Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTGGCAGAGCTGAAGAGAGAATTTGACGATTGGAAGGGTGTCGGCGAACAGCAAGAGACGAGAGTGCGTTACCACGAGACGAGAGCCCACAACATAGCCATGGCTTATCTTATATGGGAGAGGGTTTTTGCTTTAGGTATGCATCATTTTTACATTCCTAATTCCCACCTTATTTGCTCCCATTGGTGGACTCTTTTTGGTTTTAGCCTTTCCTCCACTGCTCTCTACTTTTTGTTTTTCGTAGAGGCTGCCATCATGTGGTATCAAGCTCGCAGTCACCTGGATATCATCTCCCAAAAGATCATCACCATTTTGATTAAAATTAATGCCACAAATGACCATTTTTCTGTTTCAAGTAGTTTTCACATGCACCAACTTCAGTACGACCGGCCTTTTGCTGCAATTGTGCTGAGGAAACTTTACTTTCTCTCCGTTCTCTCCGCTCTCCTCGCCGCGACTGCTTTTCAGCTTTATATGTCTTACTATTCTCTGTGCAACTGA
mRNA sequence
ATGGAATTGGCAGAGCTGAAGAGAGAATTTGACGATTGGAAGGGTGTCGGCGAACAGCAAGAGACGAGAGTGCGTTACCACGAGACGAGAGCCCACAACATAGCCATGGCTTATCTTATATGGGAGAGGGTTTTTGCTTTAGGTATGCATCATTTTTACATTCCTAATTCCCACCTTATTTGCTCCCATTGGTGGACTCTTTTTGGTTTTAGCCTTTCCTCCACTGCTCTCTACTTTTTGTTTTTCGTAGAGGCTGCCATCATGTGGTATCAAGCTCGCAGTCACCTGGATATCATCTCCCAAAAGATCATCACCATTTTGATTAAAATTAATGCCACAAATGACCATTTTTCTGTTTCAAGTAGTTTTCACATGCACCAACTTCAGTACGACCGGCCTTTTGCTGCAATTGTGCTGAGGAAACTTTACTTTCTCTCCGTTCTCTCCGCTCTCCTCGCCGCGACTGCTTTTCAGCTTTATATGTCTTACTATTCTCTGTGCAACTGA
Coding sequence (CDS)
ATGGAATTGGCAGAGCTGAAGAGAGAATTTGACGATTGGAAGGGTGTCGGCGAACAGCAAGAGACGAGAGTGCGTTACCACGAGACGAGAGCCCACAACATAGCCATGGCTTATCTTATATGGGAGAGGGTTTTTGCTTTAGGTATGCATCATTTTTACATTCCTAATTCCCACCTTATTTGCTCCCATTGGTGGACTCTTTTTGGTTTTAGCCTTTCCTCCACTGCTCTCTACTTTTTGTTTTTCGTAGAGGCTGCCATCATGTGGTATCAAGCTCGCAGTCACCTGGATATCATCTCCCAAAAGATCATCACCATTTTGATTAAAATTAATGCCACAAATGACCATTTTTCTGTTTCAAGTAGTTTTCACATGCACCAACTTCAGTACGACCGGCCTTTTGCTGCAATTGTGCTGAGGAAACTTTACTTTCTCTCCGTTCTCTCCGCTCTCCTCGCCGCGACTGCTTTTCAGCTTTATATGTCTTACTATTCTCTGTGCAACTGA
Protein sequence
MELAELKREFDDWKGVGEQQETRVRYHETRAHNIAMAYLIWERVFALGMHHFYIPNSHLICSHWWTLFGFSLSSTALYFLFFVEAAIMWYQARSHLDIISQKIITILIKINATNDHFSVSSSFHMHQLQYDRPFAAIVLRKLYFLSVLSALLAATAFQLYMSYYSLCN
Homology
BLAST of Sed0010999 vs. NCBI nr
Match:
ADN33782.1 (hypothetical protein [Cucumis melo subsp. melo])
HSP 1 Score: 133.7 bits (335), Expect = 1.5e-27
Identity = 84/182 (46.15%), Postives = 114/182 (62.64%), Query Frame = 0
Query: 1 MELAELKREFDDWKGVGEQQETRVRYHETRAHNIAMAYLIWERVFALGMHHFYIPNSHLI 60
MEL ELKR FD K + E+QE RVRY+ETRA N+A+A LIW+R+F +GM+H S L
Sbjct: 3 MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 CS-HWWTLFGFSLSSTALYFLFFVEAAIMWYQARSHLDIISQKIITILIKINAT------ 120
C+ H W + GFSL+ST+LY LFF+EA M Y+A++ LDIIS+K I I ++I T
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPNDD 122
Query: 121 -------NDHFSVSSSFHMHQLQYDRPFAAIVLRKLYFLSVLSALLAATAFQLYMSYYSL 169
+D+ + SF + LQY +V RK+Y S +S LLA +AF++Y L
Sbjct: 123 EAGDTFSSDNGGLELSFQVQLLQYHP--LTVVQRKIYIASTISTLLAVSAFEVYTCKLLL 182
BLAST of Sed0010999 vs. NCBI nr
Match:
KAA0042580.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05984.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 128.3 bits (321), Expect = 6.4e-26
Identity = 81/182 (44.51%), Postives = 112/182 (61.54%), Query Frame = 0
Query: 1 MELAELKREFDDWKGVGEQQETRVRYHETRAHNIAMAYLIWERVFALGMHHFYIPNSHLI 60
M+L LKR FD K + E+QE RVRY+ETRA N+A+A LIW+R+F +GM+H S L
Sbjct: 3 MDLGVLKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 CS-HWWTLFGFSLSSTALYFLFFVEAAIMWYQARSHLDIISQKIITILIKINAT------ 120
C+ H W + GFSL+ST+LY LFF+EA M Y+A++ LDIIS++ I I ++I T
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKRQIEISLQILNTGSPNDD 122
Query: 121 -------NDHFSVSSSFHMHQLQYDRPFAAIVLRKLYFLSVLSALLAATAFQLYMSYYSL 169
+D+ + SF + LQY +V RK+Y S +S LLA AF++Y L
Sbjct: 123 EAGDTFSSDNGGLELSFQVQLLQYHP--LTVVQRKIYIASTISTLLAVAAFEVYTCKLLL 182
BLAST of Sed0010999 vs. NCBI nr
Match:
KAA0042578.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05982.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 122.5 bits (306), Expect = 3.5e-24
Identity = 82/183 (44.81%), Postives = 109/183 (59.56%), Query Frame = 0
Query: 1 MELAELKREFDDWKGVGEQQETRVRYHETRAHNIAMAYLIWERVFALGMHHFYIPNSHLI 60
M ELKR+FD K + E+QE RVRY+ETRA N+ +A LIW R+F +GM+H S L
Sbjct: 3 MRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWYRLFVVGMYHISSSLSLLN 62
Query: 61 CS-HWWTLFGFSLSSTALYFLFFVEAAIMWYQARSHLDII--SQKIITILIKINATNDHF 120
C+ H W + GFSL+ST+LY LFF+EA M Y+A++ LDII Q I+ I D +
Sbjct: 63 CTHHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIIYKQQNEISQQILNTGNPDDY 122
Query: 121 ----SVSS-------SFHMHQL-QYDRPFAAIVLRKLYFLSVLSALLAATAFQLYMSYYS 169
S+SS SF + L +Y RP +V RK+Y S +S LLA AF++Y
Sbjct: 123 EGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKVYIASTISTLLAVAAFEVYTCKLL 182
BLAST of Sed0010999 vs. NCBI nr
Match:
XP_008437551.1 (PREDICTED: uncharacterized protein LOC103482931 [Cucumis melo])
HSP 1 Score: 114.0 bits (284), Expect = 1.3e-21
Identity = 62/111 (55.86%), Postives = 82/111 (73.87%), Query Frame = 0
Query: 1 MELAELKREFDDWKGVGEQQETRVRYHETRAHNIAMAYLIWERVFALGMHHFYIPNSHLI 60
MEL ELKR FD K + E+QE RVRY+ETRA N+A+A LIW+R+F +GM+H S L
Sbjct: 3 MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 CS-HWWTLFGFSLSSTALYFLFFVEAAIMWYQARSHLDIISQKIITILIKI 111
C+ H W + GFSL+ST+LY LFF+EA M Y+A++ LDIIS+K I I ++I
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQI 113
BLAST of Sed0010999 vs. NCBI nr
Match:
XP_011654636.1 (uncharacterized protein LOC105435427 [Cucumis sativus] >KAE8647813.1 hypothetical protein Csa_000251 [Cucumis sativus])
HSP 1 Score: 113.2 bits (282), Expect = 2.1e-21
Identity = 62/111 (55.86%), Postives = 82/111 (73.87%), Query Frame = 0
Query: 1 MELAELKREFDDWKGVGEQQETRVRYHETRAHNIAMAYLIWERVFALGMHHFYIPNSHLI 60
ME ELKR+FD K + E+QE RVRY+ETRA N+A+A LIW+R+F +GM+H S L
Sbjct: 3 MEFGELKRKFDGLKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSLLN 62
Query: 61 CS-HWWTLFGFSLSSTALYFLFFVEAAIMWYQARSHLDIISQKIITILIKI 111
C+ H W +F F LSST+LYFLFF+EA M Y+A++ LDIIS+K I I ++I
Sbjct: 63 CTHHLWMVFSFILSSTSLYFLFFLEAVFMLYRAQNQLDIISKKQIEISLQI 113
BLAST of Sed0010999 vs. ExPASy TrEMBL
Match:
E5GBE1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 133.7 bits (335), Expect = 7.4e-28
Identity = 84/182 (46.15%), Postives = 114/182 (62.64%), Query Frame = 0
Query: 1 MELAELKREFDDWKGVGEQQETRVRYHETRAHNIAMAYLIWERVFALGMHHFYIPNSHLI 60
MEL ELKR FD K + E+QE RVRY+ETRA N+A+A LIW+R+F +GM+H S L
Sbjct: 3 MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 CS-HWWTLFGFSLSSTALYFLFFVEAAIMWYQARSHLDIISQKIITILIKINAT------ 120
C+ H W + GFSL+ST+LY LFF+EA M Y+A++ LDIIS+K I I ++I T
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPNDD 122
Query: 121 -------NDHFSVSSSFHMHQLQYDRPFAAIVLRKLYFLSVLSALLAATAFQLYMSYYSL 169
+D+ + SF + LQY +V RK+Y S +S LLA +AF++Y L
Sbjct: 123 EAGDTFSSDNGGLELSFQVQLLQYHP--LTVVQRKIYIASTISTLLAVSAFEVYTCKLLL 182
BLAST of Sed0010999 vs. ExPASy TrEMBL
Match:
A0A0A0KM15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26
Identity = 84/182 (46.15%), Postives = 114/182 (62.64%), Query Frame = 0
Query: 1 MELAELKREFDDWKGVGEQQETRVRYHETRAHNIAMAYLIWERVFALGMHHFYIPNSHLI 60
ME ELKR+FD K + E+QE RVRY+ETRA N+A+A LIW+R+F +GM+H S L
Sbjct: 3 MEFGELKRKFDGLKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSLLN 62
Query: 61 CS-HWWTLFGFSLSSTALYFLFFVEAAIMWYQARSHLDIISQKIITILIKI--------- 120
C+ H W +F F LSST+LYFLFF+EA M Y+A++ LDIIS+K I I ++I
Sbjct: 63 CTHHLWMVFSFILSSTSLYFLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPNDD 122
Query: 121 ----NATNDHFSVSSSFHMHQLQYDRPFAAIVLRKLYFLSVLSALLAATAFQLYMSYYSL 169
+ ++D+ + SF + L Y PF +V RK+Y S + LLA AF+LY L
Sbjct: 123 EAGDSISSDNGWLELSFQVQLLPY-HPF-TLVQRKVYIASTIFTLLAVAAFELYTCKLLL 182
BLAST of Sed0010999 vs. ExPASy TrEMBL
Match:
A0A5A7TGW8 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00800 PE=4 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 3.1e-26
Identity = 81/182 (44.51%), Postives = 112/182 (61.54%), Query Frame = 0
Query: 1 MELAELKREFDDWKGVGEQQETRVRYHETRAHNIAMAYLIWERVFALGMHHFYIPNSHLI 60
M+L LKR FD K + E+QE RVRY+ETRA N+A+A LIW+R+F +GM+H S L
Sbjct: 3 MDLGVLKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 CS-HWWTLFGFSLSSTALYFLFFVEAAIMWYQARSHLDIISQKIITILIKINAT------ 120
C+ H W + GFSL+ST+LY LFF+EA M Y+A++ LDIIS++ I I ++I T
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKRQIEISLQILNTGSPNDD 122
Query: 121 -------NDHFSVSSSFHMHQLQYDRPFAAIVLRKLYFLSVLSALLAATAFQLYMSYYSL 169
+D+ + SF + LQY +V RK+Y S +S LLA AF++Y L
Sbjct: 123 EAGDTFSSDNGGLELSFQVQLLQYHP--LTVVQRKIYIASTISTLLAVAAFEVYTCKLLL 182
BLAST of Sed0010999 vs. ExPASy TrEMBL
Match:
A0A5D3C430 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00780 PE=4 SV=1)
HSP 1 Score: 122.5 bits (306), Expect = 1.7e-24
Identity = 82/183 (44.81%), Postives = 109/183 (59.56%), Query Frame = 0
Query: 1 MELAELKREFDDWKGVGEQQETRVRYHETRAHNIAMAYLIWERVFALGMHHFYIPNSHLI 60
M ELKR+FD K + E+QE RVRY+ETRA N+ +A LIW R+F +GM+H S L
Sbjct: 3 MRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWYRLFVVGMYHISSSLSLLN 62
Query: 61 CS-HWWTLFGFSLSSTALYFLFFVEAAIMWYQARSHLDII--SQKIITILIKINATNDHF 120
C+ H W + GFSL+ST+LY LFF+EA M Y+A++ LDII Q I+ I D +
Sbjct: 63 CTHHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIIYKQQNEISQQILNTGNPDDY 122
Query: 121 ----SVSS-------SFHMHQL-QYDRPFAAIVLRKLYFLSVLSALLAATAFQLYMSYYS 169
S+SS SF + L +Y RP +V RK+Y S +S LLA AF++Y
Sbjct: 123 EGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKVYIASTISTLLAVAAFEVYTCKLL 182
BLAST of Sed0010999 vs. ExPASy TrEMBL
Match:
A0A1S3ATY9 (uncharacterized protein LOC103482931 OS=Cucumis melo OX=3656 GN=LOC103482931 PE=4 SV=1)
HSP 1 Score: 114.0 bits (284), Expect = 6.1e-22
Identity = 62/111 (55.86%), Postives = 82/111 (73.87%), Query Frame = 0
Query: 1 MELAELKREFDDWKGVGEQQETRVRYHETRAHNIAMAYLIWERVFALGMHHFYIPNSHLI 60
MEL ELKR FD K + E+QE RVRY+ETRA N+A+A LIW+R+F +GM+H S L
Sbjct: 3 MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 CS-HWWTLFGFSLSSTALYFLFFVEAAIMWYQARSHLDIISQKIITILIKI 111
C+ H W + GFSL+ST+LY LFF+EA M Y+A++ LDIIS+K I I ++I
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQI 113
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
ADN33782.1 | 1.5e-27 | 46.15 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
KAA0042580.1 | 6.4e-26 | 44.51 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
KAA0042578.1 | 3.5e-24 | 44.81 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
XP_008437551.1 | 1.3e-21 | 55.86 | PREDICTED: uncharacterized protein LOC103482931 [Cucumis melo] | [more] |
XP_011654636.1 | 2.1e-21 | 55.86 | uncharacterized protein LOC105435427 [Cucumis sativus] >KAE8647813.1 hypothetica... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
E5GBE1 | 7.4e-28 | 46.15 | Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
A0A0A0KM15 | 1.4e-26 | 46.15 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1 | [more] |
A0A5A7TGW8 | 3.1e-26 | 44.51 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A5D3C430 | 1.7e-24 | 44.81 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A1S3ATY9 | 6.1e-22 | 55.86 | uncharacterized protein LOC103482931 OS=Cucumis melo OX=3656 GN=LOC103482931 PE=... | [more] |
Match Name | E-value | Identity | Description | |