Sed0010561 (gene) Chayote v1

Overview


Name	Sed0010561
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG04: 2610958 .. 2614426 (+)
RNA-Seq Expression	Sed0010561
Synteny	Sed0010561

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGACGAATATGGAAATAGTAGAAATACCATTTCCCTCCTCGACCAAATCTTTTGGCAGATACAAAAGCAACCCTGCAATTGATTTGCAGAGGCCGAAACTGGCAATTCCCAATTCCATCACACCAAAATCCGTCCCATTAATGGCGAAATCGCTTCCATCATCAGCGATTCGCTTTCAACAATTCGCCAAACTCGTCGTCTCCTCCAAAAAGCCTCAATCCGCCGCACCACCCAAGCCCAAGACCAAGATCCGAGTTTCGCCGCCCGAAATTCCGATCGCCGACACCGTCAGAATCGTCTCGGAACCGGCGAAGCCAAACAACGACATGGAGGAGAAGCATCGGACTCCGTTGGCCGATGTGGTGTCCGACTGCGTCAAGCGGTGGTTCCAGGACACGCTCAAGGAGGCCAAAGCCGGCGATACGGCGATGCAGGTCTTGGTTGGGCAAATGTTTTGTTCAGGCTATGGAGTTCCTAAGGATACTCGGAAGGTTTGCGGTTTTTTTTTTTTGATTTCTACATTTTGTGTTTTTGATCTGTTGTTTGTTGTGGTTGGATGGATTTGGGGAATTTGAGAGGATGTCTTTTTGTGGAAATTTTTGTGTGATTTGAATGGAATACAGAAGTTTGATTGTTTCTTGAAGGATTGTGAAGTACATTAAGCTCAATCCATGTGTTAATTTATTATGATTTTCCTTGACAACCAAATGTTCATGTTGTATGATCAGACATTTCGGTTCTCTTTCACTCATCCGAATCGAGATATGGAGAGGTTATTTTGTGTGCGTTGTTCTACAAATTATGTAAAATATTTGGCTCGAGAGAAATACGAGGACTTTGAGAGTGAAAATAGGCAAATTTTTGGTGGAGTGTCTTTAATATTGGTCCTAATGCCTTGATTCAAAAAAAAATATTGGTCCTAATGCATTTGTTTCTAAAGGGTTTTCTCTCATTCTTAAACTAGGGTCGTTAAACGTTAGTATAACTTAACTTAACCATTATAGAGTGGTCTAGTAGTCAAGAGATCCTTAAGTAACTACAAGACGCGCCATTTAACTCGAAATTAATTTTCTACGAGTTTTCTTTGACATTCAAATGTCATAGGTTAAGACGATATGAATATAATCATTTGAGCTATATGTTGCCTGACAATGGGCAAGGTGAGTGTCAGCTGACCCAGATAATCACGAATATAATCATTTGACCTATAGGTTACAGATTTGAATTCCCACCTCTTCATATTATTGAACAAGTTCGTTGCTTTGTCAAAAAAAAAAAGAGAAAATAAATAACTTGTCAATTTTTGTAATCTCTCGTTTGTTTCTCATCATCTCATGTACAGCTTCTTTTGTGATGGATGTCCTTTTCTTTTCTGTACTTTGTTTTTTTCACAACACTTCATATAGTTTCCCAAGTTTCAGATACCCTTTTGAATATATATATAAATAAATGTTGGGTTTCTGAATTAAGGGACGTGCTTGGATCAATCGAGCTTCGAAAAGTCACCCAACAGTTTGGAAAGTAAGCGATAGACATCCAGGTATTCCCATCTCCCACATAGTCAGTTGGGGTAGTAATCTCTTGGCATTGCTTCAAGTTCCTGACTTTTTTTTTTTTTTTTGGTTCTTTAGCTTACTTGGCGACTAATTCTGAATCAAGCGATGGGAGAGTAAAACAAGATGATATCAGATGATCCTCTTCATTACTTCACTAATCTAAGTAAGTTGTTCTTAGTTCTAATCTAAGTTTTTACAGTTCGTTTTGTGTTTTTCACAGCCTGCTGAGATAGATCTCTTTTGTTTGCACATAAAATTTTCGATGTTGGTATATTATCTATCTACCTATTATTTCTATTTAAGCATGGTTTGGATTTTAGAAGAAATATTACATTTTTGGTTTAGTTCCCATATTAGTCCTTGAACTTAAATTTATTTCATTTGAGTTTCTTAACTCGTTAGTATTTACAAAACAACCACTTGCCCTGTTGATATTTTGCCATCTAGTTTATAAGATGGAGGAGAACTTTGGCTGTGTGTATTGACGTGCTTACATTGACATGGAGTGAATATGAAAGTGAAACCATCCCAGGCCAATATTAGTTATTAACCTAGTAGGGACTGAATATGTTCAAAGGCTTGCATCTTTCCTCGGAGACCCCCAAGCATCTACCAATGAGACTGCCCCTTGGGGACAAAGGCTTGCATCCTCTTTAAAAATGATATGAGGTCCACCTGTATTAAAAATATTTATAAACACGAAACCATAATGTAAAATGGGGAGTGAAGTACTTCTATTGTACCAATCATCATAGGTTGACCCATCGGTCATAGAGGGCCTTGAAGATCCCAAAGATGACGAGTTCAATCCATTGTGGGCACCTATCTAATAAATAATTTTCTACGGATTTTCTTGGCATCCAAATGTTATAGGGTTAAACGGTATCTCAAGCGAGAACAGTTGAGGTGTGCATAAGCTGGTCTAGATACCATTGTGTGTGCAAAAAAGTGCTTCCATTGTACCAGACTCCCATGGTTTACACTTGTTGAGATATGCCTTGAACGCACCAATGCCATGCGATTAGTAGTCGGGGGTCTCGCTGCCCGGTCTTGCCCCCGTTGCAAACACTTTTCGCATTGCATACCATTGTTTCGTGCATAGCAGCAATGCATTCTGCATGTGTTTAGCGCAACTAGCATTCGCACCCCACAACGCTAGCACTTCCACATTATGTTGTGCGTTCCGCGTGGTGCATCCGCATTCTGTTTAATGTTTACGCATTCTGTAATAGGGTTTAATGAGAGTGCATAAATAAACTTGAATTAAACTCTAGTCATACTATGACGTTCATTCTGTAACTCTGTAATTCGCCTCTTCTTAATAAAATTGCTCTCCCTCTCTGCCCGTGGATTAGCCAACACTACGTTAGGGAATCACGTAAATCCGCGTGTGCTCTTATTTCTTCTTCTCTTGCGTTTATCGTTATCTATTTTCATATCTTCGTGTAGATTTTTGATTGCCGTTTTCATAACAACAGTGTGAATGTGCTCAAGCACATGTATGTTTCTTTACGAAGACGCATGTAAGGCTAATAGGGATCGTTTCCACTCTAATTTGGACATTAATCACAAGATAGTTCAATGCAATATTCTGGCAATTGAGCAGTTCTACTTCTACATTTTGTTTAGTAACCATCTTTTCATCACATTTCTATAATATCATAATTTGTGTTCTCCATTTTTGCAGTTAGTAATCCTTGAAGTGACAAGTTCAGTTCACAGGCAAATGTGGTGACCTAAAGCTTTTGGTGTTATCCATTGTAATCTACTCTCCTCATGTTTATTATACTGTGTTGGTTAAACCAAATTTTGAAGGGTGAATGCATTTGTTTTTTCAATGATCCTTTTCCAGCCTGATGCCTATATTTATTCTTTATAGAAACAGAACTTTCATTTTTAAGTATAAATTGGG

mRNA sequence

AAGACGAATATGGAAATAGTAGAAATACCATTTCCCTCCTCGACCAAATCTTTTGGCAGATACAAAAGCAACCCTGCAATTGATTTGCAGAGGCCGAAACTGGCAATTCCCAATTCCATCACACCAAAATCCGTCCCATTAATGGCGAAATCGCTTCCATCATCAGCGATTCGCTTTCAACAATTCGCCAAACTCGTCGTCTCCTCCAAAAAGCCTCAATCCGCCGCACCACCCAAGCCCAAGACCAAGATCCGAGTTTCGCCGCCCGAAATTCCGATCGCCGACACCGTCAGAATCGTCTCGGAACCGGCGAAGCCAAACAACGACATGGAGGAGAAGCATCGGACTCCGTTGGCCGATGTGGTGTCCGACTGCGTCAAGCGGTGGTTCCAGGACACGCTCAAGGAGGCCAAAGCCGGCGATACGGCGATGCAGGTCTTGGTTGGGCAAATGTTTTGTTCAGGCTATGGAGTTCCTAAGGATACTCGGAAGGGACGTGCTTGGATCAATCGAGCTTCGAAAAGTCACCCAACAGTTTGGAAAGTAAGCGATAGACATCCAGCTTACTTGGCGACTAATTCTGAATCAAGCGATGGGAGAGTAAAACAAGATGATATCAGATGATCCTCTTCATTACTTCACTAATCTAATTAGTAATCCTTGAAGTGACAAGTTCAGTTCACAGGCAAATGTGGTGACCTAAAGCTTTTGGTGTTATCCATTGTAATCTACTCTCCTCATGTTTATTATACTGTGTTGGTTAAACCAAATTTTGAAGGGTGAATGCATTTGTTTTTTCAATGATCCTTTTCCAGCCTGATGCCTATATTTATTCTTTATAGAAACAGAACTTTCATTTTTAAGTATAAATTGGG

Coding sequence (CDS)

ATGGAAATAGTAGAAATACCATTTCCCTCCTCGACCAAATCTTTTGGCAGATACAAAAGCAACCCTGCAATTGATTTGCAGAGGCCGAAACTGGCAATTCCCAATTCCATCACACCAAAATCCGTCCCATTAATGGCGAAATCGCTTCCATCATCAGCGATTCGCTTTCAACAATTCGCCAAACTCGTCGTCTCCTCCAAAAAGCCTCAATCCGCCGCACCACCCAAGCCCAAGACCAAGATCCGAGTTTCGCCGCCCGAAATTCCGATCGCCGACACCGTCAGAATCGTCTCGGAACCGGCGAAGCCAAACAACGACATGGAGGAGAAGCATCGGACTCCGTTGGCCGATGTGGTGTCCGACTGCGTCAAGCGGTGGTTCCAGGACACGCTCAAGGAGGCCAAAGCCGGCGATACGGCGATGCAGGTCTTGGTTGGGCAAATGTTTTGTTCAGGCTATGGAGTTCCTAAGGATACTCGGAAGGGACGTGCTTGGATCAATCGAGCTTCGAAAAGTCACCCAACAGTTTGGAAAGTAAGCGATAGACATCCAGCTTACTTGGCGACTAATTCTGAATCAAGCGATGGGAGAGTAAAACAAGATGATATCAGATGA

Protein sequence

MEIVEIPFPSSTKSFGRYKSNPAIDLQRPKLAIPNSITPKSVPLMAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR

Homology

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BLAST of Sed0010561 vs. NCBI nr
Match: XP_023552657.1 (uncharacterized protein LOC111810237 [Cucurbita pepo subsp. pepo] >XP_023552666.1 uncharacterized protein LOC111810237 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.1 bits (614), Expect = 8.3e-60
Identity = 125/160 (78.12%), Postives = 137/160 (85.62%), Query Frame = 0


Query: 45  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPN 104
           MAKSLP  A R QQFAK+VVSSKKPQS    + K KIRVSPPE PI+D+VR++SEPA+P 
Sbjct: 1   MAKSLP-LASRLQQFAKVVVSSKKPQSPT-ARQKPKIRVSPPETPISDSVRVISEPAQPK 60

Query: 105 NDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDTRKGRA 164
            +ME K+R PLADVVSDC KRWFQDTLKEA AGDTAMQVLVGQMFCSGYGVPKDTRKG A
Sbjct: 61  KNMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLA 120

Query: 165 WINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR 205
           WINRASK   +VWK SDRHPAYLAT+SESSD RVK+DDIR
Sbjct: 121 WINRASKYQASVWKASDRHPAYLATDSESSDRRVKRDDIR 158

[Close]

BLAST of Sed0010561 vs. NCBI nr
Match: XP_022941871.1 (uncharacterized protein LOC111447103 [Cucurbita moschata] >XP_022941872.1 uncharacterized protein LOC111447103 [Cucurbita moschata] >KAG6599959.1 hypothetical protein SDJN03_05192, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239.6 bits (610), Expect = 2.4e-59
Identity = 124/160 (77.50%), Postives = 136/160 (85.00%), Query Frame = 0


Query: 45  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPN 104
           MAKS P  A R QQFAK+VVSSKKPQS    + K KIRVSPPE PI+D+VR++SEPA+P 
Sbjct: 1   MAKSFP-LASRLQQFAKVVVSSKKPQSPT-ARQKPKIRVSPPETPISDSVRVISEPAQPK 60

Query: 105 NDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDTRKGRA 164
            +ME K+R PLADVVSDC KRWFQDTLKEA AGDTAMQVLVGQMFCSGYGVPKDTRKG A
Sbjct: 61  KNMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLA 120

Query: 165 WINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR 205
           WINRASK   +VWK SDRHPAYLAT+SESSD RVK+DDIR
Sbjct: 121 WINRASKYQASVWKASDRHPAYLATDSESSDRRVKRDDIR 158

[Close]

BLAST of Sed0010561 vs. NCBI nr
Match: XP_038892993.1 (uncharacterized protein LOC120081889 [Benincasa hispida])

HSP 1 Score: 236.9 bits (603), Expect = 1.6e-58
Identity = 125/165 (75.76%), Postives = 140/165 (84.85%), Query Frame = 0


Query: 45  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPN 104
           MAKSLPS   R  QFAK+VV+SKKPQSA  P PK++IRVSPPE PI+ TVR++SE  K N
Sbjct: 1   MAKSLPSPT-RLHQFAKVVVASKKPQSAT-PNPKSRIRVSPPETPISGTVRVISELKKNN 60

Query: 105 NDMEEK-----HRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDT 164
           N+MEE+     HRTPLADVVSDCVKRWFQDTLKEA+AGDT+MQVLVGQMFCSGYGVPKDT
Sbjct: 61  NNMEEEKKEEAHRTPLADVVSDCVKRWFQDTLKEARAGDTSMQVLVGQMFCSGYGVPKDT 120

Query: 165 RKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR 205
           +KG AWINRASK+    WKVSDRHP YLAT+SESSD RVKQDD+R
Sbjct: 121 QKGIAWINRASKNQ--AWKVSDRHPGYLATDSESSDRRVKQDDVR 161

[Close]

BLAST of Sed0010561 vs. NCBI nr
Match: KAG6600897.1 (hypothetical protein SDJN03_06130, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233.4 bits (594), Expect = 1.7e-57
Identity = 124/160 (77.50%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 45  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPN 104
           MAKSLP SA   QQFAK+ V SKKPQSAA PKPK++IRVSP E PI DTVR++SEP K N
Sbjct: 1   MAKSLP-SATHLQQFAKIAVFSKKPQSAA-PKPKSRIRVSPSETPIPDTVRVISEPKKKN 60

Query: 105 NDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDTRKGRA 164
             MEEK+R PLADVVSDCVKRWFQDTLKEA AGD AMQVLVGQMFCSGYGVPKDT+KG A
Sbjct: 61  --MEEKNRVPLADVVSDCVKRWFQDTLKEASAGDPAMQVLVGQMFCSGYGVPKDTKKGLA 120

Query: 165 WINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR 205
           WINRASK   +V +VSDRHP YLAT+SE S+ RVKQDDIR
Sbjct: 121 WINRASKGQASVGEVSDRHPGYLATDSEPSNRRVKQDDIR 156

[Close]

BLAST of Sed0010561 vs. NCBI nr
Match: XP_022957582.1 (uncharacterized protein LOC111458931 [Cucurbita moschata] >KAG7031531.1 hypothetical protein SDJN02_05571 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 232.6 bits (592), Expect = 2.9e-57
Identity = 124/160 (77.50%), Postives = 134/160 (83.75%), Query Frame = 0


Query: 45  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPN 104
           MAKSLP SA   QQFAK+ V SKKPQSAA PKPK++IRVSP E PI DTVR++SEP K N
Sbjct: 1   MAKSLP-SATHLQQFAKIAVFSKKPQSAA-PKPKSRIRVSPSETPIPDTVRVISEPKKKN 60

Query: 105 NDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDTRKGRA 164
             MEEK+R PLADVVSDCVKRWFQDTLKEA AGD AMQVLVGQMFCSGYGVPKDT+KG A
Sbjct: 61  --MEEKNRVPLADVVSDCVKRWFQDTLKEASAGDPAMQVLVGQMFCSGYGVPKDTKKGLA 120

Query: 165 WINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR 205
           WINRASK    V +VSDRHP YLAT+SE S+ RVKQDDIR
Sbjct: 121 WINRASKGQAPVGEVSDRHPGYLATDSEPSNRRVKQDDIR 156

[Close]

BLAST of Sed0010561 vs. ExPASy TrEMBL
Match: A0A6J1FNN7 (uncharacterized protein LOC111447103 OS=Cucurbita moschata OX=3662 GN=LOC111447103 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.2e-59
Identity = 124/160 (77.50%), Postives = 136/160 (85.00%), Query Frame = 0


Query: 45  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPN 104
           MAKS P  A R QQFAK+VVSSKKPQS    + K KIRVSPPE PI+D+VR++SEPA+P 
Sbjct: 1   MAKSFP-LASRLQQFAKVVVSSKKPQSPT-ARQKPKIRVSPPETPISDSVRVISEPAQPK 60

Query: 105 NDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDTRKGRA 164
            +ME K+R PLADVVSDC KRWFQDTLKEA AGDTAMQVLVGQMFCSGYGVPKDTRKG A
Sbjct: 61  KNMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLA 120

Query: 165 WINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR 205
           WINRASK   +VWK SDRHPAYLAT+SESSD RVK+DDIR
Sbjct: 121 WINRASKYQASVWKASDRHPAYLATDSESSDRRVKRDDIR 158

[Close]

BLAST of Sed0010561 vs. ExPASy TrEMBL
Match: A0A6J1GZI5 (uncharacterized protein LOC111458931 OS=Cucurbita moschata OX=3662 GN=LOC111458931 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.4e-57
Identity = 124/160 (77.50%), Postives = 134/160 (83.75%), Query Frame = 0


Query: 45  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPN 104
           MAKSLP SA   QQFAK+ V SKKPQSAA PKPK++IRVSP E PI DTVR++SEP K N
Sbjct: 1   MAKSLP-SATHLQQFAKIAVFSKKPQSAA-PKPKSRIRVSPSETPIPDTVRVISEPKKKN 60

Query: 105 NDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDTRKGRA 164
             MEEK+R PLADVVSDCVKRWFQDTLKEA AGD AMQVLVGQMFCSGYGVPKDT+KG A
Sbjct: 61  --MEEKNRVPLADVVSDCVKRWFQDTLKEASAGDPAMQVLVGQMFCSGYGVPKDTKKGLA 120

Query: 165 WINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR 205
           WINRASK    V +VSDRHP YLAT+SE S+ RVKQDDIR
Sbjct: 121 WINRASKGQAPVGEVSDRHPGYLATDSEPSNRRVKQDDIR 156

[Close]

BLAST of Sed0010561 vs. ExPASy TrEMBL
Match: A0A6J1JUC7 (uncharacterized protein LOC111488439 OS=Cucurbita maxima OX=3661 GN=LOC111488439 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 5.4e-57
Identity = 123/160 (76.88%), Postives = 134/160 (83.75%), Query Frame = 0


Query: 45  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPN 104
           MAKSLP SA   QQFAK+ V SKKPQSAA PKPK++IRVSP E PI DTVR++SEP K N
Sbjct: 1   MAKSLP-SASHLQQFAKIAVFSKKPQSAA-PKPKSRIRVSPSETPIPDTVRVISEPKKKN 60

Query: 105 NDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDTRKGRA 164
             MEE++R PLADVVSDCVKRWFQDTLKEA AGD AMQVLVGQMFCSGYGVPKDT+KG A
Sbjct: 61  --MEEQNRVPLADVVSDCVKRWFQDTLKEASAGDPAMQVLVGQMFCSGYGVPKDTKKGLA 120

Query: 165 WINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR 205
           WINRASK    V +VSDRHP YLAT+SE S+ RVKQDDIR
Sbjct: 121 WINRASKGQAPVGEVSDRHPGYLATDSEPSNRRVKQDDIR 156

[Close]

BLAST of Sed0010561 vs. ExPASy TrEMBL
Match: A0A6J1K2L5 (uncharacterized protein LOC111491826 OS=Cucurbita maxima OX=3661 GN=LOC111491826 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 6.0e-56
Identity = 119/155 (76.77%), Postives = 131/155 (84.52%), Query Frame = 0


Query: 45  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPN 104
           MAKSLP  A R QQFAK+VVSSKKPQS   P+ K KIRVSPPE PI+D+VR++SEPA+P 
Sbjct: 1   MAKSLP-LASRLQQFAKVVVSSKKPQSPT-PRQKPKIRVSPPETPISDSVRVISEPAQPK 60

Query: 105 NDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDTRKGRA 164
            +ME K+R PLADVVSDC KRWFQDTLKEA AGDTAMQVLVGQMFCSGYGVPKDTRKG A
Sbjct: 61  KNMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLA 120

Query: 165 WINRASKSHPTVWKVSDRHPAYLATNSESSDGRVK 200
           WI+RASK   +V K SDRHP YLAT+SESSD RVK
Sbjct: 121 WISRASKYQASVRKASDRHPGYLATDSESSDRRVK 153

[Close]

BLAST of Sed0010561 vs. ExPASy TrEMBL
Match: A0A0A0KM25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218760 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.6e-54
Identity = 119/161 (73.91%), Postives = 135/161 (83.85%), Query Frame = 0


Query: 45  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPN 104
           MAKSLPS A RFQQFAKLV SSK PQS   PK K++IR SP E PI+ +VR++SEP K  
Sbjct: 1   MAKSLPSPA-RFQQFAKLVFSSKNPQS--QPK-KSRIRASPSETPISGSVRVISEPNKNK 60

Query: 105 -NDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDTRKGR 164
             + EEK+RTPLADVVSDCVKRWFQDTLKEAKAGDT+MQVLVGQMFCSGYGVPK+T+KG 
Sbjct: 61  YMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGL 120

Query: 165 AWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR 205
           AWI RASK   +VWK SDRHP YLAT+SESSD RVK+D++R
Sbjct: 121 AWIYRASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 157

[Close]

BLAST of Sed0010561 vs. TAIR 10
Match: AT5G05360.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 84 Blast hits to 84 proteins in 24 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 135.2 bits (339), Expect = 5.9e-32
Identity = 73/158 (46.20%), Postives = 102/158 (64.56%), Query Frame = 0


Query: 52  SAIRFQQFAKLVVSSKKPQSAAP-PKPKTKI------RVSPPEIPIADTVRIV------- 111
           S +RF +FA  + S    +   P P P+ K+      R +   +  ++ V++        
Sbjct: 4   SMVRFAEFAIRLSSENPTRPHRPSPSPRNKVFVKKTTRDTTSHLDYSNLVKLEKAGSHSG 63

Query: 112 SEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPK 171
           S PA P +  +  +R PLA VV DCV+RWFQDTLKEAK+GD  MQVLVGQM+CSGYG+PK
Sbjct: 64  SNPA-PASGSDPINRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPK 123

Query: 172 DTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSD 196
           D  KGRAWIN+AS++  + W+VSD+ P Y A++S+S+D
Sbjct: 124 DENKGRAWINKASRTRSSAWQVSDKPPGYNASDSDSND 160

[Close]

BLAST of Sed0010561 vs. TAIR 10
Match: AT5G05360.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 8.0e-29
Identity = 68/147 (46.26%), Postives = 93/147 (63.27%), Query Frame = 0


Query: 52  SAIRFQQFAKLVVSSKKPQSAAP-PKPKTKI------RVSPPEIPIADTVRIV------- 111
           S +RF +FA  + S    +   P P P+ K+      R +   +  ++ V++        
Sbjct: 4   SMVRFAEFAIRLSSENPTRPHRPSPSPRNKVFVKKTTRDTTSHLDYSNLVKLEKAGSHSG 63

Query: 112 SEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPK 171
           S PA P +  +  +R PLA VV DCV+RWFQDTLKEAK+GD  MQVLVGQM+CSGYG+PK
Sbjct: 64  SNPA-PASGSDPINRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPK 123

Query: 172 DTRKGRAWINRASKSHPTVWKVSDRHP 185
           D  KGRAWIN+AS++  + W+VSD+ P
Sbjct: 124 DENKGRAWINKASRTRSSAWQVSDKPP 149

[Close]

BLAST of Sed0010561 vs. TAIR 10
Match: AT2G38450.1 (CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05360.1); Has 88 Blast hits to 88 proteins in 25 species: Archae - 0; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 118.2 bits (295), Expect = 7.5e-27
Identity = 59/114 (51.75%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 81  IRVSPPEIPIADTVRIVSEPAKPNNDMEEKHR-TPLADVVSDCVKRWFQDTLKEAKAGDT 140
           I+ S P  PI+       + +      E   R  PL+ VVSDC KRWF+DTL+EAKAG+ 
Sbjct: 22  IKSSKPIRPISSMDSSDKDSSSTTTTSETTRRFVPLSSVVSDCAKRWFKDTLEEAKAGNI 81

Query: 141 AMQVLVGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSES 194
            MQVL+GQM+ SGYGVPKD RKGR WI +AS+   +VWKV D+ P Y A++S+S
Sbjct: 82  TMQVLLGQMYYSGYGVPKDARKGRLWITKASRVRSSVWKVIDKRPGYNASDSDS 135

The following BLAST results are available for this feature:

BLAST of Sed0010561 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552657.1	8.3e-60	78.13	uncharacterized protein LOC111810237 [Cucurbita pepo subsp. pepo] >XP_023552666....	[more]
XP_022941871.1	2.4e-59	77.50	uncharacterized protein LOC111447103 [Cucurbita moschata] >XP_022941872.1 unchar...	[more]
XP_038892993.1	1.6e-58	75.76	uncharacterized protein LOC120081889 [Benincasa hispida]	[more]
KAG6600897.1	1.7e-57	77.50	hypothetical protein SDJN03_06130, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022957582.1	2.9e-57	77.50	uncharacterized protein LOC111458931 [Cucurbita moschata] >KAG7031531.1 hypothet...	[more]

BLAST of Sed0010561 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0010561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNN7	1.2e-59	77.50	uncharacterized protein LOC111447103 OS=Cucurbita moschata OX=3662 GN=LOC1114471...	[more]
A0A6J1GZI5	1.4e-57	77.50	uncharacterized protein LOC111458931 OS=Cucurbita moschata OX=3662 GN=LOC1114589...	[more]
A0A6J1JUC7	5.4e-57	76.88	uncharacterized protein LOC111488439 OS=Cucurbita maxima OX=3661 GN=LOC111488439...	[more]
A0A6J1K2L5	6.0e-56	76.77	uncharacterized protein LOC111491826 OS=Cucurbita maxima OX=3661 GN=LOC111491826...	[more]
A0A0A0KM25	5.6e-54	73.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218760 PE=4 SV=1	[more]

BLAST of Sed0010561 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05360.1	5.9e-32	46.20	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]
AT5G05360.2	8.0e-29	46.26	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]
AT2G38450.1	7.5e-27	51.75	CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597); BEST Arabidopsis tha...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 105..178 e-value: 3.1E-5 score: 25.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..204
None	No IPR available	PANTHER	PTHR36792:SF6	TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED	coord: 45..196
None	No IPR available	PANTHER	PTHR36792	EXPRESSED PROTEIN	coord: 45..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010561.1	Sed0010561.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding