Sed0012314 (gene) Chayote v1

Overview


Name	Sed0012314
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Epidermal patterning factor-like protein
Location	LG04: 43597458 .. 43598815 (-)
RNA-Seq Expression	Sed0012314
Synteny	Sed0012314

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATCTGTTTATAAGTGTTGATTAGTTAGAACCCTATTGAAAAGGAACCTCTTTTCTTGTGTTTTTGCTCTAAAACCATGAAGGGTTTGGCTTGGTTTTCTCTTTTTCTCATTGGTTTCTTGTTGTTTCCAAATCCCACTTCGTCCAGACGCATTACTGAGCAAAATTCACGTAATGATTACACTTTCCTTTCTTGTTTCTTCTTTTTGTGCACAACTTTTATCAAGTTCTAACTTCTTTTTATTAGATATTCAATATCTTATTAACAATACGAAAAATACTTCTTCTTTTTTAAACCAAGTAGTTATCTTACTAAGAATGTGAGGTTTCTAGCTTTTTCTAATGAGAATCCTCAATTTGTCATCTCAATATGGTAACTTTTTTGTGTTAAATTAATTGGTAATGTGAGAATTTGGGTTGTACATTTTACTGAAAGTGTGCAACTTCTCAATCTTTCCAATCATGTGATCTCACCACTTCTTATGGAAGCAAAATTAGAGAAAAGATTGTAAACTTTGTGTGTGCCTTTCAAGTAGATAGTTTAGAAAATCTTAAATAAAGAAAGTTATGTGACAGAGCAAGGATATGTTGGGAATTGGAGAGTGTGAATATGGAGTACCATGAATTTTATCTTTGACAATATTTTAGCTAGTCTATATATCTTATAAAGATTGTAAGTTCTCTAAATTGTTCGATAAACATTAGGTTTGACAAATTCATTGAATGAATATGAATTTAATATCTTAAATCAAATCTATTCGAGTCTAAAATCCTCGCTCAACCCCTTTCTTTCTCACTTCACAATTATCTATTCCTTCCTTCTTCGCTTAGCCATAGACTTATCTGGCTCATGCGCGTGTGCAGGTCATGGCCACCACCACAAGGCAGCAACTAGCTTAGCCAAAGACGACAAGGTAGCGGTAATAGCAGCATCAATGAAACAAAAGTCTTATTGGCCGGAAAATAAGGCGGCCACCACAACCACGACCGGGAGAAAAAGTGTGGACACAGTTGAATTAGCCGGGTCGAGGTTGCCGGATTGTTCGCATGCGTGTGGCTCATGCTCGCCGTGCAGACTAGTGATGATAAGCTTTGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGTAATAATAAGTCCTATCCTGTTCCTTGATCCAAATTATATTCCAAACCCTTTCCTTAATCACTTTTGTAAAAATGTGTTAACTGTACCCCCCATGTCTTATTTCTGTTAGTTTTTAGGGCTTTTCTTTCTTCTTTTTGCTCCGAGTTAGAGTTGTAATCAGAGAGTTTCTAGCAACATTTTCTTAACTTTTTAGATAGGTTTTGGGG

mRNA sequence

TTTATCTGTTTATAAGTGTTGATTAGTTAGAACCCTATTGAAAAGGAACCTCTTTTCTTGTGTTTTTGCTCTAAAACCATGAAGGGTTTGGCTTGGTTTTCTCTTTTTCTCATTGGTTTCTTGTTGTTTCCAAATCCCACTTCGTCCAGACGCATTACTGAGCAAAATTCACGTCATGGCCACCACCACAAGGCAGCAACTAGCTTAGCCAAAGACGACAAGGTAGCGGTAATAGCAGCATCAATGAAACAAAAGTCTTATTGGCCGGAAAATAAGGCGGCCACCACAACCACGACCGGGAGAAAAAGTGTGGACACAGTTGAATTAGCCGGGTCGAGGTTGCCGGATTGTTCGCATGCGTGTGGCTCATGCTCGCCGTGCAGACTAGTGATGATAAGCTTTGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGTAATAATAAGTCCTATCCTGTTCCTTGATCCAAATTATATTCCAAACCCTTTCCTTAATCACTTTTGTAAAAATGTGTTAACTGTACCCCCCATGTCTTATTTCTGTTAGTTTTTAGGGCTTTTCTTTCTTCTTTTTGCTCCGAGTTAGAGTTGTAATCAGAGAGTTTCTAGCAACATTTTCTTAACTTTTTAGATAGGTTTTGGGG

Coding sequence (CDS)

ATGAAGGGTTTGGCTTGGTTTTCTCTTTTTCTCATTGGTTTCTTGTTGTTTCCAAATCCCACTTCGTCCAGACGCATTACTGAGCAAAATTCACGTCATGGCCACCACCACAAGGCAGCAACTAGCTTAGCCAAAGACGACAAGGTAGCGGTAATAGCAGCATCAATGAAACAAAAGTCTTATTGGCCGGAAAATAAGGCGGCCACCACAACCACGACCGGGAGAAAAAGTGTGGACACAGTTGAATTAGCCGGGTCGAGGTTGCCGGATTGTTCGCATGCGTGTGGCTCATGCTCGCCGTGCAGACTAGTGATGATAAGCTTTGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGTAATAATAAGTCCTATCCTGTTCCTTGA

Protein sequence

MKGLAWFSLFLIGFLLFPNPTSSRRITEQNSRHGHHHKAATSLAKDDKVAVIAASMKQKSYWPENKAATTTTTGRKSVDTVELAGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

Homology

[Close]

BLAST of Sed0012314 vs. NCBI nr
Match: XP_022930814.1 (uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 uncharacterized protein LOC111793854 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.0 bits (476), Expect = 5.5e-44
Identity = 95/135 (70.37%), Postives = 102/135 (75.56%), Query Frame = 0


Query: 1   MKGLAWFSLFLIGFLLFPNPTSSRRITEQNSRHGHHHKAATSLAKDDKVAVIAASMKQKS 60
           MKGL  FSL  I FLLFP P SSRRI++ NSR GHHHKAA      D V  + A+ K KS
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAV-----DSVRAVEAA-KGKS 60

Query: 61  YWPENKAATTTTTGRKSVDTVELAGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120
           YWP  KA      GRK  +TVE+AGS LPDCSHACGSCSPCRLVMISFVCA+L EAETCP
Sbjct: 61  YWPVTKAVAAAVMGRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCP 120

Query: 121 MAYRCMCNNKSYPVP 136
           MAYRCMCNNKSYPVP
Sbjct: 121 MAYRCMCNNKSYPVP 129

[Close]

BLAST of Sed0012314 vs. NCBI nr
Match: XP_022989012.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Cucurbita maxima])

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-40
Identity = 92/135 (68.15%), Postives = 99/135 (73.33%), Query Frame = 0


Query: 1   MKGLAWFSLFLIGFLLFPNPTSSRRITEQNSRHGHHHKAATSLAKDDKVAVIAASMKQKS 60
           MKGL  FSL  I FLLFP P SSRRI++ NSR GHHHKAA      D V  + A+ KQ S
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAV-----DSVRAVEAA-KQNS 60

Query: 61  YWPENKAATTTTTGRKSVDTVELAGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120
           YWP           RK  +TVE+AGS LPDCSHACGSCSPCRLVMISFVCA+L EAETCP
Sbjct: 61  YWP--------ALWRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCP 120

Query: 121 MAYRCMCNNKSYPVP 136
           MAYRCMCNNKSYPVP
Sbjct: 121 MAYRCMCNNKSYPVP 121

[Close]

BLAST of Sed0012314 vs. NCBI nr
Match: XP_038888568.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida])

HSP 1 Score: 176.0 bits (445), Expect = 2.2e-40
Identity = 87/135 (64.44%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 1   MKGLAWFSLFLIGFLLFPNPTSSRRITEQNSRHGHHHKAATSLAKDDKVAVIAASMKQKS 60
           M    WFS+  I F LFP P SSR I+++NS HGHH K AT+            ++K+K 
Sbjct: 1   MNPSTWFSILFIAFFLFPTPISSRHISQRNSHHGHHRKMATT------------TVKEKL 60

Query: 61  YWPENKAATTTTTGRKSVDTVELAGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120
           Y PE KA      GRK  DTVE+AGS LPDCSHACGSCSPCRLVMISFVCASLQEAETCP
Sbjct: 61  YSPEKKA----VIGRKGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 119

Query: 121 MAYRCMCNNKSYPVP 136
           MAYRCMCNNKSYP+P
Sbjct: 121 MAYRCMCNNKSYPIP 119

[Close]

BLAST of Sed0012314 vs. NCBI nr
Match: XP_004136818.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical protein Csa_020445 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 1.4e-39
Identity = 89/135 (65.93%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 1   MKGLAWFSLFLIGFLLFPNPTSSRRITEQNSRHGHHHKAATSLAKDDKVAVIAASMKQKS 60
           MK    FS+  I FLLF  P SSRRI++QNSRHGHH K A S     K A++        
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAAS--SSGKAAMVVV------ 60

Query: 61  YWPENKAATTTTTGRKSVDTVELAGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120
              + KAA  T  GRK  +TVE+AGS LPDCSHACGSCSPCRLVMISFVCASLQEAETCP
Sbjct: 61  ---KEKAAMMTRMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120

Query: 121 MAYRCMCNNKSYPVP 136
           MAYRCMCNNKSYPVP
Sbjct: 121 MAYRCMCNNKSYPVP 124

[Close]

BLAST of Sed0012314 vs. NCBI nr
Match: XP_008455333.1 (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo])

HSP 1 Score: 173.3 bits (438), Expect = 1.4e-39
Identity = 89/135 (65.93%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 1   MKGLAWFSLFLIGFLLFPNPTSSRRITEQNSRHGHHHKAATSLAKDDKVAVIAASMKQKS 60
           MK    FS+  IGFLL   P SSRRI++QNSRHGHH K A S  K   V V         
Sbjct: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVV--------- 60

Query: 61  YWPENKAATTTTTGRKSVDTVELAGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120
               N+  T  T GRK  +TVE+AGS LPDCSHACGSCSPCRLVMISFVCASLQEAETCP
Sbjct: 61  ----NEKVTMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120

Query: 121 MAYRCMCNNKSYPVP 136
           MAYRCMCNNKSYPVP
Sbjct: 121 MAYRCMCNNKSYPVP 122

[Close]

BLAST of Sed0012314 vs. ExPASy Swiss-Prot
Match: Q8S8I4 (Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.4e-26
Identity = 68/133 (51.13%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 4   LAWFSLFLIGFLLFPN-PTSSRRITEQNSRHGHHHKAATSLAKDDKVAVIAASMKQKSYW 63
           LA+F  F  G LL  + PTS        S   HHH   T   K                 
Sbjct: 7   LAFFLSFFFGSLLARHLPTS--------SHPSHHHVGMTGALKRQ--------------- 66

Query: 64  PENKAATTTTTGRKSVDTVELAGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMA 123
                       R+  DTV++AGSRLPDCSHACGSCSPCRLVM+SFVCAS++EAETCPMA
Sbjct: 67  ------------RRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMA 104

Query: 124 YRCMCNNKSYPVP 136
           Y+CMCNNKSYPVP
Sbjct: 127 YKCMCNNKSYPVP 104

[Close]

BLAST of Sed0012314 vs. ExPASy Swiss-Prot
Match: Q8LC53 (Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 85  GSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 136
           GS LPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Sbjct: 70  GSSLPDCSYACGACSPCKRVMISFECS---VAESCSVIYRCTCRGRYYHVP 117

[Close]

BLAST of Sed0012314 vs. ExPASy Swiss-Prot
Match: C4B8C5 (EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EPFL7 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-10
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 84  AGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 136
           +GS +PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Sbjct: 121 SGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

[Close]

BLAST of Sed0012314 vs. ExPASy TrEMBL
Match: A0A6J1ESJ9 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111437184 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.7e-44
Identity = 95/135 (70.37%), Postives = 102/135 (75.56%), Query Frame = 0


Query: 1   MKGLAWFSLFLIGFLLFPNPTSSRRITEQNSRHGHHHKAATSLAKDDKVAVIAASMKQKS 60
           MKGL  FSL  I FLLFP P SSRRI++ NSR GHHHKAA      D V  + A+ K KS
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAV-----DSVRAVEAA-KGKS 60

Query: 61  YWPENKAATTTTTGRKSVDTVELAGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120
           YWP  KA      GRK  +TVE+AGS LPDCSHACGSCSPCRLVMISFVCA+L EAETCP
Sbjct: 61  YWPVTKAVAAAVMGRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCP 120

Query: 121 MAYRCMCNNKSYPVP 136
           MAYRCMCNNKSYPVP
Sbjct: 121 MAYRCMCNNKSYPVP 129

[Close]

BLAST of Sed0012314 vs. ExPASy TrEMBL
Match: A0A6J1JEL1 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486204 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 6.1e-41
Identity = 92/135 (68.15%), Postives = 99/135 (73.33%), Query Frame = 0


Query: 1   MKGLAWFSLFLIGFLLFPNPTSSRRITEQNSRHGHHHKAATSLAKDDKVAVIAASMKQKS 60
           MKGL  FSL  I FLLFP P SSRRI++ NSR GHHHKAA      D V  + A+ KQ S
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAV-----DSVRAVEAA-KQNS 60

Query: 61  YWPENKAATTTTTGRKSVDTVELAGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120
           YWP           RK  +TVE+AGS LPDCSHACGSCSPCRLVMISFVCA+L EAETCP
Sbjct: 61  YWP--------ALWRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCP 120

Query: 121 MAYRCMCNNKSYPVP 136
           MAYRCMCNNKSYPVP
Sbjct: 121 MAYRCMCNNKSYPVP 121

[Close]

BLAST of Sed0012314 vs. ExPASy TrEMBL
Match: A0A0A0K5P8 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047370 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 6.8e-40
Identity = 89/135 (65.93%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 1   MKGLAWFSLFLIGFLLFPNPTSSRRITEQNSRHGHHHKAATSLAKDDKVAVIAASMKQKS 60
           MK    FS+  I FLLF  P SSRRI++QNSRHGHH K A S     K A++        
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAAS--SSGKAAMVVV------ 60

Query: 61  YWPENKAATTTTTGRKSVDTVELAGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120
              + KAA  T  GRK  +TVE+AGS LPDCSHACGSCSPCRLVMISFVCASLQEAETCP
Sbjct: 61  ---KEKAAMMTRMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120

Query: 121 MAYRCMCNNKSYPVP 136
           MAYRCMCNNKSYPVP
Sbjct: 121 MAYRCMCNNKSYPVP 124

[Close]

BLAST of Sed0012314 vs. ExPASy TrEMBL
Match: A0A1S3C0N9 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 6.8e-40
Identity = 89/135 (65.93%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 1   MKGLAWFSLFLIGFLLFPNPTSSRRITEQNSRHGHHHKAATSLAKDDKVAVIAASMKQKS 60
           MK    FS+  IGFLL   P SSRRI++QNSRHGHH K A S  K   V V         
Sbjct: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVV--------- 60

Query: 61  YWPENKAATTTTTGRKSVDTVELAGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120
               N+  T  T GRK  +TVE+AGS LPDCSHACGSCSPCRLVMISFVCASLQEAETCP
Sbjct: 61  ----NEKVTMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120

Query: 121 MAYRCMCNNKSYPVP 136
           MAYRCMCNNKSYPVP
Sbjct: 121 MAYRCMCNNKSYPVP 122

[Close]

BLAST of Sed0012314 vs. ExPASy TrEMBL
Match: A0A6J1GMI9 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455631 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 4.0e-32
Identity = 76/135 (56.30%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 1   MKGLAWFSLFLIGFLLFPNPTSSRRITEQNSRHGHHHKAATSLAKDDKVAVIAASMKQKS 60
           MKG  WFS+  I FLLFP P SS+RI+ QNS+                            
Sbjct: 1   MKGSTWFSIIFIAFLLFPTPISSQRISHQNSQE--------------------------- 60

Query: 61  YWPENKAATTTTTGRKSVDTVELAGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCP 120
                        GRK V+TVE+AGS LPDCSHAC SCSPCRLVMISFVCASLQEAETCP
Sbjct: 61  ----------AAMGRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCP 98

Query: 121 MAYRCMCNNKSYPVP 136
           MAYRCMCNNKSYP+P
Sbjct: 121 MAYRCMCNNKSYPLP 98

[Close]

BLAST of Sed0012314 vs. TAIR 10
Match: AT2G20875.1 (epidermal patterning factor 1 )

HSP 1 Score: 119.8 bits (299), Expect = 1.7e-27
Identity = 68/133 (51.13%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 4   LAWFSLFLIGFLLFPN-PTSSRRITEQNSRHGHHHKAATSLAKDDKVAVIAASMKQKSYW 63
           LA+F  F  G LL  + PTS        S   HHH   T   K                 
Sbjct: 7   LAFFLSFFFGSLLARHLPTS--------SHPSHHHVGMTGALKRQ--------------- 66

Query: 64  PENKAATTTTTGRKSVDTVELAGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMA 123
                       R+  DTV++AGSRLPDCSHACGSCSPCRLVM+SFVCAS++EAETCPMA
Sbjct: 67  ------------RRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMA 104

Query: 124 YRCMCNNKSYPVP 136
           Y+CMCNNKSYPVP
Sbjct: 127 YKCMCNNKSYPVP 104

[Close]

BLAST of Sed0012314 vs. TAIR 10
Match: AT1G34245.1 (Putative membrane lipoprotein )

HSP 1 Score: 67.4 bits (163), Expect = 1.0e-11
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 85  GSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 136
           GS LPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Sbjct: 70  GSSLPDCSYACGACSPCKRVMISFECS---VAESCSVIYRCTCRGRYYHVP 117

[Close]

BLAST of Sed0012314 vs. TAIR 10
Match: AT1G71866.1 (LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Putative membrane lipoprotein (TAIR:AT1G34245.1). )

HSP 1 Score: 66.6 bits (161), Expect = 1.7e-11
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 84  AGSRLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 136
           +GS +PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Sbjct: 121 SGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

The following BLAST results are available for this feature:

BLAST of Sed0012314 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930814.1	5.5e-44	70.37	uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 unchar...	[more]
XP_022989012.1	1.3e-40	68.15	protein EPIDERMAL PATTERNING FACTOR 1 [Cucurbita maxima]	[more]
XP_038888568.1	2.2e-40	64.44	protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida]	[more]
XP_004136818.1	1.4e-39	65.93	protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical...	[more]
XP_008455333.1	1.4e-39	65.93	PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]	[more]

BLAST of Sed0012314 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8I4	2.4e-26	51.13	Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE...	[more]
Q8LC53	1.4e-10	58.82	Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE...	[more]
C4B8C5	2.4e-10	51.92	EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of Sed0012314 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESJ9	2.7e-44	70.37	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JEL1	6.1e-41	68.15	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A0A0K5P8	6.8e-40	65.93	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047...	[more]
A0A1S3C0N9	6.8e-40	65.93	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522...	[more]
A0A6J1GMI9	4.0e-32	56.30	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Sed0012314 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20875.1	1.7e-27	51.13	epidermal patterning factor 1	[more]
AT1G34245.1	1.0e-11	58.82	Putative membrane lipoprotein	[more]
AT1G71866.1	1.7e-11	51.92	LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Put...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 84..133 e-value: 3.7E-15 score: 55.6
None	No IPR available	PANTHER	PTHR33109:SF41	PROTEIN EPIDERMAL PATTERNING FACTOR 1	coord: 8..135
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 8..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012314.1	Sed0012314.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development