Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGCGGGCGGCAGTTGAAACAGTTGAAGAGTGAATTCCAACGCAAACCCTAAAAACCCTAAAAACCTCCATTGACGAGGTCCTCTCAGCTTCTTCGATCAAACATTTCTCTAATTTGTCCTCTTTCTCTTGTCATTCTTCACACTCTGTCGATTCTGTTGTTGCCCAGTGTTAATCCCTTCTTCTCTTCTCTGTCATTTTCTCTCTTCTGCGCTCTTTTATATATGGCGCCCCTTTATCGCCTACAATGGCCATTGCTCTGTCCTCGTCGTTTCCCAAGATCCCCACCACGTTCCTTGCATCTTTTCGCCAAACCCCATTTCGAGTTTCAGGCCCAGGATCGAGTTCGGGGGGCTTTGTTCCGGATTGGGGTTTTGTGCCCACTAGGTGTTCGATGAAATTCCCAACCTAAGCCACACCCAGGCGGTTAATGATTCTTCTTCTGCATTTTATGGTTTTCGAAAATTTAGATGTCGGTTCATTTATAGCAGGTACATCATTTTAGGTGAGTTTTCTTGTCTCCTTGTGTAGTTTTTGCTCGAGTTTTAGCATTTATTGTGCCATATAGATTGGATGCTTGCTGGGTCAATTCAATTGTGTTCTTGTGAAAATCTATGGGAAAGGAGTCCCCAAGGGTCAGGCTCGTCGGTAATGATATCGGCTTGTAGTCTTCAAGGTATGCTTATTTGGAGGTCCCAAGTTTGAAATCCACTAATGAAGTTAATTGTAAAATCTCTTGTTATTGATTAAAAAAAGCAAATTCAAAGGAAAGGGGTTTACGTGGGGGGTATGGAAATTGAATATTGATGCGCGCAAGTTCTGCTTATTGATCTGATTTTCATTAAGCTATACATATTCATTCTACATGAAGTTTAAAATTTTCTTTAGAGTAATTTGGCGTTTTCCTTTAATAAAGGATTAACGAATTTCAAGAGTGAGCAGCGTTGTTTTATAGGATTTTAGGTATGCATATGAATTTTAGCTTTTTGATATTTTTTTTTATCTAAAATGTAACAGAACTCTTTTACGTTTTCTATTGTAGGAAAACAAAACGGGTAATATGATAATCTTAATTCCTTTCAGTTTTATATTCATATTCAATGCCTAAACAAATTTCAAGACATGGAAATGAATGAGCTTGTATGATCTGTTACAAAAAGTATACCCTCTTCTTTGAGACCCAATTAGACCGAGTATTTTAAAAGCTCTCTACATGATCTAGTGCAGAGGAAATTATTCAGAGTCAATGGCTTCATCTCTGGAGGAGCTTCTTGCTAAAGAAGGTTTTAGAGGAAGAAGATCGTTTAGGAAGCCTAGTGGGCCCTTAAAAGCACACGCCACGAACACATCTAACGACCATTCACAAGAAACAAGAAACTCAGTTTCTGATTTGGGTGGTCAAGTTATGAGGCCTTTTCAACTCCGTTGTAGCTCTAGTACAGATTTTCGATCAAGAGGTGCAATCGAGAATTTTTTAGAAGTGGATAATTTCACAGGCAGAGAAGAGAGAGATAAAAGGCCGAGTAAAGAATACATTGACAGACTTGATGGAAAAAGGCATGGTGATGCGATAGAACAAAAGCCACGTTTTATAAATTTAGCCAAGAATAAACTACAAAGAGGAAATAATATTATTTCTGAGGAAGCAAATGAGAGCTTCAACGACATATATTCTAATGAAGTGCATATCCGACATGGAGTAAAAGGTGAAGCCAAAGAAGAAGTGAAAGAGAGGTGGTCTAGGAAGATCATAGATGTGGAGAAAAGGCAAGAAAGCAGCTTGAAGAAAAATCTATTTGGGCGTATGAATATTCATCATAGTAATAAGACAGCCGTAAATTTTCCAGAGAGATATTATGATAGATCCAACGACAGTACAACCAATTGGAAAAGCTTTAAAGATAGTCACAGTCAAACACAGGGCAATTTCGTAGATTCAGTTTCCATTCCTGCTTTGAATTTAGCTGCTGTCCAAGTTGTGGCTTCTATCGTTAATGGATACCTTAAATATTTTCTCAAAGATAAGGATTTCCGCTTGACTTTTCAGCATAATAGTTTCAGTTTACTGGATTTTATTGAAGTTGAAGGATGCTACAATTCAAAAGTTGTTGCCATCCTTAAACAATCAATTGACGAAGTAGAAAAAGCTGCCGAGGGATTGTCAACTGAAAAGGATTTAAAGAAAGCATTAATGCAGCTAAGTATGATAGCGGGTCTGAATACGAATGCTTTAAAGGATGGCTTTACATCTGGAATATCTAATTCAAAATTATCTGCTTGTGCCCATCTCTATCTTGGCATAGCATTCAAGATACAAAATAAAGAAATTAGTTCAGCTAAGCATATTTTACAAGTATTTTGTGAACTGCCTTTTCAGGCGCGGATCATATTGTTTCCAGAACTGTGGGATGATCTATTTCTTCCACATCTTTCACATATAAAATCCTGGTACGACAATGAAGCAGATTCATTAGTTGATACTCCAAACCAGTTAAGCAACCACAAAGTTCTTGATAAAGTGTATAACAACACCCTGGATTCTGGTACTTGCAAATTTGCAGTGTACTACAAGAATTGGCTTACAGGAATTGAAGCTCCTGCACCCTCCATTGTGATCCCTGCTGTATCTTTTAAGGGAGTTGGACCAGAAAGTCCTCTTGATAATTCTACCTCAACGACTCGTCCTAATGATTTTGTCTCGCCTAATCTGATGGTTAGTAAAAAACTATATGATGCTATGTTTGCCACTTCAAAGAATCCGGGAGCTCCATATGCTGAAAGTGAATGGGAATCAGAGAACCTTGGCAACTGTGCCAGAAGCTCTCATAGTTCCAATGTTTCAAAACATACCCAGATGTACTACTCAGACACAGTTAAAAACTTGGATCAAGATACGGATGAGGATTGTACAGGAAGCACAACCGAGAAGCCATCCCCTTCTGTAAGTATACCTTAAATCTGTTTCTTTCATATCAATGTCTTATATTGTTTTTTTTTTATATCCGTTACTGTCTGAGTGCGTGCGCGCACCTCGATTATTTTCATAGGACATACTGCCTGACTCTACAATATTTGGATGTCAAGGAAAATTGTAGGAAACTAATTCCTAGATAGCCATCATGGATTGAACCCTTCATATCTTAGTTCTCCAAGATCTTCTTGACCACTAGGCCACTCCATGGTTATCAATGTATTATATTGTTAAAAATATTATTTCATAACTAAAGTCATTGTGGTAATTCCTTAAGGAGCTTCCAGAAAGATTATAGGTAGTTTAGGATTTTAGAACTATGAAGTCTGCTTTCTGCAATGATCACTATCATGTTTCACAGCCTTTTTGGTTTGTTTGTTTGTTATTTTTTTTCCTTTCTTTTTTCGTTTTCTTTTCTGCGGACAGTAGTATTTTTCTAATGCTCATAAACCTTGGTAGGGGTAGGTCAAGTTTACAGGGGGATAAGTTTGCAGGTCTTACCTTTTCCTTATCCCTTTTGCATATCCAATCCACCATTACTTGACGTCATGATTTTTATTTTTCTAAGCTGTCAAATCAAAACATCTCATGGCAGTGAAAAAAACTGTACTACATTTCACATGGAAGGTGCAATCAATTAGCTTGTTTTTGCTATAGATTAAATAGCATATGTATTTTATGTGTTGATGTAGTAATTCATATACTAAACTGTCCCGATCTCGATGGTTGAGGCTTGAGATCTCTATGCTATGCTTTTTTGGAGATTCCAAGTTCGTAAACCACGAGTGAGCTTGATTATAATCTCTCTTGTTATCCCCAGGGACGAGCGCATATGCCCAATATATGTAGTTTTGGAGGGATATTGTTATAATGGAAGATGTAATCAAATGCTTAACATTTTTCTGCAGGAAAATTGTAAAGCTCAAGTATGGAAGATGTATAATGTTAATATTCTATCAGAAATGGAGGATAGTGACGAATTCAGCATTTCTATGACATGGAAAAAGAATGAGATTGACTTTAAAGCTCTGCATGGCTCAGCCACATAGAAATGGAGACAGCTATTATTAGTTAAAGTATGAATTCATTTTAGTTCAATAAATGTGGGGCCAAGTATGAAACCTTCAAACTTAAGGAATGTAATTACCATCTTATCAGTTATGCTCTATTCAAATGAGA
mRNA sequence
GGGCGGGCGGCAGTTGAAACAGTTGAAGAGTGAATTCCAACGCAAACCCTAAAAACCCTAAAAACCTCCATTGACGAGGTCCTCTCAGCTTCTTCGATCAAACATTTCTCTAATTTGTCCTCTTTCTCTTGTCATTCTTCACACTCTGTCGATTCTGTTGTTGCCCAGTGTTAATCCCTTCTTCTCTTCTCTGTCATTTTCTCTCTTCTGCGCTCTTTTATATATGGCGCCCCTTTATCGCCTACAATGGCCATTGCTCTGTCCTCGTCGTTTCCCAAGATCCCCACCACGTTCCTTGCATCTTTTCGCCAAACCCCATTTCGAGTTTCAGGCCCAGGATCGAGTTCGGGGGGCTTTGTTCCGGATTGGGGTTTTGTGCCCACTAGGTGTTCGATGAAATTCCCAACCTAAGCCACACCCAGGCGGTTAATGATTCTTCTTCTGCATTTTATGGTTTTCGAAAATTTAGATGTCGGTTCATTTATAGCAGGTACATCATTTTAGAGGAAATTATTCAGAGTCAATGGCTTCATCTCTGGAGGAGCTTCTTGCTAAAGAAGGTTTTAGAGGAAGAAGATCGTTTAGGAAGCCTAGTGGGCCCTTAAAAGCACACGCCACGAACACATCTAACGACCATTCACAAGAAACAAGAAACTCAGTTTCTGATTTGGGTGGTCAAGTTATGAGGCCTTTTCAACTCCGTTGTAGCTCTAGTACAGATTTTCGATCAAGAGGTGCAATCGAGAATTTTTTAGAAGTGGATAATTTCACAGGCAGAGAAGAGAGAGATAAAAGGCCGAGTAAAGAATACATTGACAGACTTGATGGAAAAAGGCATGGTGATGCGATAGAACAAAAGCCACGTTTTATAAATTTAGCCAAGAATAAACTACAAAGAGGAAATAATATTATTTCTGAGGAAGCAAATGAGAGCTTCAACGACATATATTCTAATGAAGTGCATATCCGACATGGAGTAAAAGGTGAAGCCAAAGAAGAAGTGAAAGAGAGGTGGTCTAGGAAGATCATAGATGTGGAGAAAAGGCAAGAAAGCAGCTTGAAGAAAAATCTATTTGGGCGTATGAATATTCATCATAGTAATAAGACAGCCGTAAATTTTCCAGAGAGATATTATGATAGATCCAACGACAGTACAACCAATTGGAAAAGCTTTAAAGATAGTCACAGTCAAACACAGGGCAATTTCGTAGATTCAGTTTCCATTCCTGCTTTGAATTTAGCTGCTGTCCAAGTTGTGGCTTCTATCGTTAATGGATACCTTAAATATTTTCTCAAAGATAAGGATTTCCGCTTGACTTTTCAGCATAATAGTTTCAGTTTACTGGATTTTATTGAAGTTGAAGGATGCTACAATTCAAAAGTTGTTGCCATCCTTAAACAATCAATTGACGAAGTAGAAAAAGCTGCCGAGGGATTGTCAACTGAAAAGGATTTAAAGAAAGCATTAATGCAGCTAAGTATGATAGCGGGTCTGAATACGAATGCTTTAAAGGATGGCTTTACATCTGGAATATCTAATTCAAAATTATCTGCTTGTGCCCATCTCTATCTTGGCATAGCATTCAAGATACAAAATAAAGAAATTAGTTCAGCTAAGCATATTTTACAAGTATTTTGTGAACTGCCTTTTCAGGCGCGGATCATATTGTTTCCAGAACTGTGGGATGATCTATTTCTTCCACATCTTTCACATATAAAATCCTGGTACGACAATGAAGCAGATTCATTAGTTGATACTCCAAACCAGTTAAGCAACCACAAAGTTCTTGATAAAGTGTATAACAACACCCTGGATTCTGGTACTTGCAAATTTGCAGTGTACTACAAGAATTGGCTTACAGGAATTGAAGCTCCTGCACCCTCCATTGTGATCCCTGCTGTATCTTTTAAGGGAGTTGGACCAGAAAGTCCTCTTGATAATTCTACCTCAACGACTCGTCCTAATGATTTTGTCTCGCCTAATCTGATGGTTAGTAAAAAACTATATGATGCTATGTTTGCCACTTCAAAGAATCCGGGAGCTCCATATGCTGAAAGTGAATGGGAATCAGAGAACCTTGGCAACTGTGCCAGAAGCTCTCATAGTTCCAATGTTTCAAAACATACCCAGATGTACTACTCAGACACAGTTAAAAACTTGGATCAAGATACGGATGAGGATTGTACAGGAAGCACAACCGAGAAGCCATCCCCTTCTGAAAATTGTAAAGCTCAAGTATGGAAGATGTATAATGTTAATATTCTATCAGAAATGGAGGATAGTGACGAATTCAGCATTTCTATGACATGGAAAAAGAATGAGATTGACTTTAAAGCTCTGCATGGCTCAGCCACATAGAAATGGAGACAGCTATTATTAGTTAAAGTATGAATTCATTTTAGTTCAATAAATGTGGGGCCAAGTATGAAACCTTCAAACTTAAGGAATGTAATTACCATCTTATCAGTTATGCTCTATTCAAATGAGA
Coding sequence (CDS)
ATGGCTTCATCTCTGGAGGAGCTTCTTGCTAAAGAAGGTTTTAGAGGAAGAAGATCGTTTAGGAAGCCTAGTGGGCCCTTAAAAGCACACGCCACGAACACATCTAACGACCATTCACAAGAAACAAGAAACTCAGTTTCTGATTTGGGTGGTCAAGTTATGAGGCCTTTTCAACTCCGTTGTAGCTCTAGTACAGATTTTCGATCAAGAGGTGCAATCGAGAATTTTTTAGAAGTGGATAATTTCACAGGCAGAGAAGAGAGAGATAAAAGGCCGAGTAAAGAATACATTGACAGACTTGATGGAAAAAGGCATGGTGATGCGATAGAACAAAAGCCACGTTTTATAAATTTAGCCAAGAATAAACTACAAAGAGGAAATAATATTATTTCTGAGGAAGCAAATGAGAGCTTCAACGACATATATTCTAATGAAGTGCATATCCGACATGGAGTAAAAGGTGAAGCCAAAGAAGAAGTGAAAGAGAGGTGGTCTAGGAAGATCATAGATGTGGAGAAAAGGCAAGAAAGCAGCTTGAAGAAAAATCTATTTGGGCGTATGAATATTCATCATAGTAATAAGACAGCCGTAAATTTTCCAGAGAGATATTATGATAGATCCAACGACAGTACAACCAATTGGAAAAGCTTTAAAGATAGTCACAGTCAAACACAGGGCAATTTCGTAGATTCAGTTTCCATTCCTGCTTTGAATTTAGCTGCTGTCCAAGTTGTGGCTTCTATCGTTAATGGATACCTTAAATATTTTCTCAAAGATAAGGATTTCCGCTTGACTTTTCAGCATAATAGTTTCAGTTTACTGGATTTTATTGAAGTTGAAGGATGCTACAATTCAAAAGTTGTTGCCATCCTTAAACAATCAATTGACGAAGTAGAAAAAGCTGCCGAGGGATTGTCAACTGAAAAGGATTTAAAGAAAGCATTAATGCAGCTAAGTATGATAGCGGGTCTGAATACGAATGCTTTAAAGGATGGCTTTACATCTGGAATATCTAATTCAAAATTATCTGCTTGTGCCCATCTCTATCTTGGCATAGCATTCAAGATACAAAATAAAGAAATTAGTTCAGCTAAGCATATTTTACAAGTATTTTGTGAACTGCCTTTTCAGGCGCGGATCATATTGTTTCCAGAACTGTGGGATGATCTATTTCTTCCACATCTTTCACATATAAAATCCTGGTACGACAATGAAGCAGATTCATTAGTTGATACTCCAAACCAGTTAAGCAACCACAAAGTTCTTGATAAAGTGTATAACAACACCCTGGATTCTGGTACTTGCAAATTTGCAGTGTACTACAAGAATTGGCTTACAGGAATTGAAGCTCCTGCACCCTCCATTGTGATCCCTGCTGTATCTTTTAAGGGAGTTGGACCAGAAAGTCCTCTTGATAATTCTACCTCAACGACTCGTCCTAATGATTTTGTCTCGCCTAATCTGATGGTTAGTAAAAAACTATATGATGCTATGTTTGCCACTTCAAAGAATCCGGGAGCTCCATATGCTGAAAGTGAATGGGAATCAGAGAACCTTGGCAACTGTGCCAGAAGCTCTCATAGTTCCAATGTTTCAAAACATACCCAGATGTACTACTCAGACACAGTTAAAAACTTGGATCAAGATACGGATGAGGATTGTACAGGAAGCACAACCGAGAAGCCATCCCCTTCTGAAAATTGTAAAGCTCAAGTATGGAAGATGTATAATGTTAATATTCTATCAGAAATGGAGGATAGTGACGAATTCAGCATTTCTATGACATGGAAAAAGAATGAGATTGACTTTAAAGCTCTGCATGGCTCAGCCACATAG
Protein sequence
MASSLEELLAKEGFRGRRSFRKPSGPLKAHATNTSNDHSQETRNSVSDLGGQVMRPFQLRCSSSTDFRSRGAIENFLEVDNFTGREERDKRPSKEYIDRLDGKRHGDAIEQKPRFINLAKNKLQRGNNIISEEANESFNDIYSNEVHIRHGVKGEAKEEVKERWSRKIIDVEKRQESSLKKNLFGRMNIHHSNKTAVNFPERYYDRSNDSTTNWKSFKDSHSQTQGNFVDSVSIPALNLAAVQVVASIVNGYLKYFLKDKDFRLTFQHNSFSLLDFIEVEGCYNSKVVAILKQSIDEVEKAAEGLSTEKDLKKALMQLSMIAGLNTNALKDGFTSGISNSKLSACAHLYLGIAFKIQNKEISSAKHILQVFCELPFQARIILFPELWDDLFLPHLSHIKSWYDNEADSLVDTPNQLSNHKVLDKVYNNTLDSGTCKFAVYYKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNSTSTTRPNDFVSPNLMVSKKLYDAMFATSKNPGAPYAESEWESENLGNCARSSHSSNVSKHTQMYYSDTVKNLDQDTDEDCTGSTTEKPSPSENCKAQVWKMYNVNILSEMEDSDEFSISMTWKKNEIDFKALHGSAT
Homology
BLAST of Sed0010857 vs. NCBI nr
Match:
XP_038878502.1 (putative E3 ubiquitin-protein ligase LIN isoform X2 [Benincasa hispida])
HSP 1 Score: 828.2 bits (2138), Expect = 4.7e-236
Identity = 431/612 (70.42%), Postives = 497/612 (81.21%), Query Frame = 0
Query: 1 MASSLEELLAKEGFRGRRSFRKPSGPLKAHATNTSNDHSQETRNSVSDLGGQ---VMRPF 60
MASSLEELLA+EGFRG+R RK GP K+HAT+TSND SQE RN SDLGGQ M+P
Sbjct: 1 MASSLEELLAEEGFRGKRRLRKSKGPFKSHATSTSNDDSQEIRNLDSDLGGQGRTTMKPS 60
Query: 61 QLRCSSSTDFRSRGAIENFLEVDNFTGREERDKRPSKEYIDRLDGKRHGDAIEQKPRFIN 120
LR SSS DFRSRG ++N E NFT RE+RD++ +K+Y++RLDGKRH IEQKP +N
Sbjct: 61 LLRHSSSGDFRSRGIMKNLAEGGNFTYREKRDEKSNKQYVERLDGKRHDGVIEQKPCLVN 120
Query: 121 LAKNKLQRGNNIISEEANESFNDIYSNEVHIRHGVK--GEAKEEVKERWSRKIIDVEKRQ 180
LAK+K QRG+ ISEE NE+ IYSNEVH++HGVK + KE+ KERWS K IDVEKRQ
Sbjct: 121 LAKDKPQRGDRYISEEENENCKGIYSNEVHVQHGVKCVAKEKEQYKERWSVKNIDVEKRQ 180
Query: 181 ESSLKKNLFGRMNIHHSNKTAVNFPERYYDRSNDSTTNWKSFKDSHSQTQGNFVDSVSIP 240
+SLKKNLFGR+N HH NKTAV FPER YD++NDST+ W++F+D HSQT FV+SVSIP
Sbjct: 181 RNSLKKNLFGRINFHHCNKTAVYFPERSYDKTNDSTSIWRNFEDDHSQTHDTFVNSVSIP 240
Query: 241 ALNLAAVQVVASIVNGYLKYFLKDKDFRLTFQHNSFSLLDFIEVEGCYNSKVVAILKQSI 300
AL++ AV+ V SI+NG+LKYFLKDKDFRL + NSF+ L+ VE C +SKVVA L+Q+I
Sbjct: 241 ALDVVAVRAVVSIINGHLKYFLKDKDFRLMLRKNSFNPLNVNGVEKCNSSKVVANLEQAI 300
Query: 301 DEVEKAAEGLSTEKDLKKALMQLSMIAGLNTNALKDGFTSGISNSKLSACAHLYLGIAFK 360
D VEKA EGLSTEKDLKKAL+QLSMIAGLNTN LKDGFT G SNSKLSACAHLYLGI FK
Sbjct: 301 DVVEKAVEGLSTEKDLKKALLQLSMIAGLNTNGLKDGFTFGTSNSKLSACAHLYLGIIFK 360
Query: 361 IQNKEISSAKHILQVFCELPFQARIILFPELWDDLFLPHLSHIKSWYDNEADSLVDTPNQ 420
IQNKE S+AKHILQVFC LPFQARI+LFPELWD+LFLPHL HI SWYD+EADSLV+TP+Q
Sbjct: 361 IQNKENSAAKHILQVFCNLPFQARIVLFPELWDELFLPHLLHINSWYDHEADSLVNTPSQ 420
Query: 421 LSNHKVLDKVYNNTLDSGTCKFAVYYKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNST 480
N K+LD VY TLDSGTCKFAVYYK+W++GIEA PSIV+PA SF+G E PL+NST
Sbjct: 421 SRNQKLLDTVYYETLDSGTCKFAVYYKDWISGIEASEPSIVVPAASFEGFHQEIPLNNST 480
Query: 481 STTRPNDFVSPNLMVSKKLYDAMFATSKNPGAPYAESEWESENLGNCARSSHSSNVSKHT 540
+TT P+DFVSPNLMVSKKLY+AMFATSKN GAP ESEWE E L NC RSS SS VSKHT
Sbjct: 481 ATTLPSDFVSPNLMVSKKLYEAMFATSKNQGAPDTESEWELEKLDNCVRSSTSSTVSKHT 540
Query: 541 QMYYSDTVKNLDQDTDEDCTGSTTEKPSPSENCKAQVWKMYNVNILSEMEDSDEFSISMT 600
Q+YYSDTVK+ DQDTDED TGSTTE S ENCKAQ WK YN+N+LSEM+ SD+ S T
Sbjct: 541 QIYYSDTVKDFDQDTDEDSTGSTTENTSSFENCKAQEWKTYNINVLSEMDGSDDSCSSTT 600
Query: 601 WKKNEIDFKALH 608
K NEIDF+ LH
Sbjct: 601 CKNNEIDFEVLH 612
BLAST of Sed0010857 vs. NCBI nr
Match:
XP_038878500.1 (putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Benincasa hispida] >XP_038878501.1 putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Benincasa hispida])
HSP 1 Score: 828.2 bits (2138), Expect = 4.7e-236
Identity = 431/612 (70.42%), Postives = 497/612 (81.21%), Query Frame = 0
Query: 1 MASSLEELLAKEGFRGRRSFRKPSGPLKAHATNTSNDHSQETRNSVSDLGGQ---VMRPF 60
MASSLEELLA+EGFRG+R RK GP K+HAT+TSND SQE RN SDLGGQ M+P
Sbjct: 1 MASSLEELLAEEGFRGKRRLRKSKGPFKSHATSTSNDDSQEIRNLDSDLGGQGRTTMKPS 60
Query: 61 QLRCSSSTDFRSRGAIENFLEVDNFTGREERDKRPSKEYIDRLDGKRHGDAIEQKPRFIN 120
LR SSS DFRSRG ++N E NFT RE+RD++ +K+Y++RLDGKRH IEQKP +N
Sbjct: 61 LLRHSSSGDFRSRGIMKNLAEGGNFTYREKRDEKSNKQYVERLDGKRHDGVIEQKPCLVN 120
Query: 121 LAKNKLQRGNNIISEEANESFNDIYSNEVHIRHGVK--GEAKEEVKERWSRKIIDVEKRQ 180
LAK+K QRG+ ISEE NE+ IYSNEVH++HGVK + KE+ KERWS K IDVEKRQ
Sbjct: 121 LAKDKPQRGDRYISEEENENCKGIYSNEVHVQHGVKCVAKEKEQYKERWSVKNIDVEKRQ 180
Query: 181 ESSLKKNLFGRMNIHHSNKTAVNFPERYYDRSNDSTTNWKSFKDSHSQTQGNFVDSVSIP 240
+SLKKNLFGR+N HH NKTAV FPER YD++NDST+ W++F+D HSQT FV+SVSIP
Sbjct: 181 RNSLKKNLFGRINFHHCNKTAVYFPERSYDKTNDSTSIWRNFEDDHSQTHDTFVNSVSIP 240
Query: 241 ALNLAAVQVVASIVNGYLKYFLKDKDFRLTFQHNSFSLLDFIEVEGCYNSKVVAILKQSI 300
AL++ AV+ V SI+NG+LKYFLKDKDFRL + NSF+ L+ VE C +SKVVA L+Q+I
Sbjct: 241 ALDVVAVRAVVSIINGHLKYFLKDKDFRLMLRKNSFNPLNVNGVEKCNSSKVVANLEQAI 300
Query: 301 DEVEKAAEGLSTEKDLKKALMQLSMIAGLNTNALKDGFTSGISNSKLSACAHLYLGIAFK 360
D VEKA EGLSTEKDLKKAL+QLSMIAGLNTN LKDGFT G SNSKLSACAHLYLGI FK
Sbjct: 301 DVVEKAVEGLSTEKDLKKALLQLSMIAGLNTNGLKDGFTFGTSNSKLSACAHLYLGIIFK 360
Query: 361 IQNKEISSAKHILQVFCELPFQARIILFPELWDDLFLPHLSHIKSWYDNEADSLVDTPNQ 420
IQNKE S+AKHILQVFC LPFQARI+LFPELWD+LFLPHL HI SWYD+EADSLV+TP+Q
Sbjct: 361 IQNKENSAAKHILQVFCNLPFQARIVLFPELWDELFLPHLLHINSWYDHEADSLVNTPSQ 420
Query: 421 LSNHKVLDKVYNNTLDSGTCKFAVYYKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNST 480
N K+LD VY TLDSGTCKFAVYYK+W++GIEA PSIV+PA SF+G E PL+NST
Sbjct: 421 SRNQKLLDTVYYETLDSGTCKFAVYYKDWISGIEASEPSIVVPAASFEGFHQEIPLNNST 480
Query: 481 STTRPNDFVSPNLMVSKKLYDAMFATSKNPGAPYAESEWESENLGNCARSSHSSNVSKHT 540
+TT P+DFVSPNLMVSKKLY+AMFATSKN GAP ESEWE E L NC RSS SS VSKHT
Sbjct: 481 ATTLPSDFVSPNLMVSKKLYEAMFATSKNQGAPDTESEWELEKLDNCVRSSTSSTVSKHT 540
Query: 541 QMYYSDTVKNLDQDTDEDCTGSTTEKPSPSENCKAQVWKMYNVNILSEMEDSDEFSISMT 600
Q+YYSDTVK+ DQDTDED TGSTTE S ENCKAQ WK YN+N+LSEM+ SD+ S T
Sbjct: 541 QIYYSDTVKDFDQDTDEDSTGSTTENTSSFENCKAQEWKTYNINVLSEMDGSDDSCSSTT 600
Query: 601 WKKNEIDFKALH 608
K NEIDF+ LH
Sbjct: 601 CKNNEIDFEVLH 612
BLAST of Sed0010857 vs. NCBI nr
Match:
XP_022154073.1 (putative E3 ubiquitin-protein ligase LIN-2 isoform X2 [Momordica charantia])
HSP 1 Score: 822.0 bits (2122), Expect = 3.4e-234
Identity = 438/612 (71.57%), Postives = 504/612 (82.35%), Query Frame = 0
Query: 1 MASSLEELLAKEGFRGRRSFRKPSGPLKAHATNTSNDHSQETRNSVSDLGGQV---MRPF 60
MASSLEELLA+EGFRGRR RK G +K++AT TSNDHSQET NS SDL GQ+ MRP
Sbjct: 1 MASSLEELLAEEGFRGRRPMRKSKGSIKSYATITSNDHSQETGNSDSDLDGQLRNAMRPS 60
Query: 61 QLRCSSSTDFRSRGAIENFLEVDNFTGREERDKRPSKEYIDRLDGKRHGDAIEQKPRFIN 120
R SSS DFRSRG I+N E DNFT RE+ DK+ S+EY++RL GK HGD IE+KP IN
Sbjct: 61 LFRRSSSGDFRSRGIIKNLTEGDNFTNREKIDKKSSREYVERLYGKGHGDVIERKPCLIN 120
Query: 121 LAKNKLQRGNNIISEEANESFNDIYSNEVHIRHGVKGEA--KEEVKERWSRKIIDVEKRQ 180
+++K +RG+NII EE +ESF DIYSNEVHIRHGVKGEA KE+ KERWS IDVEKRQ
Sbjct: 121 SSRDKPKRGDNIILEEESESFKDIYSNEVHIRHGVKGEAREKEQQKERWSGNNIDVEKRQ 180
Query: 181 ESSLKKNLFGRMNIHHSNKTAVNFPERYYDRSNDSTTNWKSFKDSHSQTQGNFVDSVSIP 240
+SLKKNLF +N HHS K AV PER YD+S S N KSF+ + S+ Q + V+SVSIP
Sbjct: 181 GNSLKKNLFAGINFHHSCKAAVKLPERSYDKS-VSACNRKSFEHNQSRMQDSNVESVSIP 240
Query: 241 ALNLAAVQVVASIVNGYLKYFLKDKDFRLTFQHNSFSLLDFIEVEGCYNSKVVAILKQSI 300
L++ AV+ V SI+NGYLK+FLKDKDFRLT +HNS +LL+FI V G SKVVA L+Q+I
Sbjct: 241 TLDVVAVRAVVSIINGYLKHFLKDKDFRLTLRHNSSTLLNFIGVGGRNTSKVVANLEQAI 300
Query: 301 DEVEKAAEGLSTEKDLKKALMQLSMIAGLNTNALKDGFTSGISNSKLSACAHLYLGIAFK 360
D VEKAAEGLSTEKDLKKAL+ LSM+ GL+T+ALKDGF GISN+KLSACAHLYL I FK
Sbjct: 301 DVVEKAAEGLSTEKDLKKALLLLSMMTGLSTDALKDGFKYGISNTKLSACAHLYLSIIFK 360
Query: 361 IQNKEISSAKHILQVFCELPFQARIILFPELWDDLFLPHLSHIKSWYDNEADSLVDTPNQ 420
IQ KE SSAKHILQVFC+LPFQARIILFPELWDDLFLPHL++IKSWYD+EAD LVDTP+Q
Sbjct: 361 IQKKENSSAKHILQVFCDLPFQARIILFPELWDDLFLPHLTNIKSWYDHEADKLVDTPSQ 420
Query: 421 LSNHKVLDKVYNNTLDSGTCKFAVYYKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNST 480
SN K+LDKV+N TLDSGT KFAVYYK+WLTGIEAPAPSI +PA+SF+GV ESP +NST
Sbjct: 421 SSNQKLLDKVFNETLDSGTRKFAVYYKDWLTGIEAPAPSIAVPALSFEGVNQESP-NNST 480
Query: 481 STTRPNDFVSPNLMVSKKLYDAMFATSKNPGAPYAESEWESENLGNCARSSHSSNVSKHT 540
+ PNDFVSP+LMVSKKLYDAMFAT+KNPGAP ESEWESEN NC RSS+SSNVSKHT
Sbjct: 481 AKKLPNDFVSPHLMVSKKLYDAMFATTKNPGAPDTESEWESENPENCVRSSNSSNVSKHT 540
Query: 541 QMYYSDTVKNLDQDTDEDCTGSTTEKPSPSENCKAQVWKMYNVNILSEMEDSDEFSISMT 600
Q+YYSDTVK++D DTDED TGSTT+ S ENCKAQ WKMYNVNIL EM+DSDEF S+T
Sbjct: 541 QVYYSDTVKDIDHDTDEDSTGSTTDNTSSFENCKAQKWKMYNVNILLEMDDSDEFCSSVT 600
Query: 601 WKKNEIDFKALH 608
WKKN+IDF+ LH
Sbjct: 601 WKKNDIDFEVLH 610
BLAST of Sed0010857 vs. NCBI nr
Match:
XP_022154072.1 (putative E3 ubiquitin-protein ligase LIN-2 isoform X1 [Momordica charantia])
HSP 1 Score: 822.0 bits (2122), Expect = 3.4e-234
Identity = 438/612 (71.57%), Postives = 504/612 (82.35%), Query Frame = 0
Query: 1 MASSLEELLAKEGFRGRRSFRKPSGPLKAHATNTSNDHSQETRNSVSDLGGQV---MRPF 60
MASSLEELLA+EGFRGRR RK G +K++AT TSNDHSQET NS SDL GQ+ MRP
Sbjct: 102 MASSLEELLAEEGFRGRRPMRKSKGSIKSYATITSNDHSQETGNSDSDLDGQLRNAMRPS 161
Query: 61 QLRCSSSTDFRSRGAIENFLEVDNFTGREERDKRPSKEYIDRLDGKRHGDAIEQKPRFIN 120
R SSS DFRSRG I+N E DNFT RE+ DK+ S+EY++RL GK HGD IE+KP IN
Sbjct: 162 LFRRSSSGDFRSRGIIKNLTEGDNFTNREKIDKKSSREYVERLYGKGHGDVIERKPCLIN 221
Query: 121 LAKNKLQRGNNIISEEANESFNDIYSNEVHIRHGVKGEA--KEEVKERWSRKIIDVEKRQ 180
+++K +RG+NII EE +ESF DIYSNEVHIRHGVKGEA KE+ KERWS IDVEKRQ
Sbjct: 222 SSRDKPKRGDNIILEEESESFKDIYSNEVHIRHGVKGEAREKEQQKERWSGNNIDVEKRQ 281
Query: 181 ESSLKKNLFGRMNIHHSNKTAVNFPERYYDRSNDSTTNWKSFKDSHSQTQGNFVDSVSIP 240
+SLKKNLF +N HHS K AV PER YD+S S N KSF+ + S+ Q + V+SVSIP
Sbjct: 282 GNSLKKNLFAGINFHHSCKAAVKLPERSYDKS-VSACNRKSFEHNQSRMQDSNVESVSIP 341
Query: 241 ALNLAAVQVVASIVNGYLKYFLKDKDFRLTFQHNSFSLLDFIEVEGCYNSKVVAILKQSI 300
L++ AV+ V SI+NGYLK+FLKDKDFRLT +HNS +LL+FI V G SKVVA L+Q+I
Sbjct: 342 TLDVVAVRAVVSIINGYLKHFLKDKDFRLTLRHNSSTLLNFIGVGGRNTSKVVANLEQAI 401
Query: 301 DEVEKAAEGLSTEKDLKKALMQLSMIAGLNTNALKDGFTSGISNSKLSACAHLYLGIAFK 360
D VEKAAEGLSTEKDLKKAL+ LSM+ GL+T+ALKDGF GISN+KLSACAHLYL I FK
Sbjct: 402 DVVEKAAEGLSTEKDLKKALLLLSMMTGLSTDALKDGFKYGISNTKLSACAHLYLSIIFK 461
Query: 361 IQNKEISSAKHILQVFCELPFQARIILFPELWDDLFLPHLSHIKSWYDNEADSLVDTPNQ 420
IQ KE SSAKHILQVFC+LPFQARIILFPELWDDLFLPHL++IKSWYD+EAD LVDTP+Q
Sbjct: 462 IQKKENSSAKHILQVFCDLPFQARIILFPELWDDLFLPHLTNIKSWYDHEADKLVDTPSQ 521
Query: 421 LSNHKVLDKVYNNTLDSGTCKFAVYYKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNST 480
SN K+LDKV+N TLDSGT KFAVYYK+WLTGIEAPAPSI +PA+SF+GV ESP +NST
Sbjct: 522 SSNQKLLDKVFNETLDSGTRKFAVYYKDWLTGIEAPAPSIAVPALSFEGVNQESP-NNST 581
Query: 481 STTRPNDFVSPNLMVSKKLYDAMFATSKNPGAPYAESEWESENLGNCARSSHSSNVSKHT 540
+ PNDFVSP+LMVSKKLYDAMFAT+KNPGAP ESEWESEN NC RSS+SSNVSKHT
Sbjct: 582 AKKLPNDFVSPHLMVSKKLYDAMFATTKNPGAPDTESEWESENPENCVRSSNSSNVSKHT 641
Query: 541 QMYYSDTVKNLDQDTDEDCTGSTTEKPSPSENCKAQVWKMYNVNILSEMEDSDEFSISMT 600
Q+YYSDTVK++D DTDED TGSTT+ S ENCKAQ WKMYNVNIL EM+DSDEF S+T
Sbjct: 642 QVYYSDTVKDIDHDTDEDSTGSTTDNTSSFENCKAQKWKMYNVNILLEMDDSDEFCSSVT 701
Query: 601 WKKNEIDFKALH 608
WKKN+IDF+ LH
Sbjct: 702 WKKNDIDFEVLH 711
BLAST of Sed0010857 vs. NCBI nr
Match:
XP_004149032.2 (putative E3 ubiquitin-protein ligase LIN isoform X1 [Cucumis sativus] >XP_031737245.1 putative E3 ubiquitin-protein ligase LIN isoform X1 [Cucumis sativus])
HSP 1 Score: 813.9 bits (2101), Expect = 9.2e-232
Identity = 439/650 (67.54%), Postives = 496/650 (76.31%), Query Frame = 0
Query: 1 MASSLEELLAKEGFRGRRSFRKPSGPLKAHATNTSNDHSQETRNSVSDLGGQV---MRPF 60
MASSLEELLA+EGFRGRR RK GP +HAT+TSN+ SQ+ RN SDLGGQV M+P
Sbjct: 1 MASSLEELLAEEGFRGRRPIRKSKGPFNSHATSTSNNDSQDKRNLDSDLGGQVRTTMKPS 60
Query: 61 QLRCSSSTDFRSRGAIENFLEVDNFTGREERDKRPSKEYIDRLDGKRHGDAIEQKPRFIN 120
LR SS+ DF SRG +N E NFT RE+RDK+ SK+Y++R DGKRH + EQKP +N
Sbjct: 61 LLRHSSNGDFHSRGMTKNLTEGGNFTYREKRDKKSSKQYVERFDGKRHVNVTEQKPCLVN 120
Query: 121 LAKNKLQRGNNIISEEANESFNDIYSNEVHIRHGVKGEAKEE--VKERWSRKIIDVEKRQ 180
LAK+K QRG+ ISEE NE+F IYSNEVH+R GVK AKE+ KERWS KIIDVEKRQ
Sbjct: 121 LAKDKTQRGHRYISEEENENFRGIYSNEVHVRRGVKCAAKEKELYKERWSGKIIDVEKRQ 180
Query: 181 ESSLKKNLFGRMNIHHSNKTAVNFPERYYDRS--NDSTTNWK------------------ 240
+SLKKNLFGR+N HH N+TAV PE YD+S N ST NWK
Sbjct: 181 RNSLKKNLFGRINFHHCNETAVYLPESSYDKSKTNASTRNWKNFEDDHSQTHDTFEDDRS 240
Query: 241 ---------------SFKDSHSQTQGNFVDSVSIPALNLAAVQVVASIVNGYLKYFLKDK 300
+F+D HSQTQ FVDS S+PAL+ AVQ V SI+NG+LKYFLKDK
Sbjct: 241 QAHDTFEDDRSQTHDTFEDDHSQTQDTFVDSGSLPALDEVAVQAVVSIINGHLKYFLKDK 300
Query: 301 DFRLTFQHNSFSLLDFIEVEGCYNSKVVAILKQSIDEVEKAAEGLSTEKDLKKALMQLSM 360
DFRL + NSF+ L+FI VE C +SKVVA L+Q+ID VEKAAEGLSTEK+LKKAL+QLSM
Sbjct: 301 DFRLMLRQNSFNPLNFIGVEECNSSKVVANLEQAIDVVEKAAEGLSTEKNLKKALLQLSM 360
Query: 361 IAGLNTNALKDGFTSGISNSKLSACAHLYLGIAFKIQNKEISSAKHILQVFCELPFQARI 420
IAGLNTNALKDGFT GISNSKLSACAHLYLGI FKIQNK+ SSAKHILQVFC LPFQAR
Sbjct: 361 IAGLNTNALKDGFTFGISNSKLSACAHLYLGIIFKIQNKKNSSAKHILQVFCNLPFQARN 420
Query: 421 ILFPELWDDLFLPHLSHIKSWYDNEADSLVDTPNQLSNHKVLDKVYNNTLDSGTCKFAVY 480
LFPELWDDLFLPHL HIKSWYD EADSLV+ P Q K+LDKVYN TLDS TCK+AVY
Sbjct: 421 GLFPELWDDLFLPHLLHIKSWYDYEADSLVNAPKQSRKQKLLDKVYNETLDSSTCKYAVY 480
Query: 481 YKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNSTSTTRPNDFVSPNLMVSKKLYDAMFA 540
YK+WLTGIEAP PSIV+PAVSF+GV ESP++NS++TT NDFVSPNLMVSKKLYDAMFA
Sbjct: 481 YKDWLTGIEAPEPSIVVPAVSFEGVDQESPVNNSSATTLCNDFVSPNLMVSKKLYDAMFA 540
Query: 541 TSKNPGAPYAESEWESENLGNCARSSHSSNVSKHTQMYYSDTVKNLDQDTDEDCTGSTTE 600
TSKN GAP+ E EWE EN NC RSS+SSNVSKHTQ+YYSDT K+LDQDTDED TGSTTE
Sbjct: 541 TSKNQGAPHTEIEWELENRDNCIRSSNSSNVSKHTQIYYSDTTKDLDQDTDEDSTGSTTE 600
Query: 601 KPSPSENCKAQVWKMYNVNILSEMEDSDEFSISMTWKKNEIDFKALHGSA 611
S ENCK Q WK YN+N LSEM+ SDE S T K NEIDF+ LH +
Sbjct: 601 NTSSFENCKGQEWKTYNINALSEMDGSDEICSSTTCKNNEIDFEVLHAQS 650
BLAST of Sed0010857 vs. ExPASy Swiss-Prot
Match:
D1FP53 (Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula OX=3880 GN=LIN PE=2 SV=1)
HSP 1 Score: 82.0 bits (201), Expect = 2.5e-14
Identity = 93/337 (27.60%), Postives = 148/337 (43.92%), Query Frame = 0
Query: 287 VVAILKQSIDEVEKAAEGLSTEKDLKK---ALMQLSMIAGLNTNALKDGFTSGISNSKLS 346
V+A L I+ +E+A + E L + A L + A LN T+G+ NS LS
Sbjct: 67 VLANLDWGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKQK----TAGVPNSYLS 126
Query: 347 ACAHLYLGIAFKIQNKEISSAKHILQVFCELPFQARIILFPELWDDLFLPHLSHIKSWYD 406
A AHL L +K++N S H L++F PF +RI PELW +LFLPH+S I WY
Sbjct: 127 AWAHLNLSYLWKLRNNIKSCIYHSLEMFIVDPFFSRIDFAPELWKNLFLPHMSSIVGWYS 186
Query: 407 NEA-------------------------DSLVDT--PNQLSNHKVLDKVYNNTLDSGTCK 466
E +SLV + PNQL + L+++Y +LD T
Sbjct: 187 EERHKLMMEVLPESTDFSYTADFDKVFNESLVFSMRPNQLEKLQKLEQLYGESLDENTRL 246
Query: 467 FAVYYKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNSTSTTRPNDFVSPNLMVSKKLYD 526
+A YY + + ++ + V+P + P +PL + S + P DFV ++ K
Sbjct: 247 YAKYYNDCMNP-DSTSSKKVVPMLPI-AEPPMTPL-HELSRSVP-DFVKFGPILPKSSGF 306
Query: 527 AMFATSKNPGAPYAESEWESENLGNCARSSHSSNVSKHTQMYYSDTVKNLDQDTDEDCTG 585
+M N G +E EN+ + S+HS ++ ++ D D +
Sbjct: 307 SMTTRRSNDGL----NETTRENI--ASNSNHSKGEQSSLWAAKESIIEEIEDDLDSEHYD 366
BLAST of Sed0010857 vs. ExPASy Swiss-Prot
Match:
C6L7U1 (Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus OX=34305 GN=CERBERUS PE=2 SV=2)
HSP 1 Score: 77.0 bits (188), Expect = 8.1e-13
Identity = 74/248 (29.84%), Postives = 112/248 (45.16%), Query Frame = 0
Query: 287 VVAILKQSIDEVEKAAEGLSTEKDLKK---ALMQLSMIAGLNTNALKDGFTSGISNSKLS 346
V+A L I+ +E+A + E L + A L + A LN +G+ NS LS
Sbjct: 67 VLANLDWGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKQK----IAGVPNSYLS 126
Query: 347 ACAHLYLGIAFKIQNKEISSAKHILQVFCELPFQARIILFPELWDDLFLPHLSHIKSWYD 406
A AHL L +K++N + H L++F PF RI PELW LFLPH+S I WY
Sbjct: 127 AWAHLNLSYLWKLRNNVQNCISHALEMFIVDPFFTRIDFAPELWKSLFLPHMSSIVGWYS 186
Query: 407 NEA-------------------------DSLVDT--PNQLSNHKVLDKVYNNTLDSGTCK 466
E +SLV T P+QL + L+++Y +LD T
Sbjct: 187 EERHRLMMEVIPDSADLSFTADFEQFFNESLVLTMRPHQLEKLQKLEQLYGESLDENTKL 246
Query: 467 FAVYYKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNSTSTTRPNDFVSPNLMVSKKLYD 505
+A YY + + ++ + +P + P +PL + S T P DFV ++ K
Sbjct: 247 YAKYYNDCMNS-DSSSSKKAVPMLPI-AEPPMTPL-HELSRTIP-DFVKFGPILPKSAGF 306
BLAST of Sed0010857 vs. ExPASy Swiss-Prot
Match:
D1FP57 (Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus OX=34305 GN=LIN PE=1 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 8.1e-13
Identity = 74/248 (29.84%), Postives = 112/248 (45.16%), Query Frame = 0
Query: 287 VVAILKQSIDEVEKAAEGLSTEKDLKK---ALMQLSMIAGLNTNALKDGFTSGISNSKLS 346
V+A L I+ +E+A + E L + A L + A LN +G+ NS LS
Sbjct: 67 VLANLDWGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKQK----IAGVPNSYLS 126
Query: 347 ACAHLYLGIAFKIQNKEISSAKHILQVFCELPFQARIILFPELWDDLFLPHLSHIKSWYD 406
A AHL L +K++N + H L++F PF RI PELW LFLPH+S I WY
Sbjct: 127 AWAHLNLSYLWKLRNNVQNCISHALEMFIVDPFFTRIDFAPELWKSLFLPHMSSIVGWYS 186
Query: 407 NEA-------------------------DSLVDT--PNQLSNHKVLDKVYNNTLDSGTCK 466
E +SLV T P+QL + L+++Y +LD T
Sbjct: 187 EERHRLMMEVIPDSADLSFTADFEQFFNESLVLTMRPHQLEKLQKLEQLYGESLDENTKL 246
Query: 467 FAVYYKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNSTSTTRPNDFVSPNLMVSKKLYD 505
+A YY + + ++ + +P + P +PL + S T P DFV ++ K
Sbjct: 247 YAKYYNDCMNS-DSSSSKKAVPMLPI-AEPPMTPL-HELSRTIP-DFVKFGPILPKSAGF 306
BLAST of Sed0010857 vs. ExPASy TrEMBL
Match:
A0A6J1DKP1 (putative E3 ubiquitin-protein ligase LIN-2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021416 PE=4 SV=1)
HSP 1 Score: 822.0 bits (2122), Expect = 1.6e-234
Identity = 438/612 (71.57%), Postives = 504/612 (82.35%), Query Frame = 0
Query: 1 MASSLEELLAKEGFRGRRSFRKPSGPLKAHATNTSNDHSQETRNSVSDLGGQV---MRPF 60
MASSLEELLA+EGFRGRR RK G +K++AT TSNDHSQET NS SDL GQ+ MRP
Sbjct: 102 MASSLEELLAEEGFRGRRPMRKSKGSIKSYATITSNDHSQETGNSDSDLDGQLRNAMRPS 161
Query: 61 QLRCSSSTDFRSRGAIENFLEVDNFTGREERDKRPSKEYIDRLDGKRHGDAIEQKPRFIN 120
R SSS DFRSRG I+N E DNFT RE+ DK+ S+EY++RL GK HGD IE+KP IN
Sbjct: 162 LFRRSSSGDFRSRGIIKNLTEGDNFTNREKIDKKSSREYVERLYGKGHGDVIERKPCLIN 221
Query: 121 LAKNKLQRGNNIISEEANESFNDIYSNEVHIRHGVKGEA--KEEVKERWSRKIIDVEKRQ 180
+++K +RG+NII EE +ESF DIYSNEVHIRHGVKGEA KE+ KERWS IDVEKRQ
Sbjct: 222 SSRDKPKRGDNIILEEESESFKDIYSNEVHIRHGVKGEAREKEQQKERWSGNNIDVEKRQ 281
Query: 181 ESSLKKNLFGRMNIHHSNKTAVNFPERYYDRSNDSTTNWKSFKDSHSQTQGNFVDSVSIP 240
+SLKKNLF +N HHS K AV PER YD+S S N KSF+ + S+ Q + V+SVSIP
Sbjct: 282 GNSLKKNLFAGINFHHSCKAAVKLPERSYDKS-VSACNRKSFEHNQSRMQDSNVESVSIP 341
Query: 241 ALNLAAVQVVASIVNGYLKYFLKDKDFRLTFQHNSFSLLDFIEVEGCYNSKVVAILKQSI 300
L++ AV+ V SI+NGYLK+FLKDKDFRLT +HNS +LL+FI V G SKVVA L+Q+I
Sbjct: 342 TLDVVAVRAVVSIINGYLKHFLKDKDFRLTLRHNSSTLLNFIGVGGRNTSKVVANLEQAI 401
Query: 301 DEVEKAAEGLSTEKDLKKALMQLSMIAGLNTNALKDGFTSGISNSKLSACAHLYLGIAFK 360
D VEKAAEGLSTEKDLKKAL+ LSM+ GL+T+ALKDGF GISN+KLSACAHLYL I FK
Sbjct: 402 DVVEKAAEGLSTEKDLKKALLLLSMMTGLSTDALKDGFKYGISNTKLSACAHLYLSIIFK 461
Query: 361 IQNKEISSAKHILQVFCELPFQARIILFPELWDDLFLPHLSHIKSWYDNEADSLVDTPNQ 420
IQ KE SSAKHILQVFC+LPFQARIILFPELWDDLFLPHL++IKSWYD+EAD LVDTP+Q
Sbjct: 462 IQKKENSSAKHILQVFCDLPFQARIILFPELWDDLFLPHLTNIKSWYDHEADKLVDTPSQ 521
Query: 421 LSNHKVLDKVYNNTLDSGTCKFAVYYKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNST 480
SN K+LDKV+N TLDSGT KFAVYYK+WLTGIEAPAPSI +PA+SF+GV ESP +NST
Sbjct: 522 SSNQKLLDKVFNETLDSGTRKFAVYYKDWLTGIEAPAPSIAVPALSFEGVNQESP-NNST 581
Query: 481 STTRPNDFVSPNLMVSKKLYDAMFATSKNPGAPYAESEWESENLGNCARSSHSSNVSKHT 540
+ PNDFVSP+LMVSKKLYDAMFAT+KNPGAP ESEWESEN NC RSS+SSNVSKHT
Sbjct: 582 AKKLPNDFVSPHLMVSKKLYDAMFATTKNPGAPDTESEWESENPENCVRSSNSSNVSKHT 641
Query: 541 QMYYSDTVKNLDQDTDEDCTGSTTEKPSPSENCKAQVWKMYNVNILSEMEDSDEFSISMT 600
Q+YYSDTVK++D DTDED TGSTT+ S ENCKAQ WKMYNVNIL EM+DSDEF S+T
Sbjct: 642 QVYYSDTVKDIDHDTDEDSTGSTTDNTSSFENCKAQKWKMYNVNILLEMDDSDEFCSSVT 701
Query: 601 WKKNEIDFKALH 608
WKKN+IDF+ LH
Sbjct: 702 WKKNDIDFEVLH 711
BLAST of Sed0010857 vs. ExPASy TrEMBL
Match:
A0A6J1DJ97 (putative E3 ubiquitin-protein ligase LIN-2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021416 PE=4 SV=1)
HSP 1 Score: 822.0 bits (2122), Expect = 1.6e-234
Identity = 438/612 (71.57%), Postives = 504/612 (82.35%), Query Frame = 0
Query: 1 MASSLEELLAKEGFRGRRSFRKPSGPLKAHATNTSNDHSQETRNSVSDLGGQV---MRPF 60
MASSLEELLA+EGFRGRR RK G +K++AT TSNDHSQET NS SDL GQ+ MRP
Sbjct: 1 MASSLEELLAEEGFRGRRPMRKSKGSIKSYATITSNDHSQETGNSDSDLDGQLRNAMRPS 60
Query: 61 QLRCSSSTDFRSRGAIENFLEVDNFTGREERDKRPSKEYIDRLDGKRHGDAIEQKPRFIN 120
R SSS DFRSRG I+N E DNFT RE+ DK+ S+EY++RL GK HGD IE+KP IN
Sbjct: 61 LFRRSSSGDFRSRGIIKNLTEGDNFTNREKIDKKSSREYVERLYGKGHGDVIERKPCLIN 120
Query: 121 LAKNKLQRGNNIISEEANESFNDIYSNEVHIRHGVKGEA--KEEVKERWSRKIIDVEKRQ 180
+++K +RG+NII EE +ESF DIYSNEVHIRHGVKGEA KE+ KERWS IDVEKRQ
Sbjct: 121 SSRDKPKRGDNIILEEESESFKDIYSNEVHIRHGVKGEAREKEQQKERWSGNNIDVEKRQ 180
Query: 181 ESSLKKNLFGRMNIHHSNKTAVNFPERYYDRSNDSTTNWKSFKDSHSQTQGNFVDSVSIP 240
+SLKKNLF +N HHS K AV PER YD+S S N KSF+ + S+ Q + V+SVSIP
Sbjct: 181 GNSLKKNLFAGINFHHSCKAAVKLPERSYDKS-VSACNRKSFEHNQSRMQDSNVESVSIP 240
Query: 241 ALNLAAVQVVASIVNGYLKYFLKDKDFRLTFQHNSFSLLDFIEVEGCYNSKVVAILKQSI 300
L++ AV+ V SI+NGYLK+FLKDKDFRLT +HNS +LL+FI V G SKVVA L+Q+I
Sbjct: 241 TLDVVAVRAVVSIINGYLKHFLKDKDFRLTLRHNSSTLLNFIGVGGRNTSKVVANLEQAI 300
Query: 301 DEVEKAAEGLSTEKDLKKALMQLSMIAGLNTNALKDGFTSGISNSKLSACAHLYLGIAFK 360
D VEKAAEGLSTEKDLKKAL+ LSM+ GL+T+ALKDGF GISN+KLSACAHLYL I FK
Sbjct: 301 DVVEKAAEGLSTEKDLKKALLLLSMMTGLSTDALKDGFKYGISNTKLSACAHLYLSIIFK 360
Query: 361 IQNKEISSAKHILQVFCELPFQARIILFPELWDDLFLPHLSHIKSWYDNEADSLVDTPNQ 420
IQ KE SSAKHILQVFC+LPFQARIILFPELWDDLFLPHL++IKSWYD+EAD LVDTP+Q
Sbjct: 361 IQKKENSSAKHILQVFCDLPFQARIILFPELWDDLFLPHLTNIKSWYDHEADKLVDTPSQ 420
Query: 421 LSNHKVLDKVYNNTLDSGTCKFAVYYKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNST 480
SN K+LDKV+N TLDSGT KFAVYYK+WLTGIEAPAPSI +PA+SF+GV ESP +NST
Sbjct: 421 SSNQKLLDKVFNETLDSGTRKFAVYYKDWLTGIEAPAPSIAVPALSFEGVNQESP-NNST 480
Query: 481 STTRPNDFVSPNLMVSKKLYDAMFATSKNPGAPYAESEWESENLGNCARSSHSSNVSKHT 540
+ PNDFVSP+LMVSKKLYDAMFAT+KNPGAP ESEWESEN NC RSS+SSNVSKHT
Sbjct: 481 AKKLPNDFVSPHLMVSKKLYDAMFATTKNPGAPDTESEWESENPENCVRSSNSSNVSKHT 540
Query: 541 QMYYSDTVKNLDQDTDEDCTGSTTEKPSPSENCKAQVWKMYNVNILSEMEDSDEFSISMT 600
Q+YYSDTVK++D DTDED TGSTT+ S ENCKAQ WKMYNVNIL EM+DSDEF S+T
Sbjct: 541 QVYYSDTVKDIDHDTDEDSTGSTTDNTSSFENCKAQKWKMYNVNILLEMDDSDEFCSSVT 600
Query: 601 WKKNEIDFKALH 608
WKKN+IDF+ LH
Sbjct: 601 WKKNDIDFEVLH 610
BLAST of Sed0010857 vs. ExPASy TrEMBL
Match:
A0A1S3BRI4 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103492492 PE=4 SV=1)
HSP 1 Score: 807.4 bits (2084), Expect = 4.2e-230
Identity = 435/661 (65.81%), Postives = 495/661 (74.89%), Query Frame = 0
Query: 1 MASSLEELLAKEGFRGRRSFRKPSGPLKAHATNTSNDHSQETRNSVSDLGGQV---MRPF 60
MASSLEELLA+EGFRGRR RK GP +H T+TSN+ SQ+ RN SDLGGQV M+P
Sbjct: 1 MASSLEELLAEEGFRGRRPIRKSKGPFNSHTTSTSNNDSQDKRNLDSDLGGQVRTTMKPS 60
Query: 61 QLRCSSSTDFRSRGAIENFLEVDNFTGREERDKRPSKEYIDRLDGKRHGDAIEQKPRFIN 120
LR SS DF SRG +++ E FT RE+RDK+ SK+Y++ DGKRH + EQKP N
Sbjct: 61 LLRHSSDGDFHSRGIMKSLTEGGTFTYREKRDKKSSKQYVEGFDGKRHVNVTEQKPCITN 120
Query: 121 LAKNKLQRGNNIISEEANESFNDIYSNEVHIRHGVKGEAKEE--VKERWSRKIIDVEKRQ 180
LAK+K QR + ISE+ NE+F IYSN+VH+RHGVK AKE+ KERWS K IDVEKRQ
Sbjct: 121 LAKDKTQRRHRYISEDENENFKGIYSNKVHVRHGVKSVAKEKELYKERWSGKNIDVEKRQ 180
Query: 181 ESSLKKNLFGRMNIHHSNKTAVNFPERYYDRS--NDSTTNWKSFKDSHSQTQGN------ 240
+SLKKNLFGR+N HH N+TAV PER YD+S N ST NWK+F+D HSQT N
Sbjct: 181 RNSLKKNLFGRINFHHCNETAVYLPERSYDKSKTNASTRNWKNFEDDHSQTHDNFEDDHS 240
Query: 241 --------------------------------------FVDSVSIPALNLAAVQVVASIV 300
FVD VS+PAL+ AVQ V SI+
Sbjct: 241 QTHDTFEDDRSQTHDTFEDDRSQTHDTFEDDHSQTQDTFVDLVSLPALDEVAVQAVVSII 300
Query: 301 NGYLKYFLKDKDFRLTFQHNSFSLLDFIEVEGCYNSKVVAILKQSIDEVEKAAEGLSTEK 360
NG+LKYFLKDKDFRL + N+F+ L+FI VE C +SKVVA L+Q+ID VEKAAEGLSTEK
Sbjct: 301 NGHLKYFLKDKDFRLMLRQNTFNPLNFIGVEECNSSKVVATLEQAIDVVEKAAEGLSTEK 360
Query: 361 DLKKALMQLSMIAGLNTNALKDGFTSGISNSKLSACAHLYLGIAFKIQNKEISSAKHILQ 420
+LKKAL+QLSMIAGLNTNALKDGFT GISNSKLSACAHLYLGI FKIQNK+ SSAKHILQ
Sbjct: 361 NLKKALLQLSMIAGLNTNALKDGFTFGISNSKLSACAHLYLGIIFKIQNKKRSSAKHILQ 420
Query: 421 VFCELPFQARIILFPELWDDLFLPHLSHIKSWYDNEADSLVDTPNQLSNHKVLDKVYNNT 480
VFC L FQARI+LFPELWDDLFLPHL HIKSWYD EADSLV+ P Q K+LDKVYN T
Sbjct: 421 VFCNLTFQARIVLFPELWDDLFLPHLLHIKSWYDYEADSLVNAPKQSRKQKLLDKVYNET 480
Query: 481 LDSGTCKFAVYYKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNSTSTTRPNDFVSPNLM 540
LDSGTCK+AVYYK+WLTGIEA PSIV+PAVSF+GV ESP++NST+TT NDFVSPNLM
Sbjct: 481 LDSGTCKYAVYYKDWLTGIEALEPSIVVPAVSFEGVDQESPVNNSTATTLCNDFVSPNLM 540
Query: 541 VSKKLYDAMFATSKNPGAPYAESEWESENLGNCARSSHSSNVSKHTQMYYSDTVKNLDQD 600
VSKKLYDAMFATSKN AP+ E EWE ENL NC RSS+SSNVSKHTQ+YYSDT K+LDQD
Sbjct: 541 VSKKLYDAMFATSKNQAAPHTEIEWELENLDNCVRSSNSSNVSKHTQIYYSDTTKDLDQD 600
Query: 601 TDEDCTGSTTEKPSPSENCKAQVWKMYNVNILSEMEDSDEFSISMTWKKNEIDFKALHGS 611
TD D GSTTE S SENCKAQ WK YN+N LSEM+ SDEF S TWK NEIDF+ LH
Sbjct: 601 TDADSMGSTTENTSSSENCKAQEWKTYNINALSEMDGSDEFCSSTTWKNNEIDFEVLHAQ 660
BLAST of Sed0010857 vs. ExPASy TrEMBL
Match:
A0A1S3BRV1 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103492492 PE=4 SV=1)
HSP 1 Score: 807.4 bits (2084), Expect = 4.2e-230
Identity = 435/661 (65.81%), Postives = 495/661 (74.89%), Query Frame = 0
Query: 1 MASSLEELLAKEGFRGRRSFRKPSGPLKAHATNTSNDHSQETRNSVSDLGGQV---MRPF 60
MASSLEELLA+EGFRGRR RK GP +H T+TSN+ SQ+ RN SDLGGQV M+P
Sbjct: 1 MASSLEELLAEEGFRGRRPIRKSKGPFNSHTTSTSNNDSQDKRNLDSDLGGQVRTTMKPS 60
Query: 61 QLRCSSSTDFRSRGAIENFLEVDNFTGREERDKRPSKEYIDRLDGKRHGDAIEQKPRFIN 120
LR SS DF SRG +++ E FT RE+RDK+ SK+Y++ DGKRH + EQKP N
Sbjct: 61 LLRHSSDGDFHSRGIMKSLTEGGTFTYREKRDKKSSKQYVEGFDGKRHVNVTEQKPCITN 120
Query: 121 LAKNKLQRGNNIISEEANESFNDIYSNEVHIRHGVKGEAKEE--VKERWSRKIIDVEKRQ 180
LAK+K QR + ISE+ NE+F IYSN+VH+RHGVK AKE+ KERWS K IDVEKRQ
Sbjct: 121 LAKDKTQRRHRYISEDENENFKGIYSNKVHVRHGVKSVAKEKELYKERWSGKNIDVEKRQ 180
Query: 181 ESSLKKNLFGRMNIHHSNKTAVNFPERYYDRS--NDSTTNWKSFKDSHSQTQGN------ 240
+SLKKNLFGR+N HH N+TAV PER YD+S N ST NWK+F+D HSQT N
Sbjct: 181 RNSLKKNLFGRINFHHCNETAVYLPERSYDKSKTNASTRNWKNFEDDHSQTHDNFEDDHS 240
Query: 241 --------------------------------------FVDSVSIPALNLAAVQVVASIV 300
FVD VS+PAL+ AVQ V SI+
Sbjct: 241 QTHDTFEDDRSQTHDTFEDDRSQTHDTFEDDHSQTQDTFVDLVSLPALDEVAVQAVVSII 300
Query: 301 NGYLKYFLKDKDFRLTFQHNSFSLLDFIEVEGCYNSKVVAILKQSIDEVEKAAEGLSTEK 360
NG+LKYFLKDKDFRL + N+F+ L+FI VE C +SKVVA L+Q+ID VEKAAEGLSTEK
Sbjct: 301 NGHLKYFLKDKDFRLMLRQNTFNPLNFIGVEECNSSKVVATLEQAIDVVEKAAEGLSTEK 360
Query: 361 DLKKALMQLSMIAGLNTNALKDGFTSGISNSKLSACAHLYLGIAFKIQNKEISSAKHILQ 420
+LKKAL+QLSMIAGLNTNALKDGFT GISNSKLSACAHLYLGI FKIQNK+ SSAKHILQ
Sbjct: 361 NLKKALLQLSMIAGLNTNALKDGFTFGISNSKLSACAHLYLGIIFKIQNKKRSSAKHILQ 420
Query: 421 VFCELPFQARIILFPELWDDLFLPHLSHIKSWYDNEADSLVDTPNQLSNHKVLDKVYNNT 480
VFC L FQARI+LFPELWDDLFLPHL HIKSWYD EADSLV+ P Q K+LDKVYN T
Sbjct: 421 VFCNLTFQARIVLFPELWDDLFLPHLLHIKSWYDYEADSLVNAPKQSRKQKLLDKVYNET 480
Query: 481 LDSGTCKFAVYYKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNSTSTTRPNDFVSPNLM 540
LDSGTCK+AVYYK+WLTGIEA PSIV+PAVSF+GV ESP++NST+TT NDFVSPNLM
Sbjct: 481 LDSGTCKYAVYYKDWLTGIEALEPSIVVPAVSFEGVDQESPVNNSTATTLCNDFVSPNLM 540
Query: 541 VSKKLYDAMFATSKNPGAPYAESEWESENLGNCARSSHSSNVSKHTQMYYSDTVKNLDQD 600
VSKKLYDAMFATSKN AP+ E EWE ENL NC RSS+SSNVSKHTQ+YYSDT K+LDQD
Sbjct: 541 VSKKLYDAMFATSKNQAAPHTEIEWELENLDNCVRSSNSSNVSKHTQIYYSDTTKDLDQD 600
Query: 601 TDEDCTGSTTEKPSPSENCKAQVWKMYNVNILSEMEDSDEFSISMTWKKNEIDFKALHGS 611
TD D GSTTE S SENCKAQ WK YN+N LSEM+ SDEF S TWK NEIDF+ LH
Sbjct: 601 TDADSMGSTTENTSSSENCKAQEWKTYNINALSEMDGSDEFCSSTTWKNNEIDFEVLHAQ 660
BLAST of Sed0010857 vs. ExPASy TrEMBL
Match:
A0A6J1JL12 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111485379 PE=4 SV=1)
HSP 1 Score: 783.9 bits (2023), Expect = 5.0e-223
Identity = 424/612 (69.28%), Postives = 485/612 (79.25%), Query Frame = 0
Query: 1 MASSLEELLAKEGFRGRRSFRKPSGPLKAHATNTSNDHSQETRNSVSDLGGQV---MRPF 60
MASSL++LLA+EGFR RR RK GP K+HATNTSNDH Q++RNSVSDLGGQV MRP
Sbjct: 1 MASSLKDLLAEEGFRARRPLRKSKGPFKSHATNTSNDHCQKSRNSVSDLGGQVRSLMRPS 60
Query: 61 QLRCSSSTDFRSRGAIENFLEVDNFTGREERDKRPSKEYIDRLDGKRHGDAIEQKPRFIN 120
R S S DNFT R++ DK+ S EY++ LDGKRHG+ IEQ P IN
Sbjct: 61 LHRHSFSG--------------DNFTNRDKMDKKLSNEYVEILDGKRHGEVIEQMPWLIN 120
Query: 121 LAKNKLQRGNNIISEEANESFNDIYSNEVHIRHGVKGEAKE--EVKERWSRKIIDVEKRQ 180
LAK+K QRG+NIISEE NE+F D+YSNE HIRHGVKGEAKE + +E WS K I+ E R
Sbjct: 121 LAKDKPQRGDNIISEEENENFKDLYSNEKHIRHGVKGEAKEKKQYEESWSGKDINAEIRH 180
Query: 181 ESSLKKNLFGRMNIHHSNKTAVNFPERYYDRSNDSTTNWKSFKDSHSQTQGNFVDSVSIP 240
+SLK FGR N HSN V PER Y +SN S +N KSF+ +HSQ Q +FVDSV IP
Sbjct: 181 RNSLKIKGFGRTNFQHSNSAKV--PERPYHKSNGSASNRKSFEVNHSQAQDSFVDSVKIP 240
Query: 241 ALNLAAVQVVASIVNGYLKYFLKDKDFRLTFQHNSFSLLDFIEVEGCYNSKVVAILKQSI 300
AL++AA+Q V SI+NGYLKYF KDKDFR T +HNSFSLL+FI VEG +SKVV L+Q+I
Sbjct: 241 ALDVAAIQAVISIINGYLKYFFKDKDFRSTLRHNSFSLLNFIGVEGRKSSKVVTSLEQAI 300
Query: 301 DEVEKAAEGLSTEKDLKKALMQLSMIAGLNTNALKDGFTSGISNSKLSACAHLYLGIAFK 360
D VEKAAEGLSTEKDLK+AL QLSMIAGLNTNALKDGFTS ISNSKLSA AHLYLG+ FK
Sbjct: 301 DVVEKAAEGLSTEKDLKRALWQLSMIAGLNTNALKDGFTSEISNSKLSALAHLYLGLIFK 360
Query: 361 IQNKEISSAKHILQVFCELPFQARIILFPELWDDLFLPHLSHIKSWYDNEADSLVDTPNQ 420
Q K+ SSAKHILQVF +P+QARIILFPELWD LFLPHLSHIKSWYD+E DSLVDT NQ
Sbjct: 361 KQKKQNSSAKHILQVFFGIPYQARIILFPELWDYLFLPHLSHIKSWYDHEVDSLVDTSNQ 420
Query: 421 LSNHKVLDKVYNNTLDSGTCKFAVYYKNWLTGIEAPAPSIVIPAVSFKGVGPESPLDNST 480
S HK+L KVYN TLDSGTC+FAVYYK+WLTGIEAPAPSIV+P+VSF+GV SPL+NST
Sbjct: 421 SSKHKLLFKVYNETLDSGTCEFAVYYKDWLTGIEAPAPSIVVPSVSFEGVDQGSPLNNST 480
Query: 481 STTRPNDFVSPNLMVSKKLYDAMFATSKNPGAPYAESEWESENLGNCARSSHSSNVSKHT 540
+ T PNDFVS NLMVSKKLYDAMFA+S+ PGAP E+EWESENL NC RSS+SS+ SKHT
Sbjct: 481 AATLPNDFVSSNLMVSKKLYDAMFASSRAPGAPDTENEWESENLDNCVRSSNSSSFSKHT 540
Query: 541 QMYYSDTVKNLDQDTDEDCTGSTTEKPSPSENCKAQVWKMYNVNILSEMEDSDEFSISMT 600
Q+YYSDTVK+LDQDTDED GST E + ENCKAQ WKMYN+NILSEM DSDEF S
Sbjct: 541 QIYYSDTVKDLDQDTDEDSLGSTAENTTLFENCKAQEWKMYNINILSEM-DSDEFCNSTA 595
Query: 601 WKKNEIDFKALH 608
KKN+I+F+ +H
Sbjct: 601 LKKNDINFEVMH 595
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038878502.1 | 4.7e-236 | 70.42 | putative E3 ubiquitin-protein ligase LIN isoform X2 [Benincasa hispida] | [more] |
| XP_038878500.1 | 4.7e-236 | 70.42 | putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Benincasa hispida] >XP_03... | [more] |
| XP_022154073.1 | 3.4e-234 | 71.57 | putative E3 ubiquitin-protein ligase LIN-2 isoform X2 [Momordica charantia] | [more] |
| XP_022154072.1 | 3.4e-234 | 71.57 | putative E3 ubiquitin-protein ligase LIN-2 isoform X1 [Momordica charantia] | [more] |
| XP_004149032.2 | 9.2e-232 | 67.54 | putative E3 ubiquitin-protein ligase LIN isoform X1 [Cucumis sativus] >XP_031737... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| D1FP53 | 2.5e-14 | 27.60 | Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula OX=3880 GN=LIN P... | [more] |
| C6L7U1 | 8.1e-13 | 29.84 | Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus OX=34305 GN=CERBER... | [more] |
| D1FP57 | 8.1e-13 | 29.84 | Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus OX=34305 GN=LIN PE... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DKP1 | 1.6e-234 | 71.57 | putative E3 ubiquitin-protein ligase LIN-2 isoform X1 OS=Momordica charantia OX=... | [more] |
| A0A6J1DJ97 | 1.6e-234 | 71.57 | putative E3 ubiquitin-protein ligase LIN-2 isoform X2 OS=Momordica charantia OX=... | [more] |
| A0A1S3BRI4 | 4.2e-230 | 65.81 | RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103492492 PE=4 ... | [more] |
| A0A1S3BRV1 | 4.2e-230 | 65.81 | RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103492492 PE=4 ... | [more] |
| A0A6J1JL12 | 5.0e-223 | 69.28 | RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111485379 P... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
