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Sed0011012 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCCATTTTCTTTCTCTCTCTAAAACCCCCTCTTCAATTCTCACCTTCACCGACGCCATTGTTGTCTGCAATGTCCTCCTATGGCTTCACTGAAACCTCCATTTTTTCCCGCGCCAGATCCGCCTCCGATTCCGTCTACGCCACTTTCCGGCCATGGCGGGAGTTTCTCCAGCCGCTCTCCTCCTTCACCCGCCCTTCATCCCTCTCCGAAGCCACCGTCCGCTGTAAGCGCAATCTCAACCACTTCCGTGTCAATTACACTTTCATCGTCTTGCTCCTTCTCTTTCTCAGCCTCCTCTGGCAGCCCGTCTCCTTGATTGTGTTCTTGATCGTCTTCGTCGCCTGGTTCTTCCTCTACTTTTTCCGGGATCAGCCGCTCGAGGTGTTTCATCGTACTGTTGATGATCGAGTCGTCTTGGCTGTGCTTGGATTTCTCACGGTTGTCGCCTTGGTGTTGACGGATGTGTCGTTGAATGTTGTGGTTTCGATTTTGATTGGGGGTTTTCTTGTTTTGTTACATGCGGGTTTTAGGGTTACGGAGGATTTGTATATTGACGAACAGGAAGTCGCCGATGGAGGGTTGCTTTCTGTTGTCGGTAGTCCGGATTGGAAAGGGTACAGCCCAGTTTAGAGAAATCGCTGCTTCGTTTTTGCTAGGCTGTGAAAGATCCAAGTTCTTCGTGATTTCAAATGGCGATTGATCTTGTTGCTCGATTCGATTTTCGAATGAGCTTAAGAAACCAAGCTTCTATCTACTTGGAAATCCGGATTTGCTACCCCACTCAATTGATTTAGCGAGGATTTTTTTGTATGTCCCTTTCGTTTCAGGGCTCTGCCTCTTATTTGTTCTAAATGTTTGTACATGTAGTTTTAGTTTACAGTAGCGATTTACAGAGATTTGCTAGGTTTAATCCTAGATTTTATCCCGACATTGCTTTTATTTGGGTGTGATTTTCAAGGAAGGGGGTTGGTTTGTTCTTTATTTATGATAGGAAGAAATGAGAAAGGGTGGATTTTGATTTGGATTTCAGTGTCTTATTAATGTATACTATCTCTTCCATTTCATGTTGTTTCTGTTGTTCTTTCTCTTCATCATGTTGGAAAACTTTTGACCATACTTGTAGATTCGTATTATCTATAATGGCAGATTATGTTGAC ATCCATTTTCTTTCTCTCTCTAAAACCCCCTCTTCAATTCTCACCTTCACCGACGCCATTGTTGTCTGCAATGTCCTCCTATGGCTTCACTGAAACCTCCATTTTTTCCCGCGCCAGATCCGCCTCCGATTCCGTCTACGCCACTTTCCGGCCATGGCGGGAGTTTCTCCAGCCGCTCTCCTCCTTCACCCGCCCTTCATCCCTCTCCGAAGCCACCGTCCGCTGTAAGCGCAATCTCAACCACTTCCGTGTCAATTACACTTTCATCGTCTTGCTCCTTCTCTTTCTCAGCCTCCTCTGGCAGCCCGTCTCCTTGATTGTGTTCTTGATCGTCTTCGTCGCCTGGTTCTTCCTCTACTTTTTCCGGGATCAGCCGCTCGAGGTGTTTCATCGTACTGTTGATGATCGAGTCGTCTTGGCTGTGCTTGGATTTCTCACGGTTGTCGCCTTGGTGTTGACGGATGTGTCGTTGAATGTTGTGGTTTCGATTTTGATTGGGGGTTTTCTTGTTTTGTTACATGCGGGTTTTAGGGTTACGGAGGATTTGTATATTGACGAACAGGAAGTCGCCGATGGAGGGTTGCTTTCTGTTGTCGGTAGTCCGGATTGGAAAGGGTACAGCCCAGTTTAGAGAAATCGCTGCTTCGTTTTTGCTAGGCTGTGAAAGATCCAAGTTCTTCGTGATTTCAAATGGCGATTGATCTTGTTGCTCGATTCGATTTTCGAATGAGCTTAAGAAACCAAGCTTCTATCTACTTGGAAATCCGGATTTGCTACCCCACTCAATTGATTTAGCGAGGATTTTTTTGTATGTCCCTTTCGTTTCAGGGCTCTGCCTCTTATTTGTTCTAAATGTTTGTACATGTAGTTTTAGTTTACAGTAGCGATTTACAGAGATTTGCTAGGTTTAATCCTAGATTTTATCCCGACATTGCTTTTATTTGGGTGTGATTTTCAAGGAAGGGGGTTGGTTTGTTCTTTATTTATGATAGGAAGAAATGAGAAAGGGTGGATTTTGATTTGGATTTCAGTGTCTTATTAATGTATACTATCTCTTCCATTTCATGTTGTTTCTGTTGTTCTTTCTCTTCATCATGTTGGAAAACTTTTGACCATACTTGTAGATTCGTATTATCTATAATGGCAGATTATGTTGAC ATGTCCTCCTATGGCTTCACTGAAACCTCCATTTTTTCCCGCGCCAGATCCGCCTCCGATTCCGTCTACGCCACTTTCCGGCCATGGCGGGAGTTTCTCCAGCCGCTCTCCTCCTTCACCCGCCCTTCATCCCTCTCCGAAGCCACCGTCCGCTGTAAGCGCAATCTCAACCACTTCCGTGTCAATTACACTTTCATCGTCTTGCTCCTTCTCTTTCTCAGCCTCCTCTGGCAGCCCGTCTCCTTGATTGTGTTCTTGATCGTCTTCGTCGCCTGGTTCTTCCTCTACTTTTTCCGGGATCAGCCGCTCGAGGTGTTTCATCGTACTGTTGATGATCGAGTCGTCTTGGCTGTGCTTGGATTTCTCACGGTTGTCGCCTTGGTGTTGACGGATGTGTCGTTGAATGTTGTGGTTTCGATTTTGATTGGGGGTTTTCTTGTTTTGTTACATGCGGGTTTTAGGGTTACGGAGGATTTGTATATTGACGAACAGGAAGTCGCCGATGGAGGGTTGCTTTCTGTTGTCGGTAGTCCGGATTGGAAAGGGTACAGCCCAGTTTAG MSSYGFTETSIFSRARSASDSVYATFRPWREFLQPLSSFTRPSSLSEATVRCKRNLNHFRVNYTFIVLLLLFLSLLWQPVSLIVFLIVFVAWFFLYFFRDQPLEVFHRTVDDRVVLAVLGFLTVVALVLTDVSLNVVVSILIGGFLVLLHAGFRVTEDLYIDEQEVADGGLLSVVGSPDWKGYSPV Homology
BLAST of Sed0011012 vs. NCBI nr
Match: XP_038887336.1 (PRA1 family protein E-like [Benincasa hispida]) HSP 1 Score: 291.6 bits (745), Expect = 4.9e-75 Identity = 154/185 (83.24%), Postives = 168/185 (90.81%), Query Frame = 0
BLAST of Sed0011012 vs. NCBI nr
Match: XP_004145378.1 (PRA1 family protein E [Cucumis sativus] >KGN61689.1 hypothetical protein Csa_006382 [Cucumis sativus]) HSP 1 Score: 286.6 bits (732), Expect = 1.6e-73 Identity = 151/185 (81.62%), Postives = 166/185 (89.73%), Query Frame = 0
BLAST of Sed0011012 vs. NCBI nr
Match: XP_008449347.1 (PREDICTED: PRA1 family protein E-like [Cucumis melo] >KAA0057422.1 PRA1 family protein E-like [Cucumis melo var. makuwa] >TYK30121.1 PRA1 family protein E-like [Cucumis melo var. makuwa]) HSP 1 Score: 282.3 bits (721), Expect = 2.9e-72 Identity = 149/183 (81.42%), Postives = 165/183 (90.16%), Query Frame = 0
BLAST of Sed0011012 vs. NCBI nr
Match: XP_023533638.1 (PRA1 family protein E-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271.9 bits (694), Expect = 4.0e-69 Identity = 147/185 (79.46%), Postives = 158/185 (85.41%), Query Frame = 0
BLAST of Sed0011012 vs. NCBI nr
Match: XP_022145895.1 (PRA1 family protein E-like [Momordica charantia]) HSP 1 Score: 270.8 bits (691), Expect = 8.9e-69 Identity = 145/183 (79.23%), Postives = 160/183 (87.43%), Query Frame = 0
BLAST of Sed0011012 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.9e-29 Identity = 74/180 (41.11%), Postives = 114/180 (63.33%), Query Frame = 0
BLAST of Sed0011012 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 6.0e-28 Identity = 75/174 (43.10%), Postives = 107/174 (61.49%), Query Frame = 0
BLAST of Sed0011012 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.5e-26 Identity = 80/166 (48.19%), Postives = 104/166 (62.65%), Query Frame = 0
BLAST of Sed0011012 vs. ExPASy Swiss-Prot
Match: Q9FZ63 (PRA1 family protein F1 OS=Arabidopsis thaliana OX=3702 GN=PRA1F1 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.3e-26 Identity = 66/144 (45.83%), Postives = 91/144 (63.19%), Query Frame = 0
BLAST of Sed0011012 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25 Identity = 82/190 (43.16%), Postives = 106/190 (55.79%), Query Frame = 0
BLAST of Sed0011012 vs. ExPASy TrEMBL
Match: A0A0A0LKV0 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G224290 PE=3 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 7.6e-74 Identity = 151/185 (81.62%), Postives = 166/185 (89.73%), Query Frame = 0
BLAST of Sed0011012 vs. ExPASy TrEMBL
Match: A0A5A7UNI5 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001030 PE=3 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.4e-72 Identity = 149/183 (81.42%), Postives = 165/183 (90.16%), Query Frame = 0
BLAST of Sed0011012 vs. ExPASy TrEMBL
Match: A0A1S3BMR2 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103491252 PE=3 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.4e-72 Identity = 149/183 (81.42%), Postives = 165/183 (90.16%), Query Frame = 0
BLAST of Sed0011012 vs. ExPASy TrEMBL
Match: A0A6J1CVS9 (PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111015242 PE=3 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 4.3e-69 Identity = 145/183 (79.23%), Postives = 160/183 (87.43%), Query Frame = 0
BLAST of Sed0011012 vs. ExPASy TrEMBL
Match: A0A6J1EWX4 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111437276 PE=3 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 9.6e-69 Identity = 146/185 (78.92%), Postives = 157/185 (84.86%), Query Frame = 0
BLAST of Sed0011012 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E ) HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30 Identity = 74/180 (41.11%), Postives = 114/180 (63.33%), Query Frame = 0
BLAST of Sed0011012 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein ) HSP 1 Score: 125.6 bits (314), Expect = 4.3e-29 Identity = 75/174 (43.10%), Postives = 107/174 (61.49%), Query Frame = 0
BLAST of Sed0011012 vs. TAIR 10
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3 ) HSP 1 Score: 120.2 bits (300), Expect = 1.8e-27 Identity = 80/166 (48.19%), Postives = 104/166 (62.65%), Query Frame = 0
BLAST of Sed0011012 vs. TAIR 10
Match: AT1G17700.1 (prenylated RAB acceptor 1.F1 ) HSP 1 Score: 119.8 bits (299), Expect = 2.4e-27 Identity = 66/144 (45.83%), Postives = 91/144 (63.19%), Query Frame = 0
BLAST of Sed0011012 vs. TAIR 10
Match: AT1G04260.1 (CAMV movement protein interacting protein 7 ) HSP 1 Score: 117.9 bits (294), Expect = 9.0e-27 Identity = 66/166 (39.76%), Postives = 109/166 (65.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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