATTGTTCAATGCTACAACTGGCTTAAGCTTATTGTATTCATGGACCCAAAAGCCTTAAACTTTGCTTTGTTTATAGGGCTCCATCACTCCTAGAATTGAGATCCAAAGTTCCTCGTTCTCACTTTCAGACATGAAACTTTTAGGAGAAGTTAATTTTTCATTTGATTGCAGACTTTGTACAATTGCCATTGATGAAAGTAATGGAGGATTGAAGACTCAAGGTTTTACACTTTCTACTTTAAACTAAGCTCTTTGTGTCAAGATTAAGCCTGTACAGTGAGACAAAGAGAACACTGTGATTTCTTTTAAAAACAAAGGGGCTTGAACTTATTTGTATGGGAC

Coding sequence (CDS)

ATGGAGCAGAAATATCCGCATGGAAGAGGAGCTGATGCAGTTTTACATCTTCAGCCAAACTCCTCAATTTCTATTGCATATCACCCACTCTTTGGTCCACATGATGATTTAGTTCTTCTTGAGGTCGATGAAAAGCTTCTCGAGGAAGTTCTCCACCAACGAGTAAGCATCAGAGGACAGTCGGAAGAAGAAGCCGTCTTTTGCACGAAGTCGAAAACTTATGGAATCAAATATGTAGGAACTTCCAATTCTGTACTCCTCATACCCCCATTAAGTCGATCGGAATACTACGAAAACGAAATAGATAGCCTTGAGAATGATGGCTCTAAAGAAGTTGCACCTGTGATTAAAGTTGCTCCAGGGTTCATGGAACTTGTTGAGATTTCTCCCAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGAAACCTTACAGCTTATCCGAAGAGTGGGAAAGCGAAGAGATGGACAAACATGAAAATGGAATTTATAACTGGGATGATCTTAGGGACAAGGTTCAGGCTAGCGACGATGAATTGAAAGCTGGATTACAAGTACTTTCCGCCGTTGAGATTGATGGGCACTGGAGACTTGTGGACGAAAAATACATGGACTCCATACTACAGATGCTTTTGAATAACCGAATTTTAAACGATTGGTCTCTGGATGCACTTGATGAATGCGTAATCGTGAAAGTGATGGAATTAGATGGCTTTCCTGAAAAACTGGTGCATCATTGTCTCCAAGTTTATGGTGATAAATTGGATGGAAATGAGGGGACTATCTGTTTATGGAGATTGGACGAGAAACGGGTTTGTGTTCATTTTGCAAGAGAAGTTTTGAAGAAAGGAAAGATGAAGCTGGAGCATTTCATGGATGAATGGATACGAAAAATCCCATTGGGAATGTGTGCCAACTTCGACATGTTAGACGGTGAAGTTCTGACTGAGAGACTCGGCGTTGAGACGTGGGTTCGTGGTTTTAGAGCTTCTTCATTTCCATCGAATCCTGCTGAACGATTCAACATTTTGTTTAGAGAACGACCAAAATGGGAGTGGAAGGATCTGCATCCCTTTATCAGAGATCTTACCGTTCCGGGTCTTTCATCGGAAGGTTTGCTTCTCAAATACACCCGAAGAACTCAATCGAACCCGAAAGACGAGCCGGTATTCAGTGCGAGATAA

Protein sequence

MEQKYPHGRGADAVLHLQPNSSISIAYHPLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQSEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRSEYYENEIDSLENDGSKEVAPVIKVAPGFMELVEISPRIDKLKLLLSEKPYSLSEEWESEEMDKHENGIYNWDDLRDKVQASDDELKAGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNRILNDWSLDALDECVIVKVMELDGFPEKLVHHCLQVYGDKLDGNEGTICLWRLDEKRVCVHFAREVLKKGKMKLEHFMDEWIRKIPLGMCANFDMLDGEVLTERLGVETWVRGFRASSFPSNPAERFNILFRERPKWEWKDLHPFIRDLTVPGLSSEGLLLKYTRRTQSNPKDEPVFSAR

Homology

[Close]

BLAST of Sed0012756 vs. NCBI nr
Match: XP_038879383.1 (sister chromatid cohesion protein DCC1 [Benincasa hispida] >XP_038879394.1 sister chromatid cohesion protein DCC1 [Benincasa hispida])

HSP 1 Score: 689.9 bits (1779), Expect = 1.3e-194
Identity = 334/393 (84.99%), Postives = 362/393 (92.11%), Query Frame = 0


Query: 1   MEQKYPHGRGADAVLHLQPNSSISIAYHPLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+Y HGRGADAVLHLQPNSSISIAYHPLF PHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQYLHGRGADAVLHLQPNSSISIAYHPLFCPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  SEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRSEYYENEIDSLENDGSKEVAPVIKVAP 120
            E++AVFCTKS+TYGIKYVGTSNSVLLIPP   SEYYENE+DS + DG+KEVA VIKVAP
Sbjct: 61  PEDDAVFCTKSRTYGIKYVGTSNSVLLIPPSGLSEYYENELDSHQKDGTKEVAHVIKVAP 120

Query: 121 GFMELVEISPRIDKLKLLLSEKPYSLSEEWESEEMDKHENGIYNWDDLRDKVQASDDELK 180
           G MEL EI+PRIDKLKLLLSE+PYSL++EWES+E+DKHE  +YNWDDL +KVQASDDELK
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEPYSLADEWESKEVDKHEKRMYNWDDLINKVQASDDELK 180

Query: 181 AGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNRILNDWSLDALDECVIVKVMELDGFPE 240
           AGLQ LSAVEIDG+WR+VDEKYM+S+LQMLLNN ILNDWS DALDE VI+KVM++DGFPE
Sbjct: 181 AGLQALSAVEIDGYWRVVDEKYMESMLQMLLNNTILNDWSPDALDEGVIMKVMKMDGFPE 240

Query: 241 KLVHHCLQVYGDKLDGNEGTICLWRLDEKRVCVHFAREVLKKGKMKLEHFMDEWIRKIPL 300
           KLV HCL VYGDKLDG+EG  CLWRLDEKRVCVHFAREVL++GKMKLEHFMDEW RKIPL
Sbjct: 241 KLVQHCLHVYGDKLDGDEGKSCLWRLDEKRVCVHFAREVLREGKMKLEHFMDEWRRKIPL 300

Query: 301 GMCANFDMLDGEVLTERLGVETWVRGFRASSFPSNPAERFNILFRERPKWEWKDLHPFIR 360
           GM ANFDML+GEVLTERLGVETWVRGFR  S PSNPAERF ILFRERPKWEWKDL P+IR
Sbjct: 301 GMRANFDMLEGEVLTERLGVETWVRGFRVCSLPSNPAERFTILFRERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQSNPKDEPVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQSNP+ E VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQSNPEAEAVFSAR 393

[Close]

BLAST of Sed0012756 vs. NCBI nr
Match: XP_008438251.1 (PREDICTED: sister chromatid cohesion protein DCC1 [Cucumis melo] >KAA0049092.1 sister chromatid cohesion protein DCC1 [Cucumis melo var. makuwa] >TYK17471.1 sister chromatid cohesion protein DCC1 [Cucumis melo var. makuwa])

HSP 1 Score: 689.9 bits (1779), Expect = 1.3e-194
Identity = 332/393 (84.48%), Postives = 360/393 (91.60%), Query Frame = 0


Query: 1   MEQKYPHGRGADAVLHLQPNSSISIAYHPLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+ PHGRGADAVL+LQPNSSISIAYH LFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  SEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRSEYYENEIDSLENDGSKEVAPVIKVAP 120
            EE+AVFCTKSKTYGIKYVGTSNSVLLIPP  RSEYY+NE+DS + D SKEVAPVIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYKNELDSHQTDNSKEVAPVIKVAP 120

Query: 121 GFMELVEISPRIDKLKLLLSEKPYSLSEEWESEEMDKHENGIYNWDDLRDKVQASDDELK 180
           G MEL EI+PRIDKLKLLLSE+PYS ++EWE+E  DK+E  +Y+WDDL +KVQASDDELK
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEPYSFADEWENEAADKYEKRMYSWDDLINKVQASDDELK 180

Query: 181 AGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNRILNDWSLDALDECVIVKVMELDGFPE 240
           AGLQ LSAVEIDG+WR+VDEKYMDS+LQMLL+NRILNDWSLDALDE VI+KVM++DGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEDVIMKVMKMDGFPE 240

Query: 241 KLVHHCLQVYGDKLDGNEGTICLWRLDEKRVCVHFAREVLKKGKMKLEHFMDEWIRKIPL 300
           KLV HCL VYGDKLDGNEG  CLWRLDEKRVCVHFAREVL+KGKMKLEH MDEW +KIPL
Sbjct: 241 KLVQHCLHVYGDKLDGNEGKSCLWRLDEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 301 GMCANFDMLDGEVLTERLGVETWVRGFRASSFPSNPAERFNILFRERPKWEWKDLHPFIR 360
           GMCANFDML+GEVLTERLGVETWVRGFR    PSNPAERF ILF+ERPKWEWKDL P+IR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQSNPKDEPVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQ NP+ E VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

[Close]

BLAST of Sed0012756 vs. NCBI nr
Match: XP_022974980.1 (sister chromatid cohesion protein DCC1 [Cucurbita maxima])

HSP 1 Score: 689.9 bits (1779), Expect = 1.3e-194
Identity = 331/393 (84.22%), Postives = 362/393 (92.11%), Query Frame = 0


Query: 1   MEQKYPHGRGADAVLHLQPNSSISIAYHPLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+ PHGRGADAVL+LQPNSS++IAYH LFGPHDDLVLLEVDEKLLEEVLH+RVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSVAIAYHSLFGPHDDLVLLEVDEKLLEEVLHERVSIRGQ 60

Query: 61  SEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRSEYYENEIDSLENDGSKEVAPVIKVAP 120
           +EEEAVFCTKSKTYGIKYVGTSNSVLLIPP  RSEYYENE+DS  ND +KEV PVIK+AP
Sbjct: 61  AEEEAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYENELDSQGNDSTKEVVPVIKLAP 120

Query: 121 GFMELVEISPRIDKLKLLLSEKPYSLSEEWESEEMDKHENGIYNWDDLRDKVQASDDELK 180
           G MELVEI+PRIDKLKLLLSE PYSL++EWESEEMDK E  +YNW+DL DKVQASDDELK
Sbjct: 121 GIMELVEIAPRIDKLKLLLSENPYSLADEWESEEMDKCEKQMYNWNDLLDKVQASDDELK 180

Query: 181 AGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNRILNDWSLDALDECVIVKVMELDGFPE 240
           AGL+ LSAVEIDG+WRLVDEKYMDS+LQMLLNNRILNDWSLDALDE V++KVM++DGF E
Sbjct: 181 AGLRALSAVEIDGYWRLVDEKYMDSMLQMLLNNRILNDWSLDALDEGVLMKVMKMDGFSE 240

Query: 241 KLVHHCLQVYGDKLDGNEGTICLWRLDEKRVCVHFAREVLKKGKMKLEHFMDEWIRKIPL 300
            LVHHCL VYGDKL+G+EG  CLWRLDEKRVCVHFAREVL+KGKMK+EHFMDEW +KIP+
Sbjct: 241 TLVHHCLDVYGDKLEGDEGNSCLWRLDEKRVCVHFAREVLRKGKMKVEHFMDEWQKKIPV 300

Query: 301 GMCANFDMLDGEVLTERLGVETWVRGFRASSFPSNPAERFNILFRERPKWEWKDLHPFIR 360
            M ANFDML+GEVLTERLGVETWVRGFR SS P NP ERF+ILFRERPKWEWKDL P+IR
Sbjct: 301 EMHANFDMLEGEVLTERLGVETWVRGFRVSSLPLNPVERFSILFRERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQSNPKDEPVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQ NP+ EPVFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEPVFSAR 393

[Close]

BLAST of Sed0012756 vs. NCBI nr
Match: KAG7028709.1 (Sister chromatid cohesion protein DCC1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 689.5 bits (1778), Expect = 1.7e-194
Identity = 331/393 (84.22%), Postives = 361/393 (91.86%), Query Frame = 0


Query: 1   MEQKYPHGRGADAVLHLQPNSSISIAYHPLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+ PHGRGADAVLHLQPNSS++IAYH LFGPHDDLVLLEVDEKLLEEVLH+RVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLHLQPNSSVAIAYHSLFGPHDDLVLLEVDEKLLEEVLHERVSIRGQ 60

Query: 61  SEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRSEYYENEIDSLENDGSKEVAPVIKVAP 120
           +EEEAVFCTKSKTYGIKYVGTSNSVLLIPP  RSEYYENE+DS  ND +KEV PVIK+AP
Sbjct: 61  AEEEAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYENELDSHGNDSTKEVVPVIKLAP 120

Query: 121 GFMELVEISPRIDKLKLLLSEKPYSLSEEWESEEMDKHENGIYNWDDLRDKVQASDDELK 180
           G MELVEI+PRIDKLKLLLSE PYSL++EWESEEMDK E   Y+W+DL DKVQASDDELK
Sbjct: 121 GIMELVEIAPRIDKLKLLLSENPYSLADEWESEEMDKCEKQKYSWNDLLDKVQASDDELK 180

Query: 181 AGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNRILNDWSLDALDECVIVKVMELDGFPE 240
           AGLQ LSAVEIDG+WRLVDE+YMDS+LQMLLNNRILNDWSLDALDE V++KVM++DGF E
Sbjct: 181 AGLQALSAVEIDGYWRLVDEQYMDSMLQMLLNNRILNDWSLDALDEVVLMKVMKMDGFSE 240

Query: 241 KLVHHCLQVYGDKLDGNEGTICLWRLDEKRVCVHFAREVLKKGKMKLEHFMDEWIRKIPL 300
            LVHHCL VYGDKL+G+EG  CLWRLDEKRVCVHFAREVL+KGKMK+EHFMDEW +KIP+
Sbjct: 241 TLVHHCLDVYGDKLEGDEGNSCLWRLDEKRVCVHFAREVLRKGKMKVEHFMDEWQKKIPV 300

Query: 301 GMCANFDMLDGEVLTERLGVETWVRGFRASSFPSNPAERFNILFRERPKWEWKDLHPFIR 360
            M ANFDML+GEVLTERLGVETWVRGFR SS P NP ERF+ILFRERPKWEWKDL P+IR
Sbjct: 301 EMHANFDMLEGEVLTERLGVETWVRGFRVSSLPLNPVERFSILFRERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQSNPKDEPVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQ NP+ EPVFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEPVFSAR 393

[Close]

BLAST of Sed0012756 vs. NCBI nr
Match: XP_022937673.1 (sister chromatid cohesion protein DCC1 [Cucurbita moschata])

HSP 1 Score: 688.3 bits (1775), Expect = 3.8e-194
Identity = 329/393 (83.72%), Postives = 362/393 (92.11%), Query Frame = 0


Query: 1   MEQKYPHGRGADAVLHLQPNSSISIAYHPLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+ PHGRGADAVLHLQPNSS++IAYH LFGPHDDLVLLEVDEKLLEEVLH+RVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLHLQPNSSVAIAYHSLFGPHDDLVLLEVDEKLLEEVLHERVSIRGQ 60

Query: 61  SEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRSEYYENEIDSLENDGSKEVAPVIKVAP 120
           +EEEAVFCTKSKTYGIKYVGTSNSVLLIPP  RSEYYENE+DS  ND +KEV PVIK+AP
Sbjct: 61  AEEEAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYENELDSHGNDSTKEVVPVIKLAP 120

Query: 121 GFMELVEISPRIDKLKLLLSEKPYSLSEEWESEEMDKHENGIYNWDDLRDKVQASDDELK 180
           G MELVEI+PRIDKLKLLLSE PYSL++EWESEEMDK E  +Y+W+DL DKVQASDDELK
Sbjct: 121 GIMELVEIAPRIDKLKLLLSENPYSLADEWESEEMDKCEKQMYSWNDLLDKVQASDDELK 180

Query: 181 AGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNRILNDWSLDALDECVIVKVMELDGFPE 240
           AGLQ LSAVEIDG+WRLVDE+YMDS+LQMLLNNRILNDWSLDALDE V++KVM++DGF E
Sbjct: 181 AGLQALSAVEIDGYWRLVDEQYMDSMLQMLLNNRILNDWSLDALDEVVLMKVMKMDGFSE 240

Query: 241 KLVHHCLQVYGDKLDGNEGTICLWRLDEKRVCVHFAREVLKKGKMKLEHFMDEWIRKIPL 300
            LVHHCL VYGDKL+G+EG  CLWRLDEKRVCVHFAREVL+KGKMK+EHFMDEW +KIP+
Sbjct: 241 TLVHHCLDVYGDKLEGDEGNSCLWRLDEKRVCVHFAREVLRKGKMKVEHFMDEWQKKIPV 300

Query: 301 GMCANFDMLDGEVLTERLGVETWVRGFRASSFPSNPAERFNILFRERPKWEWKDLHPFIR 360
            M ANF+ML+GEVLTERLGVETWVRGFR SS P NP ERF+ILFRERPKWEWKDL P+IR
Sbjct: 301 EMHANFEMLEGEVLTERLGVETWVRGFRVSSLPLNPVERFSILFRERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQSNPKDEPVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQ NP+ EP+FSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEPMFSAR 393

[Close]

BLAST of Sed0012756 vs. ExPASy Swiss-Prot
Match: Q14AI0 (Sister chromatid cohesion protein DCC1 OS=Mus musculus OX=10090 GN=DSCC1 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.9e-40
Identity = 107/351 (30.48%), Postives = 171/351 (48.72%), Query Frame = 0


Query: 36  DLVLLEVDEKLLEEV-LHQRVSIRGQSEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRS 95
           D  LLE++  L +++       IRG  +E+AV C+K KTY +K   TSN +L IP     
Sbjct: 48  DFCLLELEPALCQQLEAGDSFVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPGCKTP 107

Query: 96  EYYENEIDSLENDGSKEVAPVIKVAPGFMELVEISPRIDKLKLLLSEKPYSLSEEWESEE 155
           +  + E    E   +     +   +  + EL    P++ KLK LL E  Y   +  + E+
Sbjct: 108 DQLKEE----ETPSAIVHTEIFGFSNNYWELRRCRPKLKKLKRLLMENTYEGPDSQKEED 167

Query: 156 MDKHENGIYNWDDLRDKVQASDDELKAGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNR 215
             + +   Y  +DL + +QAS++E+ A LQVL+A EI G+WR+++  Y   +L  +    
Sbjct: 168 ASRSK---YTTEDLLNHIQASEEEIMAQLQVLNACEIGGYWRILEFDYEIKLLNHVTQLV 227

Query: 216 ILNDWSLDALDECVIVKVMELDGF-PEKLVHHCLQVYGDKLDGNEGTICLWRLDEKRVCV 275
               WSLD +   + V + EL    PE+++ HCL+ YG +    +     + LD  ++C 
Sbjct: 228 DSESWSLDRVP--LTVCLQELGPLEPEEMIEHCLKCYGKRYVDKDDV--YFELDADKICR 287

Query: 276 HFAREVLKKG-KMKLEHFMDEWIRKIPLGMCANFDMLDGEVLTERLGVETWVRGFRASSF 335
             A  +L+   K  L  F + W + +P GM    D L G  L +R      +   +    
Sbjct: 288 VTAEMLLQNAVKFNLAEFQEVWQQSVPEGMTTRLDQLKGLALVDRNSRPEIIFLLKVDDL 347

Query: 336 PSNPAERFNILFRERPKWEWKDLHPFIRDLTVPGLSSEGLLLKYTRRTQSN 384
           P    +RFN LF  R KW  +D+ P+I+DL     +   LL KY+R +  N
Sbjct: 348 PEGTQDRFNSLFSLREKWTEEDITPYIQDLCGEKQTIGALLTKYSRSSMQN 387

[Close]

BLAST of Sed0012756 vs. ExPASy Swiss-Prot
Match: Q9BVC3 (Sister chromatid cohesion protein DCC1 OS=Homo sapiens OX=9606 GN=DSCC1 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 5.0e-40
Identity = 114/353 (32.29%), Postives = 178/353 (50.42%), Query Frame = 0


Query: 36  DLVLLEVDEKLLEEVLH-QRVSIRGQSEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRS 95
           D  LLE++  L +++     + IRG  +E+AV C+K KTY +K   TSN +L IP     
Sbjct: 42  DFCLLELEPTLCQQLEDGHSLVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPGCKTP 101

Query: 96  EYYENEIDSLENDGSKEVAPVIKVAPGFMELVEISPRIDKLKLLLSEKPYSLSEEWESEE 155
           +  + E DS  N    E   +   +  + EL    P++ KLK LL E PY   E  +S++
Sbjct: 102 DQLKKE-DSHCNIIHTE---IFGFSNNYWELRRRRPKLKKLKKLLMENPY---EGPDSQK 161

Query: 156 MDKHENGIYNWDDLRDKVQASDDELKAGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNR 215
                +  Y  +DL D++QAS++E+   LQVL+A +I G+WR+++  Y   +L  +    
Sbjct: 162 EKDSNSSKYTTEDLLDQIQASEEEIMTQLQVLNACKIGGYWRILEFDYEMKLLNHVTQLV 221

Query: 216 ILNDWSLD--ALDECVIVKVMELDGF-PEKLVHHCLQVYGDKLDGNEGTICLWRLDEKRV 275
               WS     L+ C    + EL    PE+++ HCL+ YG K   +EG +  + LD  ++
Sbjct: 222 DSESWSFGKVPLNTC----LQELGPLEPEEMIEHCLKCYGKKY-VDEGEV-YFELDADKI 281

Query: 276 CVHFAREVLKKG-KMKLEHFMDEWIRKIPLGMCANFDMLDGEVLTERLGVETWVRGFRAS 335
           C   AR +L+   K  L  F + W + +P GM  + D L G  L +R      +   +  
Sbjct: 282 CRAAARMLLQNAVKFNLAEFQEVWQQSVPEGMVTSLDQLKGLALVDRHSRPEIIFLLKVD 341

Query: 336 SFPSNPAERFNILFRERPKWEWKDLHPFIRDLTVPGLSSEGLLLKYTRRTQSN 384
             P +  ERFN LF  R KW  +D+ P+I+DL     +   LL KY+  +  N
Sbjct: 342 DLPEDNQERFNSLFSLREKWTEEDIAPYIQDLCGEKQTIGALLTKYSHSSMQN 381

[Close]

BLAST of Sed0012756 vs. ExPASy Swiss-Prot
Match: Q66I84 (Sister chromatid cohesion protein DCC1 OS=Danio rerio OX=7955 GN=dscc1 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.5e-39
Identity = 109/352 (30.97%), Postives = 170/352 (48.30%), Query Frame = 0


Query: 36  DLVLLEVDEKLLEEV-LHQRVSIRGQSEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRS 95
           D  L+EVDE L + +   + + IRG  +E AV C++ KTY +K   TSN +L +P     
Sbjct: 38  DYCLMEVDENLCKHIESGKSLIIRGDKDEHAVLCSEDKTYDLKIADTSNLLLFVPGCKTP 97

Query: 96  EYYENEIDSLENDGSKEVAPVIKVAPGFMELVEISPRIDKLKLLLSEKPYSLSEEWESEE 155
           +    ++  +          +   +  + EL    PR+ KLK LL E PY    +     
Sbjct: 98  D----QLSDIPASPQLMHTQIWGFSNCYWELRRQRPRLKKLKKLLMENPY----DGPPVG 157

Query: 156 MDKHENGI-YNWDDLRDKVQASDDELKAGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNN 215
           M +   G+ Y+ +DL +++QAS +EL+A L  + A EIDG WR++D  Y   +L  +   
Sbjct: 158 MQEEAPGLKYSMEDLLERIQASKEELEAHLGNVHACEIDGFWRILDFDYEMKLLGHVTQL 217

Query: 216 RILNDWSLDALDECVIVKVMELDGF-PEKLVHHCLQVYGDKLDGNEGTICLWRLDEKRVC 275
                WS   +   V ++  EL    P+ ++ HCL  YG +   +E    ++ LDE +VC
Sbjct: 218 VDSESWSFSKVPLSVCLE--ELGSLEPKAMIEHCLNCYG-RRHSDEDNQVMYALDEDKVC 277

Query: 276 VHFAREVLKKG-KMKLEHFMDEWIRKIPLGMCANFDMLDGEVLTERLGVETWVRGFRASS 335
              A+ +L+   K  L  F + W + +P GM    D L G  L +R      +   R   
Sbjct: 278 RATAQLLLQNAVKFNLSEFQEVWQQSVPEGMGTRLDQLRGLALIDRSSKPETISLLRVED 337

Query: 336 FPSNPAERFNILFRERPKWEWKDLHPFIRDLTVPGLSSEGLLLKYTRRTQSN 384
            P +  ERFN LF  R KW   D+ P+I+DL     ++  LL K+ R +  N
Sbjct: 338 LPEDTLERFNSLFSLREKWTQDDIEPYIQDLCGEKQTTGALLTKHARSSMQN 378

[Close]

BLAST of Sed0012756 vs. ExPASy Swiss-Prot
Match: Q6GL75 (Sister chromatid cohesion protein DCC1 OS=Xenopus tropicalis OX=8364 GN=dscc1 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.3e-37
Identity = 106/353 (30.03%), Postives = 167/353 (47.31%), Query Frame = 0


Query: 36  DLVLLEVDEKLLEEV-LHQRVSIRGQSEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRS 95
           D  L+E+D+ L +++     + IRG   + AV C++ KTY +K   TSN +L IP     
Sbjct: 39  DYSLMELDDTLCKQIEAGDSLVIRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIPGCKTP 98

Query: 96  EYYENEIDSLENDGSKEVAPVIKVAPGFMELVEISPRIDKLKLLLSEKPYSLSEEWESEE 155
           +    +   L     +    +   +  + EL    P++ KLK LL E  Y+  E     E
Sbjct: 99  DQLPADQQPLTIINCE----IAGFSNHYWELRRCRPKLKKLKKLLMENTYNGPE----NE 158

Query: 156 MDKHENGIYNWDDLRDKVQASDDELKAGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNR 215
            +  +N ++  +DL + +QAS++EL   L+ + A  I+G WRL+D  Y   +L  +    
Sbjct: 159 RESQDNSLHTTEDLLNMIQASNEELVDHLKAIHACSINGFWRLLDFDYEMKLLNHITQLI 218

Query: 216 ILNDWSLDALDECVIVKVMELDGF-PEKLVHHCLQVYGDKL--DGNEGTICLWRLDEKRV 275
               WS   +   + V + EL    PE+++ HCL  YG +L  +G  G    + LDE ++
Sbjct: 219 DSESWSFSKVP--LPVCLQELRSLEPEEMIEHCLTCYGKRLIDEGTGGD--FFALDEDKI 278

Query: 276 CVHFAREVLKKG-KMKLEHFMDEWIRKIPLGMCANFDMLDGEVLTERLGVETWVRGFRAS 335
           C   A  +L+   K  L  F + W + +P GM    D L G  L +R      +   +  
Sbjct: 279 CRATALMLLQNAVKFNLAEFQEVWQQSVPEGMNTRLDQLKGLALVDRTSRPETIFLLKTE 338

Query: 336 SFPSNPAERFNILFRERPKWEWKDLHPFIRDLTVPGLSSEGLLLKYTRRTQSN 384
             P +  ERFN LF  R KW   D+ P+I+DL     +   LL KY R +  N
Sbjct: 339 DLPEDTQERFNTLFGMREKWAEADIAPYIKDLCGEKQTIGALLTKYARSSMQN 379

[Close]

BLAST of Sed0012756 vs. ExPASy Swiss-Prot
Match: Q6GMB0 (Sister chromatid cohesion protein DCC1 OS=Xenopus laevis OX=8355 GN=dscc1 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.6e-36
Identity = 107/351 (30.48%), Postives = 165/351 (47.01%), Query Frame = 0


Query: 36  DLVLLEVDEKLLEEV-LHQRVSIRGQSEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRS 95
           D  L+E+D+ L +++     + IRG   + AV C++ KTY +K   TSN +L IP     
Sbjct: 39  DYSLMELDDTLCKQIEAGDSLVIRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIPGCK-- 98

Query: 96  EYYENEIDSLENDGSKEVAPVIKVAPGFMELVEISPRIDKLKLLLSEKPYSLSEEWESEE 155
               +++ + +   S     +   +  + EL    P++ KLK LL E  Y+     E+E 
Sbjct: 99  --LPDQLPADQQPLSVIHCEIAGFSNHYWELRRCRPKLKKLKKLLMENTYNGP---ENES 158

Query: 156 MDKHENGIYNWDDLRDKVQASDDELKAGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNR 215
               E  +Y  +DL   +Q+S +EL   L+ + A  I G WRL+D  Y   +L  +    
Sbjct: 159 ESSQETSLYTTEDLLSVIQSSTEELMDHLKAIHACNIKGIWRLLDFDYEMKLLNHITQLI 218

Query: 216 ILNDWSLDALDECVIVKVMELDGF-PEKLVHHCLQVYGDKLDGNEGTICLWRLDEKRVCV 275
               WS   +   + V + EL    PE+++ HCL  YG +L   EG  C + LDE ++C 
Sbjct: 219 DSESWSFSKVP--LQVCLQELRSLEPEEMIEHCLTCYGKRL-MEEGGDC-FALDEDKICR 278

Query: 276 HFAREVLKKG-KMKLEHFMDEWIRKIPLGMCANFDMLDGEVLTERLGVETWVRGFRASSF 335
             A  +L+   K  L  F + W + +P GM    D L G  L +R      +   +    
Sbjct: 279 ATALMLLQNAVKFNLAEFQEVWQQSVPDGMNTRLDQLKGLALVDRTSRPETIFLLQTEDL 338

Query: 336 PSNPAERFNILFRERPKWEWKDLHPFIRDLTVPGLSSEGLLLKYTRRTQSN 384
           P +  ERFN LF  R KW   D+ P+I+DL     +   LL KY R +  N
Sbjct: 339 PEDTQERFNTLFGMREKWTEADIAPYIQDLCGEKQTIGALLTKYARSSMQN 378

[Close]

BLAST of Sed0012756 vs. ExPASy TrEMBL
Match: A0A5D3CZT5 (Sister chromatid cohesion protein DCC1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003360 PE=3 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 6.3e-195
Identity = 332/393 (84.48%), Postives = 360/393 (91.60%), Query Frame = 0


Query: 1   MEQKYPHGRGADAVLHLQPNSSISIAYHPLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+ PHGRGADAVL+LQPNSSISIAYH LFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  SEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRSEYYENEIDSLENDGSKEVAPVIKVAP 120
            EE+AVFCTKSKTYGIKYVGTSNSVLLIPP  RSEYY+NE+DS + D SKEVAPVIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYKNELDSHQTDNSKEVAPVIKVAP 120

Query: 121 GFMELVEISPRIDKLKLLLSEKPYSLSEEWESEEMDKHENGIYNWDDLRDKVQASDDELK 180
           G MEL EI+PRIDKLKLLLSE+PYS ++EWE+E  DK+E  +Y+WDDL +KVQASDDELK
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEPYSFADEWENEAADKYEKRMYSWDDLINKVQASDDELK 180

Query: 181 AGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNRILNDWSLDALDECVIVKVMELDGFPE 240
           AGLQ LSAVEIDG+WR+VDEKYMDS+LQMLL+NRILNDWSLDALDE VI+KVM++DGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEDVIMKVMKMDGFPE 240

Query: 241 KLVHHCLQVYGDKLDGNEGTICLWRLDEKRVCVHFAREVLKKGKMKLEHFMDEWIRKIPL 300
           KLV HCL VYGDKLDGNEG  CLWRLDEKRVCVHFAREVL+KGKMKLEH MDEW +KIPL
Sbjct: 241 KLVQHCLHVYGDKLDGNEGKSCLWRLDEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 301 GMCANFDMLDGEVLTERLGVETWVRGFRASSFPSNPAERFNILFRERPKWEWKDLHPFIR 360
           GMCANFDML+GEVLTERLGVETWVRGFR    PSNPAERF ILF+ERPKWEWKDL P+IR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQSNPKDEPVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQ NP+ E VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

[Close]

BLAST of Sed0012756 vs. ExPASy TrEMBL
Match: A0A6J1IFE0 (sister chromatid cohesion protein DCC1 OS=Cucurbita maxima OX=3661 GN=LOC111473829 PE=3 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 6.3e-195
Identity = 331/393 (84.22%), Postives = 362/393 (92.11%), Query Frame = 0


Query: 1   MEQKYPHGRGADAVLHLQPNSSISIAYHPLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+ PHGRGADAVL+LQPNSS++IAYH LFGPHDDLVLLEVDEKLLEEVLH+RVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSVAIAYHSLFGPHDDLVLLEVDEKLLEEVLHERVSIRGQ 60

Query: 61  SEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRSEYYENEIDSLENDGSKEVAPVIKVAP 120
           +EEEAVFCTKSKTYGIKYVGTSNSVLLIPP  RSEYYENE+DS  ND +KEV PVIK+AP
Sbjct: 61  AEEEAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYENELDSQGNDSTKEVVPVIKLAP 120

Query: 121 GFMELVEISPRIDKLKLLLSEKPYSLSEEWESEEMDKHENGIYNWDDLRDKVQASDDELK 180
           G MELVEI+PRIDKLKLLLSE PYSL++EWESEEMDK E  +YNW+DL DKVQASDDELK
Sbjct: 121 GIMELVEIAPRIDKLKLLLSENPYSLADEWESEEMDKCEKQMYNWNDLLDKVQASDDELK 180

Query: 181 AGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNRILNDWSLDALDECVIVKVMELDGFPE 240
           AGL+ LSAVEIDG+WRLVDEKYMDS+LQMLLNNRILNDWSLDALDE V++KVM++DGF E
Sbjct: 181 AGLRALSAVEIDGYWRLVDEKYMDSMLQMLLNNRILNDWSLDALDEGVLMKVMKMDGFSE 240

Query: 241 KLVHHCLQVYGDKLDGNEGTICLWRLDEKRVCVHFAREVLKKGKMKLEHFMDEWIRKIPL 300
            LVHHCL VYGDKL+G+EG  CLWRLDEKRVCVHFAREVL+KGKMK+EHFMDEW +KIP+
Sbjct: 241 TLVHHCLDVYGDKLEGDEGNSCLWRLDEKRVCVHFAREVLRKGKMKVEHFMDEWQKKIPV 300

Query: 301 GMCANFDMLDGEVLTERLGVETWVRGFRASSFPSNPAERFNILFRERPKWEWKDLHPFIR 360
            M ANFDML+GEVLTERLGVETWVRGFR SS P NP ERF+ILFRERPKWEWKDL P+IR
Sbjct: 301 EMHANFDMLEGEVLTERLGVETWVRGFRVSSLPLNPVERFSILFRERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQSNPKDEPVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQ NP+ EPVFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEPVFSAR 393

[Close]

BLAST of Sed0012756 vs. ExPASy TrEMBL
Match: A0A1S3AWK7 (sister chromatid cohesion protein DCC1 OS=Cucumis melo OX=3656 GN=LOC103483416 PE=3 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 6.3e-195
Identity = 332/393 (84.48%), Postives = 360/393 (91.60%), Query Frame = 0


Query: 1   MEQKYPHGRGADAVLHLQPNSSISIAYHPLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+ PHGRGADAVL+LQPNSSISIAYH LFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  SEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRSEYYENEIDSLENDGSKEVAPVIKVAP 120
            EE+AVFCTKSKTYGIKYVGTSNSVLLIPP  RSEYY+NE+DS + D SKEVAPVIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYKNELDSHQTDNSKEVAPVIKVAP 120

Query: 121 GFMELVEISPRIDKLKLLLSEKPYSLSEEWESEEMDKHENGIYNWDDLRDKVQASDDELK 180
           G MEL EI+PRIDKLKLLLSE+PYS ++EWE+E  DK+E  +Y+WDDL +KVQASDDELK
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEPYSFADEWENEAADKYEKRMYSWDDLINKVQASDDELK 180

Query: 181 AGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNRILNDWSLDALDECVIVKVMELDGFPE 240
           AGLQ LSAVEIDG+WR+VDEKYMDS+LQMLL+NRILNDWSLDALDE VI+KVM++DGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEDVIMKVMKMDGFPE 240

Query: 241 KLVHHCLQVYGDKLDGNEGTICLWRLDEKRVCVHFAREVLKKGKMKLEHFMDEWIRKIPL 300
           KLV HCL VYGDKLDGNEG  CLWRLDEKRVCVHFAREVL+KGKMKLEH MDEW +KIPL
Sbjct: 241 KLVQHCLHVYGDKLDGNEGKSCLWRLDEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 301 GMCANFDMLDGEVLTERLGVETWVRGFRASSFPSNPAERFNILFRERPKWEWKDLHPFIR 360
           GMCANFDML+GEVLTERLGVETWVRGFR    PSNPAERF ILF+ERPKWEWKDL P+IR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQSNPKDEPVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQ NP+ E VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

[Close]

BLAST of Sed0012756 vs. ExPASy TrEMBL
Match: A0A6J1FGL7 (sister chromatid cohesion protein DCC1 OS=Cucurbita moschata OX=3662 GN=LOC111444006 PE=3 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 1.8e-194
Identity = 329/393 (83.72%), Postives = 362/393 (92.11%), Query Frame = 0


Query: 1   MEQKYPHGRGADAVLHLQPNSSISIAYHPLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQ+ PHGRGADAVLHLQPNSS++IAYH LFGPHDDLVLLEVDEKLLEEVLH+RVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLHLQPNSSVAIAYHSLFGPHDDLVLLEVDEKLLEEVLHERVSIRGQ 60

Query: 61  SEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRSEYYENEIDSLENDGSKEVAPVIKVAP 120
           +EEEAVFCTKSKTYGIKYVGTSNSVLLIPP  RSEYYENE+DS  ND +KEV PVIK+AP
Sbjct: 61  AEEEAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYENELDSHGNDSTKEVVPVIKLAP 120

Query: 121 GFMELVEISPRIDKLKLLLSEKPYSLSEEWESEEMDKHENGIYNWDDLRDKVQASDDELK 180
           G MELVEI+PRIDKLKLLLSE PYSL++EWESEEMDK E  +Y+W+DL DKVQASDDELK
Sbjct: 121 GIMELVEIAPRIDKLKLLLSENPYSLADEWESEEMDKCEKQMYSWNDLLDKVQASDDELK 180

Query: 181 AGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNRILNDWSLDALDECVIVKVMELDGFPE 240
           AGLQ LSAVEIDG+WRLVDE+YMDS+LQMLLNNRILNDWSLDALDE V++KVM++DGF E
Sbjct: 181 AGLQALSAVEIDGYWRLVDEQYMDSMLQMLLNNRILNDWSLDALDEVVLMKVMKMDGFSE 240

Query: 241 KLVHHCLQVYGDKLDGNEGTICLWRLDEKRVCVHFAREVLKKGKMKLEHFMDEWIRKIPL 300
            LVHHCL VYGDKL+G+EG  CLWRLDEKRVCVHFAREVL+KGKMK+EHFMDEW +KIP+
Sbjct: 241 TLVHHCLDVYGDKLEGDEGNSCLWRLDEKRVCVHFAREVLRKGKMKVEHFMDEWQKKIPV 300

Query: 301 GMCANFDMLDGEVLTERLGVETWVRGFRASSFPSNPAERFNILFRERPKWEWKDLHPFIR 360
            M ANF+ML+GEVLTERLGVETWVRGFR SS P NP ERF+ILFRERPKWEWKDL P+IR
Sbjct: 301 EMHANFEMLEGEVLTERLGVETWVRGFRVSSLPLNPVERFSILFRERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQSNPKDEPVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQ NP+ EP+FSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEPMFSAR 393

[Close]

BLAST of Sed0012756 vs. ExPASy TrEMBL
Match: A0A0A0L4H9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127250 PE=3 SV=1)

HSP 1 Score: 677.9 bits (1748), Expect = 2.5e-191
Identity = 327/393 (83.21%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1   MEQKYPHGRGADAVLHLQPNSSISIAYHPLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60
           MEQK PHG+GADAVL+LQPNSSISIAYH LFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  SEEEAVFCTKSKTYGIKYVGTSNSVLLIPPLSRSEYYENEIDSLENDGSKEVAPVIKVAP 120
            EE+AVFCTKSKTYGIKYVGTSNSVLLIPP  RSEYY NE+DS + D SKEVAPVIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120

Query: 121 GFMELVEISPRIDKLKLLLSEKPYSLSEEWESEEMDKHENGIYNWDDLRDKVQASDDELK 180
           G MEL EI+PRIDKLKLLLSE+ YS ++EWE+E +DK+E  +YNWDDL +KVQASD+ELK
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180

Query: 181 AGLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNRILNDWSLDALDECVIVKVMELDGFPE 240
           AGLQ LSAVEIDG+WR+VDEKYMDS+LQMLL+NRILNDWSLDALDE VI+ VM++DGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240

Query: 241 KLVHHCLQVYGDKLDGNEGTICLWRLDEKRVCVHFAREVLKKGKMKLEHFMDEWIRKIPL 300
           KLV HCL VYGDKLD +EG  CLWRL+EKRVCVHFAREVL+KGKMKLEH MDEW +KIPL
Sbjct: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 301 GMCANFDMLDGEVLTERLGVETWVRGFRASSFPSNPAERFNILFRERPKWEWKDLHPFIR 360
           GMCANFDML+GEVLTERLGVETWVRGFR    PSNPAERF ILF+ERPKWEWKDL P+IR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 361 DLTVPGLSSEGLLLKYTRRTQSNPKDEPVFSAR 394
           DLTVPGLSSEGLLLKYTRRTQ NP+ E VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

[Close]

BLAST of Sed0012756 vs. TAIR 10
Match: AT2G44580.1 (zinc ion binding )

HSP 1 Score: 413.3 bits (1061), Expect = 2.2e-115
Identity = 204/392 (52.04%), Postives = 279/392 (71.17%), Query Frame = 0


Query: 10  GADAVLHLQPNSSISIAYHPLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQSEEEAVFCT 69
           GA+AV++L+   S+ I+YHP FGPH+DL+LLE D+KL+ ++ HQRV++RG  +E+AV CT
Sbjct: 6   GAEAVINLKSGYSLPISYHPCFGPHEDLLLLEADDKLVSDIFHQRVTLRGLPDEDAVLCT 65

Query: 70  KSKTYGIKYVGTSNSVLLIPPLSRSEYYENEIDSLENDGSKEVAPVIKVAPGFMELVEIS 129
           KSKTY IK+VG SNS+ LIPP      +    D+  +D +  V+ V+K+APG MELVE S
Sbjct: 66  KSKTYAIKFVGNSNSMFLIPP----SIFPG--DAQVSDTNNNVS-VLKIAPGNMELVEAS 125

Query: 130 PRIDKLKLLLSEKPYSLSE-----EWESEEMD---KHENGIYNWDDLRDKVQASDDELKA 189
           PR+DKLK +L   P+   E     + +++++D   K +  +Y W DL + VQASD+EL+ 
Sbjct: 126 PRLDKLKQILLANPFGAGEVEAMMDVDNDDLDHSGKKDLALYTWSDLVNTVQASDEELRN 185

Query: 190 GLQVLSAVEIDGHWRLVDEKYMDSILQMLLNNRILNDWSLDALDECVIVKVMELDGFPEK 249
           GLQ LSA+EIDG WR++DE Y+D IL+MLL+N +L DWS D LDE  +V  +  D FP +
Sbjct: 186 GLQSLSAIEIDGFWRVIDENYLDVILRMLLHNCVLKDWSFDDLDEDEVVNALVADEFPSQ 245

Query: 250 LVHHCLQVYGDKLDGNEGTICLWRLDEKRVCVHFAREVLKKGKMKLEHFMDEWIRKIPLG 309
           L  HCL+V+G K++  +     W+L+ + VC+HFAR++L++ KM+LE FM+EW +KIP G
Sbjct: 246 LASHCLRVFGSKVNETD----KWKLEPRLVCLHFARQILREEKMRLESFMEEWKKKIPDG 305

Query: 310 MCANFDMLDGEVLTERLGVETWVRGFRASSFPSNPAERFNILFRERPKWEWKDLHPFIRD 369
           M   F+ML+GEVLTE++G+ET V  F   S PS P ERF++LF+ R KWEWKDL P++RD
Sbjct: 306 MEERFEMLEGEVLTEKIGIETRVYTFSVRSLPSTPEERFSVLFKHRSKWEWKDLEPYLRD 365

Query: 370 LTVPGLSSEGLLLKYTRRTQSNPKDEPVFSAR 394
           L VP LS EGLLLKYTRR Q      PVFSAR
Sbjct: 366 LHVPRLSMEGLLLKYTRRAQPKADAPPVFSAR 386

The following BLAST results are available for this feature:

BLAST of Sed0012756 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879383.1	1.3e-194	84.99	sister chromatid cohesion protein DCC1 [Benincasa hispida] >XP_038879394.1 siste...	[more]
XP_008438251.1	1.3e-194	84.48	PREDICTED: sister chromatid cohesion protein DCC1 [Cucumis melo] >KAA0049092.1 s...	[more]
XP_022974980.1	1.3e-194	84.22	sister chromatid cohesion protein DCC1 [Cucurbita maxima]	[more]
KAG7028709.1	1.7e-194	84.22	Sister chromatid cohesion protein DCC1 [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_022937673.1	3.8e-194	83.72	sister chromatid cohesion protein DCC1 [Cucurbita moschata]	[more]

BLAST of Sed0012756 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q14AI0	2.9e-40	30.48	Sister chromatid cohesion protein DCC1 OS=Mus musculus OX=10090 GN=DSCC1 PE=2 SV...	[more]
Q9BVC3	5.0e-40	32.29	Sister chromatid cohesion protein DCC1 OS=Homo sapiens OX=9606 GN=DSCC1 PE=1 SV=...	[more]
Q66I84	5.5e-39	30.97	Sister chromatid cohesion protein DCC1 OS=Danio rerio OX=7955 GN=dscc1 PE=2 SV=1	[more]
Q6GL75	2.3e-37	30.03	Sister chromatid cohesion protein DCC1 OS=Xenopus tropicalis OX=8364 GN=dscc1 PE...	[more]
Q6GMB0	2.6e-36	30.48	Sister chromatid cohesion protein DCC1 OS=Xenopus laevis OX=8355 GN=dscc1 PE=2 S...	[more]

BLAST of Sed0012756 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZT5	6.3e-195	84.48	Sister chromatid cohesion protein DCC1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1IFE0	6.3e-195	84.22	sister chromatid cohesion protein DCC1 OS=Cucurbita maxima OX=3661 GN=LOC1114738...	[more]
A0A1S3AWK7	6.3e-195	84.48	sister chromatid cohesion protein DCC1 OS=Cucumis melo OX=3656 GN=LOC103483416 P...	[more]
A0A6J1FGL7	1.8e-194	83.72	sister chromatid cohesion protein DCC1 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A0A0L4H9	2.5e-191	83.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127250 PE=3 SV=1	[more]

BLAST of Sed0012756 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44580.1	2.2e-115	52.04	zinc ion binding	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019128	Sister chromatid cohesion protein Dcc1	PFAM	PF09724	Dcc1	coord: 38..359 e-value: 5.0E-87 score: 292.3
IPR019128	Sister chromatid cohesion protein Dcc1	PANTHER	PTHR13395	SISTER CHROMATID COHESION PROTEIN DCC1-RELATED	coord: 10..393

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012756.1	Sed0012756.1	mRNA
Sed0012756.2	Sed0012756.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
biological_process	GO:0034088	maintenance of mitotic sister chromatid cohesion
biological_process	GO:0007064	mitotic sister chromatid cohesion
cellular_component	GO:0000785	chromatin
cellular_component	GO:0000775	chromosome, centromeric region
cellular_component	GO:0031390	Ctf18 RFC-like complex
cellular_component	GO:0005634	nucleus