Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAAAATAACCAAATGGAAACCAAGTTGAAGAAGGTTACAGAGGAAGTTCAGAAGACCCCAGCAATGGAGAAGAAGAACGAAGAAGAAGCGAAACCAAAGCGACGCCTACCCGAAGCCATAGCCAACCGGATGCTGGAGTTTCCTCTCTTCCATGGAACCGATGCGCCCACCTGGATCTTGAAAATAGAGCTCCACTTCAAATTTCACGCCATGGACGACTTTCCCACCATGATCGATGTCATCGCACTCTCTATGTCCGGCCAGGCCTTATACTGGTTCCGATGCCTCGAAAACCAGAATCAAATGCCGAAATCGTGGAATGAGTTTCGCCATGCTCTGTTCGAGCGATTTGAAGGCGGCGACACCATGTGTGAACGGTTCATTGCGTTGCAGCAACATGGGACCGTGAGGGAGTATTGCAGCCAGTTCGAGTTGTACGGGGCGCTCCTTCCAGACATTCCTGACTCCGTTCTTCGAGCCAAGTTTATGAACGGCTTACACGCACTCATTCGCGCCGAGGTCCGGGTGTTCCAGCCAAAGCACATACGAGACATGATGAAAACGGCGAGGTTGGTGGAAGATAAGAACCTCGCCTCGACGAGCCTACCCGTCGGAGATGCATTGCGTCATACCATGAAACTTGGAGCCACCATCGACGGGAAGCCCGTGGTTGTTAAGGTCGACAGTGGGGAAACTCATAATTTCATATCCCGAAATTTGGCTAAGGATTTGAAGCTCCCAGTGGACGACTACGGCATCAGCAGTGTGGTTTTGGGTTCCGGGAAGGCCATCAAAGTAGATGAAGTTTTTCGCGGCGTGCTGCTGCGAATCCAGAATCTAACGTTTGTGGAGGACTGTTTGCCGATTGAAATGGAAGGGGATTTTGAGGTCATATTGGGAATGCCGTGGCTGCGTGGCATGGAAGTTGATTGGAAAGCTCGAACCATGAACATGAATTTGGGGGAAAAGACTGTAACATTTCAGGGAGACCCATTTCTCTGA
mRNA sequence
ATGGAAAAAAATAACCAAATGGAAACCAAGTTGAAGAAGGTTACAGAGGAAGTTCAGAAGACCCCAGCAATGGAGAAGAAGAACGAAGAAGAAGCGAAACCAAAGCGACGCCTACCCGAAGCCATAGCCAACCGGATGCTGGAGTTTCCTCTCTTCCATGGAACCGATGCGCCCACCTGGATCTTGAAAATAGAGCTCCACTTCAAATTTCACGCCATGGACGACTTTCCCACCATGATCGATGTCATCGCACTCTCTATGTCCGGCCAGGCCTTATACTGGTTCCGATGCCTCGAAAACCAGAATCAAATGCCGAAATCGTGGAATGAGTTTCGCCATGCTCTGTTCGAGCGATTTGAAGGCGGCGACACCATGTGTGAACGGTTCATTGCGTTGCAGCAACATGGGACCGTGAGGGAGTATTGCAGCCAGTTCGAGTTGTACGGGGCGCTCCTTCCAGACATTCCTGACTCCGTTCTTCGAGCCAAGTTTATGAACGGCTTACACGCACTCATTCGCGCCGAGGTCCGGGTGTTCCAGCCAAAGCACATACGAGACATGATGAAAACGGCGAGGTTGGTGGAAGATAAGAACCTCGCCTCGACGAGCCTACCCGTCGGAGATGCATTGCGTCATACCATGAAACTTGGAGCCACCATCGACGGGAAGCCCGTGGTTGTTAAGGTCGACAGTGGGGAAACTCATAATTTCATATCCCGAAATTTGGCTAAGGATTTGAAGCTCCCAGTGGACGACTACGGCATCAGCAGTGTGGTTTTGGGTTCCGGGAAGGCCATCAAAGTAGATGAAGTTTTTCGCGGCGTGCTGCTGCGAATCCAGAATCTAACGTTTGTGGAGGACTGTTTGCCGATTGAAATGGAAGGGGATTTTGAGGTCATATTGGGAATGCCGTGGCTGCGTGGCATGGAAGTTGATTGGAAAGCTCGAACCATGAACATGAATTTGGGGGAAAAGACTGTAACATTTCAGGGAGACCCATTTCTCTGA
Coding sequence (CDS)
ATGGAAAAAAATAACCAAATGGAAACCAAGTTGAAGAAGGTTACAGAGGAAGTTCAGAAGACCCCAGCAATGGAGAAGAAGAACGAAGAAGAAGCGAAACCAAAGCGACGCCTACCCGAAGCCATAGCCAACCGGATGCTGGAGTTTCCTCTCTTCCATGGAACCGATGCGCCCACCTGGATCTTGAAAATAGAGCTCCACTTCAAATTTCACGCCATGGACGACTTTCCCACCATGATCGATGTCATCGCACTCTCTATGTCCGGCCAGGCCTTATACTGGTTCCGATGCCTCGAAAACCAGAATCAAATGCCGAAATCGTGGAATGAGTTTCGCCATGCTCTGTTCGAGCGATTTGAAGGCGGCGACACCATGTGTGAACGGTTCATTGCGTTGCAGCAACATGGGACCGTGAGGGAGTATTGCAGCCAGTTCGAGTTGTACGGGGCGCTCCTTCCAGACATTCCTGACTCCGTTCTTCGAGCCAAGTTTATGAACGGCTTACACGCACTCATTCGCGCCGAGGTCCGGGTGTTCCAGCCAAAGCACATACGAGACATGATGAAAACGGCGAGGTTGGTGGAAGATAAGAACCTCGCCTCGACGAGCCTACCCGTCGGAGATGCATTGCGTCATACCATGAAACTTGGAGCCACCATCGACGGGAAGCCCGTGGTTGTTAAGGTCGACAGTGGGGAAACTCATAATTTCATATCCCGAAATTTGGCTAAGGATTTGAAGCTCCCAGTGGACGACTACGGCATCAGCAGTGTGGTTTTGGGTTCCGGGAAGGCCATCAAAGTAGATGAAGTTTTTCGCGGCGTGCTGCTGCGAATCCAGAATCTAACGTTTGTGGAGGACTGTTTGCCGATTGAAATGGAAGGGGATTTTGAGGTCATATTGGGAATGCCGTGGCTGCGTGGCATGGAAGTTGATTGGAAAGCTCGAACCATGAACATGAATTTGGGGGAAAAGACTGTAACATTTCAGGGAGACCCATTTCTCTGA
Protein sequence
MEKNNQMETKLKKVTEEVQKTPAMEKKNEEEAKPKRRLPEAIANRMLEFPLFHGTDAPTWILKIELHFKFHAMDDFPTMIDVIALSMSGQALYWFRCLENQNQMPKSWNEFRHALFERFEGGDTMCERFIALQQHGTVREYCSQFELYGALLPDIPDSVLRAKFMNGLHALIRAEVRVFQPKHIRDMMKTARLVEDKNLASTSLPVGDALRHTMKLGATIDGKPVVVKVDSGETHNFISRNLAKDLKLPVDDYGISSVVLGSGKAIKVDEVFRGVLLRIQNLTFVEDCLPIEMEGDFEVILGMPWLRGMEVDWKARTMNMNLGEKTVTFQGDPFL
Homology
BLAST of Sed0012281 vs. NCBI nr
Match:
KAA0056890.1 (aminoacyl-tRNA ligase [Cucumis melo var. makuwa] >TYJ99393.1 aminoacyl-tRNA ligase [Cucumis melo var. makuwa])
HSP 1 Score: 281.2 bits (718), Expect = 1.2e-71
Identity = 162/347 (46.69%), Postives = 209/347 (60.23%), Query Frame = 0
Query: 7 METKLKKV-TEEVQKTPAMEKKN--------------EEEAKPKRRLPEAIANRMLEFPL 66
++ KLKKV EEV P N ++ P+ + N LE P+
Sbjct: 8 LDAKLKKVEDEEVHNIPTTHDNNLTTLMHQMALLLNGHQQCLPQYAPTHRMPN--LELPM 67
Query: 67 FHGTDAPTWILKIELHFKFHAMDDFPTMIDVIALSMSGQALYWFRCLENQNQMPKSWNEF 126
F GTD WILK+E +F+ H +DD M+D I L MSGQAL WFRC +N + P+SW+EF
Sbjct: 68 FDGTDTLMWILKMERYFEVHHIDDIARMMDTILLCMSGQALAWFRCFQNWGKPPESWDEF 127
Query: 127 RHALFERFEGGDTMCERFIALQQHGTVREYCSQFELYGALLPDIPDSVLRAKFMNGLHAL 186
R +L+ RF +C +F+ L+Q G+V EYCS+FE GALLP++ VL AKFMNGL
Sbjct: 128 RDSLYMRFGDARNVCSKFLGLEQEGSVEEYCSKFETLGALLPELQHVVLEAKFMNGLKTE 187
Query: 187 IRAEVRVFQPKHIRDMMKTARLVEDKNLASTSLPVGDALRHTMKLGATIDGKPVVVKVDS 246
IR +VR+ PK I D+M ARL E KN AL T + G T+ + V+VKV S
Sbjct: 188 IREDVRMLHPKDILDIMHRARLGEKKN--------NVALNSTKRKG-TVKERSVIVKVVS 247
Query: 247 GETHNFISRNLAKDLKLPVDDYGISSVVLGSGKAIKVDEVFRGVLLRIQNLTFVEDCLPI 306
+N IS+NLA DLKL +D YG SVVLGSGK +K D + RGVLL+I N T+VED P+
Sbjct: 248 WTDYNLISKNLATDLKLKLDMYGDYSVVLGSGKKVKGDGICRGVLLQIGNDTYVEDFFPL 307
Query: 307 EMEGDFEVILGMPWLRG---MEVDWKARTMNMNLGEKTVTFQGDPFL 336
+M D EVILG WL MEVDWK M + +G++TVT + DPFL
Sbjct: 308 QMGEDDEVILGNLWLVALGKMEVDWKNLPMKLKVGKETVTLRKDPFL 343
BLAST of Sed0012281 vs. NCBI nr
Match:
KAE8652678.1 (hypothetical protein Csa_013756 [Cucumis sativus])
HSP 1 Score: 275.8 bits (704), Expect = 5.0e-70
Identity = 162/344 (47.09%), Postives = 207/344 (60.17%), Query Frame = 0
Query: 7 METKLKKV-TEEVQKTPAMEKKNEE---------EAKPKRRLPEAIANRM--LEFPLFHG 66
+E KLKKV EEV P + + A +R L A +RM LE P+F G
Sbjct: 8 LEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNAHQQRLLQYAPTHRMPNLELPMFDG 67
Query: 67 TDAPTWILKIELHFKFHAMDDFPTMIDVIALSMSGQALYWFRCLENQNQMPKSWNEFRHA 126
TD WILK+E +F+ H +DD M++ I L MSGQAL WFRC +N P+SW EFR +
Sbjct: 68 TDTLMWILKMERYFEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPESWGEFRGS 127
Query: 127 LFERFEGGDTMCERFIALQQHGTVREYCSQFELYGALLPDIPDSVLRAKFMNGLHALIRA 186
L++RF G + RFI LQQ G+V EYCS+FE GALLP++ V+ AKFMNGL IR
Sbjct: 128 LYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNGLKTEIRG 187
Query: 187 EVRVFQPKHIRDMMKTARLVEDKNLASTSLPVGDALRHTMKLGATIDGKPVVVKVDSGET 246
EVR+ + I D+M ARL E KN + ++ K T+ + VVVKV S
Sbjct: 188 EVRMLDTEGILDIMHRARLAEIKN---------NVAFNSTKRKGTVKERSVVVKVVSWTD 247
Query: 247 HNFISRNLAKDLKLPVDDYGISSVVLGSGKAIKVDEVFRGVLLRIQNLTFVEDCLPIEME 306
+N IS+NLA DLKL +D YG SVVLGSGK +K D + RGVLL+I N T+ ED P++M
Sbjct: 248 YNLISKNLATDLKLKLDMYGDYSVVLGSGKTVKGDGICRGVLLQIGNETYAEDFFPLQMG 307
Query: 307 GDFEVILGMPW---LRGMEVDWKARTMNMNLGEKTVTFQGDPFL 336
D EVILG W L MEVDWK TM + +G++ VT + DP L
Sbjct: 308 EDDEVILGNLWLVDLGKMEVDWKNLTMKLEVGKEIVTLRKDPSL 342
BLAST of Sed0012281 vs. NCBI nr
Match:
XP_016900762.1 (PREDICTED: uncharacterized protein LOC107991016 [Cucumis melo])
HSP 1 Score: 262.3 bits (669), Expect = 5.7e-66
Identity = 154/332 (46.39%), Postives = 197/332 (59.34%), Query Frame = 0
Query: 7 METKLKKV-TEEVQKTPAMEKKN--------------EEEAKPKRRLPEAIANRMLEFPL 66
++ KLKKV EEV P N ++ P+ + N LE P+
Sbjct: 8 LDAKLKKVEDEEVHNIPTTHDNNLTTLMHQMALLLNGHQQCLPQYAPTHRMPN--LELPM 67
Query: 67 FHGTDAPTWILKIELHFKFHAMDDFPTMIDVIALSMSGQALYWFRCLENQNQMPKSWNEF 126
F GTD WILK+E +F+ H +DD M+D I L MSGQAL WFRC +N + P+SW+EF
Sbjct: 68 FDGTDTLMWILKMERYFEVHHIDDIARMMDTILLCMSGQALAWFRCFQNWGKPPESWDEF 127
Query: 127 RHALFERFEGGDTMCERFIALQQHGTVREYCSQFELYGALLPDIPDSVLRAKFMNGLHAL 186
R +L+ RF +C +F+ L+Q G+V EYCS+FE GALLP++ VL AKFMNGL
Sbjct: 128 RDSLYMRFGDARNVCSKFLGLEQEGSVEEYCSKFETLGALLPELQHVVLEAKFMNGLKTE 187
Query: 187 IRAEVRVFQPKHIRDMMKTARLVEDKNLASTSLPVGDALRHTMKLGATIDGKPVVVKVDS 246
IR +VR+ PK I D+M ARL E KN AL T + G T+ + V+VKV S
Sbjct: 188 IREDVRMLHPKDILDIMHRARLGEKKN--------NVALNSTKRKG-TVKERSVIVKVVS 247
Query: 247 GETHNFISRNLAKDLKLPVDDYGISSVVLGSGKAIKVDEVFRGVLLRIQNLTFVEDCLPI 306
+N IS+NLA DLKL +D YG SVVLGSGK +K D + RGVLL+I N T+VED P+
Sbjct: 248 WTDYNLISKNLATDLKLKLDMYGDYSVVLGSGKKVKGDGICRGVLLQIGNDTYVEDFFPL 307
Query: 307 EMEGDFEVILGMPWLRG---MEVDWKARTMNM 321
+M D EVILG WL MEVDWK M +
Sbjct: 308 QMGEDDEVILGNLWLVALGKMEVDWKNLPMKL 328
BLAST of Sed0012281 vs. NCBI nr
Match:
TYK06549.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 177.6 bits (449), Expect = 1.8e-40
Identity = 114/375 (30.40%), Postives = 186/375 (49.60%), Query Frame = 0
Query: 12 KKVTEEVQKTPAMEKKNEEEAKPKRRLPEAIANR----MLEFPLFHGTDAPTWILKIELH 71
+K + T + +++ + K EA A+R +E P+F G D +W+ + E +
Sbjct: 88 EKEANSSKSTVSGRSNSDDRNEGKTETEEAAADRNKFKKVEMPVFAGEDPDSWLFRAERY 147
Query: 72 FKFHAMDDFPTMIDVIALSMSGQALYWFRCLENQNQMPKSWNEFRHALFERFEGG--DTM 131
F+ H + D M+ V +S G AL W+R E + + SW + L RF + +
Sbjct: 148 FQIHKLSDSEKML-VSTISFDGPALNWYRSQEEREKF-TSWANLKERLLVRFRSSRDEKV 207
Query: 132 CERFIALQQHGTVREYCSQFELYGALLPDIPDSVLRAKFMNGLHALIRAEVRVFQPKHIR 191
ERF+ ++Q TV +Y + F+ A L D+PD V++ FMNGL IRAEVR+ +PK +
Sbjct: 208 LERFLRVKQESTVDDYRNLFDKLVAPLSDVPDPVVKDTFMNGLFPWIRAEVRICRPKGLA 267
Query: 192 DMMKTARLVEDKNL----------------------------------ASTSLPV----- 251
+MM+ A+LVE++ + +T+ P+
Sbjct: 268 EMMEFAQLVENREIERNEVNLNNFAGGKYSQQNTVNNRTPANTNSDSKTNTNFPMRTITL 327
Query: 252 ---GDALRHTMKLGATIDGKPVVVKVDSGETHNFISRNLAKDLKLPVDDYGISSVVLGSG 311
+A TMK+ I + V++ +D G THNFIS L + L+LPV + G V+LGSG
Sbjct: 328 RSSNNAEICTMKVKGKIQEREVIILIDYGATHNFISEKLVESLQLPVKETGHYGVILGSG 387
Query: 312 KAIKVDEVFRGVLLRIQNLTFVEDCLPIEMEGDFEVILGMPWLRGM---EVDWKARTMNM 336
++ + V +++ N E+ LP+E+ G +V+LGM WL + VDWK T+
Sbjct: 388 TVVQGKGICENVEIQLSNWKVKEEFLPLEL-GGVDVVLGMQWLHSLGITVVDWKNLTLTF 447
BLAST of Sed0012281 vs. NCBI nr
Match:
KAA0037097.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 176.8 bits (447), Expect = 3.1e-40
Identity = 114/375 (30.40%), Postives = 185/375 (49.33%), Query Frame = 0
Query: 12 KKVTEEVQKTPAMEKKNEEEAKPKRRLPEAIANR----MLEFPLFHGTDAPTWILKIELH 71
+K + T + +++ + K EA A+R +E P+F G D +W+ + E +
Sbjct: 88 EKEANSSKSTVSGRSNSDDRNEGKTETEEAAADRNKFKKVEMPVFAGEDPDSWLFRAERY 147
Query: 72 FKFHAMDDFPTMIDVIALSMSGQALYWFRCLENQNQMPKSWNEFRHALFERFEGG--DTM 131
F+ H + D M+ V +S G AL W+R E + + SW + L RF + +
Sbjct: 148 FQIHKLSDSEKML-VSTISFDGPALNWYRSQEEREKF-TSWANLKERLLVRFRSSRDEKV 207
Query: 132 CERFIALQQHGTVREYCSQFELYGALLPDIPDSVLRAKFMNGLHALIRAEVRVFQPKHIR 191
ERF+ ++Q TV +Y + F+ A L D+PD V++ FMNGL IRAEVR+ +PK +
Sbjct: 208 LERFLRVKQESTVDDYRNLFDKLVAPLSDVPDPVVKDTFMNGLFPWIRAEVRICRPKGLA 267
Query: 192 DMMKTARLVEDKNL----------------------------------ASTSLPV----- 251
+MM+ A+LVE++ + +T+ P+
Sbjct: 268 EMMEFAQLVENREIERNEVNLNNFAGGKYSQQNTVNNRTPANTNSDSKTNTNFPMRTITL 327
Query: 252 ---GDALRHTMKLGATIDGKPVVVKVDSGETHNFISRNLAKDLKLPVDDYGISSVVLGSG 311
+A TMK+ I + V++ +D G THNFIS L + L+LPV + G V+LGSG
Sbjct: 328 RSSNNAEICTMKVKGKIQEREVIILIDYGATHNFISEKLVESLQLPVKETGHYGVILGSG 387
Query: 312 KAIKVDEVFRGVLLRIQNLTFVEDCLPIEMEGDFEVILGMPWLRGM---EVDWKARTMNM 336
++ + V +++ N E+ LP+E+ G +V+LGM WL + VDWK T+
Sbjct: 388 TVVQGKGICENVEIQLSNWKVKEEFLPLEL-GGVDVVLGMQWLHSLGITVVDWKNLTLTF 447
BLAST of Sed0012281 vs. ExPASy TrEMBL
Match:
A0A5D3BJD9 (Aminoacyl-tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006110 PE=4 SV=1)
HSP 1 Score: 281.2 bits (718), Expect = 5.7e-72
Identity = 162/347 (46.69%), Postives = 209/347 (60.23%), Query Frame = 0
Query: 7 METKLKKV-TEEVQKTPAMEKKN--------------EEEAKPKRRLPEAIANRMLEFPL 66
++ KLKKV EEV P N ++ P+ + N LE P+
Sbjct: 8 LDAKLKKVEDEEVHNIPTTHDNNLTTLMHQMALLLNGHQQCLPQYAPTHRMPN--LELPM 67
Query: 67 FHGTDAPTWILKIELHFKFHAMDDFPTMIDVIALSMSGQALYWFRCLENQNQMPKSWNEF 126
F GTD WILK+E +F+ H +DD M+D I L MSGQAL WFRC +N + P+SW+EF
Sbjct: 68 FDGTDTLMWILKMERYFEVHHIDDIARMMDTILLCMSGQALAWFRCFQNWGKPPESWDEF 127
Query: 127 RHALFERFEGGDTMCERFIALQQHGTVREYCSQFELYGALLPDIPDSVLRAKFMNGLHAL 186
R +L+ RF +C +F+ L+Q G+V EYCS+FE GALLP++ VL AKFMNGL
Sbjct: 128 RDSLYMRFGDARNVCSKFLGLEQEGSVEEYCSKFETLGALLPELQHVVLEAKFMNGLKTE 187
Query: 187 IRAEVRVFQPKHIRDMMKTARLVEDKNLASTSLPVGDALRHTMKLGATIDGKPVVVKVDS 246
IR +VR+ PK I D+M ARL E KN AL T + G T+ + V+VKV S
Sbjct: 188 IREDVRMLHPKDILDIMHRARLGEKKN--------NVALNSTKRKG-TVKERSVIVKVVS 247
Query: 247 GETHNFISRNLAKDLKLPVDDYGISSVVLGSGKAIKVDEVFRGVLLRIQNLTFVEDCLPI 306
+N IS+NLA DLKL +D YG SVVLGSGK +K D + RGVLL+I N T+VED P+
Sbjct: 248 WTDYNLISKNLATDLKLKLDMYGDYSVVLGSGKKVKGDGICRGVLLQIGNDTYVEDFFPL 307
Query: 307 EMEGDFEVILGMPWLRG---MEVDWKARTMNMNLGEKTVTFQGDPFL 336
+M D EVILG WL MEVDWK M + +G++TVT + DPFL
Sbjct: 308 QMGEDDEVILGNLWLVALGKMEVDWKNLPMKLKVGKETVTLRKDPFL 343
BLAST of Sed0012281 vs. ExPASy TrEMBL
Match:
A0A1S4DXQ7 (uncharacterized protein LOC107991016 OS=Cucumis melo OX=3656 GN=LOC107991016 PE=4 SV=1)
HSP 1 Score: 262.3 bits (669), Expect = 2.8e-66
Identity = 154/332 (46.39%), Postives = 197/332 (59.34%), Query Frame = 0
Query: 7 METKLKKV-TEEVQKTPAMEKKN--------------EEEAKPKRRLPEAIANRMLEFPL 66
++ KLKKV EEV P N ++ P+ + N LE P+
Sbjct: 8 LDAKLKKVEDEEVHNIPTTHDNNLTTLMHQMALLLNGHQQCLPQYAPTHRMPN--LELPM 67
Query: 67 FHGTDAPTWILKIELHFKFHAMDDFPTMIDVIALSMSGQALYWFRCLENQNQMPKSWNEF 126
F GTD WILK+E +F+ H +DD M+D I L MSGQAL WFRC +N + P+SW+EF
Sbjct: 68 FDGTDTLMWILKMERYFEVHHIDDIARMMDTILLCMSGQALAWFRCFQNWGKPPESWDEF 127
Query: 127 RHALFERFEGGDTMCERFIALQQHGTVREYCSQFELYGALLPDIPDSVLRAKFMNGLHAL 186
R +L+ RF +C +F+ L+Q G+V EYCS+FE GALLP++ VL AKFMNGL
Sbjct: 128 RDSLYMRFGDARNVCSKFLGLEQEGSVEEYCSKFETLGALLPELQHVVLEAKFMNGLKTE 187
Query: 187 IRAEVRVFQPKHIRDMMKTARLVEDKNLASTSLPVGDALRHTMKLGATIDGKPVVVKVDS 246
IR +VR+ PK I D+M ARL E KN AL T + G T+ + V+VKV S
Sbjct: 188 IREDVRMLHPKDILDIMHRARLGEKKN--------NVALNSTKRKG-TVKERSVIVKVVS 247
Query: 247 GETHNFISRNLAKDLKLPVDDYGISSVVLGSGKAIKVDEVFRGVLLRIQNLTFVEDCLPI 306
+N IS+NLA DLKL +D YG SVVLGSGK +K D + RGVLL+I N T+VED P+
Sbjct: 248 WTDYNLISKNLATDLKLKLDMYGDYSVVLGSGKKVKGDGICRGVLLQIGNDTYVEDFFPL 307
Query: 307 EMEGDFEVILGMPWLRG---MEVDWKARTMNM 321
+M D EVILG WL MEVDWK M +
Sbjct: 308 QMGEDDEVILGNLWLVALGKMEVDWKNLPMKL 328
BLAST of Sed0012281 vs. ExPASy TrEMBL
Match:
A0A5D3C860 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00050 PE=4 SV=1)
HSP 1 Score: 177.6 bits (449), Expect = 8.9e-41
Identity = 114/375 (30.40%), Postives = 186/375 (49.60%), Query Frame = 0
Query: 12 KKVTEEVQKTPAMEKKNEEEAKPKRRLPEAIANR----MLEFPLFHGTDAPTWILKIELH 71
+K + T + +++ + K EA A+R +E P+F G D +W+ + E +
Sbjct: 88 EKEANSSKSTVSGRSNSDDRNEGKTETEEAAADRNKFKKVEMPVFAGEDPDSWLFRAERY 147
Query: 72 FKFHAMDDFPTMIDVIALSMSGQALYWFRCLENQNQMPKSWNEFRHALFERFEGG--DTM 131
F+ H + D M+ V +S G AL W+R E + + SW + L RF + +
Sbjct: 148 FQIHKLSDSEKML-VSTISFDGPALNWYRSQEEREKF-TSWANLKERLLVRFRSSRDEKV 207
Query: 132 CERFIALQQHGTVREYCSQFELYGALLPDIPDSVLRAKFMNGLHALIRAEVRVFQPKHIR 191
ERF+ ++Q TV +Y + F+ A L D+PD V++ FMNGL IRAEVR+ +PK +
Sbjct: 208 LERFLRVKQESTVDDYRNLFDKLVAPLSDVPDPVVKDTFMNGLFPWIRAEVRICRPKGLA 267
Query: 192 DMMKTARLVEDKNL----------------------------------ASTSLPV----- 251
+MM+ A+LVE++ + +T+ P+
Sbjct: 268 EMMEFAQLVENREIERNEVNLNNFAGGKYSQQNTVNNRTPANTNSDSKTNTNFPMRTITL 327
Query: 252 ---GDALRHTMKLGATIDGKPVVVKVDSGETHNFISRNLAKDLKLPVDDYGISSVVLGSG 311
+A TMK+ I + V++ +D G THNFIS L + L+LPV + G V+LGSG
Sbjct: 328 RSSNNAEICTMKVKGKIQEREVIILIDYGATHNFISEKLVESLQLPVKETGHYGVILGSG 387
Query: 312 KAIKVDEVFRGVLLRIQNLTFVEDCLPIEMEGDFEVILGMPWLRGM---EVDWKARTMNM 336
++ + V +++ N E+ LP+E+ G +V+LGM WL + VDWK T+
Sbjct: 388 TVVQGKGICENVEIQLSNWKVKEEFLPLEL-GGVDVVLGMQWLHSLGITVVDWKNLTLTF 447
BLAST of Sed0012281 vs. ExPASy TrEMBL
Match:
A0A5A7T6B1 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G002030 PE=4 SV=1)
HSP 1 Score: 176.8 bits (447), Expect = 1.5e-40
Identity = 114/375 (30.40%), Postives = 185/375 (49.33%), Query Frame = 0
Query: 12 KKVTEEVQKTPAMEKKNEEEAKPKRRLPEAIANR----MLEFPLFHGTDAPTWILKIELH 71
+K + T + +++ + K EA A+R +E P+F G D +W+ + E +
Sbjct: 88 EKEANSSKSTVSGRSNSDDRNEGKTETEEAAADRNKFKKVEMPVFAGEDPDSWLFRAERY 147
Query: 72 FKFHAMDDFPTMIDVIALSMSGQALYWFRCLENQNQMPKSWNEFRHALFERFEGG--DTM 131
F+ H + D M+ V +S G AL W+R E + + SW + L RF + +
Sbjct: 148 FQIHKLSDSEKML-VSTISFDGPALNWYRSQEEREKF-TSWANLKERLLVRFRSSRDEKV 207
Query: 132 CERFIALQQHGTVREYCSQFELYGALLPDIPDSVLRAKFMNGLHALIRAEVRVFQPKHIR 191
ERF+ ++Q TV +Y + F+ A L D+PD V++ FMNGL IRAEVR+ +PK +
Sbjct: 208 LERFLRVKQESTVDDYRNLFDKLVAPLSDVPDPVVKDTFMNGLFPWIRAEVRICRPKGLA 267
Query: 192 DMMKTARLVEDKNL----------------------------------ASTSLPV----- 251
+MM+ A+LVE++ + +T+ P+
Sbjct: 268 EMMEFAQLVENREIERNEVNLNNFAGGKYSQQNTVNNRTPANTNSDSKTNTNFPMRTITL 327
Query: 252 ---GDALRHTMKLGATIDGKPVVVKVDSGETHNFISRNLAKDLKLPVDDYGISSVVLGSG 311
+A TMK+ I + V++ +D G THNFIS L + L+LPV + G V+LGSG
Sbjct: 328 RSSNNAEICTMKVKGKIQEREVIILIDYGATHNFISEKLVESLQLPVKETGHYGVILGSG 387
Query: 312 KAIKVDEVFRGVLLRIQNLTFVEDCLPIEMEGDFEVILGMPWLRGM---EVDWKARTMNM 336
++ + V +++ N E+ LP+E+ G +V+LGM WL + VDWK T+
Sbjct: 388 TVVQGKGICENVEIQLSNWKVKEEFLPLEL-GGVDVVLGMQWLHSLGITVVDWKNLTLTF 447
BLAST of Sed0012281 vs. ExPASy TrEMBL
Match:
A0A0A0LUB3 (Retrotrans_gag domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064860 PE=4 SV=1)
HSP 1 Score: 170.2 bits (430), Expect = 1.4e-38
Identity = 97/204 (47.55%), Postives = 123/204 (60.29%), Query Frame = 0
Query: 7 METKLKKV-TEEVQKTPAMEKKNEE---------EAKPKRRLPEAIANRM--LEFPLFHG 66
+E KLKKV EEV P + + A +R L A +RM LE P+F G
Sbjct: 8 LEAKLKKVEDEEVHNIPITDNNHTTLLHQMALLLNAHQQRLLQYAPTHRMPNLELPMFDG 67
Query: 67 TDAPTWILKIELHFKFHAMDDFPTMIDVIALSMSGQALYWFRCLENQNQMPKSWNEFRHA 126
TD WILK+E +F+ H +DD M++ I L MSGQAL WFRC +N P+SW EFR +
Sbjct: 68 TDTLMWILKMERYFEVHHIDDIAQMMETILLCMSGQALAWFRCFQNWGNPPESWGEFRGS 127
Query: 127 LFERFEGGDTMCERFIALQQHGTVREYCSQFELYGALLPDIPDSVLRAKFMNGLHALIRA 186
L++RF G + RFI LQQ G+V EYCS+FE GALLP++ V+ AKFMNGL IR
Sbjct: 128 LYKRFGDGHRVLSRFIGLQQEGSVGEYCSKFESLGALLPELSHCVVEAKFMNGLKTEIRG 187
Query: 187 EVRVFQPKHIRDMMKTARLVEDKN 199
EVR+ + I D+M ARL E KN
Sbjct: 188 EVRMLDTEGILDIMHRARLAEIKN 211
BLAST of Sed0012281 vs. TAIR 10
Match:
AT3G30770.1 (Eukaryotic aspartyl protease family protein )
HSP 1 Score: 57.0 bits (136), Expect = 3.4e-08
Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = 0
Query: 214 MKLGATIDGKPVVVKVDSGETHNFISRNLAKDLKLPVDDYGISSVVLGSGKAIKVDEVFR 273
M+ I VVV +DSG T+NFIS LA LKLP +SV+LG + I+
Sbjct: 284 MRFYGFISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQASVLLGQRQCIQTIGTCF 343
Query: 274 GVLLRIQNLTFVEDCLPIEM-EGDFEVILGMPWLRGMEVDW 314
G+ L +Q + E+ L +++ + D +VILG + +E W
Sbjct: 344 GINLLVQEVEINENFLLLDLTKTDVDVILGYGGSQNLERQW 384
BLAST of Sed0012281 vs. TAIR 10
Match:
AT3G42723.1 (aminoacyl-tRNA ligases;ATP binding;nucleotide binding )
HSP 1 Score: 56.6 bits (135), Expect = 4.4e-08
Identity = 37/123 (30.08%), Postives = 58/123 (47.15%), Query Frame = 0
Query: 80 IDVIALSMSGQALYWFRCLENQNQMPKSWNEFRHALFERFEGGDTM----CERFIALQQH 139
+ ++ ++ G W + L +N P SW EF+ + E TM + +QQ
Sbjct: 293 LQIVYSNLEGDIGQWIKHLWKKNS-PTSWKEFKCMMAR--ETKTTMKVNHQPHYSGIQQE 352
Query: 140 GTVREYCSQFELYGALLPDIPDSVLRAKFMNGLHALIRAEVRVFQPKHIRDMMKTARLVE 199
G+VREY +FE +P L A F+ GL ++ VR +P I MM TA+ +E
Sbjct: 353 GSVREYRERFEALCLGSVILPGQGLEALFLQGLQPSLQTAVRELKPNGIVQMMDTAQWLE 412
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0056890.1 | 1.2e-71 | 46.69 | aminoacyl-tRNA ligase [Cucumis melo var. makuwa] >TYJ99393.1 aminoacyl-tRNA liga... | [more] |
KAE8652678.1 | 5.0e-70 | 47.09 | hypothetical protein Csa_013756 [Cucumis sativus] | [more] |
XP_016900762.1 | 5.7e-66 | 46.39 | PREDICTED: uncharacterized protein LOC107991016 [Cucumis melo] | [more] |
TYK06549.1 | 1.8e-40 | 30.40 | transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] | [more] |
KAA0037097.1 | 3.1e-40 | 30.40 | Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BJD9 | 5.7e-72 | 46.69 | Aminoacyl-tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24... | [more] |
A0A1S4DXQ7 | 2.8e-66 | 46.39 | uncharacterized protein LOC107991016 OS=Cucumis melo OX=3656 GN=LOC107991016 PE=... | [more] |
A0A5D3C860 | 8.9e-41 | 30.40 | Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
A0A5A7T6B1 | 1.5e-40 | 30.40 | Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A0A0LUB3 | 1.4e-38 | 47.55 | Retrotrans_gag domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064... | [more] |
Match Name | E-value | Identity | Description | |
AT3G30770.1 | 3.4e-08 | 35.64 | Eukaryotic aspartyl protease family protein | [more] |
AT3G42723.1 | 4.4e-08 | 30.08 | aminoacyl-tRNA ligases;ATP binding;nucleotide binding | [more] |