Sed0011900 (gene) Chayote v1

Overview


Name	Sed0011900
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor AS1
Location	LG02: 44649900 .. 44653330 (+)
RNA-Seq Expression	Sed0011900
Synteny	Sed0011900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTTCCAATGGGGCCTTTCTTCCATCAGACTCGTCAACCCCACCAGCATCTCTTCCTCCATGGCTCTCGGCGGCGTCCCCCTCGGTCACCTTAACCCTCTCCTCCCCCATCCCCTGGCTGCAGCAAGACAGAATTCCAGCAACCACGCCTCTTGTGATGCCCAATTTGGCTCCTCCACCCTGCGGCGGAAGCCGCTTCGCCTCCGAGCTCGCCGAGTGCTGTCGGGAGCTCGAGGAGGGGCACCGGGCGTGGGCCGCTCACAAGAAGGAGGCAATGTGGAGGTTGAGGAGGCAGGAGCTGCAATTGGAGTCGGAAAAGGCGGCTCGAATTCGACGCAAGATGGAGGAGGTTCAAGGGAAGGTGAAGGCTCTTAGAGAGGAACAGAAGGCTGCATTGGAGAGGATGGAAGCTGAGTATAAGGAGCAGTTGGGTGGGTTGAGGAAAGACGCAGAGGCTAAAGAACACAAGTTGGCTCACCAATGGGCTGCAAAACACTTGAGCCTCACCAAGTTTCTTGACCACATGGCTTGCACAACTAGAATTGCTGACTCCACTGGAAGGTGACCAATCATAACTTCTTCATTCCTTTTCAATTGCTCTTTTTCTTTTCTTATATACTTTTGCTTCCATTTTGTATCTATTGATGACATCTCAATGTTTAAGAATATAAGCTTCAAACTAATGACTTTTTAATGGGTATAATGAGAGTGAGTTCTCTAATTGACATCGATCATTTCATTTAAGAATTTAAAAAGTAATTAAGAGAAAAATGATGATCTGATATAAATTGTTGCCTAGAATAAAAATTAATTAGGAGGATAATGAAAAATATGATTTTAAATAAATGTAATTAGAGGATAATGATTTTGAGTAGCCCAAATTAGGAGAACAATCTTTATTTTCATTCTCTCCATGGTTTCGGCTGACACAATCACACTTTTTTTTGTTTTTCTTTTTTATCGAAAAGAAATCATAATATCATTAACAAACCAAAGAACCAACAAACTTCCACTCCTCCACAATAAGGAGGCAATACAAGGGGGGAGAGAACCCCTCCAAAAAGGCGGACTTATCCCCTCAATCTCAAGTGGAATCGCGTCAAAAGAAAATAACCAAGAATCCTTACAATGAACTAACCGATCAGCAACATGATTGCAAGACTTATAGCAATGGAAAACTTGAATGTTCCCCGAGTAAGTAACCAACTCCCTCATATCAAGAAACACACTTTTAAAGAAACAAATTAAAACGTGTTTGTTAGAAATGGTTTGTCAGCATCGGGCTACCTATTTTTGAAATATTTAGCGAGAATTTCATCGTTGATGTATAATTTATTGAATTGTGGGAAGGTGACTTCATTTGATGTTTAAAAACTCCATTCAACTCAACTATTTCACAAGAAAAAAAAAAGAAAAAGAAAAAAGATAGTGGAGGATCTATTGAATTGTAAGTATTCAATTCCCACCATAGTTGATGCATGAATTTAAATGGATATTGGAGTAAGGCCCACAATAATGGGCTCCTAGTGTTCAATTTGCACGATTAGGATTTTATAAATTTTTAGATGCATGATTCTTTATATTTGACAACATAGCATCGATAGAAATCTAACTTAAAAGACATTTCTATTACTATGAGAGTCTAATAGTTTAGAAATGCAGCGAGAAGATAGGGAAGTCATTGATGAATAGAGAGAATTTGGAGAGAATCGTAGAGAATTGTTTATTAAAGAAGAAGTGGAGGCTATAAGTCACACTCAACACAATCTTAATATATTCTATATATAGGCTATTAATACTAACTCTAACAATAAGGTTCAATGGGCTCTAATATCTAACAGAGAGGAGAATTTCGTTGATTTGATACCAAGATTATAAGTGTGACGTTGATGTTGAACTGATTTACCACAAAACAATGAAACTATTGCGTCATTGATCTATTCGGTATAAATTATTTTTTTTAATTTTCTGATCACTACAACTTCAGCTCATTAGTTAAGTTATTTTGGGTTGTTATATATTTCTATTTTAAGATTGAAGTTTTCCTCGATAAATATTCCTCAAACATAAAAATGAAGCAAAATATTTCCATCATTATTGATTTAATATCAAACCCAACCTAATAGCCAAAACTTCAATCGTAGAAACCACAATCACTCACTTTATTGGCGATTTTAAGGTAAATAAAACCCCATAATTCATTTTTTACGATGGAACTAAGGCCACATTTATGAGATTCCACTCGAATAGCTATATCACAATTAAGTTTGTAATTTTGCAGAATGGGGGAAATCCACTTATGATGCTTGGGGTGAGGATGACAAATAAAAAAGTTGTGAGTTTAATCCAAATATGGTAGATTTATTAATAATAAAGTCATATTTTATATTTAGTTAAACAAAATAAAATTTAAGTACAGTACAAATGGATAAGATACTATACCAGCTATATTATGACCATAAATGTTGAAATCAATCTCATGTTATTGAATTAAAAAAAAAAGTTAAATGGGATAAATTATTATAGAGCGTTCATGTCTTCCAACAAATTTTTTTTTTGAAACAGATTTCTTCCAACAATTAAGTGCCATCCAAATTTGAATAGGTTACAATTTTATAGACAAAACTTTGAAGGAAAATAAAAACGCTATTAATAAAAGCTAACTTGAATGAAAGAAGAGTTCACACGATTTATTGCGCAGTCTTCCAAATAATAGTTGAGGCAACAATTGTTTTATATGTATATAATAAGCTCTCGAGTGTGACCTCTTATTATGTAACAATTTTTTTTCATTTTTTTTCATACCTAACTTCTTTAAAATAAACTATCAACAAATATTAGGGAATATGAGGGGAGTAACGATGATGCCCATTTTGGGCTCATCAATCTTAAATTGGATCTCAATTTCATCATTTTTATTGAATCGATACCCGTTTGAGTTTTATGGACTCTAATACCATATTAGAGAATGTGAACTTGCACCTCAAAACCATTTAACAATGGAGAAGTGTAACGGCCCATATTTCCATTCCGGTCTTCCAGGTACTCTTGGTTCAGTATTAGGGCAATCGGTTGGGCCGTTAGAGCATTTTAACCCTTGGGGGTATTTTGGTCTTTTGCTCCCCAATCAAGATTTGGGATTTGAACCTTTGCCTTAGTGATTTATTAAGTGAGTTTCATTATCGGAAAAGATCGCTTCAGCCGGGTCTCGAAGAGGAAGCCAAAAATGGGATTTTTAGGGATTTATTTAATTGGATTTTAAGGCATTTTAATGGGATAAGTTTGAAATATTAAATAAATAAAGAAAAATCCCCACATTTCCCCATGTGTTTAATTTTCATTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCACCAGACCCCTAGCCAGCCCCGAGCCCCCCTTGCTCGCCCAGTTCGCCTAG

mRNA sequence

ATGGCAACTTCCAATGGGGCCTTTCTTCCATCAGACTCGTCAACCCCACCAGCATCTCTTCCTCCATGGCTCTCGGCGGCGTCCCCCTCGGTCACCTTAACCCTCTCCTCCCCCATCCCCTGGCTGCAGCAAGACAGAATTCCAGCAACCACGCCTCTTGTGATGCCCAATTTGGCTCCTCCACCCTGCGGCGGAAGCCGCTTCGCCTCCGAGCTCGCCGAGTGCTGTCGGGAGCTCGAGGAGGGGCACCGGGCGTGGGCCGCTCACAAGAAGGAGGCAATGTGGAGGTTGAGGAGGCAGGAGCTGCAATTGGAGTCGGAAAAGGCGGCTCGAATTCGACGCAAGATGGAGGAGGTTCAAGGGAAGGTGAAGGCTCTTAGAGAGGAACAGAAGGCTGCATTGGAGAGGATGGAAGCTGAGTATAAGGAGCAGTTGGGTGGGTTGAGGAAAGACGCAGAGGCTAAAGAACACAAGTTGGCTCACCAATGGGCTGCAAAACACTTGAGCCTCACCAAGTTTCTTGACCACATGGCTTGCACAACTAGAATTGCTGACTCCACTGGAAGACCCCTAGCCAGCCCCGAGCCCCCCTTGCTCGCCCAGTTCGCCTAG

Coding sequence (CDS)

ATGGCAACTTCCAATGGGGCCTTTCTTCCATCAGACTCGTCAACCCCACCAGCATCTCTTCCTCCATGGCTCTCGGCGGCGTCCCCCTCGGTCACCTTAACCCTCTCCTCCCCCATCCCCTGGCTGCAGCAAGACAGAATTCCAGCAACCACGCCTCTTGTGATGCCCAATTTGGCTCCTCCACCCTGCGGCGGAAGCCGCTTCGCCTCCGAGCTCGCCGAGTGCTGTCGGGAGCTCGAGGAGGGGCACCGGGCGTGGGCCGCTCACAAGAAGGAGGCAATGTGGAGGTTGAGGAGGCAGGAGCTGCAATTGGAGTCGGAAAAGGCGGCTCGAATTCGACGCAAGATGGAGGAGGTTCAAGGGAAGGTGAAGGCTCTTAGAGAGGAACAGAAGGCTGCATTGGAGAGGATGGAAGCTGAGTATAAGGAGCAGTTGGGTGGGTTGAGGAAAGACGCAGAGGCTAAAGAACACAAGTTGGCTCACCAATGGGCTGCAAAACACTTGAGCCTCACCAAGTTTCTTGACCACATGGCTTGCACAACTAGAATTGCTGACTCCACTGGAAGACCCCTAGCCAGCCCCGAGCCCCCCTTGCTCGCCCAGTTCGCCTAG

Protein sequence

MATSNGAFLPSDSSTPPASLPPWLSAASPSVTLTLSSPIPWLQQDRIPATTPLVMPNLAPPPCGGSRFASELAECCRELEEGHRAWAAHKKEAMWRLRRQELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRKDAEAKEHKLAHQWAAKHLSLTKFLDHMACTTRIADSTGRPLASPEPPLLAQFA

Homology

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BLAST of Sed0011900 vs. NCBI nr
Match: XP_038903104.1 (transcription factor AS1-like [Benincasa hispida] >XP_038903105.1 transcription factor AS1-like [Benincasa hispida])

HSP 1 Score: 277.7 bits (709), Expect = 7.9e-71
Identity = 157/210 (74.76%), Postives = 169/210 (80.48%), Query Frame = 0


Query: 1   MATSNGAFLPSDSSTPPASLPPWLSAA---------SPSVTLTLS-------SPIPWLQQ 60
           MATSNG FL +DSSTPP SLPPWLS +         SPSVTLTLS       SPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  -DRIPATTPLVMPNLAP----PPCGGSRFASELAECCRELEEGHRAWAAHKKEAMWRLRR 120
            +RIP   PLV+ NLAP    P CGGS FASEL ECCREL EGHRAWAAHKKE  WRLRR
Sbjct: 61  PERIPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELNEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRKDAEAKEHKL 180
           QELQLESEKA+RIR+KMEEV+GKVKALREE+K ALER+EAEYKEQL GLRKDAEAKE KL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AHQWAAKHLSLTKFLDHMACTTRIADSTGR 190
           A QWAAKHLSLTKFL+HM C TRIA+S+GR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 210

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BLAST of Sed0011900 vs. NCBI nr
Match: XP_008442545.1 (PREDICTED: transcription factor AS1 [Cucumis melo] >KAA0044093.1 transcription factor AS1 [Cucumis melo var. makuwa] >TYK25044.1 transcription factor AS1 [Cucumis melo var. makuwa])

HSP 1 Score: 276.6 bits (706), Expect = 1.8e-70
Identity = 155/210 (73.81%), Postives = 169/210 (80.48%), Query Frame = 0


Query: 1   MATSNGAFLPSDSSTPPASLPPWLSAA---------SPSVTLTLSS-------PIPWLQQ 60
           MATSNG FL +DSSTPP SLPPWLS +         SPSVTLTLSS       PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  -DRIPATTPLVMPNLAP----PPCGGSRFASELAECCRELEEGHRAWAAHKKEAMWRLRR 120
            DR+P   PLV+ NLAP    P CGGS FASEL ECCREL+EGHRAWAAHKKE  WRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRKDAEAKEHKL 180
           QELQLESEKA+RIR+KMEEV+GKVKALREE+K ALER+EAEYKEQL G RKDAEAKE KL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AHQWAAKHLSLTKFLDHMACTTRIADSTGR 190
           A QWAAKH+SLTKFL+HM C TRIA+S+GR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

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BLAST of Sed0011900 vs. NCBI nr
Match: KAG6596407.1 (E3 ubiquitin-protein ligase PRT6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-70
Identity = 156/219 (71.23%), Postives = 174/219 (79.45%), Query Frame = 0


Query: 1   MATSNGAFLPSDSSTPPASLPPWLSAA---------SPSVTLTLS-------SPIPWLQQ 60
           MATSNG FL +DSSTPP SLPPWLS +         SPSVTLTLS       SPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  -DRIPATTPLVMPNLAP----PPCGGSRFASELAECCRELEEGHRAWAAHKKEAMWRLRR 120
            +RIP T PLV+ N+AP    P CGGS FASEL ECCREL+EGHRAWA+HKKE  WRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRKDAEAKEHKL 180
           QELQLESEKA+RIR+KMEEV+GKVKA+REE+K ALER+EAEYKEQL GLRKDAEAKE KL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AHQWAAKHLSLTKFLDHMACTTRIADSTGRPLASPEPPL 199
           A QWAAKHLSLTKFL+HM C T+I++S+GR     E PL
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGRVETWGEQPL 219

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BLAST of Sed0011900 vs. NCBI nr
Match: XP_022982614.1 (transcription factor AS1-like [Cucurbita maxima] >XP_022982615.1 transcription factor AS1-like [Cucurbita maxima])

HSP 1 Score: 275.8 bits (704), Expect = 3.0e-70
Identity = 156/210 (74.29%), Postives = 169/210 (80.48%), Query Frame = 0


Query: 1   MATSNGAFLPSDSSTPPASLPPWLSAA---------SPSVTLTLS-------SPIPWLQQ 60
           MATSNG FL +DSSTPP SLPPWLS +         SPSVTLTLS       SPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSLLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  -DRIPATTPLVMPNLAP----PPCGGSRFASELAECCRELEEGHRAWAAHKKEAMWRLRR 120
            +RIP   PLV+ NLAP      CGGS FASEL ECCREL+EGHRAWAAHKKE  WRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRKDAEAKEHKL 180
           QELQLESEKA+RIR+KMEEV+GKVKALREE+K+ LER+EAEYKEQL GLRKDAEAKE KL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKSGLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AHQWAAKHLSLTKFLDHMACTTRIADSTGR 190
           A QWAAKHLSLTKFL+HM C TRIADS+GR
Sbjct: 181 ADQWAAKHLSLTKFLEHMGCRTRIADSSGR 210

[Close]

BLAST of Sed0011900 vs. NCBI nr
Match: XP_022948252.1 (transcription factor AS1-like [Cucurbita moschata] >XP_022948253.1 transcription factor AS1-like [Cucurbita moschata] >XP_022971572.1 transcription factor AS1-like [Cucurbita maxima] >XP_022971573.1 transcription factor AS1-like [Cucurbita maxima] >XP_023540705.1 transcription factor AS1-like [Cucurbita pepo subsp. pepo] >XP_023540706.1 transcription factor AS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.0 bits (702), Expect = 5.1e-70
Identity = 153/210 (72.86%), Postives = 171/210 (81.43%), Query Frame = 0


Query: 1   MATSNGAFLPSDSSTPPASLPPWLSAA---------SPSVTLTLS-------SPIPWLQQ 60
           MATSNG FL +DSSTPP SLPPWLS +         SPSVTLTLS       SPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  -DRIPATTPLVMPNLAP----PPCGGSRFASELAECCRELEEGHRAWAAHKKEAMWRLRR 120
            +RIP T PLV+ N+AP    P CGGS FASEL ECCREL+EGHRAWA+HKKE  WRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRKDAEAKEHKL 180
           QELQLESEKA+RIR+KMEEV+GKVKA+REE+K ALER+EAEYKEQL GLRKDAEAKE KL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AHQWAAKHLSLTKFLDHMACTTRIADSTGR 190
           A QWAAKHLSLTKFL+HM C T+I++S+GR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGR 210

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BLAST of Sed0011900 vs. ExPASy Swiss-Prot
Match: O80931 (Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-44
Identity = 114/207 (55.07%), Postives = 135/207 (65.22%), Query Frame = 0


Query: 1   MATSNGAFLPSDSSTPPAS--LPPWLS---------AASPSVTLTLS----------SPI 60
           MA SNG FL S+    P +  +PPWL+         A  PSVTLTLS           PI
Sbjct: 156 MANSNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPI 215

Query: 61  PWLQQDRIPATT----PLVMPNLAPPPCGGSR--FASELAECCRELEEGHRAWAAHKKEA 120
           PWLQQ +          LV+ ++ P   G S   F SEL ECCRELEEGHRAWA HKKEA
Sbjct: 216 PWLQQQQPERAENGPGGLVLGSMMPSCSGSSESVFLSELVECCRELEEGHRAWADHKKEA 275

Query: 121 MWRLRRQELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRKDAE 180
            WRLRR ELQLESEK  R R KMEE++ K+KALREEQK A+E++E EY+EQL GLR+DAE
Sbjct: 276 AWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRRDAE 335

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BLAST of Sed0011900 vs. ExPASy Swiss-Prot
Match: Q94IB1 (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.5e-37
Identity = 93/173 (53.76%), Postives = 117/173 (67.63%), Query Frame = 0


Query: 20  LPPWL-----SAASPSVTLTLSSPIPWLQQDRIPATTPLVMPNLAPPPC-----GGSRFA 79
           LPPW+     S++SPSVTL+L+S           A  P      APPP      GG    
Sbjct: 165 LPPWMSSSPSSSSSPSVTLSLAS----------AAVAP---APAAPPPTWGGGGGGEVVV 224

Query: 80  SELAECCRELEEGHRAWAAHKKEAMWRLRRQELQLESEKAARIRRKMEEVQGKVKALREE 139
           +EL ECCRE+EEG RAWAAH+KEA WR++R E+QLE+E+A R R   EE + K++ALREE
Sbjct: 225 AELMECCREMEEGQRAWAAHRKEAAWRMKRVEMQLETERACRRREATEEFEAKMRALREE 284

Query: 140 QKAALERMEAEYKEQLGGLRKDAEAKEHKLAHQWAAKHLSLTKFLDHMACTTR 183
           Q AA+ER+EAEY+E++ GLR+DAEAKE K+A QWAAKH  L KFLD +A   R
Sbjct: 285 QAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAKFLDQVAACRR 324

[Close]

BLAST of Sed0011900 vs. ExPASy Swiss-Prot
Match: Q9S7B2 (Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.0e-28
Identity = 86/212 (40.57%), Postives = 114/212 (53.77%), Query Frame = 0


Query: 7   AFLPSDSSTPPASLPPWLSA-------------------ASPSVTLTLSS---------P 66
           A  PS        LPPWLS+                    SPSVTL+L+S         P
Sbjct: 149 AAAPSPLLMAAPVLPPWLSSNAGPAAAAAAAVAHPPPRPPSPSVTLSLASAAVAPGPPAP 208

Query: 67  IPWLQQDRIPATTPLVMPN------LAPPPCG--GSRFASELAECCRELEEGHRAWAAHK 126
            PW+         P   P+       APP       +  +ELAECCRELEEG RAWAAH+
Sbjct: 209 APWMPDRAAADAAPYGFPSPSQHGGAAPPGMAVVDGQALAELAECCRELEEGRRAWAAHR 268

Query: 127 KEAMWRLRRQELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRK 183
           +EA WRL+R E QLE E+  R R   EE + K++ +R EQ AA ER+E +++E++  LR+
Sbjct: 269 REAAWRLKRVEQQLEMEREMRRREVWEEFEAKMRTMRLEQAAAAERVERDHREKVAELRR 328

[Close]

BLAST of Sed0011900 vs. ExPASy TrEMBL
Match: A0A5D3DN74 (Transcription factor AS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001650 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.5e-71
Identity = 155/210 (73.81%), Postives = 169/210 (80.48%), Query Frame = 0


Query: 1   MATSNGAFLPSDSSTPPASLPPWLSAA---------SPSVTLTLSS-------PIPWLQQ 60
           MATSNG FL +DSSTPP SLPPWLS +         SPSVTLTLSS       PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  -DRIPATTPLVMPNLAP----PPCGGSRFASELAECCRELEEGHRAWAAHKKEAMWRLRR 120
            DR+P   PLV+ NLAP    P CGGS FASEL ECCREL+EGHRAWAAHKKE  WRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRKDAEAKEHKL 180
           QELQLESEKA+RIR+KMEEV+GKVKALREE+K ALER+EAEYKEQL G RKDAEAKE KL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AHQWAAKHLSLTKFLDHMACTTRIADSTGR 190
           A QWAAKH+SLTKFL+HM C TRIA+S+GR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of Sed0011900 vs. ExPASy TrEMBL
Match: A0A1S3B5G1 (transcription factor AS1 OS=Cucumis melo OX=3656 GN=LOC103486384 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.5e-71
Identity = 155/210 (73.81%), Postives = 169/210 (80.48%), Query Frame = 0


Query: 1   MATSNGAFLPSDSSTPPASLPPWLSAA---------SPSVTLTLSS-------PIPWLQQ 60
           MATSNG FL +DSSTPP SLPPWLS +         SPSVTLTLSS       PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  -DRIPATTPLVMPNLAP----PPCGGSRFASELAECCRELEEGHRAWAAHKKEAMWRLRR 120
            DR+P   PLV+ NLAP    P CGGS FASEL ECCREL+EGHRAWAAHKKE  WRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRKDAEAKEHKL 180
           QELQLESEKA+RIR+KMEEV+GKVKALREE+K ALER+EAEYKEQL G RKDAEAKE KL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AHQWAAKHLSLTKFLDHMACTTRIADSTGR 190
           A QWAAKH+SLTKFL+HM C TRIA+S+GR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of Sed0011900 vs. ExPASy TrEMBL
Match: A0A6J1J530 (transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111481437 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.5e-70
Identity = 156/210 (74.29%), Postives = 169/210 (80.48%), Query Frame = 0


Query: 1   MATSNGAFLPSDSSTPPASLPPWLSAA---------SPSVTLTLS-------SPIPWLQQ 60
           MATSNG FL +DSSTPP SLPPWLS +         SPSVTLTLS       SPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSLLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  -DRIPATTPLVMPNLAP----PPCGGSRFASELAECCRELEEGHRAWAAHKKEAMWRLRR 120
            +RIP   PLV+ NLAP      CGGS FASEL ECCREL+EGHRAWAAHKKE  WRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRKDAEAKEHKL 180
           QELQLESEKA+RIR+KMEEV+GKVKALREE+K+ LER+EAEYKEQL GLRKDAEAKE KL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKSGLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AHQWAAKHLSLTKFLDHMACTTRIADSTGR 190
           A QWAAKHLSLTKFL+HM C TRIADS+GR
Sbjct: 181 ADQWAAKHLSLTKFLEHMGCRTRIADSSGR 210

[Close]

BLAST of Sed0011900 vs. ExPASy TrEMBL
Match: A0A6J1I2B9 (transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111470250 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.5e-70
Identity = 153/210 (72.86%), Postives = 171/210 (81.43%), Query Frame = 0


Query: 1   MATSNGAFLPSDSSTPPASLPPWLSAA---------SPSVTLTLS-------SPIPWLQQ 60
           MATSNG FL +DSSTPP SLPPWLS +         SPSVTLTLS       SPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  -DRIPATTPLVMPNLAP----PPCGGSRFASELAECCRELEEGHRAWAAHKKEAMWRLRR 120
            +RIP T PLV+ N+AP    P CGGS FASEL ECCREL+EGHRAWA+HKKE  WRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRKDAEAKEHKL 180
           QELQLESEKA+RIR+KMEEV+GKVKA+REE+K ALER+EAEYKEQL GLRKDAEAKE KL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AHQWAAKHLSLTKFLDHMACTTRIADSTGR 190
           A QWAAKHLSLTKFL+HM C T+I++S+GR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGR 210

[Close]

BLAST of Sed0011900 vs. ExPASy TrEMBL
Match: A0A6J1G8P0 (transcription factor AS1-like OS=Cucurbita moschata OX=3662 GN=LOC111451947 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.5e-70
Identity = 153/210 (72.86%), Postives = 171/210 (81.43%), Query Frame = 0


Query: 1   MATSNGAFLPSDSSTPPASLPPWLSAA---------SPSVTLTLS-------SPIPWLQQ 60
           MATSNG FL +DSSTPP SLPPWLS +         SPSVTLTLS       SPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  -DRIPATTPLVMPNLAP----PPCGGSRFASELAECCRELEEGHRAWAAHKKEAMWRLRR 120
            +RIP T PLV+ N+AP    P CGGS FASEL ECCREL+EGHRAWA+HKKE  WRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRKDAEAKEHKL 180
           QELQLESEKA+RIR+KMEEV+GKVKA+REE+K ALER+EAEYKEQL GLRKDAEAKE KL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AHQWAAKHLSLTKFLDHMACTTRIADSTGR 190
           A QWAAKHLSLTKFL+HM C T+I++S+GR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGR 210

[Close]

BLAST of Sed0011900 vs. TAIR 10
Match: AT2G37630.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 181.4 bits (459), Expect = 7.2e-46
Identity = 114/207 (55.07%), Postives = 135/207 (65.22%), Query Frame = 0


Query: 1   MATSNGAFLPSDSSTPPAS--LPPWLS---------AASPSVTLTLS----------SPI 60
           MA SNG FL S+    P +  +PPWL+         A  PSVTLTLS           PI
Sbjct: 156 MANSNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPI 215

Query: 61  PWLQQDRIPATT----PLVMPNLAPPPCGGSR--FASELAECCRELEEGHRAWAAHKKEA 120
           PWLQQ +          LV+ ++ P   G S   F SEL ECCRELEEGHRAWA HKKEA
Sbjct: 216 PWLQQQQPERAENGPGGLVLGSMMPSCSGSSESVFLSELVECCRELEEGHRAWADHKKEA 275

Query: 121 MWRLRRQELQLESEKAARIRRKMEEVQGKVKALREEQKAALERMEAEYKEQLGGLRKDAE 180
            WRLRR ELQLESEK  R R KMEE++ K+KALREEQK A+E++E EY+EQL GLR+DAE
Sbjct: 276 AWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRRDAE 335

The following BLAST results are available for this feature:

BLAST of Sed0011900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903104.1	7.9e-71	74.76	transcription factor AS1-like [Benincasa hispida] >XP_038903105.1 transcription ...	[more]
XP_008442545.1	1.8e-70	73.81	PREDICTED: transcription factor AS1 [Cucumis melo] >KAA0044093.1 transcription f...	[more]
KAG6596407.1	2.3e-70	71.23	E3 ubiquitin-protein ligase PRT6, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022982614.1	3.0e-70	74.29	transcription factor AS1-like [Cucurbita maxima] >XP_022982615.1 transcription f...	[more]
XP_022948252.1	5.1e-70	72.86	transcription factor AS1-like [Cucurbita moschata] >XP_022948253.1 transcription...	[more]

BLAST of Sed0011900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80931	1.0e-44	55.07	Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1	[more]
Q94IB1	3.5e-37	53.76	Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 P...	[more]
Q9S7B2	5.0e-28	40.57	Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1	[more]

BLAST of Sed0011900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DN74	8.5e-71	73.81	Transcription factor AS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B5G1	8.5e-71	73.81	transcription factor AS1 OS=Cucumis melo OX=3656 GN=LOC103486384 PE=4 SV=1	[more]
A0A6J1J530	1.5e-70	74.29	transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111481437 PE=4 S...	[more]
A0A6J1I2B9	2.5e-70	72.86	transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111470250 PE=4 S...	[more]
A0A6J1G8P0	2.5e-70	72.86	transcription factor AS1-like OS=Cucurbita moschata OX=3662 GN=LOC111451947 PE=4...	[more]

BLAST of Sed0011900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37630.1	7.2e-46	55.07	myb-like HTH transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 99..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR47214	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 19..189
IPR031055	Protein rough sheath 2 /ASYMMETRIC LEAVES1	PANTHER	PTHR47214:SF3	TRANSCRIPTION FACTOR AS1	coord: 19..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011900.1	Sed0011900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010338	leaf formation
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus