Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACGTGTGTCGCCATTGTCAAAACCCCTTCGCCTCGAGTTCTAAACTTTCAGCATTCTCCGTTCGAAAGCAAGCTCGATTAGGGCTTGAGTCCAATCGCTGGGTTTCCTTCTCCATTTTCATCTTCCGATGAAATCAATTCTTCGAGATTTTGCAAGATTACATCTCCATTAACGATCTTGTGCGGAAAACGCAGAACAATCGAAAATGGGGTTGATCCATCTTCCAATCGACGTTGCCCTGAAAATCGCCTCTTCTCTTCAGGTTTCTATGGAGTTTTGTATCATTCTTATCTTTGAATTTTACTGTAATAGCATTTTTCTAGGGTTAATTGATTTCTCTCTGTGGATTTTGGGGCTGTGATGAAGGCATCGGACATATGTGCTTTGGGCAGTTGCTCGCGATTTTGCAGGGAGCTTTTCGATTCCGATCCTCTGTGGGAGACTCTCGCTAGAGAACGATGGGATTATATTCATGCTTCTTCGTCTTCTGATTGTTCTTCATCTTCGTCGATTCTTGCAGAATCCTCCATTTCCATGGTGCTATTTCTTTTTTATGCTTCTTAATTTGGTTAGTTATTTACCATGTTGGGTGAAAATTTTAATGGTTTGGTATAGTTTAGGTATCTTGAAATCAACCGAGAGAATGGGTGCTTTCGAATTTTCCCAGTCCCTGTCTGAAATGGTTGATTATTTATTTTGATGATAATTTACTTGTTTGTTCTTTCTCCTTTGTGATTCAGATGTAGTTGAATTTGACTGTTTGAATTTTCTTTGTCCCTGTGAAATGATTGATTATTTTTATGGAAACACACCTTGGATATTATTTTCGTTTGCATGCCGTCTATCCCTACAACATTTGGACTAGTTTGGTGGCCACCATCGATTAAGCATTGGATATTTATCTAGACTTGAACTTAAGGTTGGTCTGTGTCTGTCACATCTTGAATATTTTGCTTGTATTCTTAGTTTCTTGAAAGTAATGAAGTGATTTGAAAGCTTGTTTTTTTTAGTTGAATGAACCCTTTTGAATTTTCACCATCCCTATCTGAAATGATTGGTTTACTAGTGAAACATACAAAGGATGTTTATCTTGAGTTGAACTTAAGTTAGATATTTACCTTGAGTCTTTGTTATTATGTTGGTTATGATTTTCTGGTTGCGAACAAACGAAATGGAATGTCTTCCAGAGATGGAAAAGCTTCTACATCCAGAGGCATATTGAGATATTGGGAAGAGTCCAAGCAGTAGTGAAGTTTATAGAACAATGCTCTCCTGCTACCCCGATCGAGGGCGGAGACTATCTCAGGACAATTGTAGGCTTGCGAGATTTGAAGCTTAGTTTTATAGATGCTCAAATGGTGCTTTTCAAACCTCAACTTAATGGGCTGCTGAACTTGGTTGGCTTACACTACTGTACACATTTGCTTGAAGTTCCTGTACGTCCTGCTGCTTTTGCCATTTTAGTTCAATCATTTGTGGGTTTAAATCATATTTTGGTTGTGAACTTTTATACTTGTTCCATTTTTGTTTAATCCTCAAATGTTCTATTTTATTCTTCAACTTTCAATTTTTTTGTTATAGTTCCATTTGTTCAGAATTTTGAATCTATTTTGAAAATTGGAACTTTTTATACATAGTTTCAAAGTGTTGTTTACTTGGACATTTTCTTTTCAAATAAAGTAATTAAAGGCATCTATGTTGGGTATTTGTTAAATACTTTGTAGAATTTTAATGACTGGTTCTTTATGGAAAGTTTAGGGATTAAAACAAAATATTTTGAAGTGTAAGGTCTTGATCAAATAGGATAAATATTAGAAGTTTAAAGTTATACACAATATTTTATTTGCTAATACAACAATGCAAGATCCTGGCTCATGATTTCAAAGCAAAATAACTTGGTAGTTAAAAATGTTTTGAGTGATAAAACTAGAACAACAGGTATAGGTGAAAGACTCTGTTCGGCATTCGAACTTTATAGGATAGATTCCAGCTTATTTTGTCTATCATGCACAAAATTCTGAAGTTGTTGATTTGATTTTCGACTTCTGGCAGGCCAATCAAGTCATGGAGGCACTTCAAAGATACAAGATTTCGGAGAGGCGTGTATGTGTGAAGTGGTGGAAGCTGGGAAGATGGTTTTATGGCTTCCGCATGAGAGACGAACAGCAAACTCGTCGAATCTCTCTGGCAGATCTCTTAACAGTGGAAGGGGAAGATGTTCTTGGGGTGCTTAGTCGAGGTGCAGTTCATGAGGTTCTCCGGGTTCAGGTTTCTGTAAGTGATCCCTTTGGCACTCACTGGTCTCAACAAAGCACATAAAACACCCTTTGCATCTCTATAAGCATTCTGCAGCTGCAATGTTATATTTGCCAATGGTTGTTTGTGCATTAAAAAGTTTCTAATTTATTTACTTGTAAATTCTTGTAGATATAAATATGTAAAATATCTGTTGGCCATTCAGATTTGTCTTATAAGTTGCAGTTCACCAACATATGCACATCAATAAATAATGTTTTCTTTAATTATTAAGGGCGTATAGCTCAAAGTATTGGATTTTACAATCTCTTCATGTATGATAATCTTATTTTATAGGCTCATA
mRNA sequence
CACGTGTGTCGCCATTGTCAAAACCCCTTCGCCTCGAGTTCTAAACTTTCAGCATTCTCCGTTCGAAAGCAAGCTCGATTAGGGCTTGAGTCCAATCGCTGGGTTTCCTTCTCCATTTTCATCTTCCGATGAAATCAATTCTTCGAGATTTTGCAAGATTACATCTCCATTAACGATCTTGTGCGGAAAACGCAGAACAATCGAAAATGGGGTTGATCCATCTTCCAATCGACGTTGCCCTGAAAATCGCCTCTTCTCTTCAGGCATCGGACATATGTGCTTTGGGCAGTTGCTCGCGATTTTGCAGGGAGCTTTTCGATTCCGATCCTCTGTGGGAGACTCTCGCTAGAGAACGATGGGATTATATTCATGCTTCTTCGTCTTCTGATTGTTCTTCATCTTCGTCGATTCTTGCAGAATCCTCCATTTCCATGAGATGGAAAAGCTTCTACATCCAGAGGCATATTGAGATATTGGGAAGAGTCCAAGCAGTAGTGAAGTTTATAGAACAATGCTCTCCTGCTACCCCGATCGAGGGCGGAGACTATCTCAGGACAATTGTAGGCTTGCGAGATTTGAAGCTTAGTTTTATAGATGCTCAAATGGTGCTTTTCAAACCTCAACTTAATGGGCTGCTGAACTTGGTTGGCTTACACTACTGTACACATTTGCTTGAAGTTCCTGCCAATCAAGTCATGGAGGCACTTCAAAGATACAAGATTTCGGAGAGGCGTGTATGTGTGAAGTGGTGGAAGCTGGGAAGATGGTTTTATGGCTTCCGCATGAGAGACGAACAGCAAACTCGTCGAATCTCTCTGGCAGATCTCTTAACAGTGGAAGGGGAAGATGTTCTTGGGGTGCTTAGTCGAGGTGCAGTTCATGAGGTTCTCCGGGTTCAGGTTTCTGTAAGTGATCCCTTTGGCACTCACTGGTCTCAACAAAGCACATAAAACACCCTTTGCATCTCTATAAGCATTCTGCAGCTGCAATGTTATATTTGCCAATGGTTGTTTGTGCATTAAAAAGTTTCTAATTTATTTACTTGTAAATTCTTGTAGATATAAATATGTAAAATATCTGTTGGCCATTCAGATTTGTCTTATAAGTTGCAGTTCACCAACATATGCACATCAATAAATAATGTTTTCTTTAATTATTAAGGGCGTATAGCTCAAAGTATTGGATTTTACAATCTCTTCATGTATGATAATCTTATTTTATAGGCTCATA
Coding sequence (CDS)
ATGGGGTTGATCCATCTTCCAATCGACGTTGCCCTGAAAATCGCCTCTTCTCTTCAGGCATCGGACATATGTGCTTTGGGCAGTTGCTCGCGATTTTGCAGGGAGCTTTTCGATTCCGATCCTCTGTGGGAGACTCTCGCTAGAGAACGATGGGATTATATTCATGCTTCTTCGTCTTCTGATTGTTCTTCATCTTCGTCGATTCTTGCAGAATCCTCCATTTCCATGAGATGGAAAAGCTTCTACATCCAGAGGCATATTGAGATATTGGGAAGAGTCCAAGCAGTAGTGAAGTTTATAGAACAATGCTCTCCTGCTACCCCGATCGAGGGCGGAGACTATCTCAGGACAATTGTAGGCTTGCGAGATTTGAAGCTTAGTTTTATAGATGCTCAAATGGTGCTTTTCAAACCTCAACTTAATGGGCTGCTGAACTTGGTTGGCTTACACTACTGTACACATTTGCTTGAAGTTCCTGCCAATCAAGTCATGGAGGCACTTCAAAGATACAAGATTTCGGAGAGGCGTGTATGTGTGAAGTGGTGGAAGCTGGGAAGATGGTTTTATGGCTTCCGCATGAGAGACGAACAGCAAACTCGTCGAATCTCTCTGGCAGATCTCTTAACAGTGGAAGGGGAAGATGTTCTTGGGGTGCTTAGTCGAGGTGCAGTTCATGAGGTTCTCCGGGTTCAGGTTTCTGTAAGTGATCCCTTTGGCACTCACTGGTCTCAACAAAGCACATAA
Protein sequence
MGLIHLPIDVALKIASSLQASDICALGSCSRFCRELFDSDPLWETLARERWDYIHASSSSDCSSSSSILAESSISMRWKSFYIQRHIEILGRVQAVVKFIEQCSPATPIEGGDYLRTIVGLRDLKLSFIDAQMVLFKPQLNGLLNLVGLHYCTHLLEVPANQVMEALQRYKISERRVCVKWWKLGRWFYGFRMRDEQQTRRISLADLLTVEGEDVLGVLSRGAVHEVLRVQVSVSDPFGTHWSQQST
Homology
BLAST of Sed0012602 vs. NCBI nr
Match:
XP_023540636.1 (uncharacterized protein LOC111800940 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 404.8 bits (1039), Expect = 5.2e-109
Identity = 202/241 (83.82%), Postives = 217/241 (90.04%), Query Frame = 0
Query: 1 MGLIHLPIDVALKIASSLQASDICALGSCSRFCRELFDSDPLWETLARERWDYIHASSSS 60
MGL+HLP+DVALKIASSLQASDICALG CSR CRELFDSD LWE+LARERW YI+ASSS+
Sbjct: 1 MGLLHLPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSST 60
Query: 61 DCSSSSSILAESSISMRWKSFYIQRHIEILGRVQAVVKFIEQCSPATPIEGGDYLRTIVG 120
SSSS A+ ISM WKSFYI RHIEILGR QA VKFIEQC P+TPIEGGDYLRTI+G
Sbjct: 61 --GSSSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILG 120
Query: 121 LRDLKLSFIDAQMVLFKPQLNGLLNLVGLHYCTHLLEVPANQVMEALQRYKISERRVCVK 180
LRDLKLSFID QMVLFKPQLNGLLNLVGLHYCT+LLE+PA +VMEALQR KISE+ VCVK
Sbjct: 121 LRDLKLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVK 180
Query: 181 WWKLGRWFYGFRMRDEQQTRRISLADLLTVEGEDVLGVLSRGAVHEVLRVQVSVSDPFGT 240
WWKLGRWFYGFRMRDEQ TRR+SLA+LLT EGEDVLGVLSRG VHEVLRVQVSVSDPF +
Sbjct: 181 WWKLGRWFYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQVSVSDPFDS 239
Query: 241 H 242
H
Sbjct: 241 H 239
BLAST of Sed0012602 vs. NCBI nr
Match:
KAG6597495.1 (hypothetical protein SDJN03_10675, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028954.1 hypothetical protein SDJN02_10137 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-108
Identity = 200/241 (82.99%), Postives = 217/241 (90.04%), Query Frame = 0
Query: 1 MGLIHLPIDVALKIASSLQASDICALGSCSRFCRELFDSDPLWETLARERWDYIHASSSS 60
MGL+HLP+DVALKIASSLQASDICALG CSR CRE+FDSD LWE+LARERW YI+ASSS+
Sbjct: 1 MGLLHLPLDVALKIASSLQASDICALGCCSRLCREIFDSDCLWESLARERWPYIYASSST 60
Query: 61 DCSSSSSILAESSISMRWKSFYIQRHIEILGRVQAVVKFIEQCSPATPIEGGDYLRTIVG 120
SSSS A+ ISM WKSFYI RHIEILGR QA VKFIEQC P+TPIEGGDYLRTI+G
Sbjct: 61 --GSSSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILG 120
Query: 121 LRDLKLSFIDAQMVLFKPQLNGLLNLVGLHYCTHLLEVPANQVMEALQRYKISERRVCVK 180
LRDLKLSFID QMVLFKPQLNGLLNLVGLHYCT+LLE+PA +VMEALQR KISE+ +CVK
Sbjct: 121 LRDLKLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHICVK 180
Query: 181 WWKLGRWFYGFRMRDEQQTRRISLADLLTVEGEDVLGVLSRGAVHEVLRVQVSVSDPFGT 240
WWKLGRWFYGFRMRDEQ TRR+SLA+LLT EGEDVLGVLSRG VHEVLRVQVSVSDPF +
Sbjct: 181 WWKLGRWFYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQVSVSDPFDS 239
Query: 241 H 242
H
Sbjct: 241 H 239
BLAST of Sed0012602 vs. NCBI nr
Match:
XP_022950192.1 (uncharacterized protein LOC111453355 [Cucurbita moschata])
HSP 1 Score: 403.3 bits (1035), Expect = 1.5e-108
Identity = 200/241 (82.99%), Postives = 217/241 (90.04%), Query Frame = 0
Query: 1 MGLIHLPIDVALKIASSLQASDICALGSCSRFCRELFDSDPLWETLARERWDYIHASSSS 60
MGL+HLP+DVALKIASSLQASDICALG CSR CRELFDSD LWE+LARERW YI+ASSS+
Sbjct: 1 MGLLHLPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSST 60
Query: 61 DCSSSSSILAESSISMRWKSFYIQRHIEILGRVQAVVKFIEQCSPATPIEGGDYLRTIVG 120
SSSS A+ ISM WKSFYI RHIEILGR QA VKFIEQC P+TPIEGGDYLRTI+G
Sbjct: 61 --GSSSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILG 120
Query: 121 LRDLKLSFIDAQMVLFKPQLNGLLNLVGLHYCTHLLEVPANQVMEALQRYKISERRVCVK 180
LRDLKLSFID QMVLFKPQLNGLLNLVGLHYCT+LLE+PA +VMEALQR KISE+ +CVK
Sbjct: 121 LRDLKLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHICVK 180
Query: 181 WWKLGRWFYGFRMRDEQQTRRISLADLLTVEGEDVLGVLSRGAVHEVLRVQVSVSDPFGT 240
WWKLGRWFYGFRMRDEQ TRR+SLA+L+T EGEDVLGVLSRG VHEVLRVQVSVSDPF +
Sbjct: 181 WWKLGRWFYGFRMRDEQHTRRVSLAELVTAEGEDVLGVLSRGPVHEVLRVQVSVSDPFDS 239
Query: 241 H 242
H
Sbjct: 241 H 239
BLAST of Sed0012602 vs. NCBI nr
Match:
XP_022973765.1 (uncharacterized protein LOC111472328 isoform X1 [Cucurbita maxima] >XP_022975461.1 uncharacterized protein LOC111474828 isoform X1 [Cucurbita maxima])
HSP 1 Score: 401.4 bits (1030), Expect = 5.8e-108
Identity = 200/241 (82.99%), Postives = 216/241 (89.63%), Query Frame = 0
Query: 1 MGLIHLPIDVALKIASSLQASDICALGSCSRFCRELFDSDPLWETLARERWDYIHASSSS 60
MGL+HLP+DVALKIASSLQASDICALG CSR CRELFDSD LWE+LARERW YI+ASSS+
Sbjct: 1 MGLLHLPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSST 60
Query: 61 DCSSSSSILAESSISMRWKSFYIQRHIEILGRVQAVVKFIEQCSPATPIEGGDYLRTIVG 120
SSSS A+ ISM WKSFYI RHIEILGR QA VKFIEQC P TPIEGGDYLRTI+G
Sbjct: 61 --GSSSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPLTPIEGGDYLRTILG 120
Query: 121 LRDLKLSFIDAQMVLFKPQLNGLLNLVGLHYCTHLLEVPANQVMEALQRYKISERRVCVK 180
L+DLKLSFID QMVLFKPQLNGLLNLVGLHYCT+LLE+PA +VMEALQR KISE+ VCVK
Sbjct: 121 LQDLKLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVK 180
Query: 181 WWKLGRWFYGFRMRDEQQTRRISLADLLTVEGEDVLGVLSRGAVHEVLRVQVSVSDPFGT 240
WWKLGRWFYGFRMRDEQ TRR+SLA+L+T EGEDVLGVLSRG VHEVLRVQVSVSDPF +
Sbjct: 181 WWKLGRWFYGFRMRDEQHTRRVSLAELVTAEGEDVLGVLSRGPVHEVLRVQVSVSDPFDS 239
Query: 241 H 242
H
Sbjct: 241 H 239
BLAST of Sed0012602 vs. NCBI nr
Match:
XP_038893805.1 (uncharacterized protein LOC120082593 [Benincasa hispida])
HSP 1 Score: 393.7 bits (1010), Expect = 1.2e-105
Identity = 196/243 (80.66%), Postives = 211/243 (86.83%), Query Frame = 0
Query: 1 MGLIHLPIDVALKIASSLQASDICALGSCSRFCRELFDSDPLWETLARERWDYIHASSSS 60
MGL HLPID ALKIASSLQASDIC+LG CSRFCR+L DSD LWE+LARERW YI+
Sbjct: 1 MGLNHLPIDTALKIASSLQASDICSLGCCSRFCRQLCDSDYLWESLARERWPYIN----- 60
Query: 61 DCSSSSSILAESSISMRWKSFYIQRHIEILGRVQAVVKFIEQCSPATPIEGGDYLRTIVG 120
SS S LA+S ISM WKS YIQRHIEILGR QA VKFIEQCSP+TPIEGGDYLRTI G
Sbjct: 61 --GSSPSTLAQSPISMGWKSLYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGG 120
Query: 121 LRDLKLSFIDAQMVLFKPQLNGLLNLVGLHYCTHLLEVPANQVMEALQRYKISERRVCVK 180
L DLKLSFIDAQMVLFKPQLN LLNLVGLHYC + L+VPANQVMEALQR K++ER +CVK
Sbjct: 121 LWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRNWLQVPANQVMEALQRCKVAERYICVK 180
Query: 181 WWKLGRWFYGFRMRDEQQTRRISLADLLTVEGEDVLGVLSRGAVHEVLRVQVSVSDPFGT 240
WWKLGRWFYGFRMRDEQQTRR+SLA+L+T EGEDVLGVLSRGAVHEVLRVQVS DPF +
Sbjct: 181 WWKLGRWFYGFRMRDEQQTRRVSLAELVTEEGEDVLGVLSRGAVHEVLRVQVSAGDPFAS 236
Query: 241 HWS 244
HWS
Sbjct: 241 HWS 236
BLAST of Sed0012602 vs. ExPASy TrEMBL
Match:
A0A6J1GE44 (uncharacterized protein LOC111453355 OS=Cucurbita moschata OX=3662 GN=LOC111453355 PE=4 SV=1)
HSP 1 Score: 403.3 bits (1035), Expect = 7.4e-109
Identity = 200/241 (82.99%), Postives = 217/241 (90.04%), Query Frame = 0
Query: 1 MGLIHLPIDVALKIASSLQASDICALGSCSRFCRELFDSDPLWETLARERWDYIHASSSS 60
MGL+HLP+DVALKIASSLQASDICALG CSR CRELFDSD LWE+LARERW YI+ASSS+
Sbjct: 1 MGLLHLPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSST 60
Query: 61 DCSSSSSILAESSISMRWKSFYIQRHIEILGRVQAVVKFIEQCSPATPIEGGDYLRTIVG 120
SSSS A+ ISM WKSFYI RHIEILGR QA VKFIEQC P+TPIEGGDYLRTI+G
Sbjct: 61 --GSSSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILG 120
Query: 121 LRDLKLSFIDAQMVLFKPQLNGLLNLVGLHYCTHLLEVPANQVMEALQRYKISERRVCVK 180
LRDLKLSFID QMVLFKPQLNGLLNLVGLHYCT+LLE+PA +VMEALQR KISE+ +CVK
Sbjct: 121 LRDLKLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHICVK 180
Query: 181 WWKLGRWFYGFRMRDEQQTRRISLADLLTVEGEDVLGVLSRGAVHEVLRVQVSVSDPFGT 240
WWKLGRWFYGFRMRDEQ TRR+SLA+L+T EGEDVLGVLSRG VHEVLRVQVSVSDPF +
Sbjct: 181 WWKLGRWFYGFRMRDEQHTRRVSLAELVTAEGEDVLGVLSRGPVHEVLRVQVSVSDPFDS 239
Query: 241 H 242
H
Sbjct: 241 H 239
BLAST of Sed0012602 vs. ExPASy TrEMBL
Match:
A0A6J1IEA8 (uncharacterized protein LOC111472328 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474828 PE=4 SV=1)
HSP 1 Score: 401.4 bits (1030), Expect = 2.8e-108
Identity = 200/241 (82.99%), Postives = 216/241 (89.63%), Query Frame = 0
Query: 1 MGLIHLPIDVALKIASSLQASDICALGSCSRFCRELFDSDPLWETLARERWDYIHASSSS 60
MGL+HLP+DVALKIASSLQASDICALG CSR CRELFDSD LWE+LARERW YI+ASSS+
Sbjct: 1 MGLLHLPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSST 60
Query: 61 DCSSSSSILAESSISMRWKSFYIQRHIEILGRVQAVVKFIEQCSPATPIEGGDYLRTIVG 120
SSSS A+ ISM WKSFYI RHIEILGR QA VKFIEQC P TPIEGGDYLRTI+G
Sbjct: 61 --GSSSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPLTPIEGGDYLRTILG 120
Query: 121 LRDLKLSFIDAQMVLFKPQLNGLLNLVGLHYCTHLLEVPANQVMEALQRYKISERRVCVK 180
L+DLKLSFID QMVLFKPQLNGLLNLVGLHYCT+LLE+PA +VMEALQR KISE+ VCVK
Sbjct: 121 LQDLKLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVK 180
Query: 181 WWKLGRWFYGFRMRDEQQTRRISLADLLTVEGEDVLGVLSRGAVHEVLRVQVSVSDPFGT 240
WWKLGRWFYGFRMRDEQ TRR+SLA+L+T EGEDVLGVLSRG VHEVLRVQVSVSDPF +
Sbjct: 181 WWKLGRWFYGFRMRDEQHTRRVSLAELVTAEGEDVLGVLSRGPVHEVLRVQVSVSDPFDS 239
Query: 241 H 242
H
Sbjct: 241 H 239
BLAST of Sed0012602 vs. ExPASy TrEMBL
Match:
A0A5A7U795 (F-box-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00440 PE=4 SV=1)
HSP 1 Score: 392.1 bits (1006), Expect = 1.7e-105
Identity = 194/247 (78.54%), Postives = 212/247 (85.83%), Query Frame = 0
Query: 1 MGLIHLPIDVALKIASSLQASDICALGSCSRFCRELFDSDPLWETLARERWDYIHASSSS 60
MG HLP D ALKIASSLQ S+IC+LG CSRFCR+L DSD LWE+LARERW YI+
Sbjct: 1 MGFDHLPTDTALKIASSLQVSEICSLGCCSRFCRQLCDSDYLWESLARERWPYIN----- 60
Query: 61 DCSSSSSILAESSISMRWKSFYIQRHIEILGRVQAVVKFIEQCSPATPIEGGDYLRTIVG 120
SSSS LA+S ISM WKSFYIQRHIEILGR QA VKF+EQCSP+TPIEGGDYLRTI G
Sbjct: 61 --GSSSSTLAQSPISMGWKSFYIQRHIEILGRAQAAVKFVEQCSPSTPIEGGDYLRTIGG 120
Query: 121 LRDLKLSFIDAQMVLFKPQLNGLLNLVGLHYCTHLLEVPANQVMEALQRYKISERRVCVK 180
L DLKLSF+DAQMVLFKPQLN LLNLVGLHYC L+VPANQ++EALQR KI+ER +CVK
Sbjct: 121 LWDLKLSFVDAQMVLFKPQLNELLNLVGLHYCRIWLQVPANQILEALQRCKIAERHICVK 180
Query: 181 WWKLGRWFYGFRMRDEQQTRRISLADLLTVEGEDVLGVLSRGAVHEVLRVQVSVSDPFGT 240
WWKLGRWFYGFRMRDEQQTRR+SLA+L+T EGEDVLGVLSRGAVHEVLRVQVSV D F
Sbjct: 181 WWKLGRWFYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAG 240
Query: 241 HWSQQST 248
HWS+QST
Sbjct: 241 HWSRQST 240
BLAST of Sed0012602 vs. ExPASy TrEMBL
Match:
A0A1S3AXY1 (uncharacterized protein LOC103483796 OS=Cucumis melo OX=3656 GN=LOC103483796 PE=4 SV=1)
HSP 1 Score: 392.1 bits (1006), Expect = 1.7e-105
Identity = 194/247 (78.54%), Postives = 212/247 (85.83%), Query Frame = 0
Query: 1 MGLIHLPIDVALKIASSLQASDICALGSCSRFCRELFDSDPLWETLARERWDYIHASSSS 60
MG HLP D ALKIASSLQ S+IC+LG CSRFCR+L DSD LWE+LARERW YI+
Sbjct: 1 MGFDHLPTDTALKIASSLQVSEICSLGCCSRFCRQLCDSDYLWESLARERWPYIN----- 60
Query: 61 DCSSSSSILAESSISMRWKSFYIQRHIEILGRVQAVVKFIEQCSPATPIEGGDYLRTIVG 120
SSSS LA+S ISM WKSFYIQRHIEILGR QA VKF+EQCSP+TPIEGGDYLRTI G
Sbjct: 61 --GSSSSTLAQSPISMGWKSFYIQRHIEILGRAQAAVKFVEQCSPSTPIEGGDYLRTIGG 120
Query: 121 LRDLKLSFIDAQMVLFKPQLNGLLNLVGLHYCTHLLEVPANQVMEALQRYKISERRVCVK 180
L DLKLSF+DAQMVLFKPQLN LLNLVGLHYC L+VPANQ++EALQR KI+ER +CVK
Sbjct: 121 LWDLKLSFVDAQMVLFKPQLNELLNLVGLHYCRIWLQVPANQILEALQRCKIAERHICVK 180
Query: 181 WWKLGRWFYGFRMRDEQQTRRISLADLLTVEGEDVLGVLSRGAVHEVLRVQVSVSDPFGT 240
WWKLGRWFYGFRMRDEQQTRR+SLA+L+T EGEDVLGVLSRGAVHEVLRVQVSV D F
Sbjct: 181 WWKLGRWFYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAG 240
Query: 241 HWSQQST 248
HWS+QST
Sbjct: 241 HWSRQST 240
BLAST of Sed0012602 vs. ExPASy TrEMBL
Match:
A0A0A0L7T9 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G151470 PE=4 SV=1)
HSP 1 Score: 391.7 bits (1005), Expect = 2.2e-105
Identity = 195/247 (78.95%), Postives = 213/247 (86.23%), Query Frame = 0
Query: 1 MGLIHLPIDVALKIASSLQASDICALGSCSRFCRELFDSDPLWETLARERWDYIHASSSS 60
MGL +L ID ALKIASSLQ SDIC+LG CSRFCR+L DSD LWE+LARERW YI+
Sbjct: 1 MGLDNLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYIN----- 60
Query: 61 DCSSSSSILAESSISMRWKSFYIQRHIEILGRVQAVVKFIEQCSPATPIEGGDYLRTIVG 120
SSSS LA+SSISM WKSFYIQRHIEI GR QA VKF+EQCSP+TPIEGGDYLRTI G
Sbjct: 61 --GSSSSTLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGG 120
Query: 121 LRDLKLSFIDAQMVLFKPQLNGLLNLVGLHYCTHLLEVPANQVMEALQRYKISERRVCVK 180
L DLKLSF+DAQMVLFKPQLN LLNLVGLHYC L++PANQ+MEALQR KI+ER +CVK
Sbjct: 121 LWDLKLSFVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVK 180
Query: 181 WWKLGRWFYGFRMRDEQQTRRISLADLLTVEGEDVLGVLSRGAVHEVLRVQVSVSDPFGT 240
WWKLGRWFYGFRMRDEQQTRR+SLA+L+T EGEDVLGVLSRGAVHEVLRVQVSV D F
Sbjct: 181 WWKLGRWFYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAG 240
Query: 241 HWSQQST 248
HWS+QST
Sbjct: 241 HWSRQST 240
BLAST of Sed0012602 vs. TAIR 10
Match:
AT4G15563.1 (unknown protein; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 126.7 bits (317), Expect = 2.6e-29
Identity = 64/152 (42.11%), Postives = 93/152 (61.18%), Query Frame = 0
Query: 85 RHIEILGRVQAVVKFIEQCSPATPIEGGDYLRTIVGLRDLKLSFIDAQMVLFKPQLNGLL 144
+H E+ R V+K++ + +E G YL + + ++ F D ++ FKP L+ LL
Sbjct: 2 QHKEMASRASEVIKYVTKSPATLSLEAGIYLHAVETMSSMRFGFQDVELFFFKPNLSVLL 61
Query: 145 NLVGLHYCTHLLEVPANQVMEALQRYKISERRVCVKWWKLGRWFYGFRMRDEQQTRRISL 204
NL+GL YC L+ QV++ L++ ISE+ V VKW LGRW G RMRD+ +R++SL
Sbjct: 62 NLIGLIYCIQHLKPRREQVVDVLRQCGISEQLVWVKWLTLGRWSGGSRMRDDIVSRQVSL 121
Query: 205 ADLLTVEGEDVLGVLSRGAVHEVLRVQVSVSD 237
D++T + E VL VL RG VHEVLRV +S D
Sbjct: 122 VDVVTGKEETVLRVLQRGVVHEVLRVCISTVD 153
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023540636.1 | 5.2e-109 | 83.82 | uncharacterized protein LOC111800940 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
KAG6597495.1 | 1.2e-108 | 82.99 | hypothetical protein SDJN03_10675, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022950192.1 | 1.5e-108 | 82.99 | uncharacterized protein LOC111453355 [Cucurbita moschata] | [more] |
XP_022973765.1 | 5.8e-108 | 82.99 | uncharacterized protein LOC111472328 isoform X1 [Cucurbita maxima] >XP_022975461... | [more] |
XP_038893805.1 | 1.2e-105 | 80.66 | uncharacterized protein LOC120082593 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1GE44 | 7.4e-109 | 82.99 | uncharacterized protein LOC111453355 OS=Cucurbita moschata OX=3662 GN=LOC1114533... | [more] |
A0A6J1IEA8 | 2.8e-108 | 82.99 | uncharacterized protein LOC111472328 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A5A7U795 | 1.7e-105 | 78.54 | F-box-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A1S3AXY1 | 1.7e-105 | 78.54 | uncharacterized protein LOC103483796 OS=Cucumis melo OX=3656 GN=LOC103483796 PE=... | [more] |
A0A0A0L7T9 | 2.2e-105 | 78.95 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G151470 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |
AT4G15563.1 | 2.6e-29 | 42.11 | unknown protein; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bac... | [more] |