Sed0012648 (gene) Chayote v1

Overview
NameSed0012648
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPeroxiredoxins prx-1 prx-2 prx-3
LocationLG10: 30001346 .. 30006014 (+)
RNA-Seq ExpressionSed0012648
SyntenySed0012648
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGTTCCTAATTGCATATTATGTCTTTATTTCATCATATTTTATCATAAATTTATTAGATAATATAGAGTTCCACATTAAAACTAATCGACAATGAGAGAATCTCTTATATATTGTTATGAGATCTCTACTTTTTCCGATGTGAGATCCTAAACTGAGAAGATCATCTTAATTATATTGTTGATATAAGAGATAGAGTGGGTGTTTTTGTTTGGTTGCTTTCAATAAGGACGATTTAAAAAGGAATATTCCATTACACACTAGAGAAACAATCTCTTGAGACATTGATCATATATTTATATTGTGATCAACAAGTCTTTTGCTCTGTTAAGTTCTTGAGTTTCCATATTTCTTGAAGTCTGCAGACATGGCCTCCAATGGTAGCCTTGGTGTTGCGGTTTCGACATCTCCTGAACACGGCAGTAGAGATGCTGAGACAGTGAGGTCCAGTTCGCCGAAAGGCCAGTGTTTGTGCTCACCCACGATGCATCAAGGCTCGTTTAGGTGTCGGCTTCATCGATCGACATCATCAGCATGGATGAAACGATCGAAATCAATGCCTGCCAACAACCCTGTGGCTTCTCTTTCTCCCAAAGAATCTCTTGGACATGCATGAAGCAAAATTCATGTAACTCTCCTTAAACTTATGTCCTAATTCTCTAAAATTGTGGAGAAAAATAAAAGCTTTTGATTTATTTCTCTTTATGTGCAATAGAATATATATAAATAATATGTTTGCGTGTTCGTAAGTTTATGTGTGTGAAAAGTAAGTTTGCTCGGTAATTCTTCGACTTTGTTGTAGAGTTAGACTAATCTTCTTACCTTCTGTATTTCTGTTAAATTTTTTTTTTTTATTCAACCATATTTGAGCTAATTTAAACGAGTCGATTGCTATGTTATACATCATGTCATTAAAATTATGCTTTCCTTGACATCATTGTATGATGTTAGGTTAACTTGATCTAGATCATTAAGTGGATCCATTTTGTTTAACTTCTTAAATATGAAATGAACCGAGTGGTTTAATTGGTCAAGAAAGTCTTTAAGTAATCGGTTAAAATACTATTTTGGTCCCTAGACTATGGAGTTGTTCCATTTTAATCTCTAGACTTTCAAAGTGTCCAATTTTAGTCCCTTAACTTTGAAAATTGTCCAAGTTTAGTCCCTAGACTTTCAAATGTTCAAATTTAGTCTTCTCAACTATCAATTAAGTTTAAAAATAATCTTTATCGAATTAACCCACTTTTAAAATAAGAATAAGATAATATATATTTTCTCTCTCCTCCATTTTTTTCTCATCTTTATCTCTCTCTTTAAACTTTCTCTCTCTTTATCTCTCTCTCTTTAAACTTTCTCCCTCTTTAAACTTTCTCATCTTTATCTCTCTCTTTAAACTTTTTCCCTCCATTTTTTTTCCATAATTTTAAATTCAAACGGATGAAATGGGTGGGGATGAAATGAAGCAGGTGCCCCCTTTCATTTCATTTTCCTCATCTTTTTTGCAAAAATTCTTCACTCTCTGTTTTTCATTGGCCATTTAACTTCCAACAAACAAGAGGGAGAAAGTTTAAAGAGAGTGATAAAAGATGAAAAAAAAAAAGGAGGAGAGAGAAAATATATATTATTTTATTCTAATTTTAAAAGTGGGTTAATTCACCAAAGACTATTTTTAAACTTAATTGATAATTGAAGAGCTAAATTTGAACATTTAAAAGTCTAGGAATTAAATTTGGACAATTATCAGAGTTAAGGGACTAAAATTGGACACTTTGAAAGTTTAGGGATTAAAATGGATCAACCCTCATAGTGTAGGGACTAAAATGGTATTTTAACCTACATAATTTAAAGGGATTAATTCAATTATGGTGGTCATTTACCTAAAAATTATTTTGGATTTCTATAAATTTAGAATCTAGATTCCTTGAAAAAAAAGAAAGTTCATTTGTGCAGAGTTCTTGGTTCACGAAGACTTTCAGCCAAACATTGTTTGCATAAACTCATTAATTTATACTCTCTGTACAAACTTTGACCTTTTAATATTTCACAAATTTAGTAAGATATCTTTTTATGGATATAAGGAAGTGGTTGAAATTAGGTGTGGATGATGTTGAGATATACCTTGAACGATTCAATGTCCTACCTTAAACCTAAACGAAATCTGTATTTCTGTTTAATAGGCTTTGATGTATTTGAGTTTTATTTATAATAGAGTTTAATGAGAGTCTGTACTTATATAAATTCTAATTAAACCCTAATCTCCTATAATGTTAATTCTGTTTTTTTCCTCTCCTTAGAAAAATTGTGTTTCCTCTTTGTCATGTCGATAAGCTAACACGACAATAGTGGATCATATAAATTTTTATATTATCTTTTTTACATTTTTCTTACTATTTTCCATTGGTCAGTTGATTGCAGATTCATAACAAATGGTATATGAATGCATTGAGATGAAAAGAAAAGCAAATAGGTTATCTCTCCTCTGTTTCTTGTCAACATCATTATCTCCAACAATGGCACTCTTTTGGTCAAACCCAAAATTTGTGTCTTATCATCTCCCCCATATTTTTGGCTTCCTAATTTTATTATCTTTTTATTTTGATTTTCTTTTCTTTTCTATTTAAACAATGAAATCATTGTGTCATTGATCCATTTGATGTCAATGGATATTCATCTCATAAATTATATCATTATTTGGATTAATGATGTTTAAAGATATCAATTCCCATTCTAAGGATTAATGGCTTGATCCACTATTCTCCCAATTGTTTAACTAAAAAAATGATGTTAACATGTTTTGAAATTCAGTGTAAGAGACTAAAATCTAGAGTCCTAATTTAACCTTGAAAGGAATCTTATAACGTACATTATTCTTTTTTCTTTTAATATGTTTTTTTTAAACAAAAAATATCATTTTTATGGATAATGTTTTTTTTTTCTTTATGAAATTGTAGTTATCTACTTAATATTAATACATTCATATATATAATTGTCGACAGATAAAAAAAAGATAATATTGTTTATTCATTGAGTTGTTAGAATCAAAGATTCCTTTATAAGCCACATTTAACTGTGGATTGATGGCCCATTTCTCCATATAATTTAATGTTTAGGATTTGTGAATAAAAAGGTAAAGTTAAATAAACCATGTTTAAAAAAAATAATGTTTAGGATTTGAAATATTTGGACATTTCTATTTCTTTTGGGCATTCGAAGAAATTATCCTTTAAATTTATAAAGGAGAAATTGTGGGAAATGCTTTTCAAAATTGTGCGAAGTGCTCTTCAAGTGAAAACTTAAATTTCTTTGTTGGTAGTAAAGAAGTTTTGATAAAGGAAGTTTTGCAGGCTATCCCAATCTACTCAATGTCATGTTTTCAACTTCCAAAGTCCCTAGATATTATGATTGTCAGCGCATTATTTCAAAGTTTTGGTGGGGTGATAACGATTTGCGTATTCATATTCATTGGGTAATTTGGAAAATGGCGTGTACTCAAAGGTTTAGTGGTGGCCTTGGTTTTCGTGACTTGGAGTTATTCAACCAAGTGTTTTTGACAAAACATGGATGACGTTTATTGACGGAACCTGAGTCTCTTTTGGTAGAGTCCTTCGTTGTAAATATTTTCATTCCACCTCTTTCTTTGATGCTAAGTGACCGGGAAATGGGTGTTATGCATGGAGGAGTATTTTGAGGGGGCATGATCTATTAGCTAAGGGAATTGGATGGGACTTGGAAGTGGTCGGAATATAAATATTCTTTCTAGTAATTGTTACTTTATTTTTTATACTGATTTACCAGAGCATGTAACAGAGGCACATGATCTTCTTCTTTGGTTTTTTTTTATAAACTTAGCATTGAAACTTTATAAGGATTTCTAGTGATGTGCGCTGATGGCTAGTATGAAAGGCAATGAGAGCTTGAAATCAAATTGGGATTTGAGTTTGGAATGAGATTTTGTAGTCAATACCTTTTGGATTTTAGGAAGGCTCATCACAATTTAGTGGTGGAGGTTGAGGCTCGACCGACTAGTACAATTGAAGAAAAATGGAAGTCTCCTTCTCATAGTTTTGTGAAACTTAATACAGATGCGGCAATGTGTTAAGATGATCGAAGAAGTGGTATTGGGGGTGGATAAGCCATATTTTCCTTTTGTAGGCCAGTTGGCTCGGTGATTGATGCCGAAATTGTTGAAGCTCTTGCAATTAGGGAAGATATGCAAATGACAATCCATCTGGGCTTTGCAAAGGTGATTAATTTGCTCAAAAATTGTTTTCTGTGTCGATATGAAGTTGGAAAAATTGCGAAGGAAGTGTGGGTTGTTGGAGATGGGATGAAGTTAGTGTCGTTTAGATGGTGTAGTTGTCGGCGCAATTGTTTGGCTCATGCTCTCGAAAAAAATTGCTAACTCTTGAGAATAGAACATGTAATGAATGGAAGTGGTTACAGCAGAAGTTGAAGTTTTTTATTTGCAAGAGTTGATCAAGGAAGATAGCCCTAGTGTGGGTGAAATTGCTTTAATGGCAGTGTAATTTACATTTTATCTTTTCCATCTCAAAAAATAAATAAATAAATAAAATAAACCATATCCAAACCAGATATGAATAAAACTCAACTTTCTAATCTCTTAAAATAATAACTCATTTAGATAATGTTTTTTGTAGAGAGATTGCAG

mRNA sequence

CTTGTTCCTAATTGCATATTATGTCTTTATTTCATCATATTTTATCATAAATTTATTAGATAATATAGAGTTCCACATTAAAACTAATCGACAATGAGAGAATCTCTTATATATTGTTATGAGATCTCTACTTTTTCCGATGTGAGATCCTAAACTGAGAAGATCATCTTAATTATATTGTTGATATAAGAGATAGAGTGGGTGTTTTTGTTTGGTTGCTTTCAATAAGGACGATTTAAAAAGGAATATTCCATTACACACTAGAGAAACAATCTCTTGAGACATTGATCATATATTTATATTGTGATCAACAAGTCTTTTGCTCTGTTAAGTTCTTGAGTTTCCATATTTCTTGAAGTCTGCAGACATGGCCTCCAATGGTAGCCTTGGTGTTGCGGTTTCGACATCTCCTGAACACGGCAGTAGAGATGCTGAGACAGTGAGGTCCAGTTCGCCGAAAGGCCAGTGTTTGTGCTCACCCACGATGCATCAAGGCTCGTTTAGGTGTCGGCTTCATCGATCGACATCATCAGCATGGATGAAACGATCGAAATCAATGCCTGCCAACAACCCTGTGGCTTCTCTTTCTCCCAAAGAATCTCTTGGACATGCATGAAGCAAAATTCATTTGATTGCAGATTCATAACAAATGGTATATGAATGCATTGAGATGAAAAGAAAAGCAAATAGGTTATCTCTCCTCTGTTTCTTGTCAACATCATTATCTCCAACAATGGCACTCTTTTGGTCAAACCCAAAATTTGTGTCTTATCATCTCCCCCATATTTTTGGCTTCCTAATTTTATTATCTTTTTATTTTGATTTTCTTTTCTTTTCTATTTAAACAATGAAATCATTGTGTCATTGATCCATTTGATGTCAATGGATATTCATCTCATAAATTATATCATTATTTGGATTAATGATGTTTAAAGATATCAATTCCCATTCTAAGGATTAATGGCTTGATCCACTATTCTCCCAATTGTTTAACTAAAAAAATGATGTTAACATGTTTTGAAATTCAGTGTAAGAGACTAAAATCTAGAGTCCTAATTTAACCTTGAAAGGAATCTTATAACGTACATTATTCTTTTTTCTTTTAATATGTTTTTTTTAAACAAAAAATATCATTTTTATGGATAATGTTTTTTTTTTCTTTATGAAATTGTAGTTATCTACTTAATATTAATACATTCATATATATAATTGTCGACAGATAAAAAAAAGATAATATTGTTTATTCATTGAGTTGTTAGAATCAAAGATTCCTTTATAAGCCACATTTAACTGTGGATTGATGGCCCATTTCTCCATATAATTTAATGTTTAGGATTTGTGAATAAAAAGGTAAAGTTAAATAAACCATGTTTAAAAAAAATAATGTTTAGGATTTGAAATATTTGGACATTTCTATTTCTTTTGGGCATTCGAAGAAATTATCCTTTAAATTTATAAAGGAGAAATTGTGGGAAATGCTTTTCAAAATTGTGCGAAGTGCTCTTCAAGTGAAAACTTAAATTTCTTTGTTGGTAGTAAAGAAGTTTTGATAAAGGAAGTTTTGCAGGCTATCCCAATCTACTCAATGTCATGTTTTCAACTTCCAAAGTCCCTAGATATTATGATTGTCAGCGCATTATTTCAAAGTTTTGGTGGGGTGATAACGATTTGCGTATTCATATTCATTGGGTAATTTGGAAAATGGCGTGTACTCAAAGGTTTAGTGGTGGCCTTGGTTTTCGTGACTTGGAGTTATTCAACCAAGTGTTTTTGACAAAACATGGATGACGTTTATTGACGGAACCTGAGTCTCTTTTGGTAGAGTCCTTCGTTGTAAATATTTTCATTCCACCTCTTTCTTTGATGCTAAGTGACCGGGAAATGGGTGTTATGCATGGAGGAGTATTTTGAGGGGGCATGATCTATTAGCTAAGGGAATTGGATGGGACTTGGAAGTGGTCGGAATATAAATATTCTTTCTAGTAATTGTTACTTTATTTTTTATACTGATTTACCAGAGCATGTAACAGAGGCACATGATCTTCTTCTTTGGTTTTTTTTTATAAACTTAGCATTGAAACTTTATAAGGATTTCTAGTGATGTGCGCTGATGGCTAGTATGAAAGGCAATGAGAGCTTGAAATCAAATTGGGATTTGAGTTTGGAATGAGATTTTGTAGTCAATACCTTTTGGATTTTAGGAAGGCTCATCACAATTTAGTGGTGGAGGTTGAGGCTCGACCGACTAGTACAATTGAAGAAAAATGGAAGTCTCCTTCTCATAGTTTTGTGAAACTTAATACAGATGCGGCAATGTGTTAAGATGATCGAAGAAGTGGTATTGGGGGTGGATAAGCCATATTTTCCTTTTGTAGGCCAGTTGGCTCGGTGATTGATGCCGAAATTGTTGAAGCTCTTGCAATTAGGGAAGATATGCAAATGACAATCCATCTGGGCTTTGCAAAGGTGATTAATTTGCTCAAAAATTGTTTTCTGTGTCGATATGAAGTTGGAAAAATTGCGAAGGAAGTGTGGGTTGTTGGAGATGGGATGAAGTTAGTGTCGTTTAGATGGTGTAGTTGTCGGCGCAATTGTTTGGCTCATGCTCTCGAAAAAAATTGCTAACTCTTGAGAATAGAACATGTAATGAATGGAAGTGGTTACAGCAGAAGTTGAAGTTTTTTATTTGCAAGAGTTGATCAAGGAAGATAGCCCTAGTGTGGGTGAAATTGCTTTAATGGCAGTGTAATTTACATTTTATCTTTTCCATCTCAAAAAATAAATAAATAAATAAAATAAACCATATCCAAACCAGATATGAATAAAACTCAACTTTCTAATCTCTTAAAATAATAACTCATTTAGATAATGTTTTTTGTAGAGAGATTGCAG

Coding sequence (CDS)

ATGGCCTCCAATGGTAGCCTTGGTGTTGCGGTTTCGACATCTCCTGAACACGGCAGTAGAGATGCTGAGACAGTGAGGTCCAGTTCGCCGAAAGGCCAGTGTTTGTGCTCACCCACGATGCATCAAGGCTCGTTTAGGTGTCGGCTTCATCGATCGACATCATCAGCATGGATGAAACGATCGAAATCAATGCCTGCCAACAACCCTGTGGCTTCTCTTTCTCCCAAAGAATCTCTTGGACATGCATGA

Protein sequence

MASNGSLGVAVSTSPEHGSRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPVASLSPKESLGHA
Homology
[Close]
BLAST of Sed0012648 vs. NCBI nr
Match: KAA0061558.1 (hypothetical protein E6C27_scaffold41G001200 [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 5.0e-32
Identity = 73/80 (91.25%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1  MASNGSLGVAVSTSPEHGSRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MAS+GSLGV+VSTSP+H +RDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1  MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPVASLSPKESLG 81
          SKSMPANNPVASLSPK SLG
Sbjct: 61 SKSMPANNPVASLSPKGSLG 80

[Close]
BLAST of Sed0012648 vs. NCBI nr
Match: TYK10714.1 (hypothetical protein E5676_scaffold332G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 146.0 bits (367), Expect = 1.5e-31
Identity = 72/80 (90.00%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1  MASNGSLGVAVSTSPEHGSRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MAS+GSLGV+VS+SP+H +RDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1  MASDGSLGVSVSSSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPVASLSPKESLG 81
          SKSMPANNPVASLSPK SLG
Sbjct: 61 SKSMPANNPVASLSPKGSLG 80

[Close]
BLAST of Sed0012648 vs. NCBI nr
Match: KGN60621.1 (hypothetical protein Csa_019426 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 5.5e-31
Identity = 71/79 (89.87%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 1  MASNGSLGVAVSTSPEHGSRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MAS+GSL V+VSTSP+H +RDAETVRS+SPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1  MASDGSLSVSVSTSPKHANRDAETVRSNSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPVASLSPKESL 80
          SKSMP NNPVASLSPKESL
Sbjct: 61 SKSMPTNNPVASLSPKESL 79

[Close]
BLAST of Sed0012648 vs. NCBI nr
Match: KAG7030425.1 (hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.1 bits (362), Expect = 5.5e-31
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 1   MASNGSLGVAVSTSPEHGSRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
           MAS+GSL V VSTSP+HG+RDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 55  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 114

Query: 61  SKSMPANNPVASLSPKESLG 81
           SKSMPA++PVASLS KESLG
Sbjct: 115 SKSMPADHPVASLSSKESLG 134

[Close]
BLAST of Sed0012648 vs. NCBI nr
Match: KAG6586427.1 (hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 143.7 bits (361), Expect = 7.2e-31
Identity = 71/80 (88.75%), Postives = 75/80 (93.75%), Query Frame = 0 

Query: 1   MASNGSLGVAVSTSPEHGSRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
           MASNGSL V VS SP+H +RDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 60  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 119

Query: 61  SKSMPANNPVASLSPKESLG 81
           SKSMPAN PVASLSPKE+LG
Sbjct: 120 SKSMPANKPVASLSPKETLG 139

[Close]
BLAST of Sed0012648 vs. ExPASy TrEMBL
Match: A0A5A7V1X5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001200 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32
Identity = 73/80 (91.25%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1  MASNGSLGVAVSTSPEHGSRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MAS+GSLGV+VSTSP+H +RDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1  MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPVASLSPKESLG 81
          SKSMPANNPVASLSPK SLG
Sbjct: 61 SKSMPANNPVASLSPKGSLG 80

[Close]
BLAST of Sed0012648 vs. ExPASy TrEMBL
Match: A0A5D3CHP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00230 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 7.0e-32
Identity = 72/80 (90.00%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1  MASNGSLGVAVSTSPEHGSRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MAS+GSLGV+VS+SP+H +RDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1  MASDGSLGVSVSSSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPVASLSPKESLG 81
          SKSMPANNPVASLSPK SLG
Sbjct: 61 SKSMPANNPVASLSPKGSLG 80

[Close]
BLAST of Sed0012648 vs. ExPASy TrEMBL
Match: A0A0A0LKU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31
Identity = 71/79 (89.87%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 1  MASNGSLGVAVSTSPEHGSRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MAS+GSL V+VSTSP+H +RDAETVRS+SPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1  MASDGSLSVSVSTSPKHANRDAETVRSNSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 61 SKSMPANNPVASLSPKESL 80
          SKSMP NNPVASLSPKESL
Sbjct: 61 SKSMPTNNPVASLSPKESL 79

[Close]
BLAST of Sed0012648 vs. ExPASy TrEMBL
Match: A0A6J1G498 (uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC111450652 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30
Identity = 71/80 (88.75%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 1   MASNGSLGVAVSTSPEHGSRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
           MAS+GSL V VSTSP+HG+RDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKR
Sbjct: 43  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKR 102

Query: 61  SKSMPANNPVASLSPKESLG 81
           SKSMPA++PVASLS KESLG
Sbjct: 103 SKSMPADHPVASLSSKESLG 122

[Close]
BLAST of Sed0012648 vs. ExPASy TrEMBL
Match: A0A6A1UK22 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G006893 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.7e-17
Identity = 54/76 (71.05%), Postives = 63/76 (82.89%), Query Frame = 0 

Query: 1  MASNGSLGVAVSTSPEHGSRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60
          MAS GS  ++VST+P+ G  +A T  S SPKGQCLCSPT H+GSFRCRLHRS SSAWMKR
Sbjct: 1  MASRGS-QLSVSTTPKSGKGEAVTGASDSPKGQCLCSPTTHKGSFRCRLHRS-SSAWMKR 60

Query: 61 SKSMPANNPVASLSPK 77
          SKSMPA++ VA+LSPK
Sbjct: 61 SKSMPASSSVAALSPK 74

[Close]
BLAST of Sed0012648 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related )

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 0 

Query: 26 RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN 68
          +SSS +  CLC+PT H GSFRCR HR  +   M R  S+P+N
Sbjct: 57 KSSSVRQNCLCAPTTHPGSFRCRYHRRNAGLGMSRGTSVPSN 98

[Close]
BLAST of Sed0012648 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 1.5e-05
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 12 STSPEHGSRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA 67
          +++ E GSR     ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 23 NSAVEVGSRGLSR-QTSMTKTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

[Close]
BLAST of Sed0012648 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). )

HSP 1 Score: 46.2 bits (108), Expect = 1.5e-05
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 12 STSPEHGSRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA 67
          +++ E GSR     ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 23 NSAVEVGSRGLSR-QTSMTKTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

[Close]
BLAST of Sed0012648 vs. TAIR 10
Match: AT1G24577.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67910.2); Has 115 Blast hits to 115 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 2.1e-04
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 0 

Query: 26 RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN 68
          ++S  K  C+CSPT H GSF+C+LHR+ S   ++R+KS+  N
Sbjct: 24 QTSITKTICICSPTTHPGSFKCKLHRTPS---LQRNKSVETN 62

[Close]
BLAST of Sed0012648 vs. TAIR 10
Match: AT3G56500.1 (serine-rich protein-related )

HSP 1 Score: 42.0 bits (97), Expect = 2.8e-04
Identity = 18/42 (42.86%), Postives = 28/42 (66.67%), Query Frame = 0 

Query: 31  KGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANNPVAS 73
           K  C+C+PT H+GSFRCRLHRS++++    +  +    P+ S
Sbjct: 62  KTVCICAPTKHEGSFRCRLHRSSATSHGAATAELHLPKPLLS 103

The following BLAST results are available for this feature:
BLAST of Sed0012648 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0061558.15.0e-3291.25hypothetical protein E6C27_scaffold41G001200 [Cucumis melo var. makuwa][more]
TYK10714.11.5e-3190.00hypothetical protein E5676_scaffold332G00230 [Cucumis melo var. makuwa][more]
KGN60621.15.5e-3189.87hypothetical protein Csa_019426 [Cucumis sativus][more]
KAG7030425.15.5e-3190.00hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6586427.17.2e-3188.75hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Sed0012648 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0012648 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V1X52.4e-3291.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CHP37.0e-3290.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LKU32.7e-3189.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1[more]
A0A6J1G4981.3e-3088.75uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC1114506... [more]
A0A6A1UK221.7e-1771.05Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G006893 PE=4 SV=1[more]
BLAST of Sed0012648 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13227.11.3e-0652.38serine-rich protein-related [more]
AT1G67910.11.5e-0549.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G67910.21.5e-0549.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G24577.12.1e-0447.62unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G56500.12.8e-0442.86serine-rich protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..82
NoneNo IPR availablePANTHERPTHR33132:SF37SERINE-RICH PROTEIN-LIKE PROTEINcoord: 1..76
NoneNo IPR availablePANTHERPTHR33132OSJNBB0118P14.9 PROTEINcoord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0012648.1Sed0012648.1mRNA
Sed0012648.2Sed0012648.2mRNA