Sed0012439 (gene) Chayote v1

Overview


Name	Sed0012439
Type	gene
Organism	Sechium edule (Chayote v1)
Description	expansin B2
Location	LG02: 52702218 .. 52703519 (+)
RNA-Seq Expression	Sed0012439
Synteny	Sed0012439

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCTATAATTTATATTGAATAATGAGACAGACGTAAGGTGTATAAATAGGGAAACATTTGTTCCATGAAACCCACAAGTGAAGGTGCAGTGTAAAATGATGAGAGGATATTGTTATTCCCAGCTTTTATTTGGTGTACTTGTTTGTGCTTACAATGTTGCTCCTTGCTTCTCTTTCCATCCCAAATCCTCCAGCTTTAACGTGTCCTCCGATTGGTCCCCAGCTGTGGCCACTTGGTACGGCAGTCCTCACGGTGCCGGGAGTGATGGTACGTGTATGTGTACTTCAATTCATTTTACACTGCACTACAATGAAATGAAATAATTGTGTTTGTTTGAATCATAAATTATATAGGAGGTTCATGTGGGTACGGAACAGCGGTGGAGAAAGCCCCGTTTTGGTCCTTAATTGCTGCCGGAGGGCCTTCCTTGTACAACTCGGGGAAGGCGTGCGGGGCTTGTTATGAGGTCAAGTGCGAATTAGACGCATGCTCCGGGAACCCGGTCACGGTGGTCATTACCGATAGCTGTCCAGGCGGATCCTGCGCATCCGACAAAGTCCACTTCGACCTTAGCGGCACTGCTTTAGGTGCTATGGCTACCACGGGCCTAGCCGATCACCTCCGCGATCTCGGCATTTTGCACATTCAATACAAGAGGGTGGAGTGCAACTACCCCGACACTTTCATCAACTTCATCGTGGACTCAGGCTCCAACCCCAACTACCTCGCGCTTCTTATCGAGTATGAAGACGGAGATGGAGATCTTGGCTCGGTGGACCTAAAACAGGACTCCTCCGCATCATGGATTCCAATGACGCAGTCATGGGGAGCAGTTTGGAAACTCGACTTTGGGTCCCCTCTTCAGCCTCCCTTTTCCCTTAGGCTCACTACACTCGACTCGGCCAAAACCCTCGTCGCCACCAACGTAATTCCAATTGGGTGGCAGCCCGGACAGACTTATACATCGCTCGTCAACTTCGATACCTAATCCAACACTTCTACCTCAATAATCAAGGCCACCTACGACCCATGCTCTCTTTCTCTACGTAATACCAACCGTATCACTATCGCTTTGAATATTATGATTAATTGCTATGATAGGAAAAATATGCAACAACCCAAAGTCCACTTAATCAATACTAATGACTTTTTGGGTTTGTCACCAAACATCCACATGATTATATTTATATGGAAAAAAAAAAAATCTACTTCCTTCCAAATTAAACTAATATCCTATTAATCTTCTTCTAATATAATACTACTTATCTTATTTACTCATATTTATATATTCTCATTCTGCC

mRNA sequence

AATCTATAATTTATATTGAATAATGAGACAGACGTAAGGTGTATAAATAGGGAAACATTTGTTCCATGAAACCCACAAGTGAAGGTGCAGTGTAAAATGATGAGAGGATATTGTTATTCCCAGCTTTTATTTGGTGTACTTGTTTGTGCTTACAATGTTGCTCCTTGCTTCTCTTTCCATCCCAAATCCTCCAGCTTTAACGTGTCCTCCGATTGGTCCCCAGCTGTGGCCACTTGGTACGGCAGTCCTCACGGTGCCGGGAGTGATGGAGGTTCATGTGGGTACGGAACAGCGGTGGAGAAAGCCCCGTTTTGGTCCTTAATTGCTGCCGGAGGGCCTTCCTTGTACAACTCGGGGAAGGCGTGCGGGGCTTGTTATGAGGTCAAGTGCGAATTAGACGCATGCTCCGGGAACCCGGTCACGGTGGTCATTACCGATAGCTGTCCAGGCGGATCCTGCGCATCCGACAAAGTCCACTTCGACCTTAGCGGCACTGCTTTAGGTGCTATGGCTACCACGGGCCTAGCCGATCACCTCCGCGATCTCGGCATTTTGCACATTCAATACAAGAGGGTGGAGTGCAACTACCCCGACACTTTCATCAACTTCATCGTGGACTCAGGCTCCAACCCCAACTACCTCGCGCTTCTTATCGAGTATGAAGACGGAGATGGAGATCTTGGCTCGGTGGACCTAAAACAGGACTCCTCCGCATCATGGATTCCAATGACGCAGTCATGGGGAGCAGTTTGGAAACTCGACTTTGGGTCCCCTCTTCAGCCTCCCTTTTCCCTTAGGCTCACTACACTCGACTCGGCCAAAACCCTCGTCGCCACCAACGTAATTCCAATTGGGTGGCAGCCCGGACAGACTTATACATCGCTCGTCAACTTCGATACCTAATCCAACACTTCTACCTCAATAATCAAGGCCACCTACGACCCATGCTCTCTTTCTCTACGTAATACCAACCGTATCACTATCGCTTTGAATATTATGATTAATTGCTATGATAGGAAAAATATGCAACAACCCAAAGTCCACTTAATCAATACTAATGACTTTTTGGGTTTGTCACCAAACATCCACATGATTATATTTATATGGAAAAAAAAAAAATCTACTTCCTTCCAAATTAAACTAATATCCTATTAATCTTCTTCTAATATAATACTACTTATCTTATTTACTCATATTTATATATTCTCATTCTGCC

Coding sequence (CDS)

ATGATGAGAGGATATTGTTATTCCCAGCTTTTATTTGGTGTACTTGTTTGTGCTTACAATGTTGCTCCTTGCTTCTCTTTCCATCCCAAATCCTCCAGCTTTAACGTGTCCTCCGATTGGTCCCCAGCTGTGGCCACTTGGTACGGCAGTCCTCACGGTGCCGGGAGTGATGGAGGTTCATGTGGGTACGGAACAGCGGTGGAGAAAGCCCCGTTTTGGTCCTTAATTGCTGCCGGAGGGCCTTCCTTGTACAACTCGGGGAAGGCGTGCGGGGCTTGTTATGAGGTCAAGTGCGAATTAGACGCATGCTCCGGGAACCCGGTCACGGTGGTCATTACCGATAGCTGTCCAGGCGGATCCTGCGCATCCGACAAAGTCCACTTCGACCTTAGCGGCACTGCTTTAGGTGCTATGGCTACCACGGGCCTAGCCGATCACCTCCGCGATCTCGGCATTTTGCACATTCAATACAAGAGGGTGGAGTGCAACTACCCCGACACTTTCATCAACTTCATCGTGGACTCAGGCTCCAACCCCAACTACCTCGCGCTTCTTATCGAGTATGAAGACGGAGATGGAGATCTTGGCTCGGTGGACCTAAAACAGGACTCCTCCGCATCATGGATTCCAATGACGCAGTCATGGGGAGCAGTTTGGAAACTCGACTTTGGGTCCCCTCTTCAGCCTCCCTTTTCCCTTAGGCTCACTACACTCGACTCGGCCAAAACCCTCGTCGCCACCAACGTAATTCCAATTGGGTGGCAGCCCGGACAGACTTATACATCGCTCGTCAACTTCGATACCTAA

Protein sequence

MMRGYCYSQLLFGVLVCAYNVAPCFSFHPKSSSFNVSSDWSPAVATWYGSPHGAGSDGGSCGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKCELDACSGNPVTVVITDSCPGGSCASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDSGSNPNYLALLIEYEDGDGDLGSVDLKQDSSASWIPMTQSWGAVWKLDFGSPLQPPFSLRLTTLDSAKTLVATNVIPIGWQPGQTYTSLVNFDT

Homology

[Close]

BLAST of Sed0012439 vs. NCBI nr
Match: XP_022924767.1 (putative expansin-B2 [Cucurbita moschata])

HSP 1 Score: 407.9 bits (1047), Expect = 6.7e-110
Identity = 204/272 (75.00%), Postives = 223/272 (81.99%), Query Frame = 0


Query: 5   YCYSQLLFGVLVCAYNVAPCFSFHPKSSSFNVS------SDWSPAVATWYGSPHGAGSDG 64
           Y Y  LLF  L+ + ++ PCF FHPK  SFNVS       DWSPA+ATWYG+P+GAGSDG
Sbjct: 11  YYYCSLLFPALL-SLSLTPCFCFHPK--SFNVSMYQSYDPDWSPAIATWYGTPNGAGSDG 70

Query: 65  GSCGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKCELD-ACSGNPVTVVITDSCP 124
           GSCGYG AVE+ PF SLIAAGGPSLY SGKACGACY+VKC  + ACSG PVTVVITDSCP
Sbjct: 71  GSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGGPVTVVITDSCP 130

Query: 125 GGSCASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDSGS 184
           GGSCASD VHFDLSGTA GAMA TG AD LR LG+LHIQ+K VECNYP T INFIVDSGS
Sbjct: 131 GGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHKSVECNYPGTSINFIVDSGS 190

Query: 185 NPNYLALLIEYEDGDGDLGSVDLKQD-SSASWIPMTQSWGAVWKLDFGSPLQPPFSLRLT 244
           NPNY A+LIEYEDGDG+LG V+LK   +S SWIPM QSWGAVWKLD  S LQPPFSLRLT
Sbjct: 191 NPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGAVWKLDSASALQPPFSLRLT 250

Query: 245 TLDSAKTLVATNVIPIGWQPGQTYTSLVNFDT 269
            LDS KT+VA NVIP+GWQPGQTY S+VNFDT
Sbjct: 251 ALDSGKTVVANNVIPVGWQPGQTYRSVVNFDT 279

[Close]

BLAST of Sed0012439 vs. NCBI nr
Match: XP_023528384.1 (putative expansin-B2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 405.6 bits (1041), Expect = 3.3e-109
Identity = 203/272 (74.63%), Postives = 224/272 (82.35%), Query Frame = 0


Query: 5   YCYSQLLFGVLVCAYNVAPCFSFHPKSSSFNVS------SDWSPAVATWYGSPHGAGSDG 64
           Y Y  LLF  L+ + ++ PCF FHPK  SFNVS       DWSPA+ATWYG+P+GAGSDG
Sbjct: 12  YYYCSLLFPALL-SLSLTPCFCFHPK--SFNVSMYQSYDPDWSPAIATWYGTPNGAGSDG 71

Query: 65  GSCGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKCELD-ACSGNPVTVVITDSCP 124
           GSCGYG AVE+ PF SLIAAGGPSLY SGKACGACY+VKC  + ACSG+PVTVVITDSCP
Sbjct: 72  GSCGYGRAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGSPVTVVITDSCP 131

Query: 125 GGSCASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDSGS 184
           GGSCASD VHFDLSGTA GAMA TG AD LR LG+LHIQ+KRVECNYP T INFIVDSGS
Sbjct: 132 GGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHKRVECNYPGTSINFIVDSGS 191

Query: 185 NPNYLALLIEYEDGDGDLGSVDLKQD-SSASWIPMTQSWGAVWKLDFGSPLQPPFSLRLT 244
           NP+Y A+LIEYEDGDG+LG V+LK   +S SWIPM QSWGAVWKLD  S LQPPFSLRLT
Sbjct: 192 NPDYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGAVWKLDSASALQPPFSLRLT 251

Query: 245 TLDSAKTLVATNVIPIGWQPGQTYTSLVNFDT 269
            LDS KT+VA NVIP+ WQPGQTY S+VNFDT
Sbjct: 252 ALDSGKTVVANNVIPVRWQPGQTYRSVVNFDT 280

[Close]

BLAST of Sed0012439 vs. NCBI nr
Match: XP_038876740.1 (putative expansin-B2 [Benincasa hispida])

HSP 1 Score: 399.8 bits (1026), Expect = 1.8e-107
Identity = 202/266 (75.94%), Postives = 216/266 (81.20%), Query Frame = 0


Query: 11  LFGVLVCAYNVAPCFSFHPKSSSFNVSS------DWSPAVATWYGSPHGAGSDGGSCGYG 70
           LF V + + +V P F FHPK  SFNVS       DWS AVATWYG   GAGSDGGSCGYG
Sbjct: 5   LFFVAILSVSVTPSFCFHPK--SFNVSKYQSYDLDWSSAVATWYGPADGAGSDGGSCGYG 64

Query: 71  TAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKCELD-ACSGNPVTVVITDSCPGGSCAS 130
            AVE+ PF SLIAAGGPSLY SGKACGACY+VKC  + ACSGNPVTVVITDSCPGGSCAS
Sbjct: 65  KAVEQPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGNPVTVVITDSCPGGSCAS 124

Query: 131 DKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDSGSNPNYLA 190
           D VHFDLSGTA GAMA TG AD LR LG+LHIQ+KRVECNYP T INFIVDSGSN NY A
Sbjct: 125 DSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHKRVECNYPGTSINFIVDSGSNSNYFA 184

Query: 191 LLIEYEDGDGDLGSVDLKQD-SSASWIPMTQSWGAVWKLDFGSPLQPPFSLRLTTLDSAK 250
            LIEYEDGDG+LGSV+LKQ   S SWIPM QSWGAVWKLD+GS LQ PFSLRLT LDS K
Sbjct: 185 ALIEYEDGDGELGSVELKQAVDSYSWIPMKQSWGAVWKLDYGSALQAPFSLRLTALDSGK 244

Query: 251 TLVATNVIPIGWQPGQTYTSLVNFDT 269
           T+VA NVIP GWQPGQ+Y S+VNFDT
Sbjct: 245 TVVANNVIPAGWQPGQSYRSVVNFDT 268

[Close]

BLAST of Sed0012439 vs. NCBI nr
Match: XP_022151532.1 (putative expansin-B2 isoform X2 [Momordica charantia])

HSP 1 Score: 395.2 bits (1014), Expect = 4.5e-106
Identity = 200/270 (74.07%), Postives = 215/270 (79.63%), Query Frame = 0


Query: 7   YSQLLFGVLVCAYNVAPCFSFHPKSSSFNVS------SDWSPAVATWYGSPHGAGSDGGS 66
           YS   F  L+    + P FSFHPK  SFNVS      SDWSPAVATWYGS  GAGSDGG+
Sbjct: 8   YSLFFFAALLSVSLITPSFSFHPK--SFNVSMYQSPDSDWSPAVATWYGSRDGAGSDGGA 67

Query: 67  CGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKC-ELDACSGNPVTVVITDSCPGG 126
           CGYG AVE+ PF SLIAAGGPSLY SGKACGACY+VKC E  ACSGNPVTVVITDSCPGG
Sbjct: 68  CGYGEAVEQPPFSSLIAAGGPSLYKSGKACGACYQVKCSEKAACSGNPVTVVITDSCPGG 127

Query: 127 SCASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDSGSNP 186
           SCASD VHFDLSGTA GAMA  G AD LR+LG+L IQ+KRVECNYP   INF+VDSGSN 
Sbjct: 128 SCASDSVHFDLSGTAFGAMAAAGRADELRNLGVLQIQHKRVECNYPGRSINFVVDSGSNS 187

Query: 187 NYLALLIEYEDGDGDLGSVDLKQD-SSASWIPMTQSWGAVWKLDFGSPLQPPFSLRLTTL 246
           NY A LIEY DGDGD+GSV+LKQ   S SW PM QSWGAVWKLD GS LQ PFSL+LT+L
Sbjct: 188 NYFAALIEYGDGDGDVGSVELKQALDSYSWTPMQQSWGAVWKLDSGSALQAPFSLKLTSL 247

Query: 247 DSAKTLVATNVIPIGWQPGQTYTSLVNFDT 269
           DS KT+VA NVIP GW+PGQTY SLVNFDT
Sbjct: 248 DSGKTVVANNVIPAGWKPGQTYRSLVNFDT 275

[Close]

BLAST of Sed0012439 vs. NCBI nr
Match: XP_022979601.1 (putative expansin-B2 [Cucurbita maxima])

HSP 1 Score: 392.5 bits (1007), Expect = 2.9e-105
Identity = 199/272 (73.16%), Postives = 219/272 (80.51%), Query Frame = 0


Query: 5   YCYSQLLFGVLVCAYNVAPCFSFHPKSSSFNVSS------DWSPAVATWYGSPHGAGSDG 64
           Y Y  LLF  L+ + ++ PCF F  K  SFNVS       DWSPA+ATWYG+P+GAGSDG
Sbjct: 10  YYYCSLLFPALL-SLSLTPCFCFPLK--SFNVSMYQSYDLDWSPAIATWYGTPNGAGSDG 69

Query: 65  GSCGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKCELD-ACSGNPVTVVITDSCP 124
           GSCGY  AVE+ PF SLIAAGGPSLY SGKACGACY+VKC  + ACSG+PVTVVITDSCP
Sbjct: 70  GSCGYEKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGSPVTVVITDSCP 129

Query: 125 GGSCASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDSGS 184
           GGSCASD VHFDLSGTA GAMA  G AD LR LG+LHIQ+KRVECNYP T INFIVDSGS
Sbjct: 130 GGSCASDSVHFDLSGTAFGAMAAPGRADELRSLGVLHIQHKRVECNYPGTSINFIVDSGS 189

Query: 185 NPNYLALLIEYEDGDGDLGSVDLKQD-SSASWIPMTQSWGAVWKLDFGSPLQPPFSLRLT 244
           NPNY A+LIEYEDGDG+LG V+LK   +S SWIPM QSWGAVWKLD  S LQPPFSLRLT
Sbjct: 190 NPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMQQSWGAVWKLDSASALQPPFSLRLT 249

Query: 245 TLDSAKTLVATNVIPIGWQPGQTYTSLVNFDT 269
            L S KT+VA  VIP+GWQPGQTY S+VNFDT
Sbjct: 250 ALGSGKTVVANKVIPVGWQPGQTYRSVVNFDT 278

[Close]

BLAST of Sed0012439 vs. ExPASy Swiss-Prot
Match: Q5W6Z9 (Expansin-B18 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB18 PE=2 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.8e-82
Identity = 154/259 (59.46%), Postives = 188/259 (72.59%), Query Frame = 0


Query: 14  VLVCAYNV--APCFS--FHPKSSSFNVSSDWSPAVATWYGSPHGAGSDGGSCGYGTAVEK 73
           V++ A+ +   PC S  FH K SS      WS   ATWYG+ +GAGSDGG+CGY  AV++
Sbjct: 13  VVIAAFTLLPRPCASIEFHRKLSS------WSNGGATWYGAANGAGSDGGACGYQAAVDQ 72

Query: 74  APFWSLIAAGGPSLYNSGKACGACYEVKCE-LDACSGNPVTVVITDSCPGGSCASDKVHF 133
           APF S+IAAG PS+Y SG  CG+CY+VKC    ACSGNPVTVV+TD CPGG C S+ VHF
Sbjct: 73  APFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSACSGNPVTVVLTDECPGGPCLSEPVHF 132

Query: 134 DLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDSGSNPNYLALLIEY 193
           DLSGTA GAMA  G AD LR  G+L IQY RV CN+    + F VD+GSNP+Y A+L++Y
Sbjct: 133 DLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVMLTFAVDAGSNPSYFAVLVKY 192

Query: 194 EDGDGDLGSVDLKQ-DSSASWIPMTQSWGAVWKLDFGSPLQPPFSLRLTTLDSAKTLVAT 253
           E+GDGDL  +DL Q  + A+W PM QSWGAVWKL  G+ LQ P S+RLT+  S KTLVA+
Sbjct: 193 ENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLTS-SSGKTLVAS 252

Query: 254 NVIPIGWQPGQTYTSLVNF 267
           NVIP GW+PG +YTS VN+
Sbjct: 253 NVIPSGWKPGASYTSTVNY 264

[Close]

BLAST of Sed0012439 vs. ExPASy Swiss-Prot
Match: Q7XT40 (Expansin-B15 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB15 PE=3 SV=2)

HSP 1 Score: 303.5 bits (776), Expect = 2.3e-81
Identity = 154/248 (62.10%), Postives = 181/248 (72.98%), Query Frame = 0


Query: 23  PCFS--FHPKSSSFNVSSDWSPAVATWYGSPHGAGSDGGSCGYGTAVEKAPFWSLIAAGG 82
           PC S  FH K SS      WS   ATWYG+ +GAGSDGG+CGY  AV +APF S+IAAG 
Sbjct: 24  PCASIEFHRKLSS------WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGS 83

Query: 83  PSLYNSGKACGACYEVKCE-LDACSGNPVTVVITDSCPGGSCASDKVHFDLSGTALGAMA 142
           PS+Y SG  CG+CY+VKC    ACSGNPVTVV+TD CPGG C S+ VHFDLSGTA GAMA
Sbjct: 84  PSIYKSGLGCGSCYQVKCTGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMA 143

Query: 143 TTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDSGSNPNYLALLIEYEDGDGDLGSVD 202
             G AD LR  G+L IQY RV CN+    + F+VD GSNPNY A+L++YE+GDGDL  V+
Sbjct: 144 NPGQADQLRAAGVLQIQYNRVPCNWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVE 203

Query: 203 LKQ-DSSASWIPMTQSWGAVWKLDFGSPLQPPFSLRLTTLDSAKTLVATNVIPIGWQPGQ 262
           L Q  + A+W  M QSWGAVWKL+ GS LQ PFS+RLT+  S KTLVA+NVIP GW+PG 
Sbjct: 204 LMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTS-SSGKTLVASNVIPSGWKPGM 263

Query: 263 TYTSLVNF 267
           +Y S VNF
Sbjct: 264 SYISTVNF 264

[Close]

BLAST of Sed0012439 vs. ExPASy Swiss-Prot
Match: Q9SHY6 (Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2)

HSP 1 Score: 299.3 bits (765), Expect = 4.4e-80
Identity = 154/272 (56.62%), Postives = 187/272 (68.75%), Query Frame = 0


Query: 3   RGYCYSQLLFGVLVCAYNVAPCFSFHPKSSSFNVS------SDWSPAVATWYGSPHGAGS 62
           R Y    LLF +     N+  CFS  PK   FN+S      SDWS A +TWYG+P G GS
Sbjct: 8   RYYMLMNLLFALTCLLLNLTHCFS--PK--KFNISAATTSDSDWSIAGSTWYGNPTGYGS 67

Query: 63  DGGSCGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKC-ELDACSGNPVTVVITDS 122
           DGG+CGYG AV + PF  +++AGGPSL+ SGK CGACY+VKC    ACS NPVTVVITD 
Sbjct: 68  DGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITDE 127

Query: 123 CPGGSCASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDS 182
           CPG  C  + VHFDLSGTA GAMA +G    LR++G L I YK+VECNY    + F VD 
Sbjct: 128 CPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDK 187

Query: 183 GSNPNYLALLIEYEDGDGDLGSVDLKQD-SSASWIPMTQSWGAVWKLDFGSPLQPPFSLR 242
           GSN N  A+L+ Y +GDG++G ++LKQ   S  W+ M+QSWGAVWKLD  SPL+ P SLR
Sbjct: 188 GSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLR 247

Query: 243 LTTLDSAKTLVATNVIPIGWQPGQTYTSLVNF 267
           +T+L+S KT+VA+NVIP  WQPG  Y S VNF
Sbjct: 248 VTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of Sed0012439 vs. ExPASy Swiss-Prot
Match: Q6H676 (Expansin-B11 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB11 PE=2 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 6.6e-76
Identity = 141/239 (59.00%), Postives = 172/239 (71.97%), Query Frame = 0


Query: 31  SSSFNVSSDWSPAVATWYGSPHGAGSDGGSCGYGTAVEKAPFWSLIAAGGPSLYNSGKAC 90
           S S  V++ W+ A AT+YG+P+G GSDGG+CGY TAV + PF S+IAAG PSLY  GK C
Sbjct: 55  SPSVTVTTGWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGC 114

Query: 91  GACYEVKCELD-ACSGNPVTVVITDSCPGGSCASDKVHFDLSGTALGAMATTGLADHLRD 150
           GACYEVKC  + ACSG P TVVITD CPGG C +   HFD+SGT++GAMA  G+AD LR 
Sbjct: 115 GACYEVKCTTNAACSGQPATVVITDECPGGICLAGAAHFDMSGTSMGAMAKPGMADKLRA 174

Query: 151 LGILHIQYKRVECNYPDTFINFIVDSGSNPNYLALLIEYEDGDGDLGSVDLKQDSSASWI 210
            GIL +QY+RV C Y    I F VD G+NP Y  +LIE+EDGDGDL +VDL  ++   W 
Sbjct: 175 AGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDL-MEAGCGWT 234

Query: 211 PMTQSWGAVWKL--DFGSPLQPPFSLRLTTLDSAKTLVATNVIPIGWQPGQTYTSLVNF 267
           PM Q+WGA+W+   + G  L+ PFSLRLT+ DS K LVA NVIP  W+PG TY SLVN+
Sbjct: 235 PMVQNWGALWRYNSNTGKALKAPFSLRLTS-DSGKVLVANNVIPASWKPGVTYRSLVNY 291

[Close]

BLAST of Sed0012439 vs. ExPASy Swiss-Prot
Match: Q6H677 (Putative expansin-B14 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB14 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.0e-72
Identity = 139/235 (59.15%), Postives = 168/235 (71.49%), Query Frame = 0


Query: 38  SDWSPAVATWYGSPHGAGSDGGSCGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVK 97
           S WS   ATWYG  +G+G+DGG+CGY   V + PF S+IAAG PS+Y SGK CG+CY+VK
Sbjct: 36  SGWSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVK 95

Query: 98  CELD-ACSGNPVTVVITDSCPGGSCASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQ 157
           C  + +CSG PVTVV+TD CPGG+C  + VHFDLSGTA GAMA  G  D LR+ G L +Q
Sbjct: 96  CSGNPSCSGKPVTVVLTDLCPGGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQ 155

Query: 158 YKRVECNYPDTFINFIVDSGSNPNYLALLIEYEDGDGDLGSVDLKQDSSA----SWIPMT 217
           Y RV C +    I F VD+GSN  YLA+L+E EDGDGDL +VDL Q   +    SW  M 
Sbjct: 156 YARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQ 215

Query: 218 QSWGAVWKLDFG-SPLQPPFSLRLTTLDSAKTLVATNVIPIGWQPGQTYTSLVNF 267
           QSWGAVWK + G +PLQ P S+RLT+  S +TLVA+NVIP GWQPG TY S+VNF
Sbjct: 216 QSWGAVWKYNSGPAPLQAPMSIRLTS-GSGRTLVASNVIPAGWQPGGTYRSIVNF 269

[Close]

BLAST of Sed0012439 vs. ExPASy TrEMBL
Match: A0A6J1E9X0 (putative expansin-B2 OS=Cucurbita moschata OX=3662 GN=LOC111432169 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 3.2e-110
Identity = 204/272 (75.00%), Postives = 223/272 (81.99%), Query Frame = 0


Query: 5   YCYSQLLFGVLVCAYNVAPCFSFHPKSSSFNVS------SDWSPAVATWYGSPHGAGSDG 64
           Y Y  LLF  L+ + ++ PCF FHPK  SFNVS       DWSPA+ATWYG+P+GAGSDG
Sbjct: 11  YYYCSLLFPALL-SLSLTPCFCFHPK--SFNVSMYQSYDPDWSPAIATWYGTPNGAGSDG 70

Query: 65  GSCGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKCELD-ACSGNPVTVVITDSCP 124
           GSCGYG AVE+ PF SLIAAGGPSLY SGKACGACY+VKC  + ACSG PVTVVITDSCP
Sbjct: 71  GSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGGPVTVVITDSCP 130

Query: 125 GGSCASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDSGS 184
           GGSCASD VHFDLSGTA GAMA TG AD LR LG+LHIQ+K VECNYP T INFIVDSGS
Sbjct: 131 GGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHKSVECNYPGTSINFIVDSGS 190

Query: 185 NPNYLALLIEYEDGDGDLGSVDLKQD-SSASWIPMTQSWGAVWKLDFGSPLQPPFSLRLT 244
           NPNY A+LIEYEDGDG+LG V+LK   +S SWIPM QSWGAVWKLD  S LQPPFSLRLT
Sbjct: 191 NPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGAVWKLDSASALQPPFSLRLT 250

Query: 245 TLDSAKTLVATNVIPIGWQPGQTYTSLVNFDT 269
            LDS KT+VA NVIP+GWQPGQTY S+VNFDT
Sbjct: 251 ALDSGKTVVANNVIPVGWQPGQTYRSVVNFDT 279

[Close]

BLAST of Sed0012439 vs. ExPASy TrEMBL
Match: A0A6J1DDS1 (putative expansin-B2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019444 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.2e-106
Identity = 200/270 (74.07%), Postives = 215/270 (79.63%), Query Frame = 0


Query: 7   YSQLLFGVLVCAYNVAPCFSFHPKSSSFNVS------SDWSPAVATWYGSPHGAGSDGGS 66
           YS   F  L+    + P FSFHPK  SFNVS      SDWSPAVATWYGS  GAGSDGG+
Sbjct: 8   YSLFFFAALLSVSLITPSFSFHPK--SFNVSMYQSPDSDWSPAVATWYGSRDGAGSDGGA 67

Query: 67  CGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKC-ELDACSGNPVTVVITDSCPGG 126
           CGYG AVE+ PF SLIAAGGPSLY SGKACGACY+VKC E  ACSGNPVTVVITDSCPGG
Sbjct: 68  CGYGEAVEQPPFSSLIAAGGPSLYKSGKACGACYQVKCSEKAACSGNPVTVVITDSCPGG 127

Query: 127 SCASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDSGSNP 186
           SCASD VHFDLSGTA GAMA  G AD LR+LG+L IQ+KRVECNYP   INF+VDSGSN 
Sbjct: 128 SCASDSVHFDLSGTAFGAMAAAGRADELRNLGVLQIQHKRVECNYPGRSINFVVDSGSNS 187

Query: 187 NYLALLIEYEDGDGDLGSVDLKQD-SSASWIPMTQSWGAVWKLDFGSPLQPPFSLRLTTL 246
           NY A LIEY DGDGD+GSV+LKQ   S SW PM QSWGAVWKLD GS LQ PFSL+LT+L
Sbjct: 188 NYFAALIEYGDGDGDVGSVELKQALDSYSWTPMQQSWGAVWKLDSGSALQAPFSLKLTSL 247

Query: 247 DSAKTLVATNVIPIGWQPGQTYTSLVNFDT 269
           DS KT+VA NVIP GW+PGQTY SLVNFDT
Sbjct: 248 DSGKTVVANNVIPAGWKPGQTYRSLVNFDT 275

[Close]

BLAST of Sed0012439 vs. ExPASy TrEMBL
Match: A0A6J1IR92 (putative expansin-B2 OS=Cucurbita maxima OX=3661 GN=LOC111479279 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.4e-105
Identity = 199/272 (73.16%), Postives = 219/272 (80.51%), Query Frame = 0


Query: 5   YCYSQLLFGVLVCAYNVAPCFSFHPKSSSFNVSS------DWSPAVATWYGSPHGAGSDG 64
           Y Y  LLF  L+ + ++ PCF F  K  SFNVS       DWSPA+ATWYG+P+GAGSDG
Sbjct: 10  YYYCSLLFPALL-SLSLTPCFCFPLK--SFNVSMYQSYDLDWSPAIATWYGTPNGAGSDG 69

Query: 65  GSCGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKCELD-ACSGNPVTVVITDSCP 124
           GSCGY  AVE+ PF SLIAAGGPSLY SGKACGACY+VKC  + ACSG+PVTVVITDSCP
Sbjct: 70  GSCGYEKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGSPVTVVITDSCP 129

Query: 125 GGSCASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDSGS 184
           GGSCASD VHFDLSGTA GAMA  G AD LR LG+LHIQ+KRVECNYP T INFIVDSGS
Sbjct: 130 GGSCASDSVHFDLSGTAFGAMAAPGRADELRSLGVLHIQHKRVECNYPGTSINFIVDSGS 189

Query: 185 NPNYLALLIEYEDGDGDLGSVDLKQD-SSASWIPMTQSWGAVWKLDFGSPLQPPFSLRLT 244
           NPNY A+LIEYEDGDG+LG V+LK   +S SWIPM QSWGAVWKLD  S LQPPFSLRLT
Sbjct: 190 NPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMQQSWGAVWKLDSASALQPPFSLRLT 249

Query: 245 TLDSAKTLVATNVIPIGWQPGQTYTSLVNFDT 269
            L S KT+VA  VIP+GWQPGQTY S+VNFDT
Sbjct: 250 ALGSGKTVVANKVIPVGWQPGQTYRSVVNFDT 278

[Close]

BLAST of Sed0012439 vs. ExPASy TrEMBL
Match: A0A1S3AUH4 (putative expansin-B2 OS=Cucumis melo OX=3656 GN=LOC103483118 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.1e-105
Identity = 196/268 (73.13%), Postives = 218/268 (81.34%), Query Frame = 0


Query: 10  LLFGVLVCAYNVAP-CFSFHPKSSSFNVS------SDWSPAVATWYGSPHGAGSDGGSCG 69
           L F  L+ + ++ P  F FHPK  SFNVS      SDWSPAVATWYG P GAGSDGGSCG
Sbjct: 5   LFFAALIISLSLTPTSFCFHPK--SFNVSKYQSYDSDWSPAVATWYGPPDGAGSDGGSCG 64

Query: 70  YGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKCELD-ACSGNPVTVVITDSCPGGSC 129
           YG AVE+ PF S IAAGGPSLY +G+ACGACY+VKC  + ACSGNPVTVVITDSCPGGSC
Sbjct: 65  YGKAVEQPPFSSFIAAGGPSLYKNGQACGACYQVKCSGESACSGNPVTVVITDSCPGGSC 124

Query: 130 ASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDSGSNPNY 189
           ASD VHFDLSGTA GAMA TG A+ LR LG+LHIQ+KRVECNYP T INFIVDSGSN NY
Sbjct: 125 ASDSVHFDLSGTAFGAMAATGRAEELRSLGVLHIQHKRVECNYPGTSINFIVDSGSNSNY 184

Query: 190 LALLIEYEDGDGDLGSVDLKQDS--SASWIPMTQSWGAVWKLDFGSPLQPPFSLRLTTLD 249
            A LIEYEDGDG+LGSV+LKQ +  S SWIPM +SWGAVWKLD+GS LQ PFSLRLT L+
Sbjct: 185 FAALIEYEDGDGELGSVELKQGALDSNSWIPMKRSWGAVWKLDYGSALQAPFSLRLTALE 244

Query: 250 SAKTLVATNVIPIGWQPGQTYTSLVNFD 268
           S KT+VA NVIP GWQPG++Y S+VNFD
Sbjct: 245 SGKTVVANNVIPAGWQPGKSYRSVVNFD 270

[Close]

BLAST of Sed0012439 vs. ExPASy TrEMBL
Match: A0A0A0L8B4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117420 PE=3 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 9.1e-105
Identity = 198/268 (73.88%), Postives = 216/268 (80.60%), Query Frame = 0


Query: 10  LLFGVLVCAYNVA-PCFSFHPKSSSFNVS------SDWSPAVATWYGSPHGAGSDGGSCG 69
           L F  L+ + ++A P F FHPK  SFNVS      SDWSPAVATWYG P GAGSDGGSCG
Sbjct: 5   LFFAALIISLSLAPPSFCFHPK--SFNVSKYQSDDSDWSPAVATWYGPPDGAGSDGGSCG 64

Query: 70  YGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKCELD-ACSGNPVTVVITDSCPGGSC 129
           YG AVE+ PF S IAAGGPSLY  G+ACGACY+VKC  + ACSGNPVTVVITDSCPGGSC
Sbjct: 65  YGKAVEQPPFSSFIAAGGPSLYKYGQACGACYQVKCSGEGACSGNPVTVVITDSCPGGSC 124

Query: 130 ASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDSGSNPNY 189
           ASD VHFDLSGTA GAMA TG A+ LR LG+LHIQ+KRVECNYP T INFIVDSGSN NY
Sbjct: 125 ASDSVHFDLSGTAFGAMAATGRAEELRSLGVLHIQHKRVECNYPGTSINFIVDSGSNSNY 184

Query: 190 LALLIEYEDGDGDLGSVDLKQDS--SASWIPMTQSWGAVWKLDFGSPLQPPFSLRLTTLD 249
            A LIEYEDGDG+LGSV+LKQ +  S SWIPM QSWGAVWKLD GS LQ PFSLRLT LD
Sbjct: 185 FAALIEYEDGDGELGSVELKQGAVDSNSWIPMKQSWGAVWKLDSGSALQAPFSLRLTALD 244

Query: 250 SAKTLVATNVIPIGWQPGQTYTSLVNFD 268
           S KT+VA NVIP GWQ G++Y S+VNFD
Sbjct: 245 SGKTVVANNVIPAGWQAGKSYRSVVNFD 270

[Close]

BLAST of Sed0012439 vs. TAIR 10
Match: AT1G65680.1 (expansin B2 )

HSP 1 Score: 299.3 bits (765), Expect = 3.1e-81
Identity = 154/272 (56.62%), Postives = 187/272 (68.75%), Query Frame = 0


Query: 3   RGYCYSQLLFGVLVCAYNVAPCFSFHPKSSSFNVS------SDWSPAVATWYGSPHGAGS 62
           R Y    LLF +     N+  CFS  PK   FN+S      SDWS A +TWYG+P G GS
Sbjct: 8   RYYMLMNLLFALTCLLLNLTHCFS--PK--KFNISAATTSDSDWSIAGSTWYGNPTGYGS 67

Query: 63  DGGSCGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKC-ELDACSGNPVTVVITDS 122
           DGG+CGYG AV + PF  +++AGGPSL+ SGK CGACY+VKC    ACS NPVTVVITD 
Sbjct: 68  DGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITDE 127

Query: 123 CPGGSCASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINFIVDS 182
           CPG  C  + VHFDLSGTA GAMA +G    LR++G L I YK+VECNY    + F VD 
Sbjct: 128 CPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDK 187

Query: 183 GSNPNYLALLIEYEDGDGDLGSVDLKQD-SSASWIPMTQSWGAVWKLDFGSPLQPPFSLR 242
           GSN N  A+L+ Y +GDG++G ++LKQ   S  W+ M+QSWGAVWKLD  SPL+ P SLR
Sbjct: 188 GSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLR 247

Query: 243 LTTLDSAKTLVATNVIPIGWQPGQTYTSLVNF 267
           +T+L+S KT+VA+NVIP  WQPG  Y S VNF
Sbjct: 248 VTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of Sed0012439 vs. TAIR 10
Match: AT2G45110.1 (expansin B4 )

HSP 1 Score: 259.2 bits (661), Expect = 3.6e-69
Identity = 120/225 (53.33%), Postives = 164/225 (72.89%), Query Frame = 0


Query: 43  AVATWYGSPHGAGSDGGSCGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKC-ELD 102
           A  TWYG P GAGS GG+CGYG+AV   P +++++AGGPSL+N+GK CG CY+V C    
Sbjct: 36  AGVTWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHP 95

Query: 103 ACSGNPVTVVITDSCPGGSCASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVE 162
           ACSG+P+TV ITD CPGG CAS+ VH DLSG A+GA+A  G AD LR  G++ + YKR  
Sbjct: 96  ACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAA 155

Query: 163 CNYPDTFINFIVDSGSNPNYLALLIEYEDGDGDLGSVDLKQDSSASWIPMTQSWGAVWKL 222
           C Y  T I F +D+G+NP Y++ ++EYE+GDGDL +V++ Q +  S+I M +   AVWK+
Sbjct: 156 CLYRGTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEI-QPAGGSFISMQEMRSAVWKV 215

Query: 223 DFGSPLQPPFSLRLTTLDSAKTLVATNVIPIGWQPGQTYTSLVNF 267
           + GS L+ PF++RLT+ +S K +VA NVIP  W+P ++Y S+VNF
Sbjct: 216 NSGSALRGPFNIRLTSGESHKVIVAYNVIPANWKPDESYRSIVNF 259

[Close]

BLAST of Sed0012439 vs. TAIR 10
Match: AT4G28250.1 (expansin B3 )

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-61
Identity = 111/231 (48.05%), Postives = 153/231 (66.23%), Query Frame = 0


Query: 37  SSDWSPAVATWYGSPHGAGSDGGSCGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEV 96
           +S W PAVATWYGSP+G GSDGG+CGYGT V+  P  + + A  P L+ +G+ CGACY+V
Sbjct: 33  NSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKV 92

Query: 97  KC-ELDACSGNPVTVVITDSCPGGSCASDKVHFDLSGTALGAMATTGLADHLRDLGILHI 156
           +C +   CS   VTV+ITD CPG  C+    HFDLSG   G +A  G +  LR+ G++ +
Sbjct: 93  RCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPV 152

Query: 157 QYKRVECNYPDTFINFIVDSGSNPNYLALLIEYEDGDGDLGSVDLKQDSSASWIPMTQSW 216
            Y+R  C Y    I F V+ GS   +L+LL+E+EDG+GD+GS+ ++Q  +  W+ M   W
Sbjct: 153 IYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVW 212

Query: 217 GAVWKLDFGSPLQPPFSLRLTTLDSAKTLVATNVIPIGWQPGQTYTSLVNF 267
           GA W +  G PL+ PFS++LTTL + KTL AT+V+P  W P  TY+S +NF
Sbjct: 213 GANWCI-IGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLNF 260

[Close]

BLAST of Sed0012439 vs. TAIR 10
Match: AT1G65681.1 (beta expansin 6 )

HSP 1 Score: 232.6 bits (592), Expect = 3.6e-61
Identity = 108/215 (50.23%), Postives = 150/215 (69.77%), Query Frame = 0


Query: 53  GAGSDGGSCGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKCE-LDACSGNPVTVV 112
           GAGS GG+CG+  AV   P + +++AGGPS++N+G  CG C+++ C    ACS  P+TV 
Sbjct: 11  GAGSTGGACGF--AVANPPLYGMVSAGGPSVFNNGIGCGTCFQILCNGHPACSRRPITVT 70

Query: 113 ITDSCPGGSCASDKVHFDLSGTALGAMATTGLADHLRDLGILHIQYKRVECNYPDTFINF 172
           ITD CPGG CAS+  HFDLSG A+GA+A  G  D LR  G+L + Y+RVEC Y  T I F
Sbjct: 71  ITDECPGGPCASEPAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYRRVECLYRRTNIAF 130

Query: 173 IVDSGSNPNYLALLIEYEDGDGDLGSVDLKQDSSASWIPMTQSWGAVWKLDFGSPLQPPF 232
            +D G+NP Y++ ++EYE+GDGDL  +++ Q +   +IPM +   AVWK+  GSPL  PF
Sbjct: 131 RMDPGANPYYISFVVEYENGDGDLAYIEI-QPADGEFIPMQEMRSAVWKISSGSPLTGPF 190

Query: 233 SLRLTTLDSAKTLVATNVIPIGWQPGQTYTSLVNF 267
           ++RLT+ +S K ++A NVIP  W+P +TY S+VNF
Sbjct: 191 NIRLTSAESHKVVLAYNVIPANWKPNETYRSVVNF 222

[Close]

BLAST of Sed0012439 vs. TAIR 10
Match: AT2G20750.1 (expansin B1 )

HSP 1 Score: 223.0 bits (567), Expect = 2.8e-58
Identity = 114/229 (49.78%), Postives = 147/229 (64.19%), Query Frame = 0


Query: 40  WSPAVATWYGSPHGAGSDGGSCGYGTAVEKAPFWSLIAAGGPSLYNSGKACGACYEVKC- 99
           W PA ATWYGS  G GS GG+CGYG+ V+  PF + + A  P L+  G+ CGACY+V+C 
Sbjct: 40  WLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCL 99

Query: 100 ELDACSGNPVTVVITDSCPGGSCASDK-VHFDLSGTALGAMATTGLADHLRDLGILHIQY 159
           +   CS   VT++ TD  P G  A  K  HFDLSG A G MA  G    +R+ G+L+I Y
Sbjct: 100 DKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILY 159

Query: 160 KRVECNYPDTFINFIVDSGSNPNYLALLIEYEDGDGDLGSVDLKQDSSASWIPMTQSWGA 219
           +R  C Y    I F V++GS   +L+LLIEYEDG+GD+GS+ ++Q  S  WI M   WGA
Sbjct: 160 RRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGA 219

Query: 220 VWKLDFGSPLQPPFSLRLTTLDSAKTLVATNVIPIGWQPGQTYTSLVNF 267
            W +  G PL+ PFS++LTTL + KTL AT+VIP  W P  TYTS +NF
Sbjct: 220 NWCIVEG-PLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNF 267

The following BLAST results are available for this feature:

BLAST of Sed0012439 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924767.1	6.7e-110	75.00	putative expansin-B2 [Cucurbita moschata]	[more]
XP_023528384.1	3.3e-109	74.63	putative expansin-B2 [Cucurbita pepo subsp. pepo]	[more]
XP_038876740.1	1.8e-107	75.94	putative expansin-B2 [Benincasa hispida]	[more]
XP_022151532.1	4.5e-106	74.07	putative expansin-B2 isoform X2 [Momordica charantia]	[more]
XP_022979601.1	2.9e-105	73.16	putative expansin-B2 [Cucurbita maxima]	[more]

BLAST of Sed0012439 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5W6Z9	2.8e-82	59.46	Expansin-B18 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB18 PE=2 SV=1	[more]
Q7XT40	2.3e-81	62.10	Expansin-B15 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB15 PE=3 SV=2	[more]
Q9SHY6	4.4e-80	56.62	Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2	[more]
Q6H676	6.6e-76	59.00	Expansin-B11 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB11 PE=2 SV=1	[more]
Q6H677	2.0e-72	59.15	Putative expansin-B14 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB14 PE=3 SV...	[more]

BLAST of Sed0012439 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E9X0	3.2e-110	75.00	putative expansin-B2 OS=Cucurbita moschata OX=3662 GN=LOC111432169 PE=3 SV=1	[more]
A0A6J1DDS1	2.2e-106	74.07	putative expansin-B2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019444 P...	[more]
A0A6J1IR92	1.4e-105	73.16	putative expansin-B2 OS=Cucurbita maxima OX=3661 GN=LOC111479279 PE=3 SV=1	[more]
A0A1S3AUH4	3.1e-105	73.13	putative expansin-B2 OS=Cucumis melo OX=3656 GN=LOC103483118 PE=3 SV=1	[more]
A0A0A0L8B4	9.1e-105	73.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117420 PE=3 SV=1	[more]

BLAST of Sed0012439 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65680.1	3.1e-81	56.62	expansin B2	[more]
AT2G45110.1	3.6e-69	53.33	expansin B4	[more]
AT4G28250.1	1.2e-61	48.05	expansin B3	[more]
AT1G65681.1	3.6e-61	50.23	beta expansin 6	[more]
AT2G20750.1	2.8e-58	49.78	expansin B1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 150..166 score: 36.18 coord: 39..54 score: 42.66 coord: 57..75 score: 31.18 coord: 208..222 score: 41.83 coord: 80..98 score: 47.37 coord: 248..262 score: 49.0
IPR005795	Major pollen allergen Lol pI	PRINTS	PR00829	LOLP1ALLERGN	coord: 78..89 score: 22.73 coord: 217..234 score: 43.43 coord: 117..132 score: 36.36 coord: 171..186 score: 68.75 coord: 187..202 score: 44.89 coord: 139..154 score: 39.2
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 76..157 e-value: 1.2E-5 score: 34.7
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 58..167 score: 29.123192
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 77..157 e-value: 1.9E-16 score: 60.1
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 26..163 e-value: 8.3E-44 score: 151.0
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 39..187
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 169..251 e-value: 8.3E-28 score: 96.2
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 180..262 score: 26.377871
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 165..266 e-value: 2.6E-35 score: 122.3
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 169..262
None	No IPR available	PANTHER	PTHR31692:SF57	EXPANSIN-B2-RELATED	coord: 23..267
None	No IPR available	PANTHER	PTHR31692	EXPANSIN-B3	coord: 23..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012439.1	Sed0012439.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0019953	sexual reproduction
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0019901	protein kinase binding