Sed0011604 (gene) Chayote v1

Overview


Name	Sed0011604
Type	gene
Organism	Sechium edule (Chayote v1)
Description	LIM domain-containing protein PLIM2b-like
Location	LG02: 51732270 .. 51735460 (+)
RNA-Seq Expression	Sed0011604
Synteny	Sed0011604

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCAAACAAAACAGCGTGCTCTGAAAACCCGGCAAAAACAGTCGTCCTCTCGAACGAACACAACGTGGCGGAGGCGAATGGGATTCATCATCTCTTCCATTTTTCTCTCTGAAAAAGCTCCGATTCCATGGAAACGGTCAACCGATCCGGCCTTGTTTCTCTCAAAGACAACCCATACGGTTCGGAATAGGAGCCGATCCAGCCAGTGATTTCAATTTCGATTCTCAGCTATAAATCTGTTCTCGCAGTTTATCAATTGAAGCCTTTCCATTCTCCCCCATCGCACTCTGATCCGGCTTCGTTCGCCAGTTCTTGCAAAACGCTGTCAATCCATCGCAATGGCTTTCACTGGAACTTTGGACAAATGCAAGGCTTGTGATAAGACTGTCTATGTGGTCGATTTGTTGTCTCTCGAGGGAAATCCTTACCATAAGAATTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCGGTTCGTTTCTATTCAACATTGTTATTATGCGTTGATTTTGCCCATTCAATTATGTTAAATCATCGATCGACTCAAAAGTTTAAGCTCACGAGTTGGGGTATTTTTTAGGAAAATTGTATTAGATGGACATAGTAATTTAGCAATGGGAATATTTGAAAGTATTTGCATCCTTACTCATTAATACGTTTCAATAAATGATCGTATTTATAATTATTTTTATAGATTTGACTAATCTGATAAGTTTTTCTATATTTTAATTTTATCAATTAATACACTCCTTGGAAATGCCTTACAAGTGGAACTTAATTTTAATTGGAGAAGAAACGATTCGGTAGAGATTCAAATTCATGACCTCTTACTATGATATTATGTTCAATTATGTTAAATTCCTCTCACTTGAAGGTTTAGAAATTAAGTAGAACTTAATTTTAATTGGGGAGGAAAGGTGAGAGATTCAAACTCAAGAACACTCTTTAATAGCATGTTGAATTATGTTAAATCACTAATTAAGCCAAAAATTTAAATCGATGGGTCGAGGAATATAATTGTTTGTTTGTGATGATAGATGAGCAGCTACTCGTGGATGGACGGTGTCCTGTATTGCAAACCTCATTTCGAGCAGCTCTTTAAAGAATCTGGAAATTTCAGCAAGAACTTTCAAAGTAGTAGTATTTTCACTTCTTTTGTTTCAATTTCTTTCTTTCTTTTTATTTCTTTTCATGTTTGTTTTCCTGACATTTCTCTCGTTTTAATGGTACAATGACAGAGTCTTCTGACAAGCAAAATGAACTGGTATACTCTCCCTGTTTTCATTTTCTTATGCCTGATAAATGCTTATTCCTCCCATGGGAGAAATTGTTTGTGTTGAAATTTGATATTTATAGGGCACATTCAAATTTTCAATAAGAACATAGCTCAACTGTCATATCTGTGTGACTGTGTGCACATGACCTCGGTTATGAGGACGAATTCTCCACCCTTCAATTGTCATTGAACCAAAAAAGATCACTCAAATTTTCAAATTCATAATGGCTATTAGGATTTAGGAGACAACATATTGTAGTGACCTTATGCAATAGTTTTTTCTTGGATGTCATTCTTTCAAGTCATGGTTTTGAATATGCCAATCCTAATAGGCTTAGCTTTGCCACGTCGACTTCAACCTTTAAGCCCATCCACCACCCACCCTCTTGCTTCTTTGTATTTCAAACTTTTAGGTTTGTAATTTACTGATTTATCTATCTGTTTTGCTCTTTTATTGTCCCTTATCATTGTTTCGAAAGGTTTTATGGTAACACTTTCACTTAATCAATAAAAATGTTTTCGTGTCCTTTTCAAGAAAATGGTTTTGAGATGAAAGCTCATAATGTGGTATCAAAGCCCATTAAACCAAACATGTATTCTAGTTAACAAAATGAAATTGAGATCCAATCCAAAAATGGTGAACCAAAAGAGGCACCATCTTGAAATAACATATTGAAGATGCGAGGAGCCTCGCTCCTCCATTTTTTTTAGACAAAATACATTTTCATTATAATTATGAAATGACAATAAGCAAGCCCACATAAACTACAATAAAGACCTCCATAAAATAGTTTTGTGATGAAATCTCATACTATCTTATATTTTAGCCGACGTGAATTGAATCAAGAAATTTCTACCTTGCGTTTTTCATGTAAATGCTGTAAATTTTACAAAGTAATACAACTTTCAAAATCTTTGACAGACAAGGACCCCTAGCAAGCTGTCCTCCATGTTTTCTGGAACTCAAGATAAATGTACTGCTTGCAGTAAAACAGTTTATCCATTAGAAAAGGTCTGTAGTTCTTCCCCTTTGCTTTTTATGATACATATGTTACTGGATTGTTGTGTGATCACAACCTACAAGCTCTCAAAATTGCGAAAGAAAAACTTTGTCCCCAACGGGTGGTGCGGTAGTCGAAAACTTGAGTTTTGAAGGTATGCTTCCCTCAAGGTTCCAAGTTCGAGATTTACCTGTAACATTAATTGTAGAAACTTCTCATGTCTGCATTCTTTCGATGTCTTCTAGTGCCTGACTTAGGGACGGGTGTAATTACACCGGGTATAGTGGAGCGAAGCTCCTATATCCCGGCTTCCAAATAAAAATAAATAAAAAAAAGGGTGTCAATATTTTTGGTTCCCGAACAGGTGAGTCTGGAGGGGGAATGCTATCACAAGAACTGCTTTAGATGTGCTCATGGTGGGTGCAATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCCTGTACTGCAAGCACCATTTTGCTCAGCTCTTTATGGTCAAAGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAAGCCACCACGCCCCCGGCCGAACATGCCGATGCCGATGCCGAAGAAGATGGCAAGCCTGAGCCGGAATCCGAGGAACAGCCAGTAGAGTAATCTTAAAATGCTTCTTCTGCTCTTCCAGCATTTGAGGAGAATTCTTTTTCGCTTTAATCTTCTTATATAACAAAACAAAAACTTTTTTTTTTTTTTTTTTTCTGTTTGGATTGAGAACCCATTTCCTTTTGTTCTCATTCACATTGACTTCCAATTTATAATGTAATGTAAGCCACATAAACAGAGCTTTCAAAAAATTTGTACCATTGTTTCTTCTGTTAGTAAGATGAGAAGCTAGAATAAAACAGCTCTGCCACAGTTTCAAATTACCAAAG

mRNA sequence

GTCCAAACAAAACAGCGTGCTCTGAAAACCCGGCAAAAACAGTCGTCCTCTCGAACGAACACAACGTGGCGGAGGCGAATGGGATTCATCATCTCTTCCATTTTTCTCTCTGAAAAAGCTCCGATTCCATGGAAACGGTCAACCGATCCGGCCTTGTTTCTCTCAAAGACAACCCATACGGTTCGGAATAGGAGCCGATCCAGCCAGTGATTTCAATTTCGATTCTCAGCTATAAATCTGTTCTCGCAGTTTATCAATTGAAGCCTTTCCATTCTCCCCCATCGCACTCTGATCCGGCTTCGTTCGCCAGTTCTTGCAAAACGCTGTCAATCCATCGCAATGGCTTTCACTGGAACTTTGGACAAATGCAAGGCTTGTGATAAGACTGTCTATGTGGTCGATTTGTTGTCTCTCGAGGGAAATCCTTACCATAAGAATTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGACGGTGTCCTGTATTGCAAACCTCATTTCGAGCAGCTCTTTAAAGAATCTGGAAATTTCAGCAAGAACTTTCAAAAGTCTTCTGACAAGCAAAATGAACTGACAAGGACCCCTAGCAAGCTGTCCTCCATGTTTTCTGGAACTCAAGATAAATGTACTGCTTGCAGTAAAACAGTTTATCCATTAGAAAAGGTGAGTCTGGAGGGGGAATGCTATCACAAGAACTGCTTTAGATGTGCTCATGGTGGGTGCAATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCCTGTACTGCAAGCACCATTTTGCTCAGCTCTTTATGGTCAAAGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAAGCCACCACGCCCCCGGCCGAACATGCCGATGCCGATGCCGAAGAAGATGGCAAGCCTGAGCCGGAATCCGAGGAACAGCCAGTAGAGTAATCTTAAAATGCTTCTTCTGCTCTTCCAGCATTTGAGGAGAATTCTTTTTCGCTTTAATCTTCTTATATAACAAAACAAAAACTTTTTTTTTTTTTTTTTTTCTGTTTGGATTGAGAACCCATTTCCTTTTGTTCTCATTCACATTGACTTCCAATTTATAATGTAATGTAAGCCACATAAACAGAGCTTTCAAAAAATTTGTACCATTGTTTCTTCTGTTAGTAAGATGAGAAGCTAGAATAAAACAGCTCTGCCACAGTTTCAAATTACCAAAG

Coding sequence (CDS)

ATGGCTTTCACTGGAACTTTGGACAAATGCAAGGCTTGTGATAAGACTGTCTATGTGGTCGATTTGTTGTCTCTCGAGGGAAATCCTTACCATAAGAATTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGACGGTGTCCTGTATTGCAAACCTCATTTCGAGCAGCTCTTTAAAGAATCTGGAAATTTCAGCAAGAACTTTCAAAAGTCTTCTGACAAGCAAAATGAACTGACAAGGACCCCTAGCAAGCTGTCCTCCATGTTTTCTGGAACTCAAGATAAATGTACTGCTTGCAGTAAAACAGTTTATCCATTAGAAAAGGTGAGTCTGGAGGGGGAATGCTATCACAAGAACTGCTTTAGATGTGCTCATGGTGGGTGCAATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCCTGTACTGCAAGCACCATTTTGCTCAGCTCTTTATGGTCAAAGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAAGCCACCACGCCCCCGGCCGAACATGCCGATGCCGATGCCGAAGAAGATGGCAAGCCTGAGCCGGAATCCGAGGAACAGCCAGTAGAGTAA

Protein sequence

MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFQKSSDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVSLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKATTPPAEHADADAEEDGKPEPESEEQPVE

Homology

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BLAST of Sed0011604 vs. NCBI nr
Match: XP_004133874.1 (LIM domain-containing protein PLIM2b [Cucumis sativus] >KGN56534.1 hypothetical protein Csa_011551 [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101
Identity = 184/207 (88.89%), Postives = 190/207 (91.79%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQ-KSSDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQ KSSDK N+LTRTPSKLSSMFSGTQDKC+ C+KTVYPLEKVSL
Sbjct: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120

Query: 121 EGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKAT 180
           EGECYHK CFRCAHGGC+LTH SYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK T
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPAEHADADAEEDGKPEPESEEQPVE 207
           TPPA+H D DAE    P P S EQ VE
Sbjct: 181 TPPADHTDEDAE----PSPRSGEQAVE 203

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BLAST of Sed0011604 vs. NCBI nr
Match: XP_038891791.1 (LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida])

HSP 1 Score: 377.5 bits (968), Expect = 7.5e-101
Identity = 182/207 (87.92%), Postives = 190/207 (91.79%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CK 
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQ-KSSDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQ K S+KQ+ELTRTPSKLSSMFSGTQDKC  C+KTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 120

Query: 121 EGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKAT 180
           EGECYHKNCFRCAHGGC+LTH SYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK T
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPAEHADADAEEDGKPEPESEEQPVE 207
           TPPAEH     EED  P+P+SEE  VE
Sbjct: 181 TPPAEH----GEEDADPQPQSEEHAVE 203

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BLAST of Sed0011604 vs. NCBI nr
Match: XP_038891725.1 (LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida])

HSP 1 Score: 377.1 bits (967), Expect = 9.7e-101
Identity = 182/208 (87.50%), Postives = 190/208 (91.35%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CK 
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQ--KSSDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVS 120
           HFEQLFKESGNFSKNFQ  K S+KQ+ELTRTPSKLSSMFSGTQDKC  C+KTVYPLEKV+
Sbjct: 61  HFEQLFKESGNFSKNFQSTKPSEKQSELTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKA 180
           LEGECYHKNCFRCAHGGC+LTH SYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK 
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT 180

Query: 181 TTPPAEHADADAEEDGKPEPESEEQPVE 207
           TTPPAEH     EED  P+P+SEE  VE
Sbjct: 181 TTPPAEH----GEEDADPQPQSEEHAVE 204

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BLAST of Sed0011604 vs. NCBI nr
Match: XP_008438068.1 (PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo])

HSP 1 Score: 375.9 bits (964), Expect = 2.2e-100
Identity = 181/207 (87.44%), Postives = 189/207 (91.30%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQ-KSSDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQ K S++QN+LTRTPSKLSSMF GTQDKC+ C+KTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSERQNDLTRTPSKLSSMFCGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKAT 180
           EGECYHK CFRCAHGGC+LTH SYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK T
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPAEHADADAEEDGKPEPESEEQPVE 207
           TPPAEH D DAE    P P S EQ VE
Sbjct: 181 TPPAEHTDEDAE----PSPRSGEQAVE 203

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BLAST of Sed0011604 vs. NCBI nr
Match: XP_022924376.1 (LIM domain-containing protein PLIM2c-like [Cucurbita moschata])

HSP 1 Score: 369.4 bits (947), Expect = 2.0e-98
Identity = 179/205 (87.32%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKCKACDKTVYVV+LLSLEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQ--KSSDKQNEL-TRTPSKLSSMFSGTQDKCTACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ  K S+KQN++ +R PSKLSSMFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 SLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK 180
           +LEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFM+KGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPAEHADADAEEDGKPEPESEE 203
           ATTPP E A+ D E  G  E +SEE
Sbjct: 181 ATTPPPESAEED-EAKGNAEAQSEE 204

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BLAST of Sed0011604 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 4.7e-82
Identity = 140/195 (71.79%), Postives = 160/195 (82.05%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKC  CDKTVYVVD+LS+EG PYHK+CF+C+HCKGTL MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQKSSDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVSLE 120
           HFEQLFKESGNFSKNFQ    ++ ELTRTPSK+SS+F GTQDKC AC KTVYPLEK+ +E
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQME 120

Query: 121 GECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKA-- 180
           GEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA +++   
Sbjct: 121 GECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTAS 180

Query: 181 --TTPPAEHADADAE 192
             T PP    D   E
Sbjct: 181 GNTLPPEPTEDVAVE 195

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BLAST of Sed0011604 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 2.2e-79
Identity = 147/220 (66.82%), Postives = 170/220 (77.27%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKCKACDKTVYV+DLL+LEGN YHK+CF+C+HCKGTL +S+YS MDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQ--KSSDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVS 120
           HFEQLFKESGN+SKNFQ  K+    + LTRTPSKLSS FSGTQDKC  C KTVYPLEKV+
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK- 180
           +EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 ------ATTPPAEHADADA-------EEDGKPEPESEEQP 205
                 A+ P  +H   D        E+D  PE   EE+P
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKEDDAAPEAAGEEEP 220

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BLAST of Sed0011604 vs. ExPASy Swiss-Prot
Match: Q500W4 (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.9e-79
Identity = 143/207 (69.08%), Postives = 165/207 (79.71%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKPH 61
           AFTGT DKCKACDKTVYV+DL++LEG PYHK+CF+CSHC GTL + +YS MDGVLYCK H
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQKS--SDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVSL 121
           FEQLFKESGNFSKNFQ +  ++K N+ T+ P++LSS FSGTQDKC AC KTVYPLEK+++
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKAT 181
           EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 TPPAEHADADAEEDGKPEPESEEQPVE 207
           T         AEED     E E  P E
Sbjct: 183 T---------AEEDKTEPKEDEANPTE 200

[Close]

BLAST of Sed0011604 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.9e-71
Identity = 120/182 (65.93%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGT  KCKAC+KTVY V+LLS +G  YHK+CFKC+HCK  L +SSYS M+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQ---KSSDKQN-ELTRTPSKLSSMFSGTQDKCTACSKTVYPLEK 120
           HFEQLFKESG+F+KNFQ   KS+DK   ELTRTPS+++  FSGTQ+KC  CSKTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VSLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANK 179
           V++E + YHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

[Close]

BLAST of Sed0011604 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.1e-70
Identity = 123/195 (63.08%), Postives = 157/195 (80.51%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGT  KC+AC+KTVY V+LLS +G  YHK CFKCSHCK  L +S+YS M+GV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQKS----SDKQN-ELTRTPSKLSSMFSGTQDKCTACSKTVYPLE 120
           HFEQLFKESG+FSKNFQ      +DK   EL RTPS+L+ MFSGTQDKC  C+KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVSLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN 180
           KV++E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKATTPPAEHADADA 191
           K+AT      A A A
Sbjct: 181 KRATAAATAAAAAVA 195

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BLAST of Sed0011604 vs. ExPASy TrEMBL
Match: A0A0A0L6A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.6e-102
Identity = 184/207 (88.89%), Postives = 190/207 (91.79%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQ-KSSDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQ KSSDK N+LTRTPSKLSSMFSGTQDKC+ C+KTVYPLEKVSL
Sbjct: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120

Query: 121 EGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKAT 180
           EGECYHK CFRCAHGGC+LTH SYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK T
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPAEHADADAEEDGKPEPESEEQPVE 207
           TPPA+H D DAE    P P S EQ VE
Sbjct: 181 TPPADHTDEDAE----PSPRSGEQAVE 203

[Close]

BLAST of Sed0011604 vs. ExPASy TrEMBL
Match: A0A1S3AVG8 (LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC103483289 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.0e-100
Identity = 181/207 (87.44%), Postives = 189/207 (91.30%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQ-KSSDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQ K S++QN+LTRTPSKLSSMF GTQDKC+ C+KTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSERQNDLTRTPSKLSSMFCGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKAT 180
           EGECYHK CFRCAHGGC+LTH SYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK T
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPAEHADADAEEDGKPEPESEEQPVE 207
           TPPAEH D DAE    P P S EQ VE
Sbjct: 181 TPPAEHTDEDAE----PSPRSGEQAVE 203

[Close]

BLAST of Sed0011604 vs. ExPASy TrEMBL
Match: A0A6J1E9B9 (LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC111431888 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 9.8e-99
Identity = 179/205 (87.32%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKCKACDKTVYVV+LLSLEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQ--KSSDKQNEL-TRTPSKLSSMFSGTQDKCTACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ  K S+KQN++ +R PSKLSSMFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 SLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK 180
           +LEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFM+KGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPAEHADADAEEDGKPEPESEE 203
           ATTPP E A+ D E  G  E +SEE
Sbjct: 181 ATTPPPESAEED-EAKGNAEAQSEE 204

[Close]

BLAST of Sed0011604 vs. ExPASy TrEMBL
Match: A0A6J1D1H7 (LIM domain-containing protein PLIM2c-like OS=Momordica charantia OX=3673 GN=LOC111016415 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.2e-98
Identity = 178/208 (85.58%), Postives = 190/208 (91.35%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNF--QKSSDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVS 120
           HFEQLFKESGNFSKNF   K S+KQN+LTR PSKLSSMFSGTQDKC+ CSKTVYPLEKV+
Sbjct: 61  HFEQLFKESGNFSKNFHASKPSEKQNDLTRAPSKLSSMFSGTQDKCSVCSKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKA 180
           LEGECYHK CFRCAHGGCNLTHS+ AALDGVLYCKHHFAQLFMVKGNYNHVL+AAANKKA
Sbjct: 121 LEGECYHKTCFRCAHGGCNLTHSNAAALDGVLYCKHHFAQLFMVKGNYNHVLQAAANKKA 180

Query: 181 TTPPAEHADADAEEDGKPEPESEEQPVE 207
           +TPP E AD +AE    P+ +SE+  VE
Sbjct: 181 STPPPEPADDEAE----PQAQSEDHDVE 204

[Close]

BLAST of Sed0011604 vs. ExPASy TrEMBL
Match: A0A6J1IRA7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC111479786 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.2e-98
Identity = 180/209 (86.12%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKCKACDKTVYVV+LLSLEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQ--KSSDKQNEL-TRTPSKLSSMFSGTQDKCTACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ  K S+KQN++ +R PSKLSSMFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 SLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK 180
           +LEGECYHK CFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFM+KGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPAEHADADAEEDGKPEPESEEQPVE 207
           ATTPP E A+ D E  G  E +SEE  VE
Sbjct: 181 ATTPPPESAEED-EAKGNAEAQSEEGAVE 208

[Close]

BLAST of Sed0011604 vs. TAIR 10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 305.4 bits (781), Expect = 3.4e-83
Identity = 140/195 (71.79%), Postives = 160/195 (82.05%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKC  CDKTVYVVD+LS+EG PYHK+CF+C+HCKGTL MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQKSSDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVSLE 120
           HFEQLFKESGNFSKNFQ    ++ ELTRTPSK+SS+F GTQDKC AC KTVYPLEK+ +E
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQME 120

Query: 121 GECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKA-- 180
           GEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA +++   
Sbjct: 121 GECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTAS 180

Query: 181 --TTPPAEHADADAE 192
             T PP    D   E
Sbjct: 181 GNTLPPEPTEDVAVE 195

[Close]

BLAST of Sed0011604 vs. TAIR 10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 296.6 bits (758), Expect = 1.6e-80
Identity = 147/220 (66.82%), Postives = 170/220 (77.27%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGTLDKCKACDKTVYV+DLL+LEGN YHK+CF+C+HCKGTL +S+YS MDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQ--KSSDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVS 120
           HFEQLFKESGN+SKNFQ  K+    + LTRTPSKLSS FSGTQDKC  C KTVYPLEKV+
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK- 180
           +EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 ------ATTPPAEHADADA-------EEDGKPEPESEEQP 205
                 A+ P  +H   D        E+D  PE   EE+P
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKEDDAAPEAAGEEEP 220

[Close]

BLAST of Sed0011604 vs. TAIR 10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 296.2 bits (757), Expect = 2.0e-80
Identity = 143/207 (69.08%), Postives = 165/207 (79.71%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKPH 61
           AFTGT DKCKACDKTVYV+DL++LEG PYHK+CF+CSHC GTL + +YS MDGVLYCK H
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQKS--SDKQNELTRTPSKLSSMFSGTQDKCTACSKTVYPLEKVSL 121
           FEQLFKESGNFSKNFQ +  ++K N+ T+ P++LSS FSGTQDKC AC KTVYPLEK+++
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKAT 181
           EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 TPPAEHADADAEEDGKPEPESEEQPVE 207
           T         AEED     E E  P E
Sbjct: 183 T---------AEEDKTEPKEDEANPTE 200

[Close]

BLAST of Sed0011604 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 268.9 bits (686), Expect = 3.5e-72
Identity = 120/182 (65.93%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGT  KCKAC+KTVY V+LLS +G  YHK+CFKC+HCK  L +SSYS M+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQ---KSSDKQN-ELTRTPSKLSSMFSGTQDKCTACSKTVYPLEK 120
           HFEQLFKESG+F+KNFQ   KS+DK   ELTRTPS+++  FSGTQ+KC  CSKTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VSLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANK 179
           V++E + YHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

[Close]

BLAST of Sed0011604 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 268.9 bits (686), Expect = 3.5e-72
Identity = 120/182 (65.93%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           M+FTGT  KCKAC+KTVY V+LLS +G  YHK+CFKC+HCK  L +SSYS M+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQ---KSSDKQN-ELTRTPSKLSSMFSGTQDKCTACSKTVYPLEK 120
           HFEQLFKESG+F+KNFQ   KS+DK   ELTRTPS+++  FSGTQ+KC  CSKTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VSLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANK 179
           V++E + YHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

The following BLAST results are available for this feature:

BLAST of Sed0011604 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133874.1	1.1e-101	88.89	LIM domain-containing protein PLIM2b [Cucumis sativus] >KGN56534.1 hypothetical ...	[more]
XP_038891791.1	7.5e-101	87.92	LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida]	[more]
XP_038891725.1	9.7e-101	87.50	LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida]	[more]
XP_008438068.1	2.2e-100	87.44	PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo]	[more]
XP_022924376.1	2.0e-98	87.32	LIM domain-containing protein PLIM2c-like [Cucurbita moschata]	[more]

BLAST of Sed0011604 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1ECF5	4.7e-82	71.79	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
O80839	2.2e-79	66.82	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q500W4	2.9e-79	69.08	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]
Q9M047	4.9e-71	65.93	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O04193	1.1e-70	63.08	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]

BLAST of Sed0011604 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6A8	5.6e-102	88.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1	[more]
A0A1S3AVG8	1.0e-100	87.44	LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC10348328...	[more]
A0A6J1E9B9	9.8e-99	87.32	LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1D1H7	2.2e-98	85.58	LIM domain-containing protein PLIM2c-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1IRA7	2.2e-98	86.12	LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Sed0011604 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01780.1	3.4e-83	71.79	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	1.6e-80	66.82	GATA type zinc finger transcription factor family protein	[more]
AT3G61230.1	2.0e-80	69.08	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	3.5e-72	65.93	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	3.5e-72	65.93	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 9..61 e-value: 1.1E-12 score: 58.1 coord: 103..155 e-value: 8.9E-13 score: 58.5
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 104..159 e-value: 1.1E-10 score: 41.5 coord: 10..65 e-value: 6.0E-13 score: 48.8
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 102..162 score: 12.3652
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.4344
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 6..74 e-value: 4.9E-19 score: 70.3 coord: 98..168 e-value: 4.1E-19 score: 70.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..206
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..201
None	No IPR available	PANTHER	PTHR24206:SF69	LIM DOMAIN-CONTAINING PROTEIN PLIM2C	coord: 1..201
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 6..68 e-value: 1.13646E-37 score: 123.344
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 130..169
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 2..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 96..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011604.1	Sed0011604.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding