Sed0010886 (gene) Chayote v1

Overview


Name	Sed0010886
Type	gene
Organism	Sechium edule (Chayote v1)
Description	expansin-B18-like
Location	LG04: 7374194 .. 7375420 (+)
RNA-Seq Expression	Sed0010886
Synteny	Sed0010886

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACATAATTTTCGCCAATACTCCATTTTGTTTGGTGCCCTAATTATTTGTGTTTCACTAACTGCCCCTTGCTTTGGATTCCATCCCAAGTCCTTTAATGTGTGGTCTAACAATGAGTCTTATGTTGTTTCTAATTGGTCCCCGGCCGTTGCCACCTGGTACGGCCCACCTAACGGTGTCGGGAGCGATGGTACAACTATACACCCTACTTTGCGCTAAGATTAACATGTCTTAATCAATTGAATGATGTATATAGTTTTCATATTTAGGTGGGTCATGTGGGTACGGAAATACGGTGGCACAAGTACCATTTTCATCGTTCATTACGGCAGTAGGCCCTTCATTGTATAATTCCGGAAATCTTGTGGAGCTTGTTATGAGGTAGCCATTAATTTCTAGTATTTTAAAAGGTATTAGTTATAATGAAATATTTATGCTATTTAAACATTTGTGATCGATCAGGTGAAATGTTTGGGAATAGGTGCGTGCTCAGGGATTTCAGTGACAGTGGTTATAATTGATAGTTGTCCAGGCGGCCCATGTGCTTCTGACGTCGTTCATTTCGACCTCAGTGGCACTGCTTTTGGTGCTTTGGCTACGCACGGTAATGCCGATAAACTCCGTTCTATCGGCGTTCTCCAAATTCAACATAGAAGGTATACCTATATCTAACTTTTAATTAATCTCAAAAATTAAATTCTCTTTAAAGACAAAATTAGTAGATTTTTATTTAATATAATATTTAAGGGAAGTACATTTATTTTATTGTCAAATATGCACTTGTTTTTCTTTATGTATTGAGTATTTAATTACCTTGTTTATAATGTCTTGTAAGAAAAAAAAATTTAAAATAATTATTTCAATTGATATACGTATTGGGAGTGCAGGGTGCAATGTAAATATTCAGGAACATCGATTAGTTTTGTGGTGGACAAAGGGTCGAACTCGAACTATTTCGCAACACTAATCGAATACGAAAATGGAGATGGAGATCTTGGTTCGGTGCAACTAAAACCGAGTGGCTCAAACTCATGGCTTCCAATGAGTCAGTCATGGGGTGCGATTTGGAAGCTCGACTCGGGCTCTGTCCTTCACCCTCCCTTCTCCCTCAGGCTCACCACCCTCAACTCGGCCAACACCATAGTAGCTAACAATGTAATTCCCATCGGTTGGAAGCCTGGAAACACTTATAGATCAGTCGTCAATTTCCATACTAATAATTAA

mRNA sequence

ATGGCACATAATTTTCGCCAATACTCCATTTTGTTTGGTGCCCTAATTATTTGTGTTTCACTAACTGCCCCTTGCTTTGGATTCCATCCCAAGTCCTTTAATGTGTGGTCTAACAATGAGTCTTATGTTGTTTCTAATTGGTCCCCGGCCGTTGCCACCTGGTACGGCCCACCTAACGGTGTCGGGAGCGATGGTGGGTCATGTGGGTACGGAAATACGGTGGCACAAGTACCATTTTCATCGTTCATTACGGCAGTAGGCCCTTCATTGTATAATTCCGGAAATCTTGTGAAATGTTTGGGAATAGGTGCGTGCTCAGGGATTTCAGTGACAGTGGTTATAATTGATAGTTGTCCAGGCGGCCCATGTGCTTCTGACGTCGTTCATTTCGACCTCAGTGGCACTGCTTTTGGTGCTTTGGCTACGCACGGTAATGCCGATAAACTCCGTTCTATCGGCGTTCTCCAAATTCAACATAGAAGGGTGCAATGTAAATATTCAGGAACATCGATTAGTTTTGTGGTGGACAAAGGGTCGAACTCGAACTATTTCGCAACACTAATCGAATACGAAAATGGAGATGGAGATCTTGGTTCGGTGCAACTAAAACCGAGTGGCTCAAACTCATGGCTTCCAATGAGTCAGTCATGGGGTGCGATTTGGAAGCTCGACTCGGGCTCTGTCCTTCACCCTCCCTTCTCCCTCAGGCTCACCACCCTCAACTCGGCCAACACCATAGTAGCTAACAATGTAATTCCCATCGGTTGGAAGCCTGGAAACACTTATAGATCAGTCGTCAATTTCCATACTAATAATTAA

Coding sequence (CDS)

ATGGCACATAATTTTCGCCAATACTCCATTTTGTTTGGTGCCCTAATTATTTGTGTTTCACTAACTGCCCCTTGCTTTGGATTCCATCCCAAGTCCTTTAATGTGTGGTCTAACAATGAGTCTTATGTTGTTTCTAATTGGTCCCCGGCCGTTGCCACCTGGTACGGCCCACCTAACGGTGTCGGGAGCGATGGTGGGTCATGTGGGTACGGAAATACGGTGGCACAAGTACCATTTTCATCGTTCATTACGGCAGTAGGCCCTTCATTGTATAATTCCGGAAATCTTGTGAAATGTTTGGGAATAGGTGCGTGCTCAGGGATTTCAGTGACAGTGGTTATAATTGATAGTTGTCCAGGCGGCCCATGTGCTTCTGACGTCGTTCATTTCGACCTCAGTGGCACTGCTTTTGGTGCTTTGGCTACGCACGGTAATGCCGATAAACTCCGTTCTATCGGCGTTCTCCAAATTCAACATAGAAGGGTGCAATGTAAATATTCAGGAACATCGATTAGTTTTGTGGTGGACAAAGGGTCGAACTCGAACTATTTCGCAACACTAATCGAATACGAAAATGGAGATGGAGATCTTGGTTCGGTGCAACTAAAACCGAGTGGCTCAAACTCATGGCTTCCAATGAGTCAGTCATGGGGTGCGATTTGGAAGCTCGACTCGGGCTCTGTCCTTCACCCTCCCTTCTCCCTCAGGCTCACCACCCTCAACTCGGCCAACACCATAGTAGCTAACAATGTAATTCCCATCGGTTGGAAGCCTGGAAACACTTATAGATCAGTCGTCAATTTCCATACTAATAATTAA

Protein sequence

MAHNFRQYSILFGALIICVSLTAPCFGFHPKSFNVWSNNESYVVSNWSPAVATWYGPPNGVGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSGNLVKCLGIGACSGISVTVVIIDSCPGGPCASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISFVVDKGSNSNYFATLIEYENGDGDLGSVQLKPSGSNSWLPMSQSWGAIWKLDSGSVLHPPFSLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNFHTNN

Homology

[Close]

BLAST of Sed0010886 vs. NCBI nr
Match: XP_022924767.1 (putative expansin-B2 [Cucurbita moschata])

HSP 1 Score: 365.2 bits (936), Expect = 5.1e-97
Identity = 188/277 (67.87%), Postives = 214/277 (77.26%), Query Frame = 0


Query: 3   HNFRQY--SILFGALIICVSLTAPCFGFHPKSFNVWSNNESYVVSNWSPAVATWYGPPNG 62
           H++  Y  S+LF AL + +SLT PCF FHPKSFNV S  +SY   +WSPA+ATWYG PNG
Sbjct: 7   HHYYYYYCSLLFPAL-LSLSLT-PCFCFHPKSFNV-SMYQSY-DPDWSPAIATWYGTPNG 66

Query: 63  VGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSGNL------VKCLGIGACSGISVTVVI 122
            GSDGGSCGYG  V + PFSS I A GPSLY SG        VKC G GACSG  VTVVI
Sbjct: 67  AGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGGPVTVVI 126

Query: 123 IDSCPGGPCASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISFV 182
            DSCPGG CASD VHFDLSGTAFGA+A  G AD+LRS+GVL IQH+ V+C Y GTSI+F+
Sbjct: 127 TDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHKSVECNYPGTSINFI 186

Query: 183 VDKGSNSNYFATLIEYENGDGDLGSVQLKPS-GSNSWLPMSQSWGAIWKLDSGSVLHPPF 242
           VD GSN NYFA LIEYE+GDG+LG V+LKP+  S SW+PM QSWGA+WKLDS S L PPF
Sbjct: 187 VDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGAVWKLDSASALQPPF 246

Query: 243 SLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNFHT 271
           SLRLT L+S  T+VANNVIP+GW+PG TYRSVVNF T
Sbjct: 247 SLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNFDT 279

[Close]

BLAST of Sed0010886 vs. NCBI nr
Match: XP_008437785.1 (PREDICTED: putative expansin-B2 [Cucumis melo])

HSP 1 Score: 364.4 bits (934), Expect = 8.6e-97
Identity = 184/267 (68.91%), Postives = 207/267 (77.53%), Query Frame = 0


Query: 10  ILFGALIICVSLTAPCFGFHPKSFNVWSNNESYVVSNWSPAVATWYGPPNGVGSDGGSCG 69
           + F ALII +SLT   F FHPKSFNV S  +SY  S+WSPAVATWYGPP+G GSDGGSCG
Sbjct: 5   LFFAALIISLSLTPTSFCFHPKSFNV-SKYQSY-DSDWSPAVATWYGPPDGAGSDGGSCG 64

Query: 70  YGNTVAQVPFSSFITAVGPSLYNSGNL------VKCLGIGACSGISVTVVIIDSCPGGPC 129
           YG  V Q PFSSFI A GPSLY +G        VKC G  ACSG  VTVVI DSCPGG C
Sbjct: 65  YGKAVEQPPFSSFIAAGGPSLYKNGQACGACYQVKCSGESACSGNPVTVVITDSCPGGSC 124

Query: 130 ASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISFVVDKGSNSNY 189
           ASD VHFDLSGTAFGA+A  G A++LRS+GVL IQH+RV+C Y GTSI+F+VD GSNSNY
Sbjct: 125 ASDSVHFDLSGTAFGAMAATGRAEELRSLGVLHIQHKRVECNYPGTSINFIVDSGSNSNY 184

Query: 190 FATLIEYENGDGDLGSVQLKPSG--SNSWLPMSQSWGAIWKLDSGSVLHPPFSLRLTTLN 249
           FA LIEYE+GDG+LGSV+LK     SNSW+PM +SWGA+WKLD GS L  PFSLRLT L 
Sbjct: 185 FAALIEYEDGDGELGSVELKQGALDSNSWIPMKRSWGAVWKLDYGSALQAPFSLRLTALE 244

Query: 250 SANTIVANNVIPIGWKPGNTYRSVVNF 269
           S  T+VANNVIP GW+PG +YRSVVNF
Sbjct: 245 SGKTVVANNVIPAGWQPGKSYRSVVNF 269

[Close]

BLAST of Sed0010886 vs. NCBI nr
Match: XP_004133769.1 (putative expansin-B2 [Cucumis sativus] >KGN56356.1 hypothetical protein Csa_011646 [Cucumis sativus])

HSP 1 Score: 364.0 bits (933), Expect = 1.1e-96
Identity = 183/267 (68.54%), Postives = 204/267 (76.40%), Query Frame = 0


Query: 10  ILFGALIICVSLTAPCFGFHPKSFNVWSNNESYVVSNWSPAVATWYGPPNGVGSDGGSCG 69
           + F ALII +SL  P F FHPKSFNV         S+WSPAVATWYGPP+G GSDGGSCG
Sbjct: 5   LFFAALIISLSLAPPSFCFHPKSFNVSKYQSD--DSDWSPAVATWYGPPDGAGSDGGSCG 64

Query: 70  YGNTVAQVPFSSFITAVGPSLYNSGNL------VKCLGIGACSGISVTVVIIDSCPGGPC 129
           YG  V Q PFSSFI A GPSLY  G        VKC G GACSG  VTVVI DSCPGG C
Sbjct: 65  YGKAVEQPPFSSFIAAGGPSLYKYGQACGACYQVKCSGEGACSGNPVTVVITDSCPGGSC 124

Query: 130 ASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISFVVDKGSNSNY 189
           ASD VHFDLSGTAFGA+A  G A++LRS+GVL IQH+RV+C Y GTSI+F+VD GSNSNY
Sbjct: 125 ASDSVHFDLSGTAFGAMAATGRAEELRSLGVLHIQHKRVECNYPGTSINFIVDSGSNSNY 184

Query: 190 FATLIEYENGDGDLGSVQLKPSG--SNSWLPMSQSWGAIWKLDSGSVLHPPFSLRLTTLN 249
           FA LIEYE+GDG+LGSV+LK     SNSW+PM QSWGA+WKLDSGS L  PFSLRLT L+
Sbjct: 185 FAALIEYEDGDGELGSVELKQGAVDSNSWIPMKQSWGAVWKLDSGSALQAPFSLRLTALD 244

Query: 250 SANTIVANNVIPIGWKPGNTYRSVVNF 269
           S  T+VANNVIP GW+ G +YRSVVNF
Sbjct: 245 SGKTVVANNVIPAGWQAGKSYRSVVNF 269

[Close]

BLAST of Sed0010886 vs. NCBI nr
Match: XP_023528384.1 (putative expansin-B2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.3 bits (926), Expect = 7.3e-96
Identity = 185/269 (68.77%), Postives = 210/269 (78.07%), Query Frame = 0


Query: 9   SILFGALIICVSLTAPCFGFHPKSFNVWSNNESYVVSNWSPAVATWYGPPNGVGSDGGSC 68
           S+LF AL + +SLT PCF FHPKSFNV S  +SY   +WSPA+ATWYG PNG GSDGGSC
Sbjct: 16  SLLFPAL-LSLSLT-PCFCFHPKSFNV-SMYQSY-DPDWSPAIATWYGTPNGAGSDGGSC 75

Query: 69  GYGNTVAQVPFSSFITAVGPSLYNSGNL------VKCLGIGACSGISVTVVIIDSCPGGP 128
           GYG  V + PFSS I A GPSLY SG        VKC G GACSG  VTVVI DSCPGG 
Sbjct: 76  GYGRAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGSPVTVVITDSCPGGS 135

Query: 129 CASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISFVVDKGSNSN 188
           CASD VHFDLSGTAFGA+A  G AD+LRS+GVL IQH+RV+C Y GTSI+F+VD GSN +
Sbjct: 136 CASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHKRVECNYPGTSINFIVDSGSNPD 195

Query: 189 YFATLIEYENGDGDLGSVQLKPS-GSNSWLPMSQSWGAIWKLDSGSVLHPPFSLRLTTLN 248
           YFA LIEYE+GDG+LG V+LKP+  S SW+PM QSWGA+WKLDS S L PPFSLRLT L+
Sbjct: 196 YFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGAVWKLDSASALQPPFSLRLTALD 255

Query: 249 SANTIVANNVIPIGWKPGNTYRSVVNFHT 271
           S  T+VANNVIP+ W+PG TYRSVVNF T
Sbjct: 256 SGKTVVANNVIPVRWQPGQTYRSVVNFDT 280

[Close]

BLAST of Sed0010886 vs. NCBI nr
Match: XP_022151532.1 (putative expansin-B2 isoform X2 [Momordica charantia])

HSP 1 Score: 355.9 bits (912), Expect = 3.1e-94
Identity = 181/277 (65.34%), Postives = 205/277 (74.01%), Query Frame = 0


Query: 1   MAHNFRQYSILFGALIICVSLTAPCFGFHPKSFNVWSNNESYVVSNWSPAVATWYGPPNG 60
           M H    YS+ F A ++ VSL  P F FHPKSFNV  +      S+WSPAVATWYG  +G
Sbjct: 1   MPHFHHYYSLFFFAALLSVSLITPSFSFHPKSFNV--SMYQSPDSDWSPAVATWYGSRDG 60

Query: 61  VGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSGNL------VKCLGIGACSGISVTVVI 120
            GSDGG+CGYG  V Q PFSS I A GPSLY SG        VKC    ACSG  VTVVI
Sbjct: 61  AGSDGGACGYGEAVEQPPFSSLIAAGGPSLYKSGKACGACYQVKCSEKAACSGNPVTVVI 120

Query: 121 IDSCPGGPCASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISFV 180
            DSCPGG CASD VHFDLSGTAFGA+A  G AD+LR++GVLQIQH+RV+C Y G SI+FV
Sbjct: 121 TDSCPGGSCASDSVHFDLSGTAFGAMAAAGRADELRNLGVLQIQHKRVECNYPGRSINFV 180

Query: 181 VDKGSNSNYFATLIEYENGDGDLGSVQLKPS-GSNSWLPMSQSWGAIWKLDSGSVLHPPF 240
           VD GSNSNYFA LIEY +GDGD+GSV+LK +  S SW PM QSWGA+WKLDSGS L  PF
Sbjct: 181 VDSGSNSNYFAALIEYGDGDGDVGSVELKQALDSYSWTPMQQSWGAVWKLDSGSALQAPF 240

Query: 241 SLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNFHT 271
           SL+LT+L+S  T+VANNVIP GWKPG TYRS+VNF T
Sbjct: 241 SLKLTSLDSGKTVVANNVIPAGWKPGQTYRSLVNFDT 275

[Close]

BLAST of Sed0010886 vs. ExPASy Swiss-Prot
Match: Q7XT40 (Expansin-B15 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB15 PE=3 SV=2)

HSP 1 Score: 282.7 bits (722), Expect = 4.3e-75
Identity = 149/277 (53.79%), Postives = 179/277 (64.62%), Query Frame = 0


Query: 1   MAHNFRQYSILFGALIICVSLTAPC--FGFHPKSFNVWSNNESYVVSNWSPAVATWYGPP 60
           MA  F+     F  +     L  PC    FH K            +S+WS   ATWYG  
Sbjct: 1   MASRFQLILSTFVVIAAVTMLPRPCASIEFHRK------------LSSWSNGGATWYGAA 60

Query: 61  NGVGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSG------NLVKCLGIGACSGISVTV 120
           NG GSDGG+CGY   V Q PFSS I A  PS+Y SG        VKC G  ACSG  VTV
Sbjct: 61  NGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSACSGNPVTV 120

Query: 121 VIIDSCPGGPCASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSIS 180
           V+ D CPGGPC S+ VHFDLSGTAFGA+A  G AD+LR+ GVLQIQ+ RV C + G  ++
Sbjct: 121 VLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVKLT 180

Query: 181 FVVDKGSNSNYFATLIEYENGDGDLGSVQLKPSGSN-SWLPMSQSWGAIWKLDSGSVLHP 240
           FVVD GSN NYFA L++YENGDGDL  V+L  +G+  +W  M QSWGA+WKL++GS L  
Sbjct: 181 FVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQA 240

Query: 241 PFSLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNF 269
           PFS+RLT+ +S  T+VA+NVIP GWKPG +Y S VNF
Sbjct: 241 PFSIRLTS-SSGKTLVASNVIPSGWKPGMSYISTVNF 264

[Close]

BLAST of Sed0010886 vs. ExPASy Swiss-Prot
Match: Q5W6Z9 (Expansin-B18 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB18 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.8e-72
Identity = 134/232 (57.76%), Postives = 164/232 (70.69%), Query Frame = 0


Query: 44  VSNWSPAVATWYGPPNGVGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSG------NLV 103
           +S+WS   ATWYG  NG GSDGG+CGY   V Q PFSS I A  PS+Y SG        V
Sbjct: 34  LSSWSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQV 93

Query: 104 KCLGIGACSGISVTVVIIDSCPGGPCASDVVHFDLSGTAFGALATHGNADKLRSIGVLQI 163
           KC G  ACSG  VTVV+ D CPGGPC S+ VHFDLSGTAFGA+A  G AD+LR+ GVLQI
Sbjct: 94  KCSGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQI 153

Query: 164 QHRRVQCKYSGTSISFVVDKGSNSNYFATLIEYENGDGDLGSVQLKPSGSN-SWLPMSQS 223
           Q+ RV C + G  ++F VD GSN +YFA L++YENGDGDL  + L  +G+  +W PM QS
Sbjct: 154 QYNRVPCNWGGVMLTFAVDAGSNPSYFAVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQS 213

Query: 224 WGAIWKLDSGSVLHPPFSLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNF 269
           WGA+WKL +G+ L  P S+RLT+ +S  T+VA+NVIP GWKPG +Y S VN+
Sbjct: 214 WGAVWKLSAGAALQAPLSIRLTS-SSGKTLVASNVIPSGWKPGASYTSTVNY 264

[Close]

BLAST of Sed0010886 vs. ExPASy Swiss-Prot
Match: Q9SHY6 (Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2)

HSP 1 Score: 269.2 bits (687), Expect = 4.9e-71
Identity = 141/267 (52.81%), Postives = 181/267 (67.79%), Query Frame = 0


Query: 9   SILFGALIICVSLTAPCFGFHPKSFNVWSNNESYVVSNWSPAVATWYGPPNGVGSDGGSC 68
           ++LF    + ++LT  CF   PK FN+ +   S   S+WS A +TWYG P G GSDGG+C
Sbjct: 14  NLLFALTCLLLNLT-HCFS--PKKFNISAATTS--DSDWSIAGSTWYGNPTGYGSDGGAC 73

Query: 69  GYGNTVAQVPFSSFITAVGPSLYNSGN------LVKCLGIGACSGISVTVVIIDSCPGGP 128
           GYGN VAQ PFS  ++A GPSL+ SG        VKC    ACS   VTVVI D CPG  
Sbjct: 74  GYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITDECPG-- 133

Query: 129 CASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISFVVDKGSNSN 188
           C  + VHFDLSGTAFGA+A  G   +LR++G LQI +++V+C Y G +++F VDKGSN+N
Sbjct: 134 CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNAN 193

Query: 189 YFATLIEYENGDGDLGSVQLKPS-GSNSWLPMSQSWGAIWKLDSGSVLHPPFSLRLTTLN 248
            FA L+ Y NGDG++G ++LK +  S+ WL MSQSWGA+WKLD  S L  P SLR+T+L 
Sbjct: 194 SFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLE 253

Query: 249 SANTIVANNVIPIGWKPGNTYRSVVNF 269
           S  T+VA+NVIP  W+PG  Y+S VNF
Sbjct: 254 SGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of Sed0010886 vs. ExPASy Swiss-Prot
Match: Q6H676 (Expansin-B11 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB11 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.3e-66
Identity = 131/234 (55.98%), Postives = 160/234 (68.38%), Query Frame = 0


Query: 43  VVSNWSPAVATWYGPPNGVGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSGN------L 102
           V + W+ A AT+YG PNG GSDGG+CGY   V Q PFSS I A  PSLY  G        
Sbjct: 60  VTTGWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYE 119

Query: 103 VKCLGIGACSGISVTVVIIDSCPGGPCASDVVHFDLSGTAFGALATHGNADKLRSIGVLQ 162
           VKC    ACSG   TVVI D CPGG C +   HFD+SGT+ GA+A  G ADKLR+ G+LQ
Sbjct: 120 VKCTTNAACSGQPATVVITDECPGGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQ 179

Query: 163 IQHRRVQCKYSGTSISFVVDKGSNSNYFATLIEYENGDGDLGSVQLKPSGSNSWLPMSQS 222
           +Q+RRV CKYSG +I+F VD+G+N  YF  LIE+E+GDGDL +V L  +G   W PM Q+
Sbjct: 180 VQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGC-GWTPMVQN 239

Query: 223 WGAIWKLDS--GSVLHPPFSLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNF 269
           WGA+W+ +S  G  L  PFSLRLT+ +S   +VANNVIP  WKPG TYRS+VN+
Sbjct: 240 WGALWRYNSNTGKALKAPFSLRLTS-DSGKVLVANNVIPASWKPGVTYRSLVNY 291

[Close]

BLAST of Sed0010886 vs. ExPASy Swiss-Prot
Match: Q6H677 (Putative expansin-B14 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB14 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.4e-65
Identity = 130/236 (55.08%), Postives = 158/236 (66.95%), Query Frame = 0


Query: 44  VSNWSPAVATWYGPPNGVGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSGN------LV 103
           +S WS   ATWYGP NG G+DGG+CGY   V Q PF+S I A  PS+Y SG        V
Sbjct: 35  LSGWSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQV 94

Query: 104 KCLGIGACSGISVTVVIIDSCPGGPCASDVVHFDLSGTAFGALATHGNADKLRSIGVLQI 163
           KC G  +CSG  VTVV+ D CPGG C  + VHFDLSGTAFGA+A  G  D+LR+ G L +
Sbjct: 95  KCSGNPSCSGKPVTVVLTDLCPGGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPV 154

Query: 164 QHRRVQCKYSGTSISFVVDKGSNSNYFATLIEYENGDGDLGSVQLKPSGSN----SWLPM 223
           Q+ RV CK+ G  I+F VD GSN  Y A L+E E+GDGDL +V L  SG +    SW  M
Sbjct: 155 QYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAM 214

Query: 224 SQSWGAIWKLDSG-SVLHPPFSLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNF 269
            QSWGA+WK +SG + L  P S+RLT+  S  T+VA+NVIP GW+PG TYRS+VNF
Sbjct: 215 QQSWGAVWKYNSGPAPLQAPMSIRLTS-GSGRTLVASNVIPAGWQPGGTYRSIVNF 269

[Close]

BLAST of Sed0010886 vs. ExPASy TrEMBL
Match: A0A6J1E9X0 (putative expansin-B2 OS=Cucurbita moschata OX=3662 GN=LOC111432169 PE=3 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.4e-97
Identity = 188/277 (67.87%), Postives = 214/277 (77.26%), Query Frame = 0


Query: 3   HNFRQY--SILFGALIICVSLTAPCFGFHPKSFNVWSNNESYVVSNWSPAVATWYGPPNG 62
           H++  Y  S+LF AL + +SLT PCF FHPKSFNV S  +SY   +WSPA+ATWYG PNG
Sbjct: 7   HHYYYYYCSLLFPAL-LSLSLT-PCFCFHPKSFNV-SMYQSY-DPDWSPAIATWYGTPNG 66

Query: 63  VGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSGNL------VKCLGIGACSGISVTVVI 122
            GSDGGSCGYG  V + PFSS I A GPSLY SG        VKC G GACSG  VTVVI
Sbjct: 67  AGSDGGSCGYGKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGGPVTVVI 126

Query: 123 IDSCPGGPCASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISFV 182
            DSCPGG CASD VHFDLSGTAFGA+A  G AD+LRS+GVL IQH+ V+C Y GTSI+F+
Sbjct: 127 TDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHKSVECNYPGTSINFI 186

Query: 183 VDKGSNSNYFATLIEYENGDGDLGSVQLKPS-GSNSWLPMSQSWGAIWKLDSGSVLHPPF 242
           VD GSN NYFA LIEYE+GDG+LG V+LKP+  S SW+PM QSWGA+WKLDS S L PPF
Sbjct: 187 VDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGAVWKLDSASALQPPF 246

Query: 243 SLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNFHT 271
           SLRLT L+S  T+VANNVIP+GW+PG TYRSVVNF T
Sbjct: 247 SLRLTALDSGKTVVANNVIPVGWQPGQTYRSVVNFDT 279

[Close]

BLAST of Sed0010886 vs. ExPASy TrEMBL
Match: A0A1S3AUH4 (putative expansin-B2 OS=Cucumis melo OX=3656 GN=LOC103483118 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 4.2e-97
Identity = 184/267 (68.91%), Postives = 207/267 (77.53%), Query Frame = 0


Query: 10  ILFGALIICVSLTAPCFGFHPKSFNVWSNNESYVVSNWSPAVATWYGPPNGVGSDGGSCG 69
           + F ALII +SLT   F FHPKSFNV S  +SY  S+WSPAVATWYGPP+G GSDGGSCG
Sbjct: 5   LFFAALIISLSLTPTSFCFHPKSFNV-SKYQSY-DSDWSPAVATWYGPPDGAGSDGGSCG 64

Query: 70  YGNTVAQVPFSSFITAVGPSLYNSGNL------VKCLGIGACSGISVTVVIIDSCPGGPC 129
           YG  V Q PFSSFI A GPSLY +G        VKC G  ACSG  VTVVI DSCPGG C
Sbjct: 65  YGKAVEQPPFSSFIAAGGPSLYKNGQACGACYQVKCSGESACSGNPVTVVITDSCPGGSC 124

Query: 130 ASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISFVVDKGSNSNY 189
           ASD VHFDLSGTAFGA+A  G A++LRS+GVL IQH+RV+C Y GTSI+F+VD GSNSNY
Sbjct: 125 ASDSVHFDLSGTAFGAMAATGRAEELRSLGVLHIQHKRVECNYPGTSINFIVDSGSNSNY 184

Query: 190 FATLIEYENGDGDLGSVQLKPSG--SNSWLPMSQSWGAIWKLDSGSVLHPPFSLRLTTLN 249
           FA LIEYE+GDG+LGSV+LK     SNSW+PM +SWGA+WKLD GS L  PFSLRLT L 
Sbjct: 185 FAALIEYEDGDGELGSVELKQGALDSNSWIPMKRSWGAVWKLDYGSALQAPFSLRLTALE 244

Query: 250 SANTIVANNVIPIGWKPGNTYRSVVNF 269
           S  T+VANNVIP GW+PG +YRSVVNF
Sbjct: 245 SGKTVVANNVIPAGWQPGKSYRSVVNF 269

[Close]

BLAST of Sed0010886 vs. ExPASy TrEMBL
Match: A0A0A0L8B4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117420 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 5.5e-97
Identity = 183/267 (68.54%), Postives = 204/267 (76.40%), Query Frame = 0


Query: 10  ILFGALIICVSLTAPCFGFHPKSFNVWSNNESYVVSNWSPAVATWYGPPNGVGSDGGSCG 69
           + F ALII +SL  P F FHPKSFNV         S+WSPAVATWYGPP+G GSDGGSCG
Sbjct: 5   LFFAALIISLSLAPPSFCFHPKSFNVSKYQSD--DSDWSPAVATWYGPPDGAGSDGGSCG 64

Query: 70  YGNTVAQVPFSSFITAVGPSLYNSGNL------VKCLGIGACSGISVTVVIIDSCPGGPC 129
           YG  V Q PFSSFI A GPSLY  G        VKC G GACSG  VTVVI DSCPGG C
Sbjct: 65  YGKAVEQPPFSSFIAAGGPSLYKYGQACGACYQVKCSGEGACSGNPVTVVITDSCPGGSC 124

Query: 130 ASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISFVVDKGSNSNY 189
           ASD VHFDLSGTAFGA+A  G A++LRS+GVL IQH+RV+C Y GTSI+F+VD GSNSNY
Sbjct: 125 ASDSVHFDLSGTAFGAMAATGRAEELRSLGVLHIQHKRVECNYPGTSINFIVDSGSNSNY 184

Query: 190 FATLIEYENGDGDLGSVQLKPSG--SNSWLPMSQSWGAIWKLDSGSVLHPPFSLRLTTLN 249
           FA LIEYE+GDG+LGSV+LK     SNSW+PM QSWGA+WKLDSGS L  PFSLRLT L+
Sbjct: 185 FAALIEYEDGDGELGSVELKQGAVDSNSWIPMKQSWGAVWKLDSGSALQAPFSLRLTALD 244

Query: 250 SANTIVANNVIPIGWKPGNTYRSVVNF 269
           S  T+VANNVIP GW+ G +YRSVVNF
Sbjct: 245 SGKTVVANNVIPAGWQAGKSYRSVVNF 269

[Close]

BLAST of Sed0010886 vs. ExPASy TrEMBL
Match: A0A6J1DDS1 (putative expansin-B2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019444 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.5e-94
Identity = 181/277 (65.34%), Postives = 205/277 (74.01%), Query Frame = 0


Query: 1   MAHNFRQYSILFGALIICVSLTAPCFGFHPKSFNVWSNNESYVVSNWSPAVATWYGPPNG 60
           M H    YS+ F A ++ VSL  P F FHPKSFNV  +      S+WSPAVATWYG  +G
Sbjct: 1   MPHFHHYYSLFFFAALLSVSLITPSFSFHPKSFNV--SMYQSPDSDWSPAVATWYGSRDG 60

Query: 61  VGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSGNL------VKCLGIGACSGISVTVVI 120
            GSDGG+CGYG  V Q PFSS I A GPSLY SG        VKC    ACSG  VTVVI
Sbjct: 61  AGSDGGACGYGEAVEQPPFSSLIAAGGPSLYKSGKACGACYQVKCSEKAACSGNPVTVVI 120

Query: 121 IDSCPGGPCASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISFV 180
            DSCPGG CASD VHFDLSGTAFGA+A  G AD+LR++GVLQIQH+RV+C Y G SI+FV
Sbjct: 121 TDSCPGGSCASDSVHFDLSGTAFGAMAAAGRADELRNLGVLQIQHKRVECNYPGRSINFV 180

Query: 181 VDKGSNSNYFATLIEYENGDGDLGSVQLKPS-GSNSWLPMSQSWGAIWKLDSGSVLHPPF 240
           VD GSNSNYFA LIEY +GDGD+GSV+LK +  S SW PM QSWGA+WKLDSGS L  PF
Sbjct: 181 VDSGSNSNYFAALIEYGDGDGDVGSVELKQALDSYSWTPMQQSWGAVWKLDSGSALQAPF 240

Query: 241 SLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNFHT 271
           SL+LT+L+S  T+VANNVIP GWKPG TYRS+VNF T
Sbjct: 241 SLKLTSLDSGKTVVANNVIPAGWKPGQTYRSLVNFDT 275

[Close]

BLAST of Sed0010886 vs. ExPASy TrEMBL
Match: A0A6J1IR92 (putative expansin-B2 OS=Cucurbita maxima OX=3661 GN=LOC111479279 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.9e-94
Identity = 185/278 (66.55%), Postives = 211/278 (75.90%), Query Frame = 0


Query: 3   HNFRQY---SILFGALIICVSLTAPCFGFHPKSFNVWSNNESYVVSNWSPAVATWYGPPN 62
           H++  Y   S+LF AL + +SLT PCF F  KSFNV S  +SY + +WSPA+ATWYG PN
Sbjct: 5   HHYYYYYYCSLLFPAL-LSLSLT-PCFCFPLKSFNV-SMYQSYDL-DWSPAIATWYGTPN 64

Query: 63  GVGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSGNL------VKCLGIGACSGISVTVV 122
           G GSDGGSCGY   V + PFSS I A GPSLY SG        VKC G GACSG  VTVV
Sbjct: 65  GAGSDGGSCGYEKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGSPVTVV 124

Query: 123 IIDSCPGGPCASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISF 182
           I DSCPGG CASD VHFDLSGTAFGA+A  G AD+LRS+GVL IQH+RV+C Y GTSI+F
Sbjct: 125 ITDSCPGGSCASDSVHFDLSGTAFGAMAAPGRADELRSLGVLHIQHKRVECNYPGTSINF 184

Query: 183 VVDKGSNSNYFATLIEYENGDGDLGSVQLKPS-GSNSWLPMSQSWGAIWKLDSGSVLHPP 242
           +VD GSN NYFA LIEYE+GDG+LG V+LKP+  S SW+PM QSWGA+WKLDS S L PP
Sbjct: 185 IVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMQQSWGAVWKLDSASALQPP 244

Query: 243 FSLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNFHT 271
           FSLRLT L S  T+VAN VIP+GW+PG TYRSVVNF T
Sbjct: 245 FSLRLTALGSGKTVVANKVIPVGWQPGQTYRSVVNFDT 278

[Close]

BLAST of Sed0010886 vs. TAIR 10
Match: AT1G65680.1 (expansin B2 )

HSP 1 Score: 269.2 bits (687), Expect = 3.5e-72
Identity = 141/267 (52.81%), Postives = 181/267 (67.79%), Query Frame = 0


Query: 9   SILFGALIICVSLTAPCFGFHPKSFNVWSNNESYVVSNWSPAVATWYGPPNGVGSDGGSC 68
           ++LF    + ++LT  CF   PK FN+ +   S   S+WS A +TWYG P G GSDGG+C
Sbjct: 14  NLLFALTCLLLNLT-HCFS--PKKFNISAATTS--DSDWSIAGSTWYGNPTGYGSDGGAC 73

Query: 69  GYGNTVAQVPFSSFITAVGPSLYNSGN------LVKCLGIGACSGISVTVVIIDSCPGGP 128
           GYGN VAQ PFS  ++A GPSL+ SG        VKC    ACS   VTVVI D CPG  
Sbjct: 74  GYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITDECPG-- 133

Query: 129 CASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISFVVDKGSNSN 188
           C  + VHFDLSGTAFGA+A  G   +LR++G LQI +++V+C Y G +++F VDKGSN+N
Sbjct: 134 CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNAN 193

Query: 189 YFATLIEYENGDGDLGSVQLKPS-GSNSWLPMSQSWGAIWKLDSGSVLHPPFSLRLTTLN 248
            FA L+ Y NGDG++G ++LK +  S+ WL MSQSWGA+WKLD  S L  P SLR+T+L 
Sbjct: 194 SFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLE 253

Query: 249 SANTIVANNVIPIGWKPGNTYRSVVNF 269
           S  T+VA+NVIP  W+PG  Y+S VNF
Sbjct: 254 SGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of Sed0010886 vs. TAIR 10
Match: AT2G45110.1 (expansin B4 )

HSP 1 Score: 243.0 bits (619), Expect = 2.7e-64
Identity = 120/239 (50.21%), Postives = 161/239 (67.36%), Query Frame = 0


Query: 36  WSNNESYVVSNWSPAVATWYGPPNGVGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSGN 95
           +  NE+  V+    A  TWYG P G GS GG+CGYG+ VA  P  + ++A GPSL+N+G 
Sbjct: 22  YCQNETIDVAGSGTAGVTWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAGGPSLFNNGK 81

Query: 96  ------LVKCLGIGACSGISVTVVIIDSCPGGPCASDVVHFDLSGTAFGALATHGNADKL 155
                  V C+G  ACSG  +TV I D CPGGPCAS+ VH DLSG A GALA  G AD+L
Sbjct: 82  GCGTCYQVVCIGHPACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGALAKPGQADQL 141

Query: 156 RSIGVLQIQHRRVQCKYSGTSISFVVDKGSNSNYFATLIEYENGDGDLGSVQLKPSGSNS 215
           RS GV+++ ++R  C Y GT+I F +D G+N  Y + ++EYENGDGDL +V+++P+G  S
Sbjct: 142 RSAGVIRVNYKRAACLYRGTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQPAG-GS 201

Query: 216 WLPMSQSWGAIWKLDSGSVLHPPFSLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNF 269
           ++ M +   A+WK++SGS L  PF++RLT+  S   IVA NVIP  WKP  +YRS+VNF
Sbjct: 202 FISMQEMRSAVWKVNSGSALRGPFNIRLTSGESHKVIVAYNVIPANWKPDESYRSIVNF 259

[Close]

BLAST of Sed0010886 vs. TAIR 10
Match: AT1G65681.1 (beta expansin 6 )

HSP 1 Score: 209.5 bits (532), Expect = 3.3e-54
Identity = 105/215 (48.84%), Postives = 142/215 (66.05%), Query Frame = 0


Query: 60  GVGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSG------NLVKCLGIGACSGISVTVV 119
           G GS GG+CG+   VA  P    ++A GPS++N+G        + C G  ACS   +TV 
Sbjct: 11  GAGSTGGACGF--AVANPPLYGMVSAGGPSVFNNGIGCGTCFQILCNGHPACSRRPITVT 70

Query: 120 IIDSCPGGPCASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQHRRVQCKYSGTSISF 179
           I D CPGGPCAS+  HFDLSG A GALA  G  D+LRS GVL++ +RRV+C Y  T+I+F
Sbjct: 71  ITDECPGGPCASEPAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYRRVECLYRRTNIAF 130

Query: 180 VVDKGSNSNYFATLIEYENGDGDLGSVQLKPSGSNSWLPMSQSWGAIWKLDSGSVLHPPF 239
            +D G+N  Y + ++EYENGDGDL  ++++P+    ++PM +   A+WK+ SGS L  PF
Sbjct: 131 RMDPGANPYYISFVVEYENGDGDLAYIEIQPA-DGEFIPMQEMRSAVWKISSGSPLTGPF 190

Query: 240 SLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNF 269
           ++RLT+  S   ++A NVIP  WKP  TYRSVVNF
Sbjct: 191 NIRLTSAESHKVVLAYNVIPANWKPNETYRSVVNF 222

[Close]

BLAST of Sed0010886 vs. TAIR 10
Match: AT4G28250.1 (expansin B3 )

HSP 1 Score: 206.8 bits (525), Expect = 2.1e-53
Identity = 104/230 (45.22%), Postives = 145/230 (63.04%), Query Frame = 0


Query: 45  SNWSPAVATWYGPPNGVGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSGN------LVK 104
           S+W PAVATWYG PNG GSDGG+CGYG  V   P  + + AV P L+ +G        V+
Sbjct: 34  SHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVR 93

Query: 105 CLGIGACSGISVTVVIIDSCPGGPCASDVVHFDLSGTAFGALATHGNADKLRSIGVLQIQ 164
           CL    CS  +VTV+I D CPG  C+    HFDLSG  FG LA  G +  LR+ G++ + 
Sbjct: 94  CLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVI 153

Query: 165 HRRVQCKYSGTSISFVVDKGSNSNYFATLIEYENGDGDLGSVQLKPSGSNSWLPMSQSWG 224
           +RR  CKY G +I+F V++GS   + + L+E+E+G+GD+GS+ ++ +G+  WL M   WG
Sbjct: 154 YRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWG 213

Query: 225 AIWKLDSGSVLHPPFSLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNF 269
           A W +  G  L  PFS++LTTL++  T+ A +V+P  W P  TY S +NF
Sbjct: 214 ANWCI-IGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLNF 260

[Close]

BLAST of Sed0010886 vs. TAIR 10
Match: AT2G20750.1 (expansin B1 )

HSP 1 Score: 197.6 bits (501), Expect = 1.3e-50
Identity = 103/238 (43.28%), Postives = 143/238 (60.08%), Query Frame = 0


Query: 38  NNESYVVSNWSPAVATWYGPPNGVGSDGGSCGYGNTVAQVPFSSFITAVGPSLYNSGN-- 97
           +N+    + W PA ATWYG   G GS GG+CGYG+ V   PF + + AV P L+  G   
Sbjct: 31  SNQQVAATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGC 90

Query: 98  ----LVKCLGIGACSGISVTVVIIDSCPGGPCA-SDVVHFDLSGTAFGALATHGNADKLR 157
                V+CL    CS  +VT++  D  P GP A +   HFDLSG AFG +A  G+   +R
Sbjct: 91  GACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIR 150

Query: 158 SIGVLQIQHRRVQCKYSGTSISFVVDKGSNSNYFATLIEYENGDGDLGSVQLKPSGSNSW 217
           + G+L I +RR  CKY G +I+F V+ GS   + + LIEYE+G+GD+GS+ ++ +GS  W
Sbjct: 151 NRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEW 210

Query: 218 LPMSQSWGAIWKLDSGSVLHPPFSLRLTTLNSANTIVANNVIPIGWKPGNTYRSVVNF 269
           + M   WGA W +  G  L  PFS++LTTL++  T+ A +VIP  W P  TY S +NF
Sbjct: 211 ISMKHIWGANWCIVEGP-LKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNF 267

The following BLAST results are available for this feature:

BLAST of Sed0010886 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924767.1	5.1e-97	67.87	putative expansin-B2 [Cucurbita moschata]	[more]
XP_008437785.1	8.6e-97	68.91	PREDICTED: putative expansin-B2 [Cucumis melo]	[more]
XP_004133769.1	1.1e-96	68.54	putative expansin-B2 [Cucumis sativus] >KGN56356.1 hypothetical protein Csa_0116...	[more]
XP_023528384.1	7.3e-96	68.77	putative expansin-B2 [Cucurbita pepo subsp. pepo]	[more]
XP_022151532.1	3.1e-94	65.34	putative expansin-B2 isoform X2 [Momordica charantia]	[more]

BLAST of Sed0010886 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XT40	4.3e-75	53.79	Expansin-B15 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB15 PE=3 SV=2	[more]
Q5W6Z9	5.8e-72	57.76	Expansin-B18 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB18 PE=2 SV=1	[more]
Q9SHY6	4.9e-71	52.81	Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2	[more]
Q6H676	1.3e-66	55.98	Expansin-B11 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB11 PE=2 SV=1	[more]
Q6H677	1.4e-65	55.08	Putative expansin-B14 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB14 PE=3 SV...	[more]

BLAST of Sed0010886 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E9X0	2.4e-97	67.87	putative expansin-B2 OS=Cucurbita moschata OX=3662 GN=LOC111432169 PE=3 SV=1	[more]
A0A1S3AUH4	4.2e-97	68.91	putative expansin-B2 OS=Cucumis melo OX=3656 GN=LOC103483118 PE=3 SV=1	[more]
A0A0A0L8B4	5.5e-97	68.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117420 PE=3 SV=1	[more]
A0A6J1DDS1	1.5e-94	65.34	putative expansin-B2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019444 P...	[more]
A0A6J1IR92	1.9e-94	66.55	putative expansin-B2 OS=Cucurbita maxima OX=3661 GN=LOC111479279 PE=3 SV=1	[more]

BLAST of Sed0010886 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65680.1	3.5e-72	52.81	expansin B2	[more]
AT2G45110.1	2.7e-64	50.21	expansin B4	[more]
AT1G65681.1	3.3e-54	48.84	beta expansin 6	[more]
AT4G28250.1	2.1e-53	45.22	expansin B3	[more]
AT2G20750.1	1.3e-50	43.28	expansin B1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 152..168 score: 38.24 coord: 46..61 score: 41.72 coord: 250..264 score: 42.17 coord: 64..82 score: 38.16 coord: 210..224 score: 45.17
IPR005795	Major pollen allergen Lol pI	PRINTS	PR00829	LOLP1ALLERGN	coord: 189..204 score: 39.2 coord: 141..156 score: 42.05 coord: 173..188 score: 57.95 coord: 219..236 score: 43.43 coord: 119..134 score: 36.36
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 171..253 e-value: 2.4E-26 score: 91.5
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 182..264 score: 26.118221
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 31..165 e-value: 3.5E-31 score: 110.1
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 41..168
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 166..269 e-value: 1.7E-34 score: 119.7
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 170..264
None	No IPR available	PANTHER	PTHR31692	EXPANSIN-B3	coord: 10..269
None	No IPR available	PANTHER	PTHR31692:SF57	EXPANSIN-B2-RELATED	coord: 10..269
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 65..169 score: 21.052565

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010886.1	Sed0010886.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019953	sexual reproduction
cellular_component	GO:0005576	extracellular region