Sed0012448 (gene) Chayote v1

Overview


Name	Sed0012448
Type	gene
Organism	Sechium edule (Chayote v1)
Description	rho GTPase-activating protein 2
Location	LG07: 2694498 .. 2698153 (+)
RNA-Seq Expression	Sed0012448
Synteny	Sed0012448

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCCGTTGAGAGACCTTTTTTTTTGAAAAGCGTTTTTAACTTCAAAGAACACAAATCCACAAATCCACTTCTTCAATGCAACAAATACAAACAAATCCACATTAAACCCACTTCCATTCAACAAACCCATCTCTCAATTTTTCAAAATCCCCCAAAAATCCTTCGAACAAAACCGACCCATTTTCCTCAGAGATCGAATCAGAATGACCGGCATTGTAATGGTGACAAGGGGCGGCGGCTGCGGCGGCGGAAAGCTCCTCAGAGGCGGCGGCGGCGGCGGAGGAAAAGGGTCGGTCGGCGATGACCAGAATCAGCTCTCTTTGGTGGATGTTATGTTGGCGGCTTTAAGGAAATCGATGGTTTATTGCCGTGTGGATCGTGGGGATGAGCTTATTTCAACTGTTCATCAGATGGAAATCGGATGGCCCACTAATGTTCTACATATTGCCCATGTCACTTTCGATCGATTCAATGGGTTTTTGGGGCTTCCGGTTGAGTTTGAGGTTGAGATTCCTAGCTCTGTTCCAAGTGCAAGGTGAGGATTTTGCTCTGTTTTTTCTTGTTGGGTTTAATCTGTTCAATGTTTTGTGGGTTGTTGTTTTTAAACTTAATTTTGAGTTTTGTTTTTTGGTTTGGGGTTTTGGTCTTGGAGTTTCTAAAGAGCTCTGGTTCCAAGTGTTAGGTGAGGAGTTTGCTCTGTTCTTGGTTGTTGGGTTTTTTTTTTTTTTTTGAGAAATCTTGGTTGTTGGGTTTTAATCTTGGCATTTTAAAGTTCAGTGTTTTGTTAGGTTGTTGATTTTTTAGATTAATTTTGAGTTTTTTTGGTTTGGTTCTTGGTTTGGGAGTTTCTAAGTGGCTGTTCTTGTCATTGAATGGAGCTCATGATGAGACTTGAATCTTGGCCTTTTGACTTCTCAAATGTTTGGTTGGGTTCTTAGACTTTGGGCTGAACTTTGAGCTTTTTTGTAGGCTTTTTTGTTTAGAGTTTGAAAGTAGCTATTCTTACTTTTGGAAGGAGCTTTTGACTTCAAATCTTTTGTTGGGTTCTTACTAATTGAACATATATTTCAGCTTTTCTCTTGGAGTTTTAGTCTTTGGGTATCTAAGTTCTAGTGATTGCCTGTTCTATGTCAAGCCTAGGTGAGGAGTTTGCTTTGTTCTTTCTTGTTGGGATTTAGTCTTTGCGTTTTTTAGCTCAATGTTTTGTTGAATTGTTGCTTTTTAGCTTAATTTTGAGCTTTTTTTTTGGTTGGGCTCTTGGTTTGGGAGTTCCTAGAGGGCTGTTTTTGCCATTGAATTGAGTTGATTTGCTTCTTAAGACTTGAGTGTTGCATTTTAGATTTCAAAGGTTTGGTTGGGTTATTGTTTTTTGGGCTCAACTTTGAGCTTTTTTGCTGTCTTTTTAGTTTAAAAGTTTCTAAAGGGCTGTTTTTTGCCATTGAATAGCGCTCATTGGCTTCTTAGAGCTCATGTTTAGACTTGAATCTTGACCTTTTCCCTTCAAATGTGTGGTTGGGTTGTTGGATTTTGGGCTCAACTTTTGAGATTTTTTCTTGGCTTTTTAGTTTTAGTTTGGAAGCACAGCAGTAGCTTTTTTTACCTTTTGAAGGGGCTTTTGACTTGACTTTAATCTTAGCTTCTTGACTTCAAATCTTTTGTTGGGTTCTTATTTCATGGACTCAATTTTCAGTTTTTCTCTTGGAAATTTAGTCATAGGGTTTCTAAGTTCTAGTCTTAGCCATTTCTTACCATTCTTTTGATGAATGGTGGAGTGGAGGATGAAACACTTCCATTTTAACTAATATTTGAACAAAGAGCTAACACATTTCTAGCATAAAATTCAAGTTTCAAAACTGTTGGACTGTGGTATAAACTAGTTTGCACTTGCTATTTTAAGAACTCAGTTTGGTATGAACAGAAAAGTAAAATGTAAGTTTTTTTTTCCTGTCATTTAGAAAGAAACGTGTCACGGATTACGATAATGTTGCTCTGAGAGGAGCCTTTGGGAAATTATTGAGGTGGGCCATGAACATAATGCCATGAGTGGGGACCCAACATCATTTGATTTTCACTGTTCTTCATGTACAACTAAAATTATGAACATCTTAACTTTGCAGTGCAAGTGTTTTTGGAGTCTCAGCTGAATCAATGCAATGCTCTACTGATTCAAGAGGAAATAGCATACCAGTGATACTCTTGCTAATGCAGGACCGGTTGTACCGTCAAGGCGGTATTAAGGTACCGAAATTGTGGTTAATGGCGCATAGCTCGATATCTACTATGCTTGTGTTCTGTGTTTATGTATTTCTGGGGTGAATGTTTCTCTGGTTTTTGCTGCAGGCTGAAGGTATTTTTCGGATTAACCCCGAAAATAGCCAAGAGGAGGAAGTAAGGGACAAGTTGAACAGGGGAATTATCCCTGAAAACATTGATGTCCACTGCTTGGCTGGCCTAATCAAAGCTTGGTTTCGAGAGCTTCCGTCTGGAGTGCTCGACGGACTCTCTCCTGAGGAGGTTATGCAATGCAACACCGAAGAGGAGTCGGTCGAGCTTGTTAAGCAACTTAAGCCAACTGAGTCTGCCTTGCTGAATTGGGCTGTGGATCTTATGGCTGATGTTGTTGAGGAAGAGGATTCTAACAAAATGAATGCAAGGAATATTGCTATGGTTTTTGCTCCAAACATGACTCAGGTACTAGAAGCTAGTATGTCTTACATTATAAGTTCTCAACCAGAGAATCTTTTGTTCACTTGCGTGATGTTGTGTTCGACGTCGTTTTTTGATTCGTTAAAGCTGATGGATTTTGTTCTTTTCTTGGATAGATGTCTGATCCATTGACGGCTCTAATGCATGCTGTTCAAGTCATGAACCTACTCAAGACACTCATTATGAAAACATTACGAGAGAGGGAAGAAGCTGCTTCGGGAGGATATTCGCCCATGTCGTCTCGCTTTTCAGATCGACAAATGGATGAAGATTTTGATAGCCAGGAAGACATGGACACAGGCGACGAATCAAGAGGGCCAAACTCCGAGGCTGACAATGATGCCATTGATTACAATCAGAGCAGTGAAGAGGGAGATAGAGATGAGGGTTCACTAAGTGAGATAGAGGAATGCTTCCTAAGGAAACTGGGTGAAACCAAAGCTGAAACTAAAGGATCTTCAGCAAGACAGCAAGGTGATTCTGAAATAGATTCGAGTCCAAGAAGCTGCTCGGGATTTAACGTCGAGTCCAGTATATCGTTCACTGATAGTAAAAACGAAAACTCGTGCCTAAGTACTAGTGATGAAGAAGATTCCCGGACGAGTCTGCACGAAGAGGAGGGACAAAGCATTCATAGCGAAGTCATTCCACGTAACAACTTCATTGATGATATTCAGATGGATGACAAAATGAGGGAAGCAGTTCCATTGTCACCTGTCATCGTTTCATCTAACGAATTAGTCTAACAGCTCTCCATCGATGATGGCAACTAATACTTCGAGACATGTTTTCTTTTCAGTAGTGTTCAAAGTGATGCTTGCTTTTTTTGTATCATAGCATGGTGCTTAGCTTCCTAAAGTTTTCTTTGACCGTAAAAAGAGGATTGTTTGTGTGTTTTTTGTGATTCCTAAAGTTTAGCTTCGAGCTGAACGCGTATCATCTGTTTCTTT

mRNA sequence

GGCCGTTGAGAGACCTTTTTTTTTGAAAAGCGTTTTTAACTTCAAAGAACACAAATCCACAAATCCACTTCTTCAATGCAACAAATACAAACAAATCCACATTAAACCCACTTCCATTCAACAAACCCATCTCTCAATTTTTCAAAATCCCCCAAAAATCCTTCGAACAAAACCGACCCATTTTCCTCAGAGATCGAATCAGAATGACCGGCATTGTAATGGTGACAAGGGGCGGCGGCTGCGGCGGCGGAAAGCTCCTCAGAGGCGGCGGCGGCGGCGGAGGAAAAGGGTCGGTCGGCGATGACCAGAATCAGCTCTCTTTGGTGGATGTTATGTTGGCGGCTTTAAGGAAATCGATGGTTTATTGCCGTGTGGATCGTGGGGATGAGCTTATTTCAACTGTTCATCAGATGGAAATCGGATGGCCCACTAATGTTCTACATATTGCCCATGTCACTTTCGATCGATTCAATGGGTTTTTGGGGCTTCCGGTTGAGTTTGAGGTTGAGATTCCTAGCTCTGTTCCAAGTGCAAGTGCAAGTGTTTTTGGAGTCTCAGCTGAATCAATGCAATGCTCTACTGATTCAAGAGGAAATAGCATACCAGTGATACTCTTGCTAATGCAGGACCGGTTGTACCGTCAAGGCGGTATTAAGGCTGAAGGTATTTTTCGGATTAACCCCGAAAATAGCCAAGAGGAGGAAGTAAGGGACAAGTTGAACAGGGGAATTATCCCTGAAAACATTGATGTCCACTGCTTGGCTGGCCTAATCAAAGCTTGGTTTCGAGAGCTTCCGTCTGGAGTGCTCGACGGACTCTCTCCTGAGGAGGTTATGCAATGCAACACCGAAGAGGAGTCGGTCGAGCTTGTTAAGCAACTTAAGCCAACTGAGTCTGCCTTGCTGAATTGGGCTGTGGATCTTATGGCTGATGTTGTTGAGGAAGAGGATTCTAACAAAATGAATGCAAGGAATATTGCTATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCATTGACGGCTCTAATGCATGCTGTTCAAGTCATGAACCTACTCAAGACACTCATTATGAAAACATTACGAGAGAGGGAAGAAGCTGCTTCGGGAGGATATTCGCCCATGTCGTCTCGCTTTTCAGATCGACAAATGGATGAAGATTTTGATAGCCAGGAAGACATGGACACAGGCGACGAATCAAGAGGGCCAAACTCCGAGGCTGACAATGATGCCATTGATTACAATCAGAGCAGTGAAGAGGGAGATAGAGATGAGGGTTCACTAAGTGAGATAGAGGAATGCTTCCTAAGGAAACTGGGTGAAACCAAAGCTGAAACTAAAGGATCTTCAGCAAGACAGCAAGGTGATTCTGAAATAGATTCGAGTCCAAGAAGCTGCTCGGGATTTAACGTCGAGTCCAGTATATCGTTCACTGATAGTAAAAACGAAAACTCGTGCCTAAGTACTAGTGATGAAGAAGATTCCCGGACGAGTCTGCACGAAGAGGAGGGACAAAGCATTCATAGCGAAGTCATTCCACGTAACAACTTCATTGATGATATTCAGATGGATGACAAAATGAGGGAAGCAGTTCCATTGTCACCTGTCATCGTTTCATCTAACGAATTAGTCTAACAGCTCTCCATCGATGATGGCAACTAATACTTCGAGACATGTTTTCTTTTCAGTAGTGTTCAAAGTGATGCTTGCTTTTTTTGTATCATAGCATGGTGCTTAGCTTCCTAAAGTTTTCTTTGACCGTAAAAAGAGGATTGTTTGTGTGTTTTTTGTGATTCCTAAAGTTTAGCTTCGAGCTGAACGCGTATCATCTGTTTCTTT

Coding sequence (CDS)

ATGACCGGCATTGTAATGGTGACAAGGGGCGGCGGCTGCGGCGGCGGAAAGCTCCTCAGAGGCGGCGGCGGCGGCGGAGGAAAAGGGTCGGTCGGCGATGACCAGAATCAGCTCTCTTTGGTGGATGTTATGTTGGCGGCTTTAAGGAAATCGATGGTTTATTGCCGTGTGGATCGTGGGGATGAGCTTATTTCAACTGTTCATCAGATGGAAATCGGATGGCCCACTAATGTTCTACATATTGCCCATGTCACTTTCGATCGATTCAATGGGTTTTTGGGGCTTCCGGTTGAGTTTGAGGTTGAGATTCCTAGCTCTGTTCCAAGTGCAAGTGCAAGTGTTTTTGGAGTCTCAGCTGAATCAATGCAATGCTCTACTGATTCAAGAGGAAATAGCATACCAGTGATACTCTTGCTAATGCAGGACCGGTTGTACCGTCAAGGCGGTATTAAGGCTGAAGGTATTTTTCGGATTAACCCCGAAAATAGCCAAGAGGAGGAAGTAAGGGACAAGTTGAACAGGGGAATTATCCCTGAAAACATTGATGTCCACTGCTTGGCTGGCCTAATCAAAGCTTGGTTTCGAGAGCTTCCGTCTGGAGTGCTCGACGGACTCTCTCCTGAGGAGGTTATGCAATGCAACACCGAAGAGGAGTCGGTCGAGCTTGTTAAGCAACTTAAGCCAACTGAGTCTGCCTTGCTGAATTGGGCTGTGGATCTTATGGCTGATGTTGTTGAGGAAGAGGATTCTAACAAAATGAATGCAAGGAATATTGCTATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCATTGACGGCTCTAATGCATGCTGTTCAAGTCATGAACCTACTCAAGACACTCATTATGAAAACATTACGAGAGAGGGAAGAAGCTGCTTCGGGAGGATATTCGCCCATGTCGTCTCGCTTTTCAGATCGACAAATGGATGAAGATTTTGATAGCCAGGAAGACATGGACACAGGCGACGAATCAAGAGGGCCAAACTCCGAGGCTGACAATGATGCCATTGATTACAATCAGAGCAGTGAAGAGGGAGATAGAGATGAGGGTTCACTAAGTGAGATAGAGGAATGCTTCCTAAGGAAACTGGGTGAAACCAAAGCTGAAACTAAAGGATCTTCAGCAAGACAGCAAGGTGATTCTGAAATAGATTCGAGTCCAAGAAGCTGCTCGGGATTTAACGTCGAGTCCAGTATATCGTTCACTGATAGTAAAAACGAAAACTCGTGCCTAAGTACTAGTGATGAAGAAGATTCCCGGACGAGTCTGCACGAAGAGGAGGGACAAAGCATTCATAGCGAAGTCATTCCACGTAACAACTTCATTGATGATATTCAGATGGATGACAAAATGAGGGAAGCAGTTCCATTGTCACCTGTCATCGTTTCATCTAACGAATTAGTCTAA

Protein sequence

MTGIVMVTRGGGCGGGKLLRGGGGGGGKGSVGDDQNQLSLVDVMLAALRKSMVYCRVDRGDELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSAESMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGIIPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNWAVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREEAASGGYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEGDRDEGSLSEIEECFLRKLGETKAETKGSSARQQGDSEIDSSPRSCSGFNVESSISFTDSKNENSCLSTSDEEDSRTSLHEEEGQSIHSEVIPRNNFIDDIQMDDKMREAVPLSPVIVSSNELV

Homology

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BLAST of Sed0012448 vs. NCBI nr
Match: XP_038897013.1 (rho GTPase-activating protein 2 [Benincasa hispida])

HSP 1 Score: 764.6 bits (1973), Expect = 5.0e-217
Identity = 411/481 (85.45%), Postives = 441/481 (91.68%), Query Frame = 0


Query: 1   MTGIVMVTRGGGCGGG-KLLRGGGGGGGKGSVGDDQNQLSLVDVMLAALRKSMVYCRVDR 60
           MTGIVMVTRGGGCGGG K+++  GGGG K SV DDQNQLS+V V+L ALRKSMVYCRVDR
Sbjct: 1   MTGIVMVTRGGGCGGGSKMVK--GGGGAKASVTDDQNQLSVVHVLLTALRKSMVYCRVDR 60

Query: 61  GDELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSA 120
            ++LISTVHQMEIGWPTNV HIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSA
Sbjct: 61  REDLISTVHQMEIGWPTNVRHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSA 120

Query: 121 ESMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGIIPE 180
           ESMQCSTDSRGNS+P ILLLMQDRLYRQGG+KAEGIFRINPENSQEE+VRDKLNRGIIPE
Sbjct: 121 ESMQCSTDSRGNSVPTILLLMQDRLYRQGGLKAEGIFRINPENSQEEQVRDKLNRGIIPE 180

Query: 181 NIDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNWAVD 240
           NIDVHCLAGLIKAWFRELPSGVLDGLSPEEV+QCNTEEESVELVKQLKPTE+ALL+WAVD
Sbjct: 181 NIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLQCNTEEESVELVKQLKPTEAALLSWAVD 240

Query: 241 LMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREE 300
           LMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREE
Sbjct: 241 LMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREE 300

Query: 301 AASGGYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEGDRDEG 360
           AASGGYSPMSS  SD+QM+EDFDSQ+DMDTGDESRGPNS+ +ND  DYN SSE+GD DEG
Sbjct: 301 AASGGYSPMSSHSSDQQMNEDFDSQDDMDTGDESRGPNSDVENDVNDYNHSSEDGDEDEG 360

Query: 361 SLSEIEECFLRKLGETKAETKGSSARQQGDSEIDSSPRSCSGFNVESSISFTDSKNENSC 420
           SLSEIEECFLR+L ETK+E+  SSA Q+GD +ID  PRSCS FN ESSISFTDSKNENSC
Sbjct: 361 SLSEIEECFLRQLDETKSESCRSSAGQEGDLDIDLCPRSCSRFNTESSISFTDSKNENSC 420

Query: 421 L-STSDEEDSRTSLHEEEGQSIHSEVIP--RNNFIDDIQMDDKMREAVPLSPVIVSSNEL 478
           L STSD EDSRTSLHE+EGQSIH EV+P    NFI DIQMDDKMRE V  + ++V+SNE 
Sbjct: 421 LSSTSDGEDSRTSLHEDEGQSIHKEVLPIACKNFI-DIQMDDKMREPVSSTSMVVASNES 478

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BLAST of Sed0012448 vs. NCBI nr
Match: XP_008451421.1 (PREDICTED: rho GTPase-activating protein 2 [Cucumis melo] >KAA0057546.1 rho GTPase-activating protein 2 [Cucumis melo var. makuwa] >TYK18267.1 rho GTPase-activating protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 762.7 bits (1968), Expect = 1.9e-216
Identity = 411/487 (84.39%), Postives = 442/487 (90.76%), Query Frame = 0


Query: 1   MTGIVMVTRGGGCGGG----KLLRGGGGGGGKGSVGDDQNQLSLVDVMLAALRKSMVYCR 60
           MTGIVMVTRGGGCGGG    K+++   GGG KGSV DDQNQLS+VDV+L ALRKSMVYCR
Sbjct: 1   MTGIVMVTRGGGCGGGGGANKMVK--SGGGAKGSVTDDQNQLSVVDVLLTALRKSMVYCR 60

Query: 61  VDRGDELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFG 120
           VDR ++LISTVHQMEIGWPTNV HIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFG
Sbjct: 61  VDRREDLISTVHQMEIGWPTNVRHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFG 120

Query: 121 VSAESMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGI 180
           VSAESMQCSTDSRGNS+P ILLLMQDRLYRQGG+KAEGIFRINPENSQEE+VRDKLNRGI
Sbjct: 121 VSAESMQCSTDSRGNSVPTILLLMQDRLYRQGGLKAEGIFRINPENSQEEQVRDKLNRGI 180

Query: 181 IPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNW 240
           IPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEV+QCNTEEESVELVKQLKPTE+ALL W
Sbjct: 181 IPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLQCNTEEESVELVKQLKPTEAALLGW 240

Query: 241 AVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLRE 300
           AVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLRE
Sbjct: 241 AVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLRE 300

Query: 301 REEAASGGYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEG-- 360
           REEA+SGGYSPMSS  SDRQM EDFDSQEDMDTGDESRGPNS+ +ND  DYNQSSE+G  
Sbjct: 301 REEASSGGYSPMSSHSSDRQMHEDFDSQEDMDTGDESRGPNSDVENDVDDYNQSSEDGDE 360

Query: 361 DRDEGSLSEIEECFLRKLGETKAETKGSSARQQGDSEIDSSPRSCSGFNVESSISFTDSK 420
           D DEGSLSEIE+CFLR+L ETK+E+  SS RQ+ D +++ SPRSCSGFNVESSISFTDSK
Sbjct: 361 DEDEGSLSEIEDCFLRQLNETKSESCRSSTRQEADLDMELSPRSCSGFNVESSISFTDSK 420

Query: 421 NENSCLS--TSDEEDSRTSLHEEEGQSIHSEVIPR--NNFIDDIQMDDKMREAVPLSPVI 478
           NENSCLS  TSD +DSRTSLHE+EGQSIH EV+P    NFI DIQ+DDKMRE V  + ++
Sbjct: 421 NENSCLSSTTSDGDDSRTSLHEDEGQSIHKEVLPMACKNFI-DIQIDDKMREPVSSTSMV 480

[Close]

BLAST of Sed0012448 vs. NCBI nr
Match: XP_004148879.1 (rho GTPase-activating protein 2 [Cucumis sativus] >KGN45394.2 hypothetical protein Csa_015623 [Cucumis sativus])

HSP 1 Score: 750.4 bits (1936), Expect = 9.8e-213
Identity = 402/484 (83.06%), Postives = 438/484 (90.50%), Query Frame = 0


Query: 1   MTGIVMVTRGGGCGGG----KLLRGGGGGGGKGSVGDDQNQLSLVDVMLAALRKSMVYCR 60
           MTGIVMVTRGGGCGGG    K+++   GGG KGSV DDQNQ+S+VDV+L ALRKSMVYCR
Sbjct: 1   MTGIVMVTRGGGCGGGGGANKMVK--SGGGAKGSVTDDQNQISVVDVLLTALRKSMVYCR 60

Query: 61  VDRGDELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFG 120
           VDR ++LISTVH MEIGWPTNV HIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASA+VFG
Sbjct: 61  VDRREDLISTVHHMEIGWPTNVRHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASANVFG 120

Query: 121 VSAESMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGI 180
           VSAESMQCSTDSRGNS+P ILLLMQDRLYRQGG+KAEGIFRINPENSQEE+VRDKLNRGI
Sbjct: 121 VSAESMQCSTDSRGNSVPTILLLMQDRLYRQGGLKAEGIFRINPENSQEEKVRDKLNRGI 180

Query: 181 IPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNW 240
           IPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEV+QCNTEEESVELVKQLKPTE+ALL W
Sbjct: 181 IPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLQCNTEEESVELVKQLKPTEAALLGW 240

Query: 241 AVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLRE 300
           AVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLRE
Sbjct: 241 AVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLRE 300

Query: 301 REEAASGGYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEGDR 360
           REEA+SGGYSPMSS  SDRQM EDFDSQEDMDT DESRGPNS+ +ND  DYN SSE+GD 
Sbjct: 301 REEASSGGYSPMSSHSSDRQMHEDFDSQEDMDTADESRGPNSDVENDVDDYNHSSEDGDE 360

Query: 361 DEGSLSEIEECFLRKLGETKAETKGSSARQQGDSEIDSSPRSCSGFNVESSISFTDSKNE 420
           +EGSLSEIE+CFLR+L ETK+E+  SS RQ+GD +++ SPRSCSGFNVESSI+FTDSKNE
Sbjct: 361 EEGSLSEIEDCFLRQLNETKSESCRSSTRQEGDLDMELSPRSCSGFNVESSITFTDSKNE 420

Query: 421 NSCLS--TSDEEDSRTSLHEEEGQSIHSE-VIPRNNFIDDIQMDDKMREAVPLSPVIVSS 478
           NSCLS  +SD EDSRTSLHE+EGQSIH E  +   NFI DIQ+DDKMRE V  + ++V+S
Sbjct: 421 NSCLSSTSSDGEDSRTSLHEDEGQSIHKEDPMACKNFI-DIQIDDKMREPVSSTSMVVAS 480

[Close]

BLAST of Sed0012448 vs. NCBI nr
Match: XP_022150274.1 (rho GTPase-activating protein 2 [Momordica charantia])

HSP 1 Score: 749.2 bits (1933), Expect = 2.2e-212
Identity = 403/481 (83.78%), Postives = 433/481 (90.02%), Query Frame = 0


Query: 1   MTGIVMVTRGGGCGGGKLLRGGGGGGGKGSVGDDQNQLSLVDVMLAALRKSMVYCRVDRG 60
           MTGIVMVTRGGGCGGGK+L+     G KGSVG+DQNQLSLVDV+L ALRKSMVYCRVDR 
Sbjct: 1   MTGIVMVTRGGGCGGGKILK-----GTKGSVGEDQNQLSLVDVLLTALRKSMVYCRVDRR 60

Query: 61  DELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSAE 120
           ++LIS VH MEIGWPTNV HIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSAE
Sbjct: 61  EDLISAVHPMEIGWPTNVRHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSAE 120

Query: 121 SMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGIIPEN 180
           SMQCSTDSRGNS+P+ILLLMQDRLYRQGG+KAEGIFRINPENSQEE+VRDKLNRGIIPEN
Sbjct: 121 SMQCSTDSRGNSVPMILLLMQDRLYRQGGLKAEGIFRINPENSQEEQVRDKLNRGIIPEN 180

Query: 181 IDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNWAVDL 240
           IDVHCLAGLIKAWFRELPSGVLDGLSPE+V+QCNTEEESVELVKQLKPTE++LLNWAVDL
Sbjct: 181 IDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTEASLLNWAVDL 240

Query: 241 MADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREEA 300
           MADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREEA
Sbjct: 241 MADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREEA 300

Query: 301 ASGGYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEGDRD--E 360
           ASGGYSPMSS  SD+QMDEDFDSQEDMDTGDESRGPNS+ + D I +N  SE+G+ +  E
Sbjct: 301 ASGGYSPMSSHSSDQQMDEDFDSQEDMDTGDESRGPNSDGEIDVIHFNHGSEDGEEEENE 360

Query: 361 GSLSEIEECFLRKLGETKAETKGSSARQQGDSEIDSSPRSCSGFNVESSISFTDSKNENS 420
           GSLSEIEECFLR+L ETK+ET   SARQ GD +IDSSPRSCSGFNVESS+SFTDSKN NS
Sbjct: 361 GSLSEIEECFLRQLNETKSET-CRSARQGGDLQIDSSPRSCSGFNVESSLSFTDSKNGNS 420

Query: 421 CLSTSDEEDSRTSLHEEEGQSIHSEVIP--RNNFIDDIQMDDKMREAVPLSPVIVSSNEL 478
           CLS+SD EDS TSLHE+E Q IH +V P   NN   DIQMDDKMRE V   P++V S E 
Sbjct: 421 CLSSSDGEDSGTSLHEDEEQRIHKDVHPIACNNSSIDIQMDDKMREPVLSMPMVVVSEES 475

[Close]

BLAST of Sed0012448 vs. NCBI nr
Match: XP_023548475.1 (rho GTPase-activating protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 745.3 bits (1923), Expect = 3.2e-211
Identity = 402/481 (83.58%), Postives = 435/481 (90.44%), Query Frame = 0


Query: 1   MTGIVMVTRGGGCGGG-KLLRGGGGGGGKGSVGDDQNQLSLVDVMLAALRKSMVYCRVDR 60
           MTGIVMVTRGGGCGGG K+++GG  G    SV DDQNQLSLVDV+L ALRKSMVYCRVDR
Sbjct: 1   MTGIVMVTRGGGCGGGSKMVKGGAKG---SSVSDDQNQLSLVDVLLTALRKSMVYCRVDR 60

Query: 61  GDELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSA 120
            +ELISTVHQMEIGWPTNV HIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSA
Sbjct: 61  REELISTVHQMEIGWPTNVRHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSA 120

Query: 121 ESMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGIIPE 180
           ESMQCSTDSRGNS+P ILLLMQDRLYRQGG+KAEGIFRINPENSQEE+VRDKLNRGIIP+
Sbjct: 121 ESMQCSTDSRGNSVPKILLLMQDRLYRQGGLKAEGIFRINPENSQEEQVRDKLNRGIIPQ 180

Query: 181 NIDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNWAVD 240
           NIDVHCLAGLIKAWFRELPSGVLDGLSPEEV+QCNTEEESVELVK+LKPTE+ALL+WAVD
Sbjct: 181 NIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLQCNTEEESVELVKKLKPTEAALLSWAVD 240

Query: 241 LMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREE 300
           LMADVVEEED NKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREE
Sbjct: 241 LMADVVEEEDCNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREE 300

Query: 301 AASGGYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEGDRDEG 360
           A S GYSPMSSR SDRQMDEDF+SQEDMDTGDES GPNS+ +ND       +E+GD DEG
Sbjct: 301 AVSDGYSPMSSRSSDRQMDEDFNSQEDMDTGDESGGPNSDVENDV------NEDGDEDEG 360

Query: 361 SLSEIEECFLRKLGETKAETKGSSARQQGDSEIDSSPRSCSGFNVESSISFTDSKNENSC 420
           SLSEIE+CFLRKL +TK+ET+ SSAR++GD ++D SPRSCSG NVESSISFTDSKNENSC
Sbjct: 361 SLSEIEDCFLRKLDDTKSETRRSSARREGDLDVDLSPRSCSGLNVESSISFTDSKNENSC 420

Query: 421 L-STSDEEDSRTSLHEEEGQSIHSEVIP--RNNFIDDIQMDDKMREAVPLSPVIVSSNEL 478
           L STSD EDS TSLHEEEGQSIH E++P    NFI DI MDDKMRE   L+ ++V+SN+ 
Sbjct: 421 LSSTSDGEDSTTSLHEEEGQSIHKELVPIACKNFI-DIHMDDKMREPASLTSMVVASNDS 471

[Close]

BLAST of Sed0012448 vs. ExPASy Swiss-Prot
Match: F4JI46 (Rho GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP2 PE=1 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 2.2e-135
Identity = 283/449 (63.03%), Postives = 330/449 (73.50%), Query Frame = 0


Query: 1   MTGIVMVTRGGGCGGGKLLRGGGGGGGKGSVGDD------QNQLSLVDVMLAALRKSMVY 60
           MTG+VM+T+GGGCGG     GG GG  K +  ++      Q QLSLV+ +L ALRKS+V 
Sbjct: 1   MTGLVMMTKGGGCGG-----GGKGGRRKSTAEEEEEEEQNQQQLSLVEFLLTALRKSVVS 60

Query: 61  CRVDR-------GDELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSV 120
           CRVD        G  + S VH MEIGWPTNV HI HVTFDRF+GFLGLP E +VEIP  V
Sbjct: 61  CRVDNRQDDGGVGGGISSAVHHMEIGWPTNVRHITHVTFDRFHGFLGLPHELQVEIPCRV 120

Query: 121 PSASASVFGVSAESMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEE 180
           PSAS SVFGVSAESMQCS D +GNS+P ILLLMQ+RLY Q G+KAEGIFRINPENSQEE 
Sbjct: 121 PSASVSVFGVSAESMQCSYDEKGNSVPTILLLMQERLYSQQGLKAEGIFRINPENSQEEH 180

Query: 181 VRDKLNRGIIPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLK 240
           VRD+LNRGI+PENIDVHCLAGLIKAWFRELPSGVLDGLSPEEV+ CNTE+ESVEL+KQLK
Sbjct: 181 VRDQLNRGIVPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLNCNTEDESVELIKQLK 240

Query: 241 PTESALLNWAVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLK 300
           PTESALLNWAVDLMADVVEEE+SNKMNARNIAMVFAPNMTQM+DPLTALMHAVQVMNLLK
Sbjct: 241 PTESALLNWAVDLMADVVEEEESNKMNARNIAMVFAPNMTQMTDPLTALMHAVQVMNLLK 300

Query: 301 TLIMKTLREREEAASG--GYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPNSEA----D 360
           TLI KTL EREE A+G  GYSP  S  S+ Q D D D+ +DM+   ES+  +SE     +
Sbjct: 301 TLITKTLAEREENATGSEGYSP--SHSSNSQTDSDSDNAQDMEVSCESQATDSECGEEEE 360

Query: 361 NDAIDYNQ------SSEEGDRDEGSLSEIEECFLRKLGETKAETKGSSARQQGDSEIDSS 420
            + ++ +Q      S+ E + D GSL  IE+CFL +L    A    +S  +      D S
Sbjct: 361 VEEVEQHQEHLSRHSTHEDETDIGSLCSIEKCFLNQLNNNAARVSNTSISE------DWS 420

Query: 421 PRSCSGFNVESSISFTDSKNENSCLSTSD 425
           P++         +SFT++K+     STSD
Sbjct: 421 PKAF------PLVSFTENKSNTLSSSTSD 430

[Close]

BLAST of Sed0012448 vs. ExPASy Swiss-Prot
Match: Q9FMR1 (Rho GTPase-activating protein 1 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP1 PE=2 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.4e-100
Identity = 210/355 (59.15%), Postives = 259/355 (72.96%), Query Frame = 0


Query: 20  RGGGGGGGKGSVGDDQNQLSLVDVMLAALRKSMVYCRVDRGDELISTVHQMEIGWPTNVL 79
           R    GG +   G+D  Q+SL+ +++A  R+S++ C+ +R  EL S    MEIGWPTNV 
Sbjct: 72  RSSTDGGEEDDGGED--QISLLALLVAIFRRSLISCKSNR-RELCS----MEIGWPTNVR 131

Query: 80  HIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSAESMQCSTDSRGNSIPVILLL 139
           H+AHVTFDRFNGFLGLPVEFE E+P   PSASA+VFGVS ESMQ S DSRGN +P ILLL
Sbjct: 132 HVAHVTFDRFNGFLGLPVEFEPEVPRRAPSASATVFGVSTESMQLSYDSRGNCVPTILLL 191

Query: 140 MQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGIIPENIDVHCLAGLIKAWFRELPS 199
           MQ+ LY QGG++AEGIFR+  ENS+EE VR++LNRG IPE IDVHCLAGLIKAWFRELP+
Sbjct: 192 MQNCLYSQGGLQAEGIFRLTAENSEEEAVREQLNRGFIPERIDVHCLAGLIKAWFRELPT 251

Query: 200 GVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNWAVDLMADVVEEEDSNKMNARNIA 259
            VLD LSPE+VMQC TEEE+VELV+ L PTE+ALL+WA++LMADVV+ E  NKMN+RNIA
Sbjct: 252 SVLDSLSPEQVMQCQTEEENVELVRLLPPTEAALLDWAINLMADVVQYEHLNKMNSRNIA 311

Query: 260 MVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREEAA--------------SGGY 319
           MVFAPNMTQM DPLTALM+AVQVMN LKTLI KTLRER+++               SG  
Sbjct: 312 MVFAPNMTQMDDPLTALMYAVQVMNFLKTLIEKTLRERQDSVVEQAHAFPLEPSDESGHQ 371

Query: 320 SPMSS-RFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEGDRDEG 360
           SP  S  F+  +  E  ++Q D     E++  +SE  ++    N + E+ + D G
Sbjct: 372 SPSQSLAFNTSEQSE--ETQSDNIENAENQSSSSEISDELTLENNACEQRETDFG 417

[Close]

BLAST of Sed0012448 vs. ExPASy Swiss-Prot
Match: Q8GYY5 (Rho GTPase-activating protein 3 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP3 PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.6e-96
Identity = 208/389 (53.47%), Postives = 262/389 (67.35%), Query Frame = 0


Query: 25  GGGKGSVGDDQNQLSLVDVMLAALRKSMVY-CRVDRGDELISTVHQMEIGWPTNVLHIAH 84
           G G GS      QL++VD++ A LRKS+V  C ++RG++    V  M+IGWPT V H++H
Sbjct: 64  GNGSGS-----GQLTVVDLLAAVLRKSLVMSCAMERGED--DVVASMDIGWPTEVKHVSH 123

Query: 85  VTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSAESMQCSTDSRGNSIPVILLLMQDR 144
           VTFDRFNGFLGLP E E E+P   PSAS SVFGVSA+SMQCS D RGNS+P ILL MQ R
Sbjct: 124 VTFDRFNGFLGLPSELEPEVPPRAPSASVSVFGVSAKSMQCSYDDRGNSVPTILLRMQKR 183

Query: 145 LYRQGGIKAEGIFRINPENSQEEEVRDKLNRGIIPENIDVHCLAGLIKAWFRELPSGVLD 204
           LY +GG+KAEGIFRINP+N +EE VR +LN G++P  IDVHCLAGLIKAWFRELP+GVLD
Sbjct: 184 LYTEGGLKAEGIFRINPDNGKEEHVRRQLNCGVVPRGIDVHCLAGLIKAWFRELPTGVLD 243

Query: 205 GLSPEEVMQCNTEEESVELVKQLKPTESALLNWAVDLMADVVEEEDSNKMNARNIAMVFA 264
            L+PE+VM+CNTEE+   LV  L P ESA+L+WA+ LMADVVE E  NKMNARN+AMVFA
Sbjct: 244 VLTPEQVMRCNTEEDCSRLVILLPPVESAILDWAIGLMADVVEHEQFNKMNARNVAMVFA 303

Query: 265 PNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREEAASGGYSPMSSRFSDRQM---DED 324
           PNMTQM+DPLTAL+HAVQVMN LKTLI+  L+ERE A +       +R+  +Q     E+
Sbjct: 304 PNMTQMADPLTALIHAVQVMNFLKTLILMNLKERENADA------KARWLKKQTSDPSEE 363

Query: 325 FDSQEDMDTGDESRGPNS------------EADNDAIDYN---QSSEEGDRD----EGSL 384
           ++SQ       E    N+            EADN+   +N   ++  EG  D     G++
Sbjct: 364 WESQHSEILSPEKPNNNNPKFLRVATLCRLEADNEEEFWNIKKRNDHEGVLDTSSGNGNI 423

Query: 385 SEIEECFLRKLGETKAETKGS--SARQQG 389
             ++      L +    TK +  S R +G
Sbjct: 424 GPVQRLCKHPLFQLSKSTKKAFVSNRDEG 439

[Close]

BLAST of Sed0012448 vs. ExPASy Swiss-Prot
Match: Q9CAX8 (Rho GTPase-activating protein 4 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP4 PE=2 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.5e-91
Identity = 189/333 (56.76%), Postives = 242/333 (72.67%), Query Frame = 0


Query: 39  SLVDVMLAALRKSMVYCRVDRGDELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVE 98
           S ++++++A+R+S++   V   D     +  MEIG PT+V H+AHVTFDRF+GFLGLPVE
Sbjct: 65  SALEILVSAIRRSVIGGCVGEED-----LCSMEIGVPTDVRHVAHVTFDRFHGFLGLPVE 124

Query: 99  FEVEIPSSVPSASASVFGVSAESMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRI 158
           FE E+P   PSASA+VFGVS ESMQ S D+RGN +P ILL+MQ  LY +GG++ EGIFRI
Sbjct: 125 FEPEVPRRAPSASATVFGVSTESMQLSYDTRGNIVPTILLMMQSHLYSRGGLRVEGIFRI 184

Query: 159 NPENSQEEEVRDKLNRGIIPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEE 218
           N EN QEE +R++LN+GIIP+NIDVHCLA LIKAWFRELPSGVLD LSPE+VM+  +E+E
Sbjct: 185 NGENGQEEYIREELNKGIIPDNIDVHCLASLIKAWFRELPSGVLDSLSPEQVMESESEDE 244

Query: 219 SVELVKQLKPTESALLNWAVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMH 278
            VELV+ L  TE++LL+WA++LMADVVE E  NKMNARNIAMVFAPNMTQM DPLTALM+
Sbjct: 245 CVELVRLLPSTEASLLDWAINLMADVVEMEQLNKMNARNIAMVFAPNMTQMLDPLTALMY 304

Query: 279 AVQVMNLLKTLIMKTLREREEAASGGYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPN- 338
           AVQVMN LKTLI+KTL++R+E+             D+ +     S  D   GD+S     
Sbjct: 305 AVQVMNFLKTLIVKTLKDRKES------------RDKLVPASNPSPRD-HNGDQSSSRQL 364

Query: 339 ---SEADNDAIDYNQSSEEGDRDEGSLSEIEEC 368
               +A+ +    N  +E  D++E +  E EEC
Sbjct: 365 LHLMKANKEETLDNFEAEMKDKEESADEEEEEC 379

[Close]

BLAST of Sed0012448 vs. ExPASy Swiss-Prot
Match: Q6NKT5 (Rho GTPase-activating protein 5 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP5 PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 4.1e-89
Identity = 187/334 (55.99%), Postives = 241/334 (72.16%), Query Frame = 0


Query: 70  MEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSAESMQCSTDSR 129
           M+IG PTN+ H+AHVTFDRF+GFLGLP EFE ++P   PSASA+VFGVS ESMQ S DSR
Sbjct: 1   MDIGGPTNIRHVAHVTFDRFDGFLGLPSEFEPDVPRKAPSASATVFGVSTESMQLSYDSR 60

Query: 130 GNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGIIPENIDVHCLAGL 189
           GN +PVILLL+Q RLY QGG++AEG+FRI  ENS+EE VR++LN+GIIP+ IDVHCLAGL
Sbjct: 61  GNCVPVILLLLQSRLYDQGGLQAEGVFRITGENSEEEFVREQLNKGIIPDGIDVHCLAGL 120

Query: 190 IKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNWAVDLMADVVEEED 249
           IKAWFRELP GVLD L  E+VMQC ++E+ V++V+ L  TE++LLNWA++LMADV++ E 
Sbjct: 121 IKAWFRELPRGVLDPLPSEQVMQCESDEDFVKVVRLLPQTEASLLNWAINLMADVIQFEH 180

Query: 250 SNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREEAASGGYSPMS 309
            NKMN+RN+A+VFAPNM+QM+DPLTALM+AVQVM LLK+L  KT+RERE ++S      S
Sbjct: 181 VNKMNSRNLALVFAPNMSQMADPLTALMYAVQVMKLLKSLTEKTVREREASSSVVDRRCS 240

Query: 310 SRFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEGDR----DEGSLSEIE 369
               D + ++D + +E+ +  +E      E D D        EEGD      E   SEI 
Sbjct: 241 KEAEDGEKEKDNEEEEEDEEEEE-----EEEDED----EDEEEEGDGVYIIKEEEASEII 300

Query: 370 ECFL--RKLGETKAETKGSSAR-QQGDSEIDSSP 397
           +      K G  K+E +GSSA   +GD+ +   P
Sbjct: 301 KVVADEHKSGSIKSEFEGSSATDSKGDNGVVQPP 325

[Close]

BLAST of Sed0012448 vs. ExPASy TrEMBL
Match: A0A5D3D3Z7 (Rho GTPase-activating protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002090 PE=4 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 9.2e-217
Identity = 411/487 (84.39%), Postives = 442/487 (90.76%), Query Frame = 0


Query: 1   MTGIVMVTRGGGCGGG----KLLRGGGGGGGKGSVGDDQNQLSLVDVMLAALRKSMVYCR 60
           MTGIVMVTRGGGCGGG    K+++   GGG KGSV DDQNQLS+VDV+L ALRKSMVYCR
Sbjct: 1   MTGIVMVTRGGGCGGGGGANKMVK--SGGGAKGSVTDDQNQLSVVDVLLTALRKSMVYCR 60

Query: 61  VDRGDELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFG 120
           VDR ++LISTVHQMEIGWPTNV HIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFG
Sbjct: 61  VDRREDLISTVHQMEIGWPTNVRHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFG 120

Query: 121 VSAESMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGI 180
           VSAESMQCSTDSRGNS+P ILLLMQDRLYRQGG+KAEGIFRINPENSQEE+VRDKLNRGI
Sbjct: 121 VSAESMQCSTDSRGNSVPTILLLMQDRLYRQGGLKAEGIFRINPENSQEEQVRDKLNRGI 180

Query: 181 IPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNW 240
           IPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEV+QCNTEEESVELVKQLKPTE+ALL W
Sbjct: 181 IPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLQCNTEEESVELVKQLKPTEAALLGW 240

Query: 241 AVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLRE 300
           AVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLRE
Sbjct: 241 AVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLRE 300

Query: 301 REEAASGGYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEG-- 360
           REEA+SGGYSPMSS  SDRQM EDFDSQEDMDTGDESRGPNS+ +ND  DYNQSSE+G  
Sbjct: 301 REEASSGGYSPMSSHSSDRQMHEDFDSQEDMDTGDESRGPNSDVENDVDDYNQSSEDGDE 360

Query: 361 DRDEGSLSEIEECFLRKLGETKAETKGSSARQQGDSEIDSSPRSCSGFNVESSISFTDSK 420
           D DEGSLSEIE+CFLR+L ETK+E+  SS RQ+ D +++ SPRSCSGFNVESSISFTDSK
Sbjct: 361 DEDEGSLSEIEDCFLRQLNETKSESCRSSTRQEADLDMELSPRSCSGFNVESSISFTDSK 420

Query: 421 NENSCLS--TSDEEDSRTSLHEEEGQSIHSEVIPR--NNFIDDIQMDDKMREAVPLSPVI 478
           NENSCLS  TSD +DSRTSLHE+EGQSIH EV+P    NFI DIQ+DDKMRE V  + ++
Sbjct: 421 NENSCLSSTTSDGDDSRTSLHEDEGQSIHKEVLPMACKNFI-DIQIDDKMREPVSSTSMV 480

[Close]

BLAST of Sed0012448 vs. ExPASy TrEMBL
Match: A0A1S3BQV1 (rho GTPase-activating protein 2 OS=Cucumis melo OX=3656 GN=LOC103492720 PE=4 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 9.2e-217
Identity = 411/487 (84.39%), Postives = 442/487 (90.76%), Query Frame = 0


Query: 1   MTGIVMVTRGGGCGGG----KLLRGGGGGGGKGSVGDDQNQLSLVDVMLAALRKSMVYCR 60
           MTGIVMVTRGGGCGGG    K+++   GGG KGSV DDQNQLS+VDV+L ALRKSMVYCR
Sbjct: 1   MTGIVMVTRGGGCGGGGGANKMVK--SGGGAKGSVTDDQNQLSVVDVLLTALRKSMVYCR 60

Query: 61  VDRGDELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFG 120
           VDR ++LISTVHQMEIGWPTNV HIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFG
Sbjct: 61  VDRREDLISTVHQMEIGWPTNVRHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFG 120

Query: 121 VSAESMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGI 180
           VSAESMQCSTDSRGNS+P ILLLMQDRLYRQGG+KAEGIFRINPENSQEE+VRDKLNRGI
Sbjct: 121 VSAESMQCSTDSRGNSVPTILLLMQDRLYRQGGLKAEGIFRINPENSQEEQVRDKLNRGI 180

Query: 181 IPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNW 240
           IPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEV+QCNTEEESVELVKQLKPTE+ALL W
Sbjct: 181 IPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLQCNTEEESVELVKQLKPTEAALLGW 240

Query: 241 AVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLRE 300
           AVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLRE
Sbjct: 241 AVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLRE 300

Query: 301 REEAASGGYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEG-- 360
           REEA+SGGYSPMSS  SDRQM EDFDSQEDMDTGDESRGPNS+ +ND  DYNQSSE+G  
Sbjct: 301 REEASSGGYSPMSSHSSDRQMHEDFDSQEDMDTGDESRGPNSDVENDVDDYNQSSEDGDE 360

Query: 361 DRDEGSLSEIEECFLRKLGETKAETKGSSARQQGDSEIDSSPRSCSGFNVESSISFTDSK 420
           D DEGSLSEIE+CFLR+L ETK+E+  SS RQ+ D +++ SPRSCSGFNVESSISFTDSK
Sbjct: 361 DEDEGSLSEIEDCFLRQLNETKSESCRSSTRQEADLDMELSPRSCSGFNVESSISFTDSK 420

Query: 421 NENSCLS--TSDEEDSRTSLHEEEGQSIHSEVIPR--NNFIDDIQMDDKMREAVPLSPVI 478
           NENSCLS  TSD +DSRTSLHE+EGQSIH EV+P    NFI DIQ+DDKMRE V  + ++
Sbjct: 421 NENSCLSSTTSDGDDSRTSLHEDEGQSIHKEVLPMACKNFI-DIQIDDKMREPVSSTSMV 480

[Close]

BLAST of Sed0012448 vs. ExPASy TrEMBL
Match: A0A6J1D9I6 (rho GTPase-activating protein 2 OS=Momordica charantia OX=3673 GN=LOC111018480 PE=4 SV=1)

HSP 1 Score: 749.2 bits (1933), Expect = 1.1e-212
Identity = 403/481 (83.78%), Postives = 433/481 (90.02%), Query Frame = 0


Query: 1   MTGIVMVTRGGGCGGGKLLRGGGGGGGKGSVGDDQNQLSLVDVMLAALRKSMVYCRVDRG 60
           MTGIVMVTRGGGCGGGK+L+     G KGSVG+DQNQLSLVDV+L ALRKSMVYCRVDR 
Sbjct: 1   MTGIVMVTRGGGCGGGKILK-----GTKGSVGEDQNQLSLVDVLLTALRKSMVYCRVDRR 60

Query: 61  DELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSAE 120
           ++LIS VH MEIGWPTNV HIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSAE
Sbjct: 61  EDLISAVHPMEIGWPTNVRHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSAE 120

Query: 121 SMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGIIPEN 180
           SMQCSTDSRGNS+P+ILLLMQDRLYRQGG+KAEGIFRINPENSQEE+VRDKLNRGIIPEN
Sbjct: 121 SMQCSTDSRGNSVPMILLLMQDRLYRQGGLKAEGIFRINPENSQEEQVRDKLNRGIIPEN 180

Query: 181 IDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNWAVDL 240
           IDVHCLAGLIKAWFRELPSGVLDGLSPE+V+QCNTEEESVELVKQLKPTE++LLNWAVDL
Sbjct: 181 IDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTEASLLNWAVDL 240

Query: 241 MADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREEA 300
           MADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREEA
Sbjct: 241 MADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREEA 300

Query: 301 ASGGYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEGDRD--E 360
           ASGGYSPMSS  SD+QMDEDFDSQEDMDTGDESRGPNS+ + D I +N  SE+G+ +  E
Sbjct: 301 ASGGYSPMSSHSSDQQMDEDFDSQEDMDTGDESRGPNSDGEIDVIHFNHGSEDGEEEENE 360

Query: 361 GSLSEIEECFLRKLGETKAETKGSSARQQGDSEIDSSPRSCSGFNVESSISFTDSKNENS 420
           GSLSEIEECFLR+L ETK+ET   SARQ GD +IDSSPRSCSGFNVESS+SFTDSKN NS
Sbjct: 361 GSLSEIEECFLRQLNETKSET-CRSARQGGDLQIDSSPRSCSGFNVESSLSFTDSKNGNS 420

Query: 421 CLSTSDEEDSRTSLHEEEGQSIHSEVIP--RNNFIDDIQMDDKMREAVPLSPVIVSSNEL 478
           CLS+SD EDS TSLHE+E Q IH +V P   NN   DIQMDDKMRE V   P++V S E 
Sbjct: 421 CLSSSDGEDSGTSLHEDEEQRIHKDVHPIACNNSSIDIQMDDKMREPVLSMPMVVVSEES 475

[Close]

BLAST of Sed0012448 vs. ExPASy TrEMBL
Match: A0A6J1JMN4 (rho GTPase-activating protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111488256 PE=4 SV=1)

HSP 1 Score: 740.3 bits (1910), Expect = 4.9e-210
Identity = 401/481 (83.37%), Postives = 432/481 (89.81%), Query Frame = 0


Query: 1   MTGIVMVTRGGGCGGG-KLLRGGGGGGGKGSVGDDQNQLSLVDVMLAALRKSMVYCRVDR 60
           MTGIVMVTRGGGCGGG K+++    GG KGSV DDQNQLSLVDV+L ALRKSMVYCRVDR
Sbjct: 1   MTGIVMVTRGGGCGGGSKMVK----GGAKGSVSDDQNQLSLVDVLLTALRKSMVYCRVDR 60

Query: 61  GDELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSA 120
            +ELISTV QMEIGWPTNV HIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSA
Sbjct: 61  REELISTVQQMEIGWPTNVRHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSA 120

Query: 121 ESMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGIIPE 180
           ESMQCSTDSRGNS+P ILLLMQDRLYRQGG+KAEGIFRINPENSQEE+VRDKLNRGIIP+
Sbjct: 121 ESMQCSTDSRGNSVPRILLLMQDRLYRQGGLKAEGIFRINPENSQEEQVRDKLNRGIIPQ 180

Query: 181 NIDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNWAVD 240
           NIDVHCLAGLIKAWFRELPSGVLDGLSPEEV+QCNTEEESVELVK+LKPTE+ALL+WAVD
Sbjct: 181 NIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLQCNTEEESVELVKKLKPTEAALLSWAVD 240

Query: 241 LMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREE 300
           LMADVVEEED NKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREE
Sbjct: 241 LMADVVEEEDCNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREE 300

Query: 301 AASGGYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEGDRDEG 360
           AAS GYSPMSSR SD+QMDEDF+SQEDMDTGDES G NS+ +ND       +E+GD DEG
Sbjct: 301 AASDGYSPMSSRSSDQQMDEDFNSQEDMDTGDESGGSNSDVENDV------NEDGDEDEG 360

Query: 361 SLSEIEECFLRKLGETKAETKGSSARQQGDSEIDSSPRSCSGFNVESSISFTDSKNENSC 420
           SLSEIEECFLRKL +TK+ET+ SSAR++GD ++D SPRSCSG NVESSISFTDSKNENSC
Sbjct: 361 SLSEIEECFLRKLDDTKSETRRSSARREGDLDVDLSPRSCSGLNVESSISFTDSKNENSC 420

Query: 421 L-STSDEEDSRTSLHEEEGQSIHSEVIP--RNNFIDDIQMDDKMREAVPLSPVIVSSNEL 478
           L STSD ED  TSLHEEEGQSIH E++P    NFI DI MDDKMRE   L+ + V+SN  
Sbjct: 421 LSSTSDGEDPTTSLHEEEGQSIHKELVPIAYKNFI-DIHMDDKMREPASLTSMAVASNNS 470

[Close]

BLAST of Sed0012448 vs. ExPASy TrEMBL
Match: A0A6J1GNX9 (rho GTPase-activating protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111455798 PE=4 SV=1)

HSP 1 Score: 740.3 bits (1910), Expect = 4.9e-210
Identity = 401/481 (83.37%), Postives = 434/481 (90.23%), Query Frame = 0


Query: 1   MTGIVMVTRGGGCGGG-KLLRGGGGGGGKGSVGDDQNQLSLVDVMLAALRKSMVYCRVDR 60
           MTGIVMVTRGGGCGGG K+++GG  G    SV DDQNQ+SLVDV+L ALRKSMVYCRVDR
Sbjct: 1   MTGIVMVTRGGGCGGGTKMVKGGAKG---SSVSDDQNQISLVDVLLTALRKSMVYCRVDR 60

Query: 61  GDELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSA 120
            +ELISTVHQMEIGWPTNV HIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSA
Sbjct: 61  REELISTVHQMEIGWPTNVRHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSA 120

Query: 121 ESMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGIIPE 180
           ESMQCSTDSRGNS+P ILLLMQDRLYRQGG+KAEGIFRINPENSQEE+VRDKLNRGIIP+
Sbjct: 121 ESMQCSTDSRGNSVPRILLLMQDRLYRQGGLKAEGIFRINPENSQEEQVRDKLNRGIIPQ 180

Query: 181 NIDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNWAVD 240
           NIDVHCLAGLIKAWFRELPSGVLDGLSPEEV+QCNTEEESVELVK+LKPTE+ALL+WAVD
Sbjct: 181 NIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLQCNTEEESVELVKKLKPTEAALLSWAVD 240

Query: 241 LMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREE 300
           LMADVVEEED NKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREE
Sbjct: 241 LMADVVEEEDCNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREE 300

Query: 301 AASGGYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEGDRDEG 360
           AAS GYSPMSSR SDRQMDEDF+SQEDMDTGDES GPNS+ +ND       +E+GD DEG
Sbjct: 301 AASDGYSPMSSRSSDRQMDEDFNSQEDMDTGDESGGPNSDIENDV------NEDGDEDEG 360

Query: 361 SLSEIEECFLRKLGETKAETKGSSARQQGDSEIDSSPRSCSGFNVESSISFTDSKNENSC 420
           SLSEIE+CFLRKL +TK+ET+ SSAR++GD ++D SPRSCSG NVE SISFTDSKNENSC
Sbjct: 361 SLSEIEDCFLRKLDDTKSETRRSSARREGDLDVDLSPRSCSGLNVELSISFTDSKNENSC 420

Query: 421 L-STSDEEDSRTSLHEEEGQSIHSEV--IPRNNFIDDIQMDDKMREAVPLSPVIVSSNEL 478
           L STSD EDS TSLHEEEGQSIH E+  I   NFI DI MDDKMRE   L+ ++V+SN+ 
Sbjct: 421 LSSTSDGEDSTTSLHEEEGQSIHKELVSIACKNFI-DIHMDDKMREPASLTSMVVASNDS 471

[Close]

BLAST of Sed0012448 vs. TAIR 10
Match: AT4G03100.1 (Rho GTPase activating protein with PAK-box/P21-Rho-binding domain )

HSP 1 Score: 483.8 bits (1244), Expect = 1.6e-136
Identity = 283/449 (63.03%), Postives = 330/449 (73.50%), Query Frame = 0


Query: 1   MTGIVMVTRGGGCGGGKLLRGGGGGGGKGSVGDD------QNQLSLVDVMLAALRKSMVY 60
           MTG+VM+T+GGGCGG     GG GG  K +  ++      Q QLSLV+ +L ALRKS+V 
Sbjct: 1   MTGLVMMTKGGGCGG-----GGKGGRRKSTAEEEEEEEQNQQQLSLVEFLLTALRKSVVS 60

Query: 61  CRVDR-------GDELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSV 120
           CRVD        G  + S VH MEIGWPTNV HI HVTFDRF+GFLGLP E +VEIP  V
Sbjct: 61  CRVDNRQDDGGVGGGISSAVHHMEIGWPTNVRHITHVTFDRFHGFLGLPHELQVEIPCRV 120

Query: 121 PSASASVFGVSAESMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEE 180
           PSAS SVFGVSAESMQCS D +GNS+P ILLLMQ+RLY Q G+KAEGIFRINPENSQEE 
Sbjct: 121 PSASVSVFGVSAESMQCSYDEKGNSVPTILLLMQERLYSQQGLKAEGIFRINPENSQEEH 180

Query: 181 VRDKLNRGIIPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLK 240
           VRD+LNRGI+PENIDVHCLAGLIKAWFRELPSGVLDGLSPEEV+ CNTE+ESVEL+KQLK
Sbjct: 181 VRDQLNRGIVPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLNCNTEDESVELIKQLK 240

Query: 241 PTESALLNWAVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLK 300
           PTESALLNWAVDLMADVVEEE+SNKMNARNIAMVFAPNMTQM+DPLTALMHAVQVMNLLK
Sbjct: 241 PTESALLNWAVDLMADVVEEEESNKMNARNIAMVFAPNMTQMTDPLTALMHAVQVMNLLK 300

Query: 301 TLIMKTLREREEAASG--GYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPNSEA----D 360
           TLI KTL EREE A+G  GYSP  S  S+ Q D D D+ +DM+   ES+  +SE     +
Sbjct: 301 TLITKTLAEREENATGSEGYSP--SHSSNSQTDSDSDNAQDMEVSCESQATDSECGEEEE 360

Query: 361 NDAIDYNQ------SSEEGDRDEGSLSEIEECFLRKLGETKAETKGSSARQQGDSEIDSS 420
            + ++ +Q      S+ E + D GSL  IE+CFL +L    A    +S  +      D S
Sbjct: 361 VEEVEQHQEHLSRHSTHEDETDIGSLCSIEKCFLNQLNNNAARVSNTSISE------DWS 420

Query: 421 PRSCSGFNVESSISFTDSKNENSCLSTSD 425
           P++         +SFT++K+     STSD
Sbjct: 421 PKAF------PLVSFTENKSNTLSSSTSD 430

[Close]

BLAST of Sed0012448 vs. TAIR 10
Match: AT5G22400.1 (Rho GTPase activating protein with PAK-box/P21-Rho-binding domain )

HSP 1 Score: 368.2 bits (944), Expect = 9.8e-102
Identity = 210/355 (59.15%), Postives = 259/355 (72.96%), Query Frame = 0


Query: 20  RGGGGGGGKGSVGDDQNQLSLVDVMLAALRKSMVYCRVDRGDELISTVHQMEIGWPTNVL 79
           R    GG +   G+D  Q+SL+ +++A  R+S++ C+ +R  EL S    MEIGWPTNV 
Sbjct: 72  RSSTDGGEEDDGGED--QISLLALLVAIFRRSLISCKSNR-RELCS----MEIGWPTNVR 131

Query: 80  HIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSAESMQCSTDSRGNSIPVILLL 139
           H+AHVTFDRFNGFLGLPVEFE E+P   PSASA+VFGVS ESMQ S DSRGN +P ILLL
Sbjct: 132 HVAHVTFDRFNGFLGLPVEFEPEVPRRAPSASATVFGVSTESMQLSYDSRGNCVPTILLL 191

Query: 140 MQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGIIPENIDVHCLAGLIKAWFRELPS 199
           MQ+ LY QGG++AEGIFR+  ENS+EE VR++LNRG IPE IDVHCLAGLIKAWFRELP+
Sbjct: 192 MQNCLYSQGGLQAEGIFRLTAENSEEEAVREQLNRGFIPERIDVHCLAGLIKAWFRELPT 251

Query: 200 GVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNWAVDLMADVVEEEDSNKMNARNIA 259
            VLD LSPE+VMQC TEEE+VELV+ L PTE+ALL+WA++LMADVV+ E  NKMN+RNIA
Sbjct: 252 SVLDSLSPEQVMQCQTEEENVELVRLLPPTEAALLDWAINLMADVVQYEHLNKMNSRNIA 311

Query: 260 MVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREEAA--------------SGGY 319
           MVFAPNMTQM DPLTALM+AVQVMN LKTLI KTLRER+++               SG  
Sbjct: 312 MVFAPNMTQMDDPLTALMYAVQVMNFLKTLIEKTLRERQDSVVEQAHAFPLEPSDESGHQ 371

Query: 320 SPMSS-RFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEGDRDEG 360
           SP  S  F+  +  E  ++Q D     E++  +SE  ++    N + E+ + D G
Sbjct: 372 SPSQSLAFNTSEQSE--ETQSDNIENAENQSSSSEISDELTLENNACEQRETDFG 417

[Close]

BLAST of Sed0012448 vs. TAIR 10
Match: AT2G46710.1 (Rho GTPase activating protein with PAK-box/P21-Rho-binding domain )

HSP 1 Score: 354.8 bits (909), Expect = 1.1e-97
Identity = 208/389 (53.47%), Postives = 262/389 (67.35%), Query Frame = 0


Query: 25  GGGKGSVGDDQNQLSLVDVMLAALRKSMVY-CRVDRGDELISTVHQMEIGWPTNVLHIAH 84
           G G GS      QL++VD++ A LRKS+V  C ++RG++    V  M+IGWPT V H++H
Sbjct: 64  GNGSGS-----GQLTVVDLLAAVLRKSLVMSCAMERGED--DVVASMDIGWPTEVKHVSH 123

Query: 85  VTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSAESMQCSTDSRGNSIPVILLLMQDR 144
           VTFDRFNGFLGLP E E E+P   PSAS SVFGVSA+SMQCS D RGNS+P ILL MQ R
Sbjct: 124 VTFDRFNGFLGLPSELEPEVPPRAPSASVSVFGVSAKSMQCSYDDRGNSVPTILLRMQKR 183

Query: 145 LYRQGGIKAEGIFRINPENSQEEEVRDKLNRGIIPENIDVHCLAGLIKAWFRELPSGVLD 204
           LY +GG+KAEGIFRINP+N +EE VR +LN G++P  IDVHCLAGLIKAWFRELP+GVLD
Sbjct: 184 LYTEGGLKAEGIFRINPDNGKEEHVRRQLNCGVVPRGIDVHCLAGLIKAWFRELPTGVLD 243

Query: 205 GLSPEEVMQCNTEEESVELVKQLKPTESALLNWAVDLMADVVEEEDSNKMNARNIAMVFA 264
            L+PE+VM+CNTEE+   LV  L P ESA+L+WA+ LMADVVE E  NKMNARN+AMVFA
Sbjct: 244 VLTPEQVMRCNTEEDCSRLVILLPPVESAILDWAIGLMADVVEHEQFNKMNARNVAMVFA 303

Query: 265 PNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREEAASGGYSPMSSRFSDRQM---DED 324
           PNMTQM+DPLTAL+HAVQVMN LKTLI+  L+ERE A +       +R+  +Q     E+
Sbjct: 304 PNMTQMADPLTALIHAVQVMNFLKTLILMNLKERENADA------KARWLKKQTSDPSEE 363

Query: 325 FDSQEDMDTGDESRGPNS------------EADNDAIDYN---QSSEEGDRD----EGSL 384
           ++SQ       E    N+            EADN+   +N   ++  EG  D     G++
Sbjct: 364 WESQHSEILSPEKPNNNNPKFLRVATLCRLEADNEEEFWNIKKRNDHEGVLDTSSGNGNI 423

Query: 385 SEIEECFLRKLGETKAETKGS--SARQQG 389
             ++      L +    TK +  S R +G
Sbjct: 424 GPVQRLCKHPLFQLSKSTKKAFVSNRDEG 439

[Close]

BLAST of Sed0012448 vs. TAIR 10
Match: AT3G11490.1 (rac GTPase activating protein )

HSP 1 Score: 338.2 bits (866), Expect = 1.1e-92
Identity = 189/333 (56.76%), Postives = 242/333 (72.67%), Query Frame = 0


Query: 39  SLVDVMLAALRKSMVYCRVDRGDELISTVHQMEIGWPTNVLHIAHVTFDRFNGFLGLPVE 98
           S ++++++A+R+S++   V   D     +  MEIG PT+V H+AHVTFDRF+GFLGLPVE
Sbjct: 65  SALEILVSAIRRSVIGGCVGEED-----LCSMEIGVPTDVRHVAHVTFDRFHGFLGLPVE 124

Query: 99  FEVEIPSSVPSASASVFGVSAESMQCSTDSRGNSIPVILLLMQDRLYRQGGIKAEGIFRI 158
           FE E+P   PSASA+VFGVS ESMQ S D+RGN +P ILL+MQ  LY +GG++ EGIFRI
Sbjct: 125 FEPEVPRRAPSASATVFGVSTESMQLSYDTRGNIVPTILLMMQSHLYSRGGLRVEGIFRI 184

Query: 159 NPENSQEEEVRDKLNRGIIPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVMQCNTEEE 218
           N EN QEE +R++LN+GIIP+NIDVHCLA LIKAWFRELPSGVLD LSPE+VM+  +E+E
Sbjct: 185 NGENGQEEYIREELNKGIIPDNIDVHCLASLIKAWFRELPSGVLDSLSPEQVMESESEDE 244

Query: 219 SVELVKQLKPTESALLNWAVDLMADVVEEEDSNKMNARNIAMVFAPNMTQMSDPLTALMH 278
            VELV+ L  TE++LL+WA++LMADVVE E  NKMNARNIAMVFAPNMTQM DPLTALM+
Sbjct: 245 CVELVRLLPSTEASLLDWAINLMADVVEMEQLNKMNARNIAMVFAPNMTQMLDPLTALMY 304

Query: 279 AVQVMNLLKTLIMKTLREREEAASGGYSPMSSRFSDRQMDEDFDSQEDMDTGDESRGPN- 338
           AVQVMN LKTLI+KTL++R+E+             D+ +     S  D   GD+S     
Sbjct: 305 AVQVMNFLKTLIVKTLKDRKES------------RDKLVPASNPSPRD-HNGDQSSSRQL 364

Query: 339 ---SEADNDAIDYNQSSEEGDRDEGSLSEIEEC 368
               +A+ +    N  +E  D++E +  E EEC
Sbjct: 365 LHLMKANKEETLDNFEAEMKDKEESADEEEEEC 379

[Close]

BLAST of Sed0012448 vs. TAIR 10
Match: AT1G08340.1 (Rho GTPase activating protein with PAK-box/P21-Rho-binding domain )

HSP 1 Score: 330.1 bits (845), Expect = 2.9e-90
Identity = 187/334 (55.99%), Postives = 241/334 (72.16%), Query Frame = 0


Query: 70  MEIGWPTNVLHIAHVTFDRFNGFLGLPVEFEVEIPSSVPSASASVFGVSAESMQCSTDSR 129
           M+IG PTN+ H+AHVTFDRF+GFLGLP EFE ++P   PSASA+VFGVS ESMQ S DSR
Sbjct: 1   MDIGGPTNIRHVAHVTFDRFDGFLGLPSEFEPDVPRKAPSASATVFGVSTESMQLSYDSR 60

Query: 130 GNSIPVILLLMQDRLYRQGGIKAEGIFRINPENSQEEEVRDKLNRGIIPENIDVHCLAGL 189
           GN +PVILLL+Q RLY QGG++AEG+FRI  ENS+EE VR++LN+GIIP+ IDVHCLAGL
Sbjct: 61  GNCVPVILLLLQSRLYDQGGLQAEGVFRITGENSEEEFVREQLNKGIIPDGIDVHCLAGL 120

Query: 190 IKAWFRELPSGVLDGLSPEEVMQCNTEEESVELVKQLKPTESALLNWAVDLMADVVEEED 249
           IKAWFRELP GVLD L  E+VMQC ++E+ V++V+ L  TE++LLNWA++LMADV++ E 
Sbjct: 121 IKAWFRELPRGVLDPLPSEQVMQCESDEDFVKVVRLLPQTEASLLNWAINLMADVIQFEH 180

Query: 250 SNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREEAASGGYSPMS 309
            NKMN+RN+A+VFAPNM+QM+DPLTALM+AVQVM LLK+L  KT+RERE ++S      S
Sbjct: 181 VNKMNSRNLALVFAPNMSQMADPLTALMYAVQVMKLLKSLTEKTVREREASSSVVDRRCS 240

Query: 310 SRFSDRQMDEDFDSQEDMDTGDESRGPNSEADNDAIDYNQSSEEGDR----DEGSLSEIE 369
               D + ++D + +E+ +  +E      E D D        EEGD      E   SEI 
Sbjct: 241 KEAEDGEKEKDNEEEEEDEEEEE-----EEEDED----EDEEEEGDGVYIIKEEEASEII 300

Query: 370 ECFL--RKLGETKAETKGSSAR-QQGDSEIDSSP 397
           +      K G  K+E +GSSA   +GD+ +   P
Sbjct: 301 KVVADEHKSGSIKSEFEGSSATDSKGDNGVVQPP 325

The following BLAST results are available for this feature:

BLAST of Sed0012448 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897013.1	5.0e-217	85.45	rho GTPase-activating protein 2 [Benincasa hispida]	[more]
XP_008451421.1	1.9e-216	84.39	PREDICTED: rho GTPase-activating protein 2 [Cucumis melo] >KAA0057546.1 rho GTPa...	[more]
XP_004148879.1	9.8e-213	83.06	rho GTPase-activating protein 2 [Cucumis sativus] >KGN45394.2 hypothetical prote...	[more]
XP_022150274.1	2.2e-212	83.78	rho GTPase-activating protein 2 [Momordica charantia]	[more]
XP_023548475.1	3.2e-211	83.58	rho GTPase-activating protein 2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0012448 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JI46	2.2e-135	63.03	Rho GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP2 PE=1 ...	[more]
Q9FMR1	1.4e-100	59.15	Rho GTPase-activating protein 1 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP1 PE=2 ...	[more]
Q8GYY5	1.6e-96	53.47	Rho GTPase-activating protein 3 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP3 PE=2 ...	[more]
Q9CAX8	1.5e-91	56.76	Rho GTPase-activating protein 4 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP4 PE=2 ...	[more]
Q6NKT5	4.1e-89	55.99	Rho GTPase-activating protein 5 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP5 PE=2 ...	[more]

BLAST of Sed0012448 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D3Z7	9.2e-217	84.39	Rho GTPase-activating protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BQV1	9.2e-217	84.39	rho GTPase-activating protein 2 OS=Cucumis melo OX=3656 GN=LOC103492720 PE=4 SV=...	[more]
A0A6J1D9I6	1.1e-212	83.78	rho GTPase-activating protein 2 OS=Momordica charantia OX=3673 GN=LOC111018480 P...	[more]
A0A6J1JMN4	4.9e-210	83.37	rho GTPase-activating protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111488256 PE=4...	[more]
A0A6J1GNX9	4.9e-210	83.37	rho GTPase-activating protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111455798 PE...	[more]

BLAST of Sed0012448 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03100.1	1.6e-136	63.03	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain	[more]
AT5G22400.1	9.8e-102	59.15	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain	[more]
AT2G46710.1	1.1e-97	53.47	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain	[more]
AT3G11490.1	1.1e-92	56.76	rac GTPase activating protein	[more]
AT1G08340.1	2.9e-90	55.99	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	SMART	SM00285	PBD_5	coord: 72..106 e-value: 5.3E-7 score: 39.3
IPR000198	Rho GTPase-activating protein domain	SMART	SM00324	RhoGAP_3	coord: 131..294 e-value: 1.1E-29 score: 114.6
IPR000198	Rho GTPase-activating protein domain	PFAM	PF00620	RhoGAP	coord: 134..269 e-value: 2.3E-20 score: 73.0
IPR000198	Rho GTPase-activating protein domain	PROSITE	PS50238	RHOGAP	coord: 117..298 score: 24.622824
IPR008936	Rho GTPase activation protein	GENE3D	1.10.555.10	Rho GTPase activation protein	coord: 105..297 e-value: 2.2E-38 score: 133.8
IPR008936	Rho GTPase activation protein	SUPERFAMILY	48350	GTPase activation domain, GAP	coord: 112..291
IPR036936	CRIB domain superfamily	GENE3D	3.90.810.10	CRIB domain	coord: 67..104 e-value: 1.1E-5 score: 27.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 376..446
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 419..441
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..418
None	No IPR available	PANTHER	PTHR23177:SF62	RHO GTPASE ACTIVATION PROTEIN-RELATED	coord: 1..448
None	No IPR available	CDD	cd00132	CRIB	coord: 70..93 e-value: 2.33626E-5 score: 39.7293
None	No IPR available	CDD	cd00159	RhoGAP	coord: 134..290 e-value: 4.82352E-32 score: 118.558
IPR044785	Rho GTPase-activating protein 1-5	PANTHER	PTHR23177	MKIAA1688 PROTEIN	coord: 1..448

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012448.1	Sed0012448.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0007165	signal transduction
molecular_function	GO:0005096	GTPase activator activity