Sed0012625 (gene) Chayote v1

Overview


Name	Sed0012625
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Integrase catalytic domain-containing protein
Location	LG11: 14209176 .. 14210726 (+)
RNA-Seq Expression	Sed0012625
Synteny	Sed0012625

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGTATCCTCAGTGGAGAAATGCAATGCAAAATGAATATGATACTCTTCTCGAACAAGAAACTTGGACCTTAGTTCCTTTACCTCTCAACAAACAAGTCATTGGATATAAAAGATATATAGACTTAAGATGAATCCTGATGGAAGCATTGCTCGACACAATGCACGTTTAGTTGCGAAAGGGTATCATCAAGAGGAAGGTATTGATTATAAGGAAACCTTCAGCCCTGTTATAAAGAAACCAACTGTTAGAGTTATAATTTCCTTAGTTGTTTCTTTTGGTTGGTCATTAAGGCAACTTGATGTGAAGAATTGTTACGGCCCAGGTTTTCATCCCGGTTTTCCAGGTATGTTCTAGGGGTATTTCGGTAATTTGGTTGGGCCATTGAGGCTGTTTGAGTCCTTTGCTGAGGTTGGGGATTTACTGTATGTGCAGGTTCTATGCCCCGGGAGTGTTTGGAGAGGTTTGTGGCCTTGGTTGGCAAAACAGAAATTAAAAAGAAAAAGGTGTTCGAGCCAAGGATCGAACCCGGGTTGTCTTGGTTGGGGCAGTTAGCGAAAGGAGGTGTTTCCAGTTGTGCCGGGTAAGTAGTTTGTGCTCTTGTTTCGTTGGTGTGTTGCTTATCCCGTGGTTGCTTGGGATTTGGAGTAAAATTAGAAGCTAACGGTTGGGGGTTGTTTCATTTGTTCCAGAATACAGAAAGTTGGCTCCTCTCCTTCTCCCTCTTGTACTTGGCGATTCCTCCATCTCCCGAGCGCCGTCTCCGATCGCTCAAGCCGTGAAGGTAAGCTCTCGTCTTTTCCTTTTGTTCTTCCGATTTTCATTCGTCTCATCTCCATTCCGACTTAATTGCTGCCTTTGTTCATCCGAGACAGCCCTTGCAGCAGTCCATCCGCACGCCCAGCCGCTCGCGCGCTCGCCTGGCCGATCGCAGTCCCTCGCGATCGCCCGCCAGCCCTGCAGCGCCCCATCGCCGATTGCAGCCCCTCGCGATCGCCCGCCAGCCCTGTAGCTCCCCATCGCCGATCGTAGCCCCTCGCGATCTCCCACACGCCCGCGTCGTAGCCCCATCGCTAGCGAGCGCAGCAGCCCGATCGCCCCGTCGACGCTCGCCCATCGCAGCTGCACGCACACCCGCGCAGCCGCAGCAGCATCCGAACGCACGCCCGCGCCCTGCCAGCCGCACAGCAGCAGCCGTTGCTCGCCGTGCCGCACACCCTTGCCGAGCCTGCCGCTCATGCCCACGAGCAGCCCGTCCGCACGCCAGCTCCATGCAGTGTGCCTTGCAGCCGAGACACCCCTGGTGCTTGGTCGAGTTGTGTGAGTTGCTTTCGACCGAGCCGAGCTTCTGTTGAATTATATTTAGGGCCTATTGTTAGTGATGTAATTACTGTTTGATTGTTAGGGTCCGTTAGCTAGCTCGTGTTCATTTGCAGCTCGGGAGTCCTCTTGTGTGTTTGTTTGTCTTCCGATTCAGGTAAGGATTTCTTACCGGAGTTGTGTGGGCCCTGCGATATTTCTGTGATTACCAGCATGTCTAGTTGTTAGGT

mRNA sequence

AAAAGTATCCTCAGTGGAGAAATGCAATGCAAAATGAATATGATACTCTTCTCGAACAAGAAACTTGGACCTTAGTTCCTTTACCTCTCAACAAACAAGTCATTGGATATAAAAGATATATAGACTTAAGATGAATCCTGATGGAAGCATTGCTCGACACAATGCACGTTTAGTTGCGAAAGGGTATCATCAAGAGGAAGGTATTGATTATAAGGAAACCTTCAGCCCTGTTATAAAGAAACCAACTGTTAGAGTTATAATTTCCTTAGTTGTTTCTTTTGGTTGGTCATTAAGGCAACTTGATGTGAAGAATTGTTACGGCCCAGGTTTTCATCCCGGTTTTCCAGGTTCTATGCCCCGGGAGTGTTTGGAGAGGTTTGTGGCCTTGGTTGGCAAAACAGAAATTAAAAAGAAAAAGGTGTTCGAGCCAAGGATCGAACCCGGGTTGTCTTGGTTGGGGCAGTTAGCGAAAGGAGGTGTTTCCAGTTGTGCCGGAATACAGAAAGTTGGCTCCTCTCCTTCTCCCTCTTGTACTTGGCGATTCCTCCATCTCCCGAGCGCCGTCTCCGATCGCTCAAGCCGTGAAGCCCTTGCAGCAGTCCATCCGCACGCCCAGCCGCTCGCGCGCTCGCCTGGCCGATCGCAGTCCCTCGCGATCGCCCGCCAGCCCTGCAGCGCCCCATCGCCGATTGCAGCCCCTCGCGATCGCCCGCCAGCCCTGTAGCTCCCCATCGCCGATCGTAGCCCCTCGCGATCTCCCACACGCCCGCGTCGTAGCCCCATCGCTAGCGAGCGCAGCAGCCCGATCGCCCCGTCGACGCTCGCCCATCGCAGCTGCACGCACACCCGCGCAGCCGCAGCAGCATCCGAACGCACGCCCGCGCCCTGCCAGCCGCACAGCAGCAGCCGTTGCTCGCCGTGCCGCACACCCTTGCCGAGCCTGCCGCTCATGCCCACGAGCAGCCCGTCCGCACGCCAGCTCCATGCAGTGTGCCTTGCAGCCGAGACACCCCTGGTGCTTGGTCGAGTTGTGGTCCGTTAGCTAGCTCGTGTTCATTTGCAGCTCGGGAGTCCTCTTGTGTGTTTGTTTGTCTTCCGATTCAGGTAAGGATTTCTTACCGGAGTTGTGTGGGCCCTGCGATATTTCTGTGATTACCAGCATGTCTAGTTGTTAGGT

Coding sequence (CDS)

ATGAATCCTGATGGAAGCATTGCTCGACACAATGCACGTTTAGTTGCGAAAGGGTATCATCAAGAGGAAGGTATTGATTATAAGGAAACCTTCAGCCCTGTTATAAAGAAACCAACTGTTAGAGTTATAATTTCCTTAGTTGTTTCTTTTGGTTGGTCATTAAGGCAACTTGATGTGAAGAATTGTTACGGCCCAGGTTTTCATCCCGGTTTTCCAGGTTCTATGCCCCGGGAGTGTTTGGAGAGGTTTGTGGCCTTGGTTGGCAAAACAGAAATTAAAAAGAAAAAGGTGTTCGAGCCAAGGATCGAACCCGGGTTGTCTTGGTTGGGGCAGTTAGCGAAAGGAGGTGTTTCCAGTTGTGCCGGAATACAGAAAGTTGGCTCCTCTCCTTCTCCCTCTTGTACTTGGCGATTCCTCCATCTCCCGAGCGCCGTCTCCGATCGCTCAAGCCGTGAAGCCCTTGCAGCAGTCCATCCGCACGCCCAGCCGCTCGCGCGCTCGCCTGGCCGATCGCAGTCCCTCGCGATCGCCCGCCAGCCCTGCAGCGCCCCATCGCCGATTGCAGCCCCTCGCGATCGCCCGCCAGCCCTGTAG

Protein sequence

MNPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKNCYGPGFHPGFPGSMPRECLERFVALVGKTEIKKKKVFEPRIEPGLSWLGQLAKGGVSSCAGIQKVGSSPSPSCTWRFLHLPSAVSDRSSREALAAVHPHAQPLARSPGRSQSLAIARQPCSAPSPIAAPRDRPPAL

Homology

[Close]

BLAST of Sed0012625 vs. NCBI nr
Match: KAA0054997.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-18
Identity = 43/62 (69.35%), Postives = 53/62 (85.48%), Query Frame = 0


Query: 2   NPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKN 61
           NPDG+I RH ARLVAKGYHQ+EGID++ETF P++KKPTVR+++SL   F W LRQLDVKN
Sbjct: 127 NPDGTITRHKARLVAKGYHQQEGIDFEETFIPIVKKPTVRIVLSLATHFEWKLRQLDVKN 186

Query: 62  CY 64
            +
Sbjct: 187 SF 188

[Close]

BLAST of Sed0012625 vs. NCBI nr
Match: TYK17991.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 102.4 bits (254), Expect = 4.4e-18
Identity = 43/62 (69.35%), Postives = 55/62 (88.71%), Query Frame = 0


Query: 2   NPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKN 61
           NPDG+IAR+ ARLVAKGYHQ+EGI+++ETFSPV+KKPTV++++SL   F W LRQLDVKN
Sbjct: 127 NPDGTIARYKARLVAKGYHQQEGIEFEETFSPVVKKPTVQIVLSLAAHFEWKLRQLDVKN 186

Query: 62  CY 64
            +
Sbjct: 187 AF 188

[Close]

BLAST of Sed0012625 vs. NCBI nr
Match: PRQ47733.1 (putative RNA-directed DNA polymerase [Rosa chinensis])

HSP 1 Score: 101.7 bits (252), Expect = 7.5e-18
Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 1   MNPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVK 60
           +NPDG++ RH A+LVAKG+HQ +GIDY ETFSP+IK  T+RV++ L VS GWSLRQLDVK
Sbjct: 36  LNPDGTVERHKAKLVAKGFHQHQGIDYDETFSPMIKPATIRVVLCLAVSRGWSLRQLDVK 95

Query: 61  NCYGPGF 68
           N +  GF
Sbjct: 96  NAFLHGF 102

[Close]

BLAST of Sed0012625 vs. NCBI nr
Match: TYJ96936.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-17
Identity = 42/62 (67.74%), Postives = 52/62 (83.87%), Query Frame = 0


Query: 2   NPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKN 61
           NPDG+IARH ARLVAKGYHQ +G D+ ETFSPV+KKPT+R+I++L   + WSL QLDVKN
Sbjct: 116 NPDGTIARHKARLVAKGYHQVQGFDFDETFSPVVKKPTIRIILALAAQYNWSLTQLDVKN 175

Query: 62  CY 64
            +
Sbjct: 176 AF 177

[Close]

BLAST of Sed0012625 vs. NCBI nr
Match: PRQ31173.1 (putative RNA-directed DNA polymerase [Rosa chinensis])

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-17
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 2    NPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKN 61
            NPDGS+ R  ARLVAKG+HQ++GID+ ETFSPVIK  T+R +ISL VS GWSLRQLDVKN
Sbjct: 990  NPDGSVERFKARLVAKGFHQQQGIDFHETFSPVIKPATIRTVISLAVSRGWSLRQLDVKN 1049

Query: 62   CYGPGF 68
             +  GF
Sbjct: 1050 AFLHGF 1055

[Close]

BLAST of Sed0012625 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.1e-15
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 2    NPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKN 61
            N DGS+ R+ ARLVAKGY+Q  G+DY ETFSPVIK  ++R+++ + V   W +RQLDV N
Sbjct: 1009 NSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNN 1068

Query: 62   CYGPG 67
             +  G
Sbjct: 1069 AFLQG 1073

[Close]

BLAST of Sed0012625 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.1e-15
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 2    NPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKN 61
            N DGS+ R+ ARLVAKGY+Q  G+DY ETFSPVIK  ++R+++ + V   W +RQLDV N
Sbjct: 992  NSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNN 1051

Query: 62   CYGPG 67
             +  G
Sbjct: 1052 AFLQG 1056

[Close]

BLAST of Sed0012625 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-09
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 4   DGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKNCY 63
           D  + R+ ARLV KG+ Q++GID+ E FSPV+K  ++R I+SL  S    + QLDVK  +
Sbjct: 868 DCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAF 927

[Close]

BLAST of Sed0012625 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 59.7 bits (143), Expect = 4.3e-08
Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 2    NPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKN 61
            N  G+  R+ ARLVA+G+ Q+  IDY+ETF+PV +  + R I+SLV+ +   + Q+DVK 
Sbjct: 946  NELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKT 1005

Query: 62   CY 64
             +
Sbjct: 1006 AF 1007

[Close]

BLAST of Sed0012625 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.8e-07
Identity = 24/46 (52.17%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 1   MNPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISL 47
           ++ DG++ R  ARLVAKG+HQEEGI + ET+SPV++  T+R I+++
Sbjct: 79  LHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124

[Close]

BLAST of Sed0012625 vs. ExPASy TrEMBL
Match: A0A5A7UKB0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001460 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-18
Identity = 43/62 (69.35%), Postives = 53/62 (85.48%), Query Frame = 0


Query: 2   NPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKN 61
           NPDG+I RH ARLVAKGYHQ+EGID++ETF P++KKPTVR+++SL   F W LRQLDVKN
Sbjct: 127 NPDGTITRHKARLVAKGYHQQEGIDFEETFIPIVKKPTVRIVLSLATHFEWKLRQLDVKN 186

Query: 62  CY 64
            +
Sbjct: 187 SF 188

[Close]

BLAST of Sed0012625 vs. ExPASy TrEMBL
Match: A0A5D3D170 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003000 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.1e-18
Identity = 43/62 (69.35%), Postives = 55/62 (88.71%), Query Frame = 0


Query: 2   NPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKN 61
           NPDG+IAR+ ARLVAKGYHQ+EGI+++ETFSPV+KKPTV++++SL   F W LRQLDVKN
Sbjct: 127 NPDGTIARYKARLVAKGYHQQEGIEFEETFSPVVKKPTVQIVLSLAAHFEWKLRQLDVKN 186

Query: 62  CY 64
            +
Sbjct: 187 AF 188

[Close]

BLAST of Sed0012625 vs. ExPASy TrEMBL
Match: A0A2P6RMS8 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0102931 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.7e-18
Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 1   MNPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVK 60
           +NPDG++ RH A+LVAKG+HQ +GIDY ETFSP+IK  T+RV++ L VS GWSLRQLDVK
Sbjct: 36  LNPDGTVERHKAKLVAKGFHQHQGIDYDETFSPMIKPATIRVVLCLAVSRGWSLRQLDVK 95

Query: 61  NCYGPGF 68
           N +  GF
Sbjct: 96  NAFLHGF 102

[Close]

BLAST of Sed0012625 vs. ExPASy TrEMBL
Match: A0A2N9GZI1 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32673 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.7e-18
Identity = 45/62 (72.58%), Postives = 55/62 (88.71%), Query Frame = 0


Query: 2    NPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKN 61
            N DG+IAR+ ARLVAKG+HQ+ G+D+ ETFSPV+K PTVR+I+SLVVS GWSLRQLDVKN
Sbjct: 968  NSDGTIARYKARLVAKGFHQQYGVDFDETFSPVVKPPTVRLILSLVVSLGWSLRQLDVKN 1027

Query: 62   CY 64
             +
Sbjct: 1028 AF 1029

[Close]

BLAST of Sed0012625 vs. ExPASy TrEMBL
Match: A0A2P6QAI9 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0032551 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.2e-18
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 2    NPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKN 61
            NPDGS+ R  ARLVAKG+HQ++GID+ ETFSPVIK  T+R +ISL VS GWSLRQLDVKN
Sbjct: 990  NPDGSVERFKARLVAKGFHQQQGIDFHETFSPVIKPATIRTVISLAVSRGWSLRQLDVKN 1049

Query: 62   CYGPGF 68
             +  GF
Sbjct: 1050 AFLHGF 1055

[Close]

BLAST of Sed0012625 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-13
Identity = 32/62 (51.61%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 2   NPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISLVVSFGWSLRQLDVKN 61
           N DG+I R+ ARLVAKGY Q+EGID+ ETFSPV K  +V++I+++   + ++L QLD+ N
Sbjct: 138 NSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISN 197

Query: 62  CY 64
            +
Sbjct: 198 AF 199

[Close]

BLAST of Sed0012625 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-08
Identity = 24/46 (52.17%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 1   MNPDGSIARHNARLVAKGYHQEEGIDYKETFSPVIKKPTVRVIISL 47
           ++ DG++ R  ARLVAKG+HQEEGI + ET+SPV++  T+R I+++
Sbjct: 79  LHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124

The following BLAST results are available for this feature:

BLAST of Sed0012625 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054997.1	2.6e-18	69.35	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK17991.1	4.4e-18	69.35	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
PRQ47733.1	7.5e-18	65.67	putative RNA-directed DNA polymerase [Rosa chinensis]	[more]
TYJ96936.1	1.3e-17	67.74	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
PRQ31173.1	1.3e-17	69.70	putative RNA-directed DNA polymerase [Rosa chinensis]	[more]

BLAST of Sed0012625 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	8.1e-15	53.85	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	8.1e-15	53.85	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	1.3e-09	46.67	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.3e-08	43.55	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92520	2.8e-07	52.17	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0012625 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKB0	1.3e-18	69.35	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3D170	2.1e-18	69.35	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A2P6RMS8	3.7e-18	65.67	Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2...	[more]
A0A2N9GZI1	3.7e-18	72.58	Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB...	[more]
A0A2P6QAI9	6.2e-18	69.70	Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5...	[more]

BLAST of Sed0012625 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.1e-13	51.61	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	2.0e-08	52.17	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 8..63 e-value: 6.1E-13 score: 48.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..197
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 2..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012625.1	Sed0012625.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding