Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAATTAAACAAATCCCACGACCAAGAGAAGTTGGAGAGGATGTGATAGTGTGGAATTACGAGAAGAATGGTTTGTTCTCAGTTAGATCGACACATTGGCTTGCAAATTCACTACGTAGCGGACCTTCATGTTCTAATAGAGATTGGATTGAAAAGTGGTGGGTTTCGTTATGGAGTTATAATTTACCAAGTAAGGTGAAATTTCTGGTTTGGCGCATGTTTAATAATTTTGGGCCAACTAAGGTGAATCTATGTAAATGTGGACTTGGGAATGAGGCGGTGTGGCCTCGATGTTTGAAATATCCTGAAACAACGCTTCACGCTTTTTGGCAATGTAAAAAGGCTAAAAGATACTGGAAGGAAAGCCTATTTACTACTTTTGATTTTCCTGCCAATGTAAGTGAAGCTTCTGATCTTTTGGGGTGGTTTTTTGAAAAATTAAAAATGGACAGAATGAAAGAGTTCTTATTAATGTGTTGGTGTATTTGGAAAGAAAAGAACAAAGAGGTGGCCAACAACAAAGATGGAAGAAAGCCTTTTGAATCTAATTTCACTTTTAGCTGGGAGTATTGTTGTCAGTTTTTGTCTGAGTTTCGACAAGTCGGGGCAAGTTTGCATTGTGAAGATCTAAACCAAAAGAGACAACTTTTACGCCATAGTTTTTGGGTTCCACCTTGCAGTACGAATTATAAGTTGAATACTGATTCAGCAGTAAATTTTGTGGAAGGTAGAGGTGGATATGGAGCTATTATTCGTAATTTTAAAGGAGAGGTGATGTTTTCGTTGTCTCAACCTGTTCTTTGGATTGTCAACCCAGAAATTGTGGAAGCTATGACCATTAGAGATGGGTGA
mRNA sequence
ATGTTAATTAAACAAATCCCACGACCAAGAGAAGTTGGAGAGGATGTGATAGTGTGGAATTACGAGAAGAATGGTTTGTTCTCAGTTAGATCGACACATTGGCTTGCAAATTCACTACGTAGCGGACCTTCATGTTCTAATAGAGATTGGATTGAAAAGTGGTGGGTTTCGTTATGGAGTTATAATTTACCAAGTAAGGTGAAATTTCTGGTTTGGCGCATGTTTAATAATTTTGGGCCAACTAAGGTGAATCTATGTAAATGTGGACTTGGGAATGAGGCGGTGTGGCCTCGATGTTTGAAATATCCTGAAACAACGCTTCACGCTTTTTGGCAATGTAAAAAGGCTAAAAGATACTGGAAGGAAAGCCTATTTACTACTTTTGATTTTCCTGCCAATGTAAGTGAAGCTTCTGATCTTTTGGGGTGGTTTTTTGAAAAATTAAAAATGGACAGAATGAAAGAGTTCTTATTAATGTGTTGGTGTATTTGGAAAGAAAAGAACAAAGAGGTGGCCAACAACAAAGATGGAAGAAAGCCTTTTGAATCTAATTTCACTTTTAGCTGGGAGTATTGTTGTCAGTTTTTGTCTGAGTTTCGACAAGTCGGGGCAAGTTTGCATTGTGAAGATCTAAACCAAAAGAGACAACTTTTACGCCATAGTTTTTGGGTTCCACCTTGCAGTACGAATTATAAGTTGAATACTGATTCAGCAGTAAATTTTGTGGAAGGTAGAGGTGGATATGGAGCTATTATTCGTAATTTTAAAGGAGAGGTGATGTTTTCGTTGTCTCAACCTGTTCTTTGGATTGTCAACCCAGAAATTGTGGAAGCTATGACCATTAGAGATGGGTGA
Coding sequence (CDS)
ATGTTAATTAAACAAATCCCACGACCAAGAGAAGTTGGAGAGGATGTGATAGTGTGGAATTACGAGAAGAATGGTTTGTTCTCAGTTAGATCGACACATTGGCTTGCAAATTCACTACGTAGCGGACCTTCATGTTCTAATAGAGATTGGATTGAAAAGTGGTGGGTTTCGTTATGGAGTTATAATTTACCAAGTAAGGTGAAATTTCTGGTTTGGCGCATGTTTAATAATTTTGGGCCAACTAAGGTGAATCTATGTAAATGTGGACTTGGGAATGAGGCGGTGTGGCCTCGATGTTTGAAATATCCTGAAACAACGCTTCACGCTTTTTGGCAATGTAAAAAGGCTAAAAGATACTGGAAGGAAAGCCTATTTACTACTTTTGATTTTCCTGCCAATGTAAGTGAAGCTTCTGATCTTTTGGGGTGGTTTTTTGAAAAATTAAAAATGGACAGAATGAAAGAGTTCTTATTAATGTGTTGGTGTATTTGGAAAGAAAAGAACAAAGAGGTGGCCAACAACAAAGATGGAAGAAAGCCTTTTGAATCTAATTTCACTTTTAGCTGGGAGTATTGTTGTCAGTTTTTGTCTGAGTTTCGACAAGTCGGGGCAAGTTTGCATTGTGAAGATCTAAACCAAAAGAGACAACTTTTACGCCATAGTTTTTGGGTTCCACCTTGCAGTACGAATTATAAGTTGAATACTGATTCAGCAGTAAATTTTGTGGAAGGTAGAGGTGGATATGGAGCTATTATTCGTAATTTTAAAGGAGAGGTGATGTTTTCGTTGTCTCAACCTGTTCTTTGGATTGTCAACCCAGAAATTGTGGAAGCTATGACCATTAGAGATGGGTGA
Protein sequence
MLIKQIPRPREVGEDVIVWNYEKNGLFSVRSTHWLANSLRSGPSCSNRDWIEKWWVSLWSYNLPSKVKFLVWRMFNNFGPTKVNLCKCGLGNEAVWPRCLKYPETTLHAFWQCKKAKRYWKESLFTTFDFPANVSEASDLLGWFFEKLKMDRMKEFLLMCWCIWKEKNKEVANNKDGRKPFESNFTFSWEYCCQFLSEFRQVGASLHCEDLNQKRQLLRHSFWVPPCSTNYKLNTDSAVNFVEGRGGYGAIIRNFKGEVMFSLSQPVLWIVNPEIVEAMTIRDG
Homology
BLAST of Sed0010381 vs. NCBI nr
Match:
XP_023904177.1 (uncharacterized protein LOC112015942 [Quercus suber])
HSP 1 Score: 146.0 bits (367), Expect = 5.0e-31
Identity = 83/265 (31.32%), Postives = 130/265 (49.06%), Query Frame = 0
Query: 3 IKQIPRPREVGEDVIVWNYEKNGLFSVRSTHWLANSL---RSGPSCSNRDWIEKWWVSLW 62
I +IP R +D I+W + KNG +SV+S +++A + + CS + ++ W +LW
Sbjct: 137 ICRIPLSRRRVDDSIIWLHNKNGRYSVKSGYYVARQVLRSENWAECSKGNDEQQVWKALW 196
Query: 63 SYNLPSKVKFLVWRMFNNFGPTKVNLCKCGLGNEAVWPRCLKYPETTLHAFWQCKKAKRY 122
N+P+K+K WR PT++NL K + E P CL+ PE +H W+C A+
Sbjct: 197 KMNVPNKIKIFGWRACQGILPTRLNLAKRKIIAETFCPICLQSPENEMHVIWECPVAQDV 256
Query: 123 WKESLFTTFDFPANVSEASDLLGWFFEKLKMDRMKEFLLMCWCIWKEKNKEVANNKDGRK 182
W S P + L + +L+ + M FL+ W +W ++N + K
Sbjct: 257 WAGSRIKLQKCPLGQPDMVQLFLYLLHRLEPEDMALFLVQAWMLWSQRNSVLHGGKLKEP 316
Query: 183 PFESNFTFSWEYCCQFLSEFRQVGASLHCEDLNQKRQLLRHSFWVPPCSTNYKLNTDSAV 242
+ + W L EF QV L D+ Q R + + W PP +K+N D+A+
Sbjct: 317 GWLNKRDVEW------LEEFAQVQDQL---DVLQPRATV-GNVWRPPAHPFFKMNFDAAI 376
Query: 243 NFVEGRGGYGAIIRNFKGEVMFSLS 265
GR G+GA+IRN GEVM +LS
Sbjct: 377 FNDSGRSGFGAVIRNELGEVMAALS 391
BLAST of Sed0010381 vs. NCBI nr
Match:
XP_030483669.1 (uncharacterized protein LOC115700241 [Cannabis sativa])
HSP 1 Score: 139.8 bits (351), Expect = 3.6e-29
Identity = 84/288 (29.17%), Postives = 137/288 (47.57%), Query Frame = 0
Query: 3 IKQIPRPREVGEDVIVWNYEKNGLFSVRSTHWLANSLRSGPSCSNRDWIEKWWVSLWSYN 62
I IP EDV++WN +G ++V+S + A SL + ++ WW W
Sbjct: 547 ILAIPLSLFPAEDVLIWNGTTSGCYTVKSGYQFAVSLADSHETNTSTTLDSWWTKFWKLK 606
Query: 63 LPSKVKFLVWRMFNNFGPTKVNLCKCGLGNEAVWPRCLKYPETTLHAFWQCKKAKRYWKE 122
LPSK++ VW++F+N P L + + P C + ET HA + C +AK W++
Sbjct: 607 LPSKIRIFVWKVFHNALPVASELHRKHIAETPFCPLCKVHKETLNHALFFCTRAKDVWRQ 666
Query: 123 SLFTTFDFPANVSEAS-DLLGWFFEKLKMDRMKEFLLMCWCIWKEKNKEVANNKDGRK-- 182
SL F+F S S D L + ++FL++CW IW E+N E +NK +K
Sbjct: 667 SLL-VFNFKMAASTTSADFLLYVSANTSSTEFEKFLVICWSIWFERNAEY-HNKPSKKAA 726
Query: 183 ---PFESNFTFSWEYCCQFLSEFRQVGASLHCEDLNQKRQLLRHS---FWVPPCSTNYKL 242
F +N+ ++ Q S A+ + ++ S W P KL
Sbjct: 727 AVLDFATNYLLKYQN-AQASSSHNAGSATSTASRASVTQETPLPSPTALWTAPPLGKLKL 786
Query: 243 NTDSAVNFVEGRGGYGAIIRNFKGEVMFSLSQPVLWIVNPEIVEAMTI 282
N+D+A N G+ G GA++R+ G ++ +LS+P+ PE +EA+ +
Sbjct: 787 NSDAACNKALGKIGIGAVVRDSFGVIVAALSKPIQGCFKPEEMEAVAL 831
BLAST of Sed0010381 vs. NCBI nr
Match:
ONK66393.1 (uncharacterized protein A4U43_C06F7380 [Asparagus officinalis])
HSP 1 Score: 139.0 bits (349), Expect = 6.1e-29
Identity = 90/297 (30.30%), Postives = 136/297 (45.79%), Query Frame = 0
Query: 2 LIKQIPRPREVGEDVIVWNYEKNGLFSVRSTHWLANSLR-------SGPSCSNRDWIEKW 61
+I IP PR G D +VW+Y KNG +SV+S +W+A+ R SG S N +
Sbjct: 679 MILSIPLPRNGGVDKLVWHYNKNGRYSVKSGYWVADQARNRREDAASGSSVGNNSLSHQG 738
Query: 62 WVSLWSYNLPSKVKFLVWRMFNNFGPTKVNLCKCGLGNEAVWPRCLKYPETTLHAFWQCK 121
W LW NLP+K+K +WR F P L K +G E C E+ +HA W CK
Sbjct: 739 WKRLWGLNLPNKIKVFLWRACRGFIPCADALFKQHVGVEGRCQGCKGGAESVVHALWDCK 798
Query: 122 KAKRYWKESLFTTFDFPANVSEASDLLGWFFEKLKMDRMKEFLLMCWCIWKEKNKEV--A 181
+ K+ WK + + L + + ++ F ++ W IW ++NK V A
Sbjct: 799 RVKKVWKLTFLHDVCTVWRERDFFYLFNHVAQVAHQNELEWFGILSWFIWHDRNKRVYGA 858
Query: 182 NNKDGRKPFESNFTFSWEYCCQFLSEFRQVGASLHCED-----LNQKRQLLRHSFWVPPC 241
D + E + WE FL+ VG C+D LN R+ W P
Sbjct: 859 TVFDAKNLLERASCW-WE---GFLNAKGMVG----CQDGSRQGLNDLREASLIRIWRKPT 918
Query: 242 STNYKLNTDSAVNFVEGRGGYGAIIRNFKGEVMFSLSQPVLWIVNPEIVEAMTIRDG 285
+ KLN D A++ G G GA++R+ +G + L+ P ++P EA+ + +G
Sbjct: 919 NGFVKLNVDGALDIHRGIYGTGAVVRDERGSCVGVLATPGTGALSPLTCEALALVNG 967
BLAST of Sed0010381 vs. NCBI nr
Match:
XP_030482350.1 (uncharacterized protein LOC115699202 [Cannabis sativa])
HSP 1 Score: 139.0 bits (349), Expect = 6.1e-29
Identity = 84/265 (31.70%), Postives = 131/265 (49.43%), Query Frame = 0
Query: 15 DVIVWNYEKNGLFSVRSTHWLANSLRSGPSCSNRDWIEKWWVSLWSYNLPSKVKFLVWRM 74
D ++WNY G F+V+S + LAN S P SN + WWVS+WS N+P K+K +W+
Sbjct: 133 DALIWNYHPPGCFTVKSAYHLANFTISSPGPSNPANYKSWWVSVWSSNIPPKIKHFIWKA 192
Query: 75 FNNFGPTKVNLCKCGLGNEAVWPRCLKYPETTLHAFWQCKKAKRYWKESLFTTFDFPANV 134
FN+ P+ +NL C + ++ H+ QC +A + WK + F+ F
Sbjct: 193 FNHILPSNLNLFHRKSVPSPYCSICHSHQDSNTHSLLQCSRAGKVWKHASFSQFYSSNKN 252
Query: 135 SEASDLLGWFFEKLKMDRMKEFLLMCWCIWKEKNKEVAN-NKDGRKPFESNFTFSWEYCC 194
+ + + F+ L D+ FL + IW +NK + N N+D ES+ + C
Sbjct: 253 CDIKEFMLRGFDFLAKDQFATFLGLLCAIWNNRNKAILNSNRDTDLCLESSVS------C 312
Query: 195 QFLSEFRQVGASLHCEDLNQKRQLLRHSFWVPPCSTNYKLNTDSAVNFVEGRGGYGAIIR 254
+L E+R+ + HC SF VP S Y+LN D+A+ + GYGA+I
Sbjct: 313 -YLQEYRE---AQHCISPCLVTSQPSPSFQVP--SNMYQLNVDAALLPSSNKHGYGAVIT 372
Query: 255 NFKGEVMFSLSQPVLWIVNPEIVEA 279
N +G+V+ +LS P + P EA
Sbjct: 373 NCQGQVVATLSSPSTSGLPPIFAEA 385
BLAST of Sed0010381 vs. NCBI nr
Match:
XP_030479464.1 (uncharacterized protein LOC115696715 [Cannabis sativa])
HSP 1 Score: 137.5 bits (345), Expect = 1.8e-28
Identity = 85/271 (31.37%), Postives = 135/271 (49.82%), Query Frame = 0
Query: 14 EDVIVWNYEKNGLFSVRSTHWLANSLRSGPSCSNRDWIEKWWVSLWSYNLPSKVKFLVWR 73
ED ++WN +G+ SV+S + +AN+ PS SN +KWW +LWS N+P KVK +WR
Sbjct: 1466 EDFLIWNNHPSGILSVKSAYHIANAGSLPPSSSNSSLSKKWWTTLWSLNIPPKVKTFIWR 1525
Query: 74 MFNNFGPTKVNL-CKCGLGNEAVWPRCLKYPETTLHAFWQCKKAKRYWKESLFTTFDFPA 133
++++ P +NL K L + + C ET HA C A + WK S F +F
Sbjct: 1526 VYHHILPVSLNLFLKKSLPSPSC-SSCNCPTETVSHALLDCSSAAKSWKLSPFRSFFLSN 1585
Query: 134 NVSEASDLLGWFFEKLKMDRMKEFLLMCWCIWKEKNKEVANNKDGRKPFESNFTFSWEYC 193
+ L F L + FL + W IW +N+++ + N SW
Sbjct: 1586 RHQDIKWFLVTAFTDLPKKDLMHFLGLLWAIWHNRNRKLFADFF----MLPNDVVSW--A 1645
Query: 194 CQFLSEFRQVGASLHCEDLNQKRQLLRHSFWVPPCSTN-YKLNTDSAVNFVEGRGGYGAI 253
F+++F+ A L + + H + S Y+LNTD+A + G+ G+GA+
Sbjct: 1646 SAFITDFQD--AQLKKQSALALQPSSPHQYSSSRLSQGFYRLNTDAAKDVQSGKLGFGAV 1705
Query: 254 IRNFKGEVMFSLSQPVLWIVNPEIVEAMTIR 283
IR++K ++ LS PV VNP + EA+++R
Sbjct: 1706 IRDWKNRIVAGLSTPVPGNVNPLMAEALSLR 1727
BLAST of Sed0010381 vs. ExPASy TrEMBL
Match:
A0A803P9P5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 161.0 bits (406), Expect = 7.3e-36
Identity = 90/283 (31.80%), Postives = 150/283 (53.00%), Query Frame = 0
Query: 3 IKQIPRPREVGEDVIVWNYEKNGLFSVRSTHWLANSLRSG-PSCSNRDWIEKWWVSLWSY 62
I+ IP D ++WN+E NG++SV+S + LA L P+ S+ + ++ WW WS
Sbjct: 466 IQSIPLTLCDQSDQLIWNFENNGMYSVKSGYTLATRLEEQLPAASSNNSLQ-WWKKFWSL 525
Query: 63 NLPSKVKFLVWRMFNNFGPTKVNLCKCGLGNEAVWPRCLKYPETTLHAFWQCKKAKRYWK 122
LPSK+K +WR ++ P L + + A+ C + E+T HA + CK+ ++ W+
Sbjct: 526 TLPSKIKIFLWRAMHDCLPVADILHHRHISDSAICTLCHQAIESTTHALFWCKRPRKIWQ 585
Query: 123 ESLFTTFDFPANVSEASDLLGWFFEKLKMDRMKEFLLMCWCIWKEKNKEVANNKDGRKPF 182
S F+ DF + D+L + ++++F + W IW E+NKE +K KP
Sbjct: 586 LSSFSISDFVTHNMSLMDVLQNMSQIWSSKQIEQFACILWSIWNERNKERHGSK--TKPP 645
Query: 183 ESNFTFSWEYCCQFLSEFRQVG---ASLHCEDLNQKRQLLRHSFWVPPCSTNYKLNTDSA 242
E F+ +Y +F S ++ H +Q+++L W+ P S KLNTD+A
Sbjct: 646 EMTLFFAMDYIEEFQSARLNTSFADSATHATTRSQQQELP----WMNPPSGRLKLNTDAA 705
Query: 243 VNFVEGRGGYGAIIRNFKGEVMFSLSQPVLWIVNPEIVEAMTI 282
VN VE G+GAI+RN G+++ +++ P PEI+EA+ +
Sbjct: 706 VNAVENTSGFGAILRNDTGDIIAAMAMPFKGCFKPEIMEALAL 741
BLAST of Sed0010381 vs. ExPASy TrEMBL
Match:
A0A803PVI9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 150.6 bits (379), Expect = 9.9e-33
Identity = 82/279 (29.39%), Postives = 140/279 (50.18%), Query Frame = 0
Query: 3 IKQIPRPREVGEDVIVWNYEKNGLFSVRSTHWLANSLRSGPSCSNRDWIEKWWVSLWSYN 62
+ QIP D ++WN+E NG ++V+S + LA SL ++ + WW WS
Sbjct: 866 VLQIPLSIFPASDQLIWNFETNGAYTVKSGYALATSLEEQMPNASGLQCQTWWNKFWSLT 925
Query: 63 LPSKVKFLVWRMFNNFGPTKVNLCKCGLGNEAVWPRCLKYPETTLHAFWQCKKAKRYWKE 122
LPSKV+ +WR N+ PT L + + + C ETT HA + CK+ ++ W++
Sbjct: 926 LPSKVRIFLWRAINDCLPTAATLHHRHIADSPICLLCQNARETTQHALFYCKRPRKIWRD 985
Query: 123 SLFTTFDFPANVSEASDLLGWFFEKLKMDRMKEFLLMCWCIWKEKNKEVANNKDGRKPFE 182
S FT + +L+ + ++++F+ + W IW E+NKE +K KP+
Sbjct: 986 SSFTLSPMISEYMTIKELMLQVSDLWSNLQIEQFITILWLIWNERNKEKHGHK--TKPYN 1045
Query: 183 SNFTFSWEYCCQFLSEFRQVGASLHCEDLNQKRQLLRHSFWVPPCSTNYKLNTDSAVNFV 242
+ Y + + R+ A+ N Q + + W+ P + KLNTD+A+N
Sbjct: 1046 LLEYSALSYLEDYQAAQRKKPATTPAASHNNLHQ-KQDASWLHPPTGRLKLNTDAAINQA 1105
Query: 243 EGRGGYGAIIRNFKGEVMFSLSQPVLWIVNPEIVEAMTI 282
G GAI+R+ GE++ + S+PV+ PE++EA+ +
Sbjct: 1106 TQTTGCGAILRDSNGEIVAAFSKPVIGSFRPEVMEALAL 1141
BLAST of Sed0010381 vs. ExPASy TrEMBL
Match:
A0A803QJ22 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 149.1 bits (375), Expect = 2.9e-32
Identity = 77/280 (27.50%), Postives = 136/280 (48.57%), Query Frame = 0
Query: 2 LIKQIPRPREVGEDVIVWNYEKNGLFSVRSTHWLANSLRSGPSCSNRDWIEKWWVSLWSY 61
LI+ IP D ++W++E G++SV+S + LA L S+ + + WW W
Sbjct: 166 LIQSIPLTFVEHHDTMIWHHESTGVYSVKSGYILATKLEEQQPMSSGNQAQLWWKKFWGL 225
Query: 62 NLPSKVKFLVWRMFNNFGPTKVNLCKCGLGNEAVWPRCLKYPETTLHAFWQCKKAKRYWK 121
LPSK++ +WR ++ P L + + + C + ET HA + CK+ K+ W+
Sbjct: 226 KLPSKIRIFLWRAIHDCLPVADILHTRHIADSSQCTLCNRANETIFHALFHCKRPKKVWQ 285
Query: 122 ESLFTTFDFPANVSEASDLLGWFFEKLKMDRMKEFLLMCWCIWKEKNKEVANNKDGRKPF 181
S F+ + +L + R+++F + W IW E+NKE +K KP
Sbjct: 286 CSDFSLHSILSRHMNLKELFLQVSSEWSSLRLEQFATILWSIWTERNKERHGSKP--KPH 345
Query: 182 ESNFTFSWEYCCQFLSEFRQVGASLHCEDLNQKRQLLRHSFWVPPCSTNYKLNTDSAVNF 241
+ F+ Y ++ + A+ + + S W+ P S KLNTD+A+N
Sbjct: 346 DVLLYFALSYISEYHDVHGRQPATSSAPAAGHNTAVTKDSDWLNPPSGRLKLNTDAAINT 405
Query: 242 VEGRGGYGAIIRNFKGEVMFSLSQPVLWIVNPEIVEAMTI 282
+E + G+GA++R+ G+++ ++S P PEI EA+ +
Sbjct: 406 MENKSGFGAVLRDCSGQIIAAMSTPFCGCFTPEITEALAL 443
BLAST of Sed0010381 vs. ExPASy TrEMBL
Match:
A0A803PV88 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 5.4e-31
Identity = 78/271 (28.78%), Postives = 137/271 (50.55%), Query Frame = 0
Query: 14 EDVIVWNYEKNGLFSVRSTHWLANSLRSGPSCSNRDWIEKWWVSLWSYNLPSKVKFLVWR 73
+D +VW ++ +G+F+V+S + LANS PS SN + WW + W+ NLP KVK WR
Sbjct: 804 DDTLVWKHDPSGVFTVKSAYHLANSTSLPPSSSNPSFFMSWWKTFWNLNLPPKVKNFSWR 863
Query: 74 MFNNFGPTKVNLCKCGLGNEAVWPRCLKYPETTLHAFWQCKKAKRYWKESLFTTFDFPAN 133
++++ P +NL + + C ET HA C +A + WK S F TF
Sbjct: 864 VYHHILPVALNLFRRKTIPQPHCSFCKNPVETVTHALLDCSRAAKIWKASPFRTFYLSNR 923
Query: 134 VSEASDLLGWFFEKLKMDRMKEFLLMCWCIWKEKNKEVANNKDGRKPFESNFTFSWEYCC 193
+ + + F++L D + L + W IW +NK++ N D +W +
Sbjct: 924 YVDVKEFMLNGFDQLNKDSLSLLLSIMWAIWNSRNKKLFANSD----MAPTDIVAWTH-- 983
Query: 194 QFLSEFRQVGASLHCEDLNQKRQLLRHSFWVPPCSTNYKLNTDSAVNFVEGRGGYGAIIR 253
F+S++++ A + R L R+ V +Y+LNTD+A++ + G GA+++
Sbjct: 984 TFISDYQE--ALSNVNRYKSARILQRNDIDVTVPVNSYRLNTDAALSTERSKLGIGAVVK 1043
Query: 254 NFKGEVMFSLSQPVLWIVNPEIVEAMTIRDG 285
++KG V+ +L+ P + + EA+ ++ G
Sbjct: 1044 DWKGCVVANLAIPAAGALQSTLAEALALKAG 1066
BLAST of Sed0010381 vs. ExPASy TrEMBL
Match:
A0A803QJN9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 1.7e-29
Identity = 84/288 (29.17%), Postives = 137/288 (47.57%), Query Frame = 0
Query: 3 IKQIPRPREVGEDVIVWNYEKNGLFSVRSTHWLANSLRSGPSCSNRDWIEKWWVSLWSYN 62
I IP EDV++WN +G ++V+S + A SL + ++ WW W
Sbjct: 783 ILAIPLSLFPAEDVLIWNGTTSGCYTVKSGYQFAVSLADSHETNTSTTLDSWWTKFWKLK 842
Query: 63 LPSKVKFLVWRMFNNFGPTKVNLCKCGLGNEAVWPRCLKYPETTLHAFWQCKKAKRYWKE 122
LPSK++ VW++F+N P L + + P C + ET HA + C +AK W++
Sbjct: 843 LPSKIRIFVWKVFHNALPVASELHRKHIAETPFCPLCKVHKETLNHALFFCTRAKDVWRQ 902
Query: 123 SLFTTFDFPANVSEAS-DLLGWFFEKLKMDRMKEFLLMCWCIWKEKNKEVANNKDGRK-- 182
SL F+F S S D L + ++FL++CW IW E+N E +NK +K
Sbjct: 903 SLL-VFNFKMAASTTSADFLLYVSANTSSTEFEKFLVICWSIWFERNAEY-HNKPSKKAA 962
Query: 183 ---PFESNFTFSWEYCCQFLSEFRQVGASLHCEDLNQKRQLLRHS---FWVPPCSTNYKL 242
F +N+ ++ Q S A+ + ++ S W P KL
Sbjct: 963 AVLDFATNYLLKYQN-AQASSSHNAGSATSTASRASVTQETPLPSPTALWTAPPLGKLKL 1022
Query: 243 NTDSAVNFVEGRGGYGAIIRNFKGEVMFSLSQPVLWIVNPEIVEAMTI 282
N+D+A N G+ G GA++R+ G ++ +LS+P+ PE +EA+ +
Sbjct: 1023 NSDAACNKALGKIGIGAVVRDSFGVIVAALSKPIQGCFKPEEMEAVAL 1067
BLAST of Sed0010381 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 75.5 bits (184), Expect = 7.8e-14
Identity = 73/282 (25.89%), Postives = 113/282 (40.07%), Query Frame = 0
Query: 15 DVIVWNYEKNGLFSVRSTHWLANSL---RSGPSCSNRDWIEKWWVSLWSYNLPSKVKFLV 74
D W+Y +G ++V+S +W+ + RS P + + + +W K++ +
Sbjct: 211 DSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFL 270
Query: 75 WRMFNNFGPTKVNLCKCGLGNEAVWPRCLKYPETTLHAFWQCKKAKRYWKESLFTTFDFP 134
W+ +N P L L E+ RC ET H ++C A+ W ++ P
Sbjct: 271 WKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTW---AISSIPIP 330
Query: 135 ANVSEASDL---LGWFF-------EKLKMDRMKEFLLMCWCIWKEKNKEVANNKDGRKPF 194
A + L W F + K ++ +LL W +WK +N+ V +
Sbjct: 331 LGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLL--WRLWKNRNELVFRGR------ 390
Query: 195 ESNFTFSWEYCCQFLSEFRQVGASLHCEDLNQKRQLLRHSF--WVPPCSTNYKLNTDSAV 254
E N L E+R E K Q+ R S W PP K NTD+
Sbjct: 391 EFNAQEVLRRAEDDLEEWR---IRTEAESCGTKPQVNRSSCGRWRPPPHQWVKCNTDATW 450
Query: 255 NFVEGRGGYGAIIRNFKGEV--MFSLSQPVLWIVNPEIVEAM 280
N R G G ++RN KGEV M + + P L V +EAM
Sbjct: 451 NRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAM 478
BLAST of Sed0010381 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 67.8 bits (164), Expect = 1.6e-11
Identity = 67/262 (25.57%), Postives = 103/262 (39.31%), Query Frame = 0
Query: 15 DVIVWNYEKNGLFSVRSTHWLANSLRSG--PSCSNRDWIEKWWVSLWSYNLPSKVKFLVW 74
D I+WNY G ++VRS +WL S P+ + +W+ + K+K +W
Sbjct: 117 DKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLW 176
Query: 75 RMFNNFGPTKVNLCKCGLGNEAVWPRCLKYPETTLHAFWQCKKAKRYWK-------ESLF 134
R + T L G+ + PRC + E+ HA + C A W+ +
Sbjct: 177 RALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQL 236
Query: 135 TTFDFPANVSEASDLLGWFFEKLKMDRMKEFL--LMCWCIWKEKNKEVANNKDGRKPFES 194
+ DF N+S + F + M + L + W IWK +N V NK P ++
Sbjct: 237 MSNDFEENISNILN----FVQDTTMSDFHKLLPVWLIWRIWKARN-NVVFNKFRESPSKT 296
Query: 195 NF-----TFSWEYCCQFLSEFRQVGASLHCEDLNQKRQLLRHSF-WVPPCSTNYKLNTDS 254
T W Q H + + RQ+ + W P +T K N D+
Sbjct: 297 VLSAKAETHDWLNATQ-----------SHKKTPSPTRQIAENKIEWRNPPATYVKCNFDA 356
Query: 255 A--VNFVEGRGGYGAIIRNFKG 258
V +E GG+ IIRN G
Sbjct: 357 GFDVQKLEATGGW--IIRNHYG 360
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A803P9P5 | 7.3e-36 | 31.80 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PVI9 | 9.9e-33 | 29.39 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QJ22 | 2.9e-32 | 27.50 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PV88 | 5.4e-31 | 28.78 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QJN9 | 1.7e-29 | 29.17 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 7.8e-14 | 25.89 | Ribonuclease H-like superfamily protein | [more] |
AT3G09510.1 | 1.6e-11 | 25.57 | Ribonuclease H-like superfamily protein | [more] |