Sed0011444 (gene) Chayote v1

Overview


Name	Sed0011444
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DBD_Tnp_Mut domain-containing protein
Location	LG09: 24937214 .. 24939798 (+)
RNA-Seq Expression	Sed0011444
Synteny	Sed0011444

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCATAAAGTTTAATTTATTAAATTTACTAATTAATATATTAGATATATTAATATTAATGAGTAAAAATTAATTTATTTGATAAATTAGTCATAAATAATTTTGAATAATAATTTAATTAAGGTCACAGTAATTAATATGTTGTATATGTAATTGGGTTAATAGTTATTGAATATATAAAGTAGAGAATTAATATATTAGATATATTAATTAGACATTTATTTATTTATAGTATATTGGATAGATTATAGAATTTGAATTTATTGGATAAATATCAATTAAAGTAAATAAAACAATTTTTAAAATTTTTGAAAATCAAATGAGAAAAATGCATAACTTTGATTTGTCGCACAGGAAAATTCTAAGTTGGAACAACCATTCCTCTACTATAAATAGGAGGTCTTAGAGGTCTTCATTCTCATCATTCATTGAGAGTAACGTTTCTTAAAAAGTTGACACACTTCTCTAAAAACTAAGATCTCTTTTCAAGTATTGTTTTTTAATAAAATGTCAATCCCTAGAATACGACATATAGATTAATTAAATTAATAAAAAATAATTAATTAGATTAATTATTTTTATTATTCGCATGCTTCTGTCGTGCTAAATGTATATAAATTATATCATAAAAAATTTTAAAACAAAAAATTTTGAAAAAAAAAATTATATTGAAATTTTGGAAAAAAATAAAAATAAACTTAAAAAAATAATGTTTGAAAAAAGCATATGAAAATTTGAAAAAATAATTGAAACTGAAAATTTTCAATACTGAAATTTTTTTTTTATAAAATTAAATGGAAATTAAAAAAAACAAATACATAAATTATAATAGCATCAGAAAACATGAATAACGCTTGTAAAGCACTAAAAAAACAAAGAGCGAATCTTTCGCTCAAAACCAGCCAGGGCATTTTTCCATTTAAGGTGCCTTATTATTCTATGTGAACAGATGCTCATAACTTATATTAAAGGGAAATTTGCAGTGTATAGCACTTTTTTACTCATGGATTACAATTATAGCATTTTTTAAAAAAAATTGCGTCCATAGCACATTCTGCCTTTATTTTTTAAAAATTCCTATTTTACCCTTTTTTTTAATTGTCGATCTCGTCTTCATTCTTTGTCTTTCTTCGTCGTCTTCGTCTTCACTTGGTCTTCGTCTTGGCTTCACCAGCTTCGTCGTCTTCGTCTTCTCTTCGCTTCTCTGTTTCGTGCTTTGTTGCATCGACATCATTCTCTTCGTTTCTTAGATTGACGTCTTCTTCCTTCTTCGTTTCTATCTTCGAGGTCTTCTTCCTTCTCCTATTTCGTTCCTGAATCCATCAAGATCAGCTTAGGACTAGTTTATAGGTAACAAATTCCTTTTGATTTCAACCTTTTTTTTTATTTTTCGGCAGCAAAACCTAGTTATTGTATTTGTATTTGATTTATATTTGTTACAAATGATTCAATTTTATCACTGTGTTATGTAGTTTATATTGAATATCTGTTTGATTGATATCTATCGGACTGATATCTTCGAGGTCTTCTTGCTTCTCCTATTTCGTTTCTCAATCCATCAAATCAACCAAGGATTAGGTTACAGGTAACAAATTCCTTTTGATTTCAATCCTTTTTTCATTTACTGGTAGTAAAACCTAGTTATTATATTTGAATTTGATTCATATTAGTTACAAATTATTGAATTCTATCACTAAGTTATGTAGTTTATATTGAATATCTGTTTGATTTATATCTATCGGTTCAACCGATGCAATCTGTTTAGTAATAGAAGTCAATCAATATTTTTTTTATGTCTATTTGATTGATATCTATCAGTCTGATATCTATCTGTTTGATTGATATCTATCACAATGACTTCTATCATTCCTTTTTTTATCTTTATTATTCAATTAAGTCAAACAGTTATTGTGATTGATATCTATCATCTTTTCTAAGAACATTCAGTCAATAATTTTTCATATATATCTTTTATTTATCTATAATGTGACACTTATGTACCTTGTTTTCTTTTTCAGATTTGACAATATGGTTAAGCTACCAATAGTTGTCTTTCATTGTGGTCAATGGAATGAATCTGGTTCTTATGAGAATTACAAGACTAGTGGGGTTTTGGTTGATGAAGTAATGAATTTTGAGGATTTTGGGACGTTGATTCTTAAAGAGTTGAAATTAGATGCACCTAGATCTTCTTTATGCTTATCTATCTTATTGGATTATGGTCAAAGTTCTCATCCTTTTCATATTTTGGAGGATAAGGATGTAGATTGGTACCTAACTTTAGTAAAGGAGAATAGCCCAAGACATCCATTAGTGGCTGATATTAAGGATTTTCGTTTAGAGAGGACATCTAATAGTGTTGTTAGCAATACAAATTTGTTGGTGTATTCCTCAACAGTAGATGAAGATAATGATGTTACTACTTTCAATGTCATTAAAGATATTCAATTTGATTGTGTTTTCAACATAAAGGATGTATTTGCTAGTAAGGAAGTGTTGTGTAATTGTTTCAAATACATGGCTGTGAAAAGTAATTTTGACTATAAGACTCCTAGATCTAGCAATAAAGCAGTTGAGTTTTAG

mRNA sequence

ATGAGCATAAAGTTTAATTTATTAAATTTACTAATTAATATATTAGATATATTAATATTAATGATAAATAAAACAATTTTTAAAATTTTTGAAAATCAAATGAGAAAAATGCATAACTTTGATTTGTCGCACAGGAAAATTCTAAGTTGGAACAACCATTCCTCTACTATAAATAGGAGATTTGACAATATGGTTAAGCTACCAATAGTTGTCTTTCATTGTGGTCAATGGAATGAATCTGGTTCTTATGAGAATTACAAGACTAGTGGGGTTTTGGTTGATGAAGTAATGAATTTTGAGGATTTTGGGACGTTGATTCTTAAAGAGTTGAAATTAGATGCACCTAGATCTTCTTTATGCTTATCTATCTTATTGGATTATGGTCAAAGTTCTCATCCTTTTCATATTTTGGAGGATAAGGATGTAGATTGGTACCTAACTTTAGTAAAGGAGAATAGCCCAAGACATCCATTAGTGGCTGATATTAAGGATTTTCGTTTAGAGAGGACATCTAATAGTGTTGTTAGCAATACAAATTTGTTGGTGTATTCCTCAACAGTAGATGAAGATAATGATGTTACTACTTTCAATGTCATTAAAGATATTCAATTTGATTGTGTTTTCAACATAAAGGATGTATTTGCTAGTAAGGAAGTGTTGTGTAATTGTTTCAAATACATGGCTGTGAAAAGTAATTTTGACTATAAGACTCCTAGATCTAGCAATAAAGCAGTTGAGTTTTAG

Coding sequence (CDS)

ATGAGCATAAAGTTTAATTTATTAAATTTACTAATTAATATATTAGATATATTAATATTAATGATAAATAAAACAATTTTTAAAATTTTTGAAAATCAAATGAGAAAAATGCATAACTTTGATTTGTCGCACAGGAAAATTCTAAGTTGGAACAACCATTCCTCTACTATAAATAGGAGATTTGACAATATGGTTAAGCTACCAATAGTTGTCTTTCATTGTGGTCAATGGAATGAATCTGGTTCTTATGAGAATTACAAGACTAGTGGGGTTTTGGTTGATGAAGTAATGAATTTTGAGGATTTTGGGACGTTGATTCTTAAAGAGTTGAAATTAGATGCACCTAGATCTTCTTTATGCTTATCTATCTTATTGGATTATGGTCAAAGTTCTCATCCTTTTCATATTTTGGAGGATAAGGATGTAGATTGGTACCTAACTTTAGTAAAGGAGAATAGCCCAAGACATCCATTAGTGGCTGATATTAAGGATTTTCGTTTAGAGAGGACATCTAATAGTGTTGTTAGCAATACAAATTTGTTGGTGTATTCCTCAACAGTAGATGAAGATAATGATGTTACTACTTTCAATGTCATTAAAGATATTCAATTTGATTGTGTTTTCAACATAAAGGATGTATTTGCTAGTAAGGAAGTGTTGTGTAATTGTTTCAAATACATGGCTGTGAAAAGTAATTTTGACTATAAGACTCCTAGATCTAGCAATAAAGCAGTTGAGTTTTAG

Protein sequence

MSIKFNLLNLLINILDILILMINKTIFKIFENQMRKMHNFDLSHRKILSWNNHSSTINRRFDNMVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSSHPFHILEDKDVDWYLTLVKENSPRHPLVADIKDFRLERTSNSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF

Homology

[Close]

BLAST of Sed0011444 vs. NCBI nr
Match: TYK23827.1 (MuDR family transposase [Cucumis melo var. makuwa])

HSP 1 Score: 172.2 bits (435), Expect = 5.7e-39
Identity = 94/192 (48.96%), Postives = 132/192 (68.75%), Query Frame = 0


Query: 64  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSI 123
           M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+FG+LIL+E++ DA  SS+ LSI
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFGSLILREVRFDASPSSIQLSI 60

Query: 124 LLDYG--QSSHPFHILEDKDVDWYLTLVKENSPRHPLVA----DIKDFRLERTS--NSVV 183
           LLDYG         I EDKDV W+L+LVK    RHPLVA     + +  LE +S  +S +
Sbjct: 61  LLDYGITDIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIVHVSNMDLEWSSVVDSGM 120

Query: 184 SNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDY 243
            N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++
Sbjct: 121 DNLCSLLSSSSIDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEF 180

Query: 244 KTPRSSNKAVEF 248
           KT RS++K++EF
Sbjct: 181 KTVRSNSKSIEF 192

[Close]

BLAST of Sed0011444 vs. NCBI nr
Match: XP_038907134.1 (uncharacterized protein LOC120092945 [Benincasa hispida])

HSP 1 Score: 169.5 bits (428), Expect = 3.7e-38
Identity = 96/187 (51.34%), Postives = 126/187 (67.38%), Query Frame = 0


Query: 67  LPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLD 126
           +PIVVFH G WNE   Y NYKT+GVLVD++M FEDF  LI+KE++LDA  SS+ LS LLD
Sbjct: 3   IPIVVFHGGIWNEK-RYVNYKTAGVLVDDIMGFEDFVGLIVKEIRLDASISSIELSTLLD 62

Query: 127 YGQS--SHPFHILEDKDVDWYLTLVKENSPRHPLVADIKDFRLERTSNSVVSNT----NL 186
           +G +   +   I EDKDV W+LTLVKE S RHPLVA +    LE +S+ V S      ++
Sbjct: 63  FGMNKVQNIVEIHEDKDVAWFLTLVKEQSTRHPLVAHVTSMCLEGSSSVVSSEAENYLSI 122

Query: 187 LVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRS 246
           + YS  + +D+    F VI DI        KDVFASKE+L  CF Y+AVK NF++KT RS
Sbjct: 123 VPYSMPMIDDD----FQVIMDIHIARDLKEKDVFASKEILSKCFYYIAVKKNFEFKTLRS 182

Query: 247 SNKAVEF 248
           +++++EF
Sbjct: 183 NSRSIEF 184

[Close]

BLAST of Sed0011444 vs. NCBI nr
Match: KAA0031318.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0034560.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0035330.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0037559.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0038032.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 168.7 bits (426), Expect = 6.3e-38
Identity = 94/192 (48.96%), Postives = 132/192 (68.75%), Query Frame = 0


Query: 64  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSI 123
           M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSI
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 124 LLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV----ADIKDFRLERTS--NSVV 183
           LLDYG ++      I EDKDV W+L+LVK    RHPLV    A + D  LE +S  +S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 184 SNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDY 243
            N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++
Sbjct: 121 DNLCSLLPSSSIDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEF 180

Query: 244 KTPRSSNKAVEF 248
           KT RS++K++EF
Sbjct: 181 KTVRSNSKSIEF 192

[Close]

BLAST of Sed0011444 vs. NCBI nr
Match: TYK09469.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK14307.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK15164.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK16240.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK20570.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 168.7 bits (426), Expect = 6.3e-38
Identity = 94/192 (48.96%), Postives = 132/192 (68.75%), Query Frame = 0


Query: 64  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSI 123
           M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSI
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 124 LLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV----ADIKDFRLERTS--NSVV 183
           LLDYG ++      I EDKDV W+L+LVK    RHPLV    A + D  LE +S  +S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 184 SNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDY 243
            N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++
Sbjct: 121 DNLCSLLPSSSIDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEF 180

Query: 244 KTPRSSNKAVEF 248
           KT RS++K++EF
Sbjct: 181 KTVRSNSKSIEF 192

[Close]

BLAST of Sed0011444 vs. NCBI nr
Match: TYJ98376.1 (uncharacterized protein E5676_scaffold232G001130 [Cucumis melo var. makuwa])

HSP 1 Score: 168.7 bits (426), Expect = 6.3e-38
Identity = 94/192 (48.96%), Postives = 132/192 (68.75%), Query Frame = 0


Query: 64  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSI 123
           M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSI
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 124 LLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV----ADIKDFRLERTS--NSVV 183
           LLDYG ++      I EDKDV W+L+LVK    RHPLV    A + D  LE +S  +S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 184 SNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDY 243
            N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++
Sbjct: 121 DNLCSLLPSSSIDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEF 180

Query: 244 KTPRSSNKAVEF 248
           KT RS++K++EF
Sbjct: 181 KTVRSNSKSIEF 192

[Close]

BLAST of Sed0011444 vs. ExPASy TrEMBL
Match: A0A5D3DJR8 (MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold162G00300 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 2.8e-39
Identity = 94/192 (48.96%), Postives = 132/192 (68.75%), Query Frame = 0


Query: 64  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSI 123
           M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+FG+LIL+E++ DA  SS+ LSI
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFGSLILREVRFDASPSSIQLSI 60

Query: 124 LLDYG--QSSHPFHILEDKDVDWYLTLVKENSPRHPLVA----DIKDFRLERTS--NSVV 183
           LLDYG         I EDKDV W+L+LVK    RHPLVA     + +  LE +S  +S +
Sbjct: 61  LLDYGITDIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIVHVSNMDLEWSSVVDSGM 120

Query: 184 SNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDY 243
            N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++
Sbjct: 121 DNLCSLLSSSSIDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEF 180

Query: 244 KTPRSSNKAVEF 248
           KT RS++K++EF
Sbjct: 181 KTVRSNSKSIEF 192

[Close]

BLAST of Sed0011444 vs. ExPASy TrEMBL
Match: A0A5A7T3G5 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00710 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 3.1e-38
Identity = 94/192 (48.96%), Postives = 132/192 (68.75%), Query Frame = 0


Query: 64  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSI 123
           M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSI
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 124 LLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV----ADIKDFRLERTS--NSVV 183
           LLDYG ++      I EDKDV W+L+LVK    RHPLV    A + D  LE +S  +S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 184 SNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDY 243
            N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++
Sbjct: 121 DNLCSLLPSSSIDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEF 180

Query: 244 KTPRSSNKAVEF 248
           KT RS++K++EF
Sbjct: 181 KTVRSNSKSIEF 192

[Close]

BLAST of Sed0011444 vs. ExPASy TrEMBL
Match: A0A5D3DAW8 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001090 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 3.1e-38
Identity = 94/192 (48.96%), Postives = 132/192 (68.75%), Query Frame = 0


Query: 64  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSI 123
           M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSI
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 124 LLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV----ADIKDFRLERTS--NSVV 183
           LLDYG ++      I EDKDV W+L+LVK    RHPLV    A + D  LE +S  +S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 184 SNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDY 243
            N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++
Sbjct: 121 DNLCSLLPSSSIDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEF 180

Query: 244 KTPRSSNKAVEF 248
           KT RS++K++EF
Sbjct: 181 KTVRSNSKSIEF 192

[Close]

BLAST of Sed0011444 vs. ExPASy TrEMBL
Match: A0A5D3C8T8 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1081G00080 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 3.1e-38
Identity = 94/192 (48.96%), Postives = 132/192 (68.75%), Query Frame = 0


Query: 64  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSI 123
           M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSI
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 124 LLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV----ADIKDFRLERTS--NSVV 183
           LLDYG ++      I EDKDV W+L+LVK    RHPLV    A + D  LE +S  +S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 184 SNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDY 243
            N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++
Sbjct: 121 DNLCSLLPSSSIDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEF 180

Query: 244 KTPRSSNKAVEF 248
           KT RS++K++EF
Sbjct: 181 KTVRSNSKSIEF 192

[Close]

BLAST of Sed0011444 vs. ExPASy TrEMBL
Match: A0A5D3BH55 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G001130 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 3.1e-38
Identity = 94/192 (48.96%), Postives = 132/192 (68.75%), Query Frame = 0


Query: 64  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSI 123
           M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSI
Sbjct: 1   MIKLPIVVFHSGQWDDTNSYLNYKTTGVLVDEMMSFENFVSLILREVLFDASPSSIQLSI 60

Query: 124 LLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV----ADIKDFRLERTS--NSVV 183
           LLDYG ++      I EDKDV W+L+LVK    RHPLV    A + D  LE +S  +S +
Sbjct: 61  LLDYGITNIQTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSVVDSGM 120

Query: 184 SNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDY 243
            N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++
Sbjct: 121 DNLCSLLPSSSIDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEF 180

Query: 244 KTPRSSNKAVEF 248
           KT RS++K++EF
Sbjct: 181 KTVRSNSKSIEF 192

The following BLAST results are available for this feature:

BLAST of Sed0011444 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK23827.1	5.7e-39	48.96	MuDR family transposase [Cucumis melo var. makuwa]	[more]
XP_038907134.1	3.7e-38	51.34	uncharacterized protein LOC120092945 [Benincasa hispida]	[more]
KAA0031318.1	6.3e-38	48.96	protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >KAA0034560.1 pr...	[more]
TYK09469.1	6.3e-38	48.96	protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK14307.1 prot...	[more]
TYJ98376.1	6.3e-38	48.96	uncharacterized protein E5676_scaffold232G001130 [Cucumis melo var. makuwa]	[more]

BLAST of Sed0011444 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0011444 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DJR8	2.8e-39	48.96	MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T3G5	3.1e-38	48.96	Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3DAW8	3.1e-38	48.96	Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3C8T8	3.1e-38	48.96	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5D3BH55	3.1e-38	48.96	DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Sed0011444 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011444.1	Sed0011444.1	mRNA