Sed0011484 (gene) Chayote v1

Overview


Name	Sed0011484
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein transport protein SEC13 homolog B
Location	LG06: 45439401 .. 45443558 (+)
RNA-Seq Expression	Sed0011484
Synteny	Sed0011484

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCATCGCTCAGATTTCAGAACCGCCATTGAAGACCACCAGGAACTCAATTTCTGTACCTTCTTCTTCAATCCTTCGCATCGATACCGATCCAATTGTCTCCAGAATCTAAGGTTTCCTTCGTTTCCATCTTTATTGCAAAATTTATTTGGATTCATTTTTATTTGTTGGATTCATGTCTGTTCGCTGTGTAAATTTTCTGCAATGGGTTTCCCGTGATCTAATTGGGGTTTTCTTGAACTTCTTGCTGATTTTAGATGGCCTAATTGGCTGATTTGTCCCGATTCGTTTGTACGATCGTGAAACTGGAAATTAGGGCTTGCTGTTTTAATTATATCTGATCTAGTTATGGCTAAGGTGAATCAAGAGTGTTATGTTCGTGAAATTTTCTTTTGGATTGGTTTGTGTGTTCGCACTCGTGAGGAGGTTTGTTGTTGATTTAATTTGCTATAATTTAAGCTCGTGATTTAACACCTTTTTAGTTATAGTAATGAATTGGGATCGAAAGTGAGGAGGTTCTTGTTTGGTATCCGAGTAGTCAGTTTGATGTTTGTTTGTTCAATTATTTTGTCGTAGTTATTTCGGCAATTCTACATTTCGAAGGAACATGATAACAGCAATTCCAAAGTAGAAACCAATTTCTGCATTTCCTTGAATTTTAAAGGTGAAGGCCCATTTGATAACCATTTGGTTTTTGTTTTTGATTTATGAAATTTAAGCTTATTTCTACCAAATTTCCTAGCATGTACTCTACCTTCCTACCATGTATCCATATTTCCTTAAGAAAGTAGGTGAATATTAACCAAATTTCAAAAACAAAAACAAGCTTTTGGAAACTACTTTTTTTTTGTTTCCAAATTTTGGTTTTGTTTATTAAAATATAGGTAAGATGTAGATATCCAAATAAGGAAAAATGTATAGTAAGGTATACCTGGAATGTCTTTGATATCTTGGCTGCCAAAAATTGAACTCTTGGCACACAATTCAGAATAGTTCAGAAGATATACCTGCAATACTCTCATTAGTGTTCTTGTGTGTGTGGGGAAGAAAGGAAAGACTCTGAACACATTTTCTTTAATGGTCACTTGGTGGTTGATGTTTTCAATTTTTTTAAATTAGGTGGTTTAACACTCAAAAGAATCAAAACATCCTAGATTTCCTTTTGCATCTTTTGACTTGCCTTTGTTTAGGTTGTAAATCCTATGGGAGTATTTGGACCTTCGTTTAGGAAGTGGGTTAGGTTGAGTTATAATAACTCAATTCAACTCGTGTTTGGGCCATTGTTTATAATACTTGTTGGGTTAATCTGTAACCCCTCATCCATGTTACTATAATTCTTGTTATAGTAAATTCCGGTGCCTGGCCTAGGGACGAGAGTGGTTACCCTTGTTTAAAAAAAAATTCATGTTATAGTAAAAGATTATGGGGTGTCTGGATGAGTAGTTGCTGAGGAGATATTTTGAGTGATTAAAATGATTAGTTATTTTGAGTTATTGGAAATTGAGATTTTTGTAATAGCTCGTTTGAATGTGGATTTTTGTAGAAGAATTGCAGGCAATAGTTAGTTTGGATATAAATTTTTGTAGAGGAGTTGCAACCAATAGCTTGCTTGGATGTGGATTTTGTAGAGGAGTTGCATAAATAAGTGGTGTGAAATGATGAGTTATTTTGAATGAATAGAAATGAGTAGTTATTTTGAGTGATTGCAATAGCTCGTTTCATATAGTTGTTTGAGGAAAAGTTGTAAATGTTCCTTAGAATCAACAAACAAACAACCCCTATGTTGTAATAATTTTCTATTATTATAACCTCCATCTCAAACACAGGTTATTATATTCTCTGTTATAATAATTTGCATCAAACACGGGTTATAGTAACCCTTCTAATATAATAACCTACCGTTGAAACAACCCAAATGTCACCCAAAACGTACCCTTGTATTATATTGCTGAAGGTAAGCTGGATGACTTGCTGGACATCTGGTTATAGAGCGGTTGCAAAGTTTGTTTGTATAAAACAGAGTTGACTTGGATATTTTTACTACGGCTTTTTACCTGGTTTAATGGCTATTGTAGATGTTCCTGTTTTTAGCATAATTAATTTTACATGGGAGTGTTTTTAGCTATCTTATGTGATCTTGGACGGGGCAGATGGCAGATTGTTTTGTCTTCCATTCTTGATTATTATATACATGTATTTTTAATATGTTGTTTCTTATCCCAAAAGGAAAGAGTTGTCTAAAATTGTGCTTGCTCTGTTTTCCTCCTTGATTCATATTTATATTCGTTTTCTATTTCTAATATGTTATTACTTATCCAAAAAAGAAACAAATAAGTTTTGTGGAATATGCTTGTTCTGTTTCTTTCTTGATTAATACGTTTCTATTTCTTATATTGCTATTTCTTATCCAAAAAAGAAGAGTTTTTTGGAAATGTGCTTTCTCTACTTTTATTCTTAACATGATATTTCTTGTGACATGCTTTTGGGTTGTTCGACATTTTAGACTTTTTAGTAAGGAATATTTGCCACTTCTAGTACAGCAGTCCGCATCACAAACGCTCATTTTTAGGTTTTTGACACATTTTTCTTTGAAGCTTTGGCTGCATTCTTGCGATGCCTTTCTTCATAAGTTCTTTTCTATTATACTATTTACATTGTTCTATTCCTGGACAATAATGTGAGATATGGAAATCAAACCGTTGGAAGGATAGAAAAAAAAGGGTCATATGGTAGGACTGTTCATGCTGACATTGAATAGCCATTGCTTAAGACTAAATTTATGTATGCTTTGAGACAACCAAGTTTTTAAATTCCCTTATAATATTTATGAAAAATATCATGCTTTATAATGTGAATTTTCCACAGAGATAAACTAAGAGGAAAATCAAATACCAATCCCAGCTCCTATTGTTGACGGTTGAATTATTAGCTAGGGAAAATGCCTGCTCAAAAGATTGAAACCGGTCACCAAGACACCATCCATGATGTTGCAATGGATTATTACGGTAAGCGTGTTGCTTCCGCTTCGTCTGACCAGACCATCAAGATCACTGGTGTAAGCAACTCGGCCACTCAACATCTTGCAACGCTGACCGGTCACCTAGGTCCTGTATGGCAGGTAGCCTGGGCTCACCCAAAATTTGGTTCTTTACTTGCTTCATGTTCTTATGATGGCCGTGTCATATTATGGAAGGAAGGCAATCAAAACGAGTGGTCACAAGCCCATGTATTCGATGATCATAAATCATCTGTTAACTCAATTGCTTGGGCCCCTCATGAAGTGGGTCTCTGTTTGGCATGTGGTTCATCTGATGGAAACATCTCTGTGTTCACTGCAAGAGCAGATGGTGGTTGGGACACTTCTAGAATTGATCAAGCTCACCCGGTGGGTGTGACGTCTGTTTCATGGGCTCCATCTACTGCACCGGGAGCCCTTGTCGGCTCTGGCTTACTCGATCCTGTTCAGAAGCTTTGCTCGGGTGGCTGTGACAATACAGTAAAGGTGTGGAAGCTCTACAATGGGGTTTGGAAGATGGACTGCTTCCCAGCTCTTCAAATGCACACTGACTGGGTTAGAGATGTTTCATGGGCTCCTAACCTCGGTCTGCCGAAATCGACAATCGCAAGCGCCTCGCAGGACGGGAAAGTTGTTATATGGACCGTAGTTAAGGAAGGAGATCAATGGGAAGGGAAGGTACTTAAGGACTTCCAAACCCCTGTTTGGAGGGTATCATGGTCATTAACAGGCAACATTTTGGCTGTGGCTGATGGAAACAACAATGTTAGTTTGTGGAAGGAAGCTGTGGATGGCGATTGGCAACAGGTTTCAACAGTTGAGCCTTAGTTTCCTCTGTTTTAGTTCTTTTCTTTACTTGAACAACACCCACAAAGTACCCTTTGCCTCTAAAATGTCACACATTTTTTAATAATCGACTTAATTTCACTTTTTCAGGACAAATTTACGTGCACCTTAACTATTCTCCATACCGTTTGTTTCTAACTTTTATCAATTTAAGACCTTCAAATTCCGAGAGCTTAGAGAGTATTGACTTGGTTTGTTCTTAATACAATTATGATAGGAGTGGAGAATTGAATCAATGGTAGTTGTTACATTATCTTCTACTAAGTTATGTTTGGACTTTGGGTATTTATATTCAG

mRNA sequence

ACCCATCGCTCAGATTTCAGAACCGCCATTGAAGACCACCAGGAACTCAATTTCTGTACCTTCTTCTTCAATCCTTCGCATCGATACCGATCCAATTGTCTCCAGAATCTAAGAGATAAACTAAGAGGAAAATCAAATACCAATCCCAGCTCCTATTGTTGACGGTTGAATTATTAGCTAGGGAAAATGCCTGCTCAAAAGATTGAAACCGGTCACCAAGACACCATCCATGATGTTGCAATGGATTATTACGGTAAGCGTGTTGCTTCCGCTTCGTCTGACCAGACCATCAAGATCACTGGTGTAAGCAACTCGGCCACTCAACATCTTGCAACGCTGACCGGTCACCTAGGTCCTGTATGGCAGGTAGCCTGGGCTCACCCAAAATTTGGTTCTTTACTTGCTTCATGTTCTTATGATGGCCGTGTCATATTATGGAAGGAAGGCAATCAAAACGAGTGGTCACAAGCCCATGTATTCGATGATCATAAATCATCTGTTAACTCAATTGCTTGGGCCCCTCATGAAGTGGGTCTCTGTTTGGCATGTGGTTCATCTGATGGAAACATCTCTGTGTTCACTGCAAGAGCAGATGGTGGTTGGGACACTTCTAGAATTGATCAAGCTCACCCGGTGGGTGTGACGTCTGTTTCATGGGCTCCATCTACTGCACCGGGAGCCCTTGTCGGCTCTGGCTTACTCGATCCTGTTCAGAAGCTTTGCTCGGGTGGCTGTGACAATACAGTAAAGGTGTGGAAGCTCTACAATGGGGTTTGGAAGATGGACTGCTTCCCAGCTCTTCAAATGCACACTGACTGGGTTAGAGATGTTTCATGGGCTCCTAACCTCGGTCTGCCGAAATCGACAATCGCAAGCGCCTCGCAGGACGGGAAAGTTGTTATATGGACCGTAGTTAAGGAAGGAGATCAATGGGAAGGGAAGGTACTTAAGGACTTCCAAACCCCTGTTTGGAGGGTATCATGGTCATTAACAGGCAACATTTTGGCTGTGGCTGATGGAAACAACAATGTTAGTTTGTGGAAGGAAGCTGTGGATGGCGATTGGCAACAGGTTTCAACAGTTGAGCCTTAGTTTCCTCTGTTTTAGTTCTTTTCTTTACTTGAACAACACCCACAAAGTACCCTTTGCCTCTAAAATGTCACACATTTTTTAATAATCGACTTAATTTCACTTTTTCAGGACAAATTTACGTGCACCTTAACTATTCTCCATACCGTTTGTTTCTAACTTTTATCAATTTAAGACCTTCAAATTCCGAGAGCTTAGAGAGTATTGACTTGGTTTGTTCTTAATACAATTATGATAGGAGTGGAGAATTGAATCAATGGTAGTTGTTACATTATCTTCTACTAAGTTATGTTTGGACTTTGGGTATTTATATTCAG

Coding sequence (CDS)

ATGCCTGCTCAAAAGATTGAAACCGGTCACCAAGACACCATCCATGATGTTGCAATGGATTATTACGGTAAGCGTGTTGCTTCCGCTTCGTCTGACCAGACCATCAAGATCACTGGTGTAAGCAACTCGGCCACTCAACATCTTGCAACGCTGACCGGTCACCTAGGTCCTGTATGGCAGGTAGCCTGGGCTCACCCAAAATTTGGTTCTTTACTTGCTTCATGTTCTTATGATGGCCGTGTCATATTATGGAAGGAAGGCAATCAAAACGAGTGGTCACAAGCCCATGTATTCGATGATCATAAATCATCTGTTAACTCAATTGCTTGGGCCCCTCATGAAGTGGGTCTCTGTTTGGCATGTGGTTCATCTGATGGAAACATCTCTGTGTTCACTGCAAGAGCAGATGGTGGTTGGGACACTTCTAGAATTGATCAAGCTCACCCGGTGGGTGTGACGTCTGTTTCATGGGCTCCATCTACTGCACCGGGAGCCCTTGTCGGCTCTGGCTTACTCGATCCTGTTCAGAAGCTTTGCTCGGGTGGCTGTGACAATACAGTAAAGGTGTGGAAGCTCTACAATGGGGTTTGGAAGATGGACTGCTTCCCAGCTCTTCAAATGCACACTGACTGGGTTAGAGATGTTTCATGGGCTCCTAACCTCGGTCTGCCGAAATCGACAATCGCAAGCGCCTCGCAGGACGGGAAAGTTGTTATATGGACCGTAGTTAAGGAAGGAGATCAATGGGAAGGGAAGGTACTTAAGGACTTCCAAACCCCTGTTTGGAGGGTATCATGGTCATTAACAGGCAACATTTTGGCTGTGGCTGATGGAAACAACAATGTTAGTTTGTGGAAGGAAGCTGTGGATGGCGATTGGCAACAGGTTTCAACAGTTGAGCCTTAG

Protein sequence

MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQVAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCSGGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIWTVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVEP

Homology

[Close]

BLAST of Sed0011484 vs. NCBI nr
Match: KAG7018318.1 (Protein transport protein SEC13-like B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 638.3 bits (1645), Expect = 3.4e-179
Identity = 297/301 (98.67%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60
           MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ
Sbjct: 88  MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 147

Query: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAH+FDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 148 VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 207

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS LLDPVQKLCS
Sbjct: 208 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 267

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 268 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 327

Query: 241 TVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVV+EGDQWEGKVLKDF+TPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE
Sbjct: 328 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 387

Query: 301 P 302
           P
Sbjct: 388 P 388

[Close]

BLAST of Sed0011484 vs. NCBI nr
Match: XP_023528381.1 (protein transport protein SEC13 homolog B [Cucurbita pepo subsp. pepo] >XP_023528382.1 protein transport protein SEC13 homolog B [Cucurbita pepo subsp. pepo] >XP_023528383.1 protein transport protein SEC13 homolog B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 638.3 bits (1645), Expect = 3.4e-179
Identity = 297/301 (98.67%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60
           MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ
Sbjct: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAH+FDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS LLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVV+EGDQWEGKVLKDF+TPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE
Sbjct: 241 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0011484 vs. NCBI nr
Match: XP_022980068.1 (protein transport protein SEC13 homolog B [Cucurbita maxima] >XP_022980069.1 protein transport protein SEC13 homolog B [Cucurbita maxima] >XP_022980070.1 protein transport protein SEC13 homolog B [Cucurbita maxima])

HSP 1 Score: 636.0 bits (1639), Expect = 1.7e-178
Identity = 296/301 (98.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60
           MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ
Sbjct: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAH+FDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS LLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVV+EGDQWEGKVLKDF+TPVWRVSWSLTGNILAVADGNNNVSLWKEAVD DWQQVSTVE
Sbjct: 241 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDSDWQQVSTVE 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0011484 vs. NCBI nr
Match: XP_022955988.1 (protein transport protein SEC13 homolog B [Cucurbita moschata] >XP_022955989.1 protein transport protein SEC13 homolog B [Cucurbita moschata] >XP_022955990.1 protein transport protein SEC13 homolog B [Cucurbita moschata])

HSP 1 Score: 635.2 bits (1637), Expect = 2.9e-178
Identity = 296/301 (98.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60
           MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ
Sbjct: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAH+FDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS LLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWA NLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWASNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVV+EGDQWEGKVLKDF+TPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE
Sbjct: 241 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0011484 vs. NCBI nr
Match: XP_016900431.1 (PREDICTED: protein transport protein SEC13 homolog B [Cucumis melo] >XP_016900432.1 PREDICTED: protein transport protein SEC13 homolog B [Cucumis melo] >XP_016900433.1 PREDICTED: protein transport protein SEC13 homolog B [Cucumis melo] >KAA0050817.1 protein transport protein SEC13-like protein B [Cucumis melo var. makuwa] >TYK08528.1 protein transport protein SEC13-like protein B [Cucumis melo var. makuwa])

HSP 1 Score: 630.2 bits (1624), Expect = 9.3e-177
Identity = 292/301 (97.01%), Postives = 296/301 (98.34%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60
           MP QKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGH GPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFG LLASCSYDGRVI+WKEGNQNEWSQAH+FDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST PGALVGS LLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVVKEGDQWEGKVLKDF+TPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV+
Sbjct: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVD 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0011484 vs. ExPASy Swiss-Prot
Match: O64740 (Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC13B PE=1 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 1.4e-159
Identity = 256/302 (84.77%), Postives = 281/302 (93.05%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNS-ATQHLATLTGHLGPVW 60
           MP QKIETGH+D +HDV MDYYGKR+A+ASSD TIKITGVSN+  +Q LATLTGH GPVW
Sbjct: 1   MPGQKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCL 120
           +VAWAHPK+GS+LASCSYDG+VILWKEGNQN+W+Q HVF DHKSSVNSIAWAPH++GL L
Sbjct: 61  EVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120

Query: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLC 180
           ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP+TAPGALV SGLLDPV KL 
Sbjct: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLA 180

Query: 181 SGGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVI 240
           SGGCDNTVKVWKL NG WKMDCFPALQ HTDWVRDV+WAPNLGLPKSTIAS SQDGKV+I
Sbjct: 181 SGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVII 240

Query: 241 WTVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
           WTV KEG+QWEGKVLKDF TPVWRVSWSLTGN+LAV+DGNNNV++WKEAVDG+W+QV+ V
Sbjct: 241 WTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAV 300

Query: 301 EP 302
           EP
Sbjct: 301 EP 302

[Close]

BLAST of Sed0011484 vs. ExPASy Swiss-Prot
Match: Q9SRI1 (Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC13A PE=1 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 6.5e-157
Identity = 250/302 (82.78%), Postives = 279/302 (92.38%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNS-ATQHLATLTGHLGPVW 60
           MP QKIETGH DTIHDV MDYYGKRVA+ASSD TIKITGVSNS  +QHLATLTGH GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCL 120
           QVAWAHPKFGSLLASCSYDG++ILWKEGNQN+W+QAHVF DHK SVNSIAWAPHE+GL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLC 180
           ACG+SDGNISVF+ARADGGWDT++IDQAHPVGVTSVSWAP+T PGALV SG++DPV KL 
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVI 240
           SGGCD+TVKVWK  NG WKMDCFPAL  HTDWVRDV+WAPNLGLPKSTIAS S+DGKV+I
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WTVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
           WT+ KEG+QWEG VLKDF+TPVWRVSWSLTGN+LAV+DGNNNV++WKE+VDG+W+QV+ V
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300

Query: 301 EP 302
           EP
Sbjct: 301 EP 302

[Close]

BLAST of Sed0011484 vs. ExPASy Swiss-Prot
Match: Q9D1M0 (Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3)

HSP 1 Score: 339.7 bits (870), Expect = 3.3e-92
Identity = 159/299 (53.18%), Postives = 208/299 (69.57%), Query Frame = 0


Query: 6   IETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQVAWAH 65
           ++T H+D IHD  MDYYG R+A+ SSD+++KI  V N     +A L GH GPVWQVAWAH
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67

Query: 66  PKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLACGSSD 125
           P +G++LASCSYD +VI+WKE N   W + H    H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68  PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSD 127

Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGLL-DPVQKLCSGG 185
           G IS+ T   +G W+  +I+ AH +G  +VSWAP+  PG+L+   SG   + ++K  SGG
Sbjct: 128 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 187

Query: 186 CDNTVKVWK-LYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIWT 245
           CDN +K+W+   +G WK +    L+ H+DWVRDV+WAP++GLP STIAS SQDG+V IWT
Sbjct: 188 CDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 247

Query: 246 V-VKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
                G+ W  K+L  F   VW VSWS+T NILAV+ G+N V+LWKE+VDG W  +S V
Sbjct: 248 CDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of Sed0011484 vs. ExPASy Swiss-Prot
Match: Q5XFW8 (Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 3.3e-92
Identity = 159/299 (53.18%), Postives = 208/299 (69.57%), Query Frame = 0


Query: 6   IETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQVAWAH 65
           ++T H+D IHD  MDYYG R+A+ SSD+++KI  V N     +A L GH GPVWQVAWAH
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67

Query: 66  PKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLACGSSD 125
           P +G++LASCSYD +VI+WKE N   W + H    H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68  PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSD 127

Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGLL-DPVQKLCSGG 185
           G IS+ T   +G W+  +I+ AH +G  +VSWAP+  PG+L+   SG   + ++K  SGG
Sbjct: 128 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 187

Query: 186 CDNTVKVWK-LYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIWT 245
           CDN +K+W+   +G WK +    L+ H+DWVRDV+WAP++GLP STIAS SQDG+V IWT
Sbjct: 188 CDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 247

Query: 246 V-VKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
                G+ W  K+L  F   VW VSWS+T NILAV+ G+N V+LWKE+VDG W  +S V
Sbjct: 248 CDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of Sed0011484 vs. ExPASy Swiss-Prot
Match: Q3ZCC9 (Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.1e-91
Identity = 159/299 (53.18%), Postives = 207/299 (69.23%), Query Frame = 0


Query: 6   IETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQVAWAH 65
           ++T H+D IHD  MDYYG R+A+ SSD+++KI  V N     +A L GH GPVWQVAWAH
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAH 67

Query: 66  PKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLACGSSD 125
           P +G++LASCSYD +VI+WKE N   W + H    H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68  PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSD 127

Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGLL-DPVQKLCSGG 185
           G IS+ T    G W+  +I+ AH +G  +VSWAP+  PG+L+   SG   + ++K  SGG
Sbjct: 128 GAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 187

Query: 186 CDNTVKVWK-LYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIWT 245
           CDN +K+WK   +G WK +    L+ H+DWVRDV+WAP++GLP STIAS SQDG+V +WT
Sbjct: 188 CDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWT 247

Query: 246 V-VKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
                G+ W  K+L  F   VW VSWS+T NILAV+ G+N V+LWKE+VDG W  +S V
Sbjct: 248 CDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of Sed0011484 vs. ExPASy TrEMBL
Match: A0A6J1IY63 (protein transport protein SEC13 homolog B OS=Cucurbita maxima OX=3661 GN=LOC111479584 PE=3 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 8.2e-179
Identity = 296/301 (98.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60
           MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ
Sbjct: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAH+FDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS LLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVV+EGDQWEGKVLKDF+TPVWRVSWSLTGNILAVADGNNNVSLWKEAVD DWQQVSTVE
Sbjct: 241 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDSDWQQVSTVE 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0011484 vs. ExPASy TrEMBL
Match: A0A6J1GWL3 (protein transport protein SEC13 homolog B OS=Cucurbita moschata OX=3662 GN=LOC111457822 PE=3 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 1.4e-178
Identity = 296/301 (98.34%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60
           MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ
Sbjct: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAH+FDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS LLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWA NLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWASNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVV+EGDQWEGKVLKDF+TPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE
Sbjct: 241 TVVREGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0011484 vs. ExPASy TrEMBL
Match: A0A1S4DWT1 (protein transport protein SEC13 homolog B OS=Cucumis melo OX=3656 GN=LOC103489960 PE=3 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 4.5e-177
Identity = 292/301 (97.01%), Postives = 296/301 (98.34%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60
           MP QKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGH GPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFG LLASCSYDGRVI+WKEGNQNEWSQAH+FDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST PGALVGS LLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVVKEGDQWEGKVLKDF+TPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV+
Sbjct: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVD 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0011484 vs. ExPASy TrEMBL
Match: A0A5D3CBF9 (Protein transport protein SEC13-like protein B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00660 PE=3 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 4.5e-177
Identity = 292/301 (97.01%), Postives = 296/301 (98.34%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60
           MP QKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGH GPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFG LLASCSYDGRVI+WKEGNQNEWSQAH+FDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST PGALVGS LLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVVKEGDQWEGKVLKDF+TPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV+
Sbjct: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVD 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0011484 vs. ExPASy TrEMBL
Match: A0A0A0LDB9 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G462670 PE=3 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 5.9e-177
Identity = 292/301 (97.01%), Postives = 296/301 (98.34%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQ 60
           MP QKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGH GPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 61  VAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLA 120
           VAWAHPKFG LLASCSYDGRVI+WKEGNQNEWSQAH+FDDHKSSVNSIAWAPHEVGLCLA
Sbjct: 61  VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA 120

Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCS 180
           CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST PGALVGS LLDPVQKLCS
Sbjct: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS 180

Query: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240
           GGCDNTVKVWKLYNGVWKMDCFPALQMH+DWVRDVSWAPNLGLPKSTIASASQDGKVVIW
Sbjct: 181 GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW 240

Query: 241 TVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300
           TVVKEGDQWEGKVLKDF+TPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE
Sbjct: 241 TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0011484 vs. TAIR 10
Match: AT2G30050.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 563.5 bits (1451), Expect = 1.0e-160
Identity = 256/302 (84.77%), Postives = 281/302 (93.05%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNS-ATQHLATLTGHLGPVW 60
           MP QKIETGH+D +HDV MDYYGKR+A+ASSD TIKITGVSN+  +Q LATLTGH GPVW
Sbjct: 1   MPGQKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCL 120
           +VAWAHPK+GS+LASCSYDG+VILWKEGNQN+W+Q HVF DHKSSVNSIAWAPH++GL L
Sbjct: 61  EVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120

Query: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLC 180
           ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP+TAPGALV SGLLDPV KL 
Sbjct: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLA 180

Query: 181 SGGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVI 240
           SGGCDNTVKVWKL NG WKMDCFPALQ HTDWVRDV+WAPNLGLPKSTIAS SQDGKV+I
Sbjct: 181 SGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVII 240

Query: 241 WTVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
           WTV KEG+QWEGKVLKDF TPVWRVSWSLTGN+LAV+DGNNNV++WKEAVDG+W+QV+ V
Sbjct: 241 WTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAV 300

Query: 301 EP 302
           EP
Sbjct: 301 EP 302

[Close]

BLAST of Sed0011484 vs. TAIR 10
Match: AT3G01340.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 554.7 bits (1428), Expect = 4.6e-158
Identity = 250/302 (82.78%), Postives = 279/302 (92.38%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNS-ATQHLATLTGHLGPVW 60
           MP QKIETGH DTIHDV MDYYGKRVA+ASSD TIKITGVSNS  +QHLATLTGH GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCL 120
           QVAWAHPKFGSLLASCSYDG++ILWKEGNQN+W+QAHVF DHK SVNSIAWAPHE+GL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLC 180
           ACG+SDGNISVF+ARADGGWDT++IDQAHPVGVTSVSWAP+T PGALV SG++DPV KL 
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVI 240
           SGGCD+TVKVWK  NG WKMDCFPAL  HTDWVRDV+WAPNLGLPKSTIAS S+DGKV+I
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WTVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
           WT+ KEG+QWEG VLKDF+TPVWRVSWSLTGN+LAV+DGNNNV++WKE+VDG+W+QV+ V
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300

Query: 301 EP 302
           EP
Sbjct: 301 EP 302

[Close]

BLAST of Sed0011484 vs. TAIR 10
Match: AT3G01340.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 554.7 bits (1428), Expect = 4.6e-158
Identity = 250/302 (82.78%), Postives = 279/302 (92.38%), Query Frame = 0


Query: 1   MPAQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNS-ATQHLATLTGHLGPVW 60
           MP QKIETGH DTIHDV MDYYGKRVA+ASSD TIKITGVSNS  +QHLATLTGH GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCL 120
           QVAWAHPKFGSLLASCSYDG++ILWKEGNQN+W+QAHVF DHK SVNSIAWAPHE+GL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLC 180
           ACG+SDGNISVF+ARADGGWDT++IDQAHPVGVTSVSWAP+T PGALV SG++DPV KL 
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGCDNTVKVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVI 240
           SGGCD+TVKVWK  NG WKMDCFPAL  HTDWVRDV+WAPNLGLPKSTIAS S+DGKV+I
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WTVVKEGDQWEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTV 300
           WT+ KEG+QWEG VLKDF+TPVWRVSWSLTGN+LAV+DGNNNV++WKE+VDG+W+QV+ V
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300

Query: 301 EP 302
           EP
Sbjct: 301 EP 302

[Close]

BLAST of Sed0011484 vs. TAIR 10
Match: AT1G64350.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 5.7e-15
Identity = 75/313 (23.96%), Postives = 127/313 (40.58%), Query Frame = 0


Query: 23  GKRVASASSDQTIKITGVSNSATQHLATLTG---HLGPVWQVAWAHPKFGSLLASCSYDG 82
           G R+A+ S +  + I   S S++   +  +        + ++ W   ++G  +A    DG
Sbjct: 21  GDRLAAGSLNGKLSIYESSTSSSSTFSCTSKVRVSESSIVKIVWLPSEYGDAVACVCEDG 80

Query: 83  RVILWKEGNQN----EWSQAHVFDDHKSSVNSIAWAPHEVGLCLACGSSDGNISVFTARA 142
            + +W+E +++    EW       +  S V  + +      L +    SDG + VF    
Sbjct: 81  SLSIWEELSEDAHGLEWKLCKSMKNKSSQVLDVQFGVSRKSLKMVAAYSDGYLRVFELLN 140

Query: 143 D---GGWDTSR-----IDQAHPVG-----VTSVSWAP----STAPGALVGSGLLDPVQKL 202
                 W         ID    +G       SVSW P       P  ++      P    
Sbjct: 141 PLELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPMKGEEQEPSFVLAFNSDSPHL-- 200

Query: 203 CSGGCDNTVKVWKL--YNGVWKMDCFPAL-QMHTDWVRDVSWAPNLGLPKSTIASASQDG 262
                 N+ K+W+    +  W      AL +   D V  +SWAPN+G P   +A A+  G
Sbjct: 201 ------NSSKIWEFDEAHNRWLAVAELALPEDKGDPVYALSWAPNIGRPYEVVAVATHKG 260

Query: 263 KVVIWTVVKEGDQWEGKV-------LKDFQTPVWRVSWSLTGNILAVADGNNNVSLWKEA 302
            + IW V    D  EG++       L   Q  VW++ W ++G  LA    +  V LW+  
Sbjct: 261 -IGIWHVGLAPD-LEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSN 320

[Close]

BLAST of Sed0011484 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 2.0e-12
Identity = 69/284 (24.30%), Postives = 112/284 (39.44%), Query Frame = 0


Query: 8   TGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHLGPVWQVAWAHPK 67
           +GH   ++ +  +  G  +AS S D+ I +  V     ++   L GH   +  + W    
Sbjct: 50  SGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDC-KNFMVLKGHKNAILDLHWTSD- 109

Query: 68  FGSLLASCSYDGRVILWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHEVGLCLACGSSDGN 127
            GS + S S D  V  W   +     Q     +H S VNS         L ++ GS DG 
Sbjct: 110 -GSQIVSASPDKTVRAW---DVETGKQIKKMAEHSSFVNSCCPTRRGPPLIIS-GSDDGT 169

Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCSGGCDNTV 187
             ++  R  G   T          +T+VS++              D   K+ +GG DN V
Sbjct: 170 AKLWDMRQRGAIQTF----PDKYQITAVSFS--------------DAADKIFTGGVDNDV 229

Query: 188 KVWKLYNGVWKMDCFPALQMHTDWVRDVSWAPNLGLPKSTIASASQDGKVVIWTVVKEGD 247
           KVW L  G   M     L+ H D +  +S +P+     S + +   D K+ +W +     
Sbjct: 230 KVWDLRKGEATM----TLEGHQDTITGMSLSPD----GSYLLTNGMDNKLCVWDMRPYAP 289

Query: 248 Q------WEGKVLKDFQTPVWRVSWSLTGNILAVADGNNNVSLW 286
           Q      +EG    +F+  + + SWS  G  +     +  V +W
Sbjct: 290 QNRCVKIFEGH-QHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIW 299

The following BLAST results are available for this feature:

BLAST of Sed0011484 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018318.1	3.4e-179	98.67	Protein transport protein SEC13-like B, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_023528381.1	3.4e-179	98.67	protein transport protein SEC13 homolog B [Cucurbita pepo subsp. pepo] >XP_02352...	[more]
XP_022980068.1	1.7e-178	98.34	protein transport protein SEC13 homolog B [Cucurbita maxima] >XP_022980069.1 pro...	[more]
XP_022955988.1	2.9e-178	98.34	protein transport protein SEC13 homolog B [Cucurbita moschata] >XP_022955989.1 p...	[more]
XP_016900431.1	9.3e-177	97.01	PREDICTED: protein transport protein SEC13 homolog B [Cucumis melo] >XP_01690043...	[more]

BLAST of Sed0011484 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64740	1.4e-159	84.77	Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC...	[more]
Q9SRI1	6.5e-157	82.78	Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC...	[more]
Q9D1M0	3.3e-92	53.18	Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3	[more]
Q5XFW8	3.3e-92	53.18	Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1	[more]
Q3ZCC9	2.1e-91	53.18	Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1	[more]

BLAST of Sed0011484 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IY63	8.2e-179	98.34	protein transport protein SEC13 homolog B OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1GWL3	1.4e-178	98.34	protein transport protein SEC13 homolog B OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A1S4DWT1	4.5e-177	97.01	protein transport protein SEC13 homolog B OS=Cucumis melo OX=3656 GN=LOC10348996...	[more]
A0A5D3CBF9	4.5e-177	97.01	Protein transport protein SEC13-like protein B OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0LDB9	5.9e-177	97.01	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G...	[more]

BLAST of Sed0011484 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30050.1	1.0e-160	84.77	transducin family protein / WD-40 repeat family protein	[more]
AT3G01340.1	4.6e-158	82.78	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G01340.2	4.6e-158	82.78	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G64350.1	5.7e-15	23.96	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G43770.1	2.0e-12	24.30	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 72..86 score: 35.77 coord: 178..192 score: 38.48 coord: 228..242 score: 32.33
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 44..85 e-value: 9.8E-7 score: 38.4 coord: 198..241 e-value: 7.4E-4 score: 28.8 coord: 2..39 e-value: 0.77 score: 17.7 coord: 138..191 e-value: 0.015 score: 24.5 coord: 91..132 e-value: 7.7E-5 score: 32.1 coord: 247..286 e-value: 0.046 score: 22.9
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 146..191 e-value: 0.028 score: 15.3 coord: 94..131 e-value: 0.025 score: 15.5 coord: 206..240 e-value: 0.062 score: 14.2 coord: 8..37 e-value: 0.008 score: 17.0 coord: 46..85 e-value: 4.9E-5 score: 24.0
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 51..85 score: 9.672996
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 205..242 score: 10.642123
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 2..301 e-value: 2.9E-98 score: 330.7
None	No IPR available	PANTHER	PTHR11024:SF16	PROTEIN TRANSPORT PROTEIN SEC13 HOMOLOG B-LIKE	coord: 1..300
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 205..242 score: 8.940149
IPR037363	Sec13/Seh1 family	PANTHER	PTHR11024	NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER	coord: 1..300
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 8..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011484.1	Sed0011484.1	mRNA
Sed0011484.2	Sed0011484.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090114	COPII-coated vesicle budding
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0030127	COPII vesicle coat
cellular_component	GO:0031080	nuclear pore outer ring
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005198	structural molecule activity