Sed0010342 (gene) Chayote v1

Overview


Name	Sed0010342
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Non-specific lipid-transfer protein-like protein
Location	LG10: 35336901 .. 35337907 (-)
RNA-Seq Expression	Sed0010342
Synteny	Sed0010342

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTACCAGCCACAATCCACATTCTCCACTTCCCCACTAAGATTTCCCATTTCCCTTTCTCTCTCCCTCACTAATGGCCGCCGCTAAATTCTCCCTTGCCCTCTTCGCCATCGCCGTCGCCGTCGCCGTCCTAGCCGCGAACCACTCCGCCGTCTCCGCCGCACACGACGCGCCGGCGCCGGCAGCCGACTGCTCCTCCCTCATCCTCCAGATGGCCGATTGCCTCTCCTTCGTCTCCAACGGCAGCACCCTCGCCAAGCCGGACGGATCCTGCTGCAGCGGCATCAAGACCGTTCTGAAGACCAACGCCGACTGCCTCTGCCAGGCCTTCGACAACAGCGCTCAGTTCGGCATCGTCCTCGACGTCCCCAAGGCCATCACTCTCCCGGCGGTCTGCAAGGTCGACGCATCCGCCGCTAAGTGCAAATGTAAGCCTAATTTCTCTGAACTCGATCTCGTCCAACCAAACCCTAACTGATCTCTGAAATCGCTGTTTCCTGTTTTGCTATTGCAGTTTTGAACTCTCCTTCAGGATCTCCTGGTACTGTAACTCCTCCTCTCGATTCGTGTTTTGATTTTCGATCTGGATTTTTGGAATTTCCTTAGCGTTTTTTTTTGTTTTCTGTTGACGCAGCGGGTTCGCCGGCTTCCTCGCCGAAATCGCCGGCGGCTGCTGAGTCGGGGAAGAGCGATGCGGCTCCGGCGCCGGGAAAATCGGCGGCGGCGGCGGCGGGCGGTTTCGTCTCGATCGGATCTGTGATCGGCGCCATTGCTGTGGCTGTGTTCTGCAATTTCTGAAGGGGGAATGCGGCGTCATTTTGATGGAGAAAGGAATTTGGGGGTAAATTTTAATAAGATGAAATGTTTATTTGTGGAAAGGAATATTTGTTGCTAAGTGTTTGATTTCGTTGTTTCTTTTATGCGTATACTTTGTGGTATGTGACTGAAAAATGATCATAATATTCATTTCATTTTACCTATCTTTAACAAAAGCAACATTTTTAAA

mRNA sequence

CTTCTACCAGCCACAATCCACATTCTCCACTTCCCCACTAAGATTTCCCATTTCCCTTTCTCTCTCCCTCACTAATGGCCGCCGCTAAATTCTCCCTTGCCCTCTTCGCCATCGCCGTCGCCGTCGCCGTCCTAGCCGCGAACCACTCCGCCGTCTCCGCCGCACACGACGCGCCGGCGCCGGCAGCCGACTGCTCCTCCCTCATCCTCCAGATGGCCGATTGCCTCTCCTTCGTCTCCAACGGCAGCACCCTCGCCAAGCCGGACGGATCCTGCTGCAGCGGCATCAAGACCGTTCTGAAGACCAACGCCGACTGCCTCTGCCAGGCCTTCGACAACAGCGCTCAGTTCGGCATCGTCCTCGACGTCCCCAAGGCCATCACTCTCCCGGCGGTCTGCAAGGTCGACGCATCCGCCGCTAAGTGCAAATTTTTGAACTCTCCTTCAGGATCTCCTGCGGGTTCGCCGGCTTCCTCGCCGAAATCGCCGGCGGCTGCTGAGTCGGGGAAGAGCGATGCGGCTCCGGCGCCGGGAAAATCGGCGGCGGCGGCGGCGGGCGGTTTCGTCTCGATCGGATCTGTGATCGGCGCCATTGCTGTGGCTGTGTTCTGCAATTTCTGAAGGGGGAATGCGGCGTCATTTTGATGGAGAAAGGAATTTGGGGGTAAATTTTAATAAGATGAAATGTTTATTTGTGGAAAGGAATATTTGTTGCTAAGTGTTTGATTTCGTTGTTTCTTTTATGCGTATACTTTGTGGTATGTGACTGAAAAATGATCATAATATTCATTTCATTTTACCTATCTTTAACAAAAGCAACATTTTTAAA

Coding sequence (CDS)

ATGGCCGCCGCTAAATTCTCCCTTGCCCTCTTCGCCATCGCCGTCGCCGTCGCCGTCCTAGCCGCGAACCACTCCGCCGTCTCCGCCGCACACGACGCGCCGGCGCCGGCAGCCGACTGCTCCTCCCTCATCCTCCAGATGGCCGATTGCCTCTCCTTCGTCTCCAACGGCAGCACCCTCGCCAAGCCGGACGGATCCTGCTGCAGCGGCATCAAGACCGTTCTGAAGACCAACGCCGACTGCCTCTGCCAGGCCTTCGACAACAGCGCTCAGTTCGGCATCGTCCTCGACGTCCCCAAGGCCATCACTCTCCCGGCGGTCTGCAAGGTCGACGCATCCGCCGCTAAGTGCAAATTTTTGAACTCTCCTTCAGGATCTCCTGCGGGTTCGCCGGCTTCCTCGCCGAAATCGCCGGCGGCTGCTGAGTCGGGGAAGAGCGATGCGGCTCCGGCGCCGGGAAAATCGGCGGCGGCGGCGGCGGGCGGTTTCGTCTCGATCGGATCTGTGATCGGCGCCATTGCTGTGGCTGTGTTCTGCAATTTCTGA

Protein sequence

MAAAKFSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTLAKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDASAAKCKFLNSPSGSPAGSPASSPKSPAAAESGKSDAAPAPGKSAAAAAGGFVSIGSVIGAIAVAVFCNF

Homology

[Close]

BLAST of Sed0010342 vs. NCBI nr
Match: KAG6571687.1 (Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 192.6 bits (488), Expect = 3.0e-45
Identity = 118/182 (64.84%), Postives = 137/182 (75.27%), Query Frame = 0


Query: 1   MAAAKFSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTL 60
           MA AK  LALF    AVAV + + SAVSAAHDAPAPA DCSSLIL MADCLSFVSN ST 
Sbjct: 1   MATAKLFLALF----AVAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTT 60

Query: 61  AKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDASAA-KCKF 120
            KP+GSCC+G+KTVLK +ADCLCQAF NSAQ G+VL+V KA++LPA CKV A AA  CK 
Sbjct: 61  TKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKL 120

Query: 121 LNSPSGSPAGSPASSPKSPAAAESGKSDAAPAPGKSAAAAAGGFVSIGSVIGAIAVAVFC 180
            NSP+GSPA +PA+SPKS AA     ++   APG   +AA G  VS+GSVIGAI VA+  
Sbjct: 121 SNSPAGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLS 178

Query: 181 NF 182
           +F
Sbjct: 181 SF 178

[Close]

BLAST of Sed0010342 vs. NCBI nr
Match: XP_022963887.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata] >KAG7011413.1 Non-specific lipid-transfer protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.8 bits (486), Expect = 5.1e-45
Identity = 117/182 (64.29%), Postives = 137/182 (75.27%), Query Frame = 0


Query: 1   MAAAKFSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTL 60
           MA AK  LALFA+    AV + + SAVSAAHDAPAPA DCSSLIL MADCLSFVSN ST 
Sbjct: 1   MATAKLFLALFAL----AVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTT 60

Query: 61  AKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDASAA-KCKF 120
            KP+GSCC+G+KTVLK +ADCLCQAF NSAQ G+VL+V KA++LPA CKV A AA  CK 
Sbjct: 61  TKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKL 120

Query: 121 LNSPSGSPAGSPASSPKSPAAAESGKSDAAPAPGKSAAAAAGGFVSIGSVIGAIAVAVFC 180
            NSP+GSPA +PA+SPKS AA     ++   APG   +AA G  VS+GSVIGAI VA+  
Sbjct: 121 SNSPAGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLS 178

Query: 181 NF 182
           +F
Sbjct: 181 SF 178

[Close]

BLAST of Sed0010342 vs. NCBI nr
Match: XP_022967631.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita maxima])

HSP 1 Score: 189.5 bits (480), Expect = 2.5e-44
Identity = 117/182 (64.29%), Postives = 136/182 (74.73%), Query Frame = 0


Query: 1   MAAAKFSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTL 60
           MA AK  LALFA+    AVL+ + SAVSAAHDAPAPA DCSSLIL MADCLSFVSN ST 
Sbjct: 1   MATAKLFLALFAL----AVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTT 60

Query: 61  AKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDASAA-KCKF 120
            KP+GSCC+G+KTVLK +ADCLCQAF NSAQ G+VL+V KA++LPA CKV A AA  CK 
Sbjct: 61  TKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKL 120

Query: 121 LNSPSGSPAGSPASSPKSPAAAESGKSDAAPAPGKSAAAAAGGFVSIGSVIGAIAVAVFC 180
            NSP+G PA +PA+SPKS AA     ++   APG   +AA G  VSIGSVIGAI V +  
Sbjct: 121 SNSPAGPPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSIGSVIGAIGVTLLR 178

Query: 181 NF 182
           +F
Sbjct: 181 SF 178

[Close]

BLAST of Sed0010342 vs. NCBI nr
Match: XP_023553599.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187.2 bits (474), Expect = 1.3e-43
Identity = 114/182 (62.64%), Postives = 136/182 (74.73%), Query Frame = 0


Query: 1   MAAAKFSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTL 60
           MA AK  LALF++    AVL+ + S VSAAHDAPAPA DCSSLIL MADCLSFVSN ST 
Sbjct: 1   MATAKLFLALFSL----AVLSLDLSTVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTT 60

Query: 61  AKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDASAA-KCKF 120
            KP+GSCC+G+KTVLK +ADCLCQAF NSAQ G+VL+V KA++LPA CKV A AA  CK 
Sbjct: 61  TKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKL 120

Query: 121 LNSPSGSPAGSPASSPKSPAAAESGKSDAAPAPGKSAAAAAGGFVSIGSVIGAIAVAVFC 180
            NSP+ SPA +PA+SPKS AA     ++   APG   +AA G  +S+GSVIGAI VA+  
Sbjct: 121 SNSPASSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMLSVGSVIGAIGVALLS 178

Query: 181 NF 182
           +F
Sbjct: 181 SF 178

[Close]

BLAST of Sed0010342 vs. NCBI nr
Match: XP_022141909.1 (non-specific lipid-transfer protein-like protein At5g64080 [Momordica charantia])

HSP 1 Score: 183.0 bits (463), Expect = 2.4e-42
Identity = 118/189 (62.43%), Postives = 139/189 (73.54%), Query Frame = 0


Query: 1   MAAAKFSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTL 60
           MAA K SLAL     A+AVLA N S V+ AHDAP PA DCSSLIL MADCLSFVSN ST 
Sbjct: 1   MAATKLSLAL----CALAVLAVNFSGVAPAHDAPPPAVDCSSLILNMADCLSFVSNDSTT 60

Query: 61  AKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDA-SAAKCKF 120
            KP+GSCC+G+KTVLK +ADCLC+AF NSAQ G+VL+V KA++LPA CKV A +AA CK 
Sbjct: 61  TKPEGSCCTGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKL 120

Query: 121 LNSPSGSPAGSPASS--PKSPAAAESG-----KSDAAPAPGKSAAAAAGGFVSIGSVIGA 180
             SP+GSPA +P SS  P + AA E G     +   APAPGKSAA+A   FVS+GS+I A
Sbjct: 121 STSPAGSPALTPKSSPGPSTAAAPEIGAPTTSEPAPAPAPGKSAASAV--FVSVGSLIAA 180

Query: 181 IAVAVFCNF 182
           I  A+FC+F
Sbjct: 181 IGAALFCSF 183

[Close]

BLAST of Sed0010342 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.8e-22
Identity = 75/174 (43.10%), Postives = 108/174 (62.07%), Query Frame = 0


Query: 6   FSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTLAKPDG 65
           F + L +++ +V+VL A+H   +    APAP+ DCS+LIL MADCLSFVS+G T+AKP+G
Sbjct: 14  FLIVLLSLS-SVSVLGASHHHAT----APAPSVDCSTLILNMADCLSFVSSGGTVAKPEG 73

Query: 66  SCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDA-SAAKCKFLNSPS 125
           +CCSG+KTVLK ++ CLC+AF +SA  G+ L++ KA TLPA CK+ A S A C    +PS
Sbjct: 74  TCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPS 133

Query: 126 GSPAGSPASSPKSPAAAESGKSDAAPAPGKSAAAAAGGFVSIGSVIGAIAVAVF 179
            +P  +P  +   P  A       AP P      ++    S  +V+ A+   +F
Sbjct: 134 TAPGLAPGVAAAGPETA----GFLAPNPSSGNDGSSLIPTSFTTVLSAVLFVLF 178

[Close]

BLAST of Sed0010342 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-21
Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 0


Query: 37  AADCSSLILQMADCLSFVSNGSTLAKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVL 96
           A DCSSLIL MADCLSFV++GST+ KP+G+CCSG+KTV++T  +CLC+AF NS   G+ L
Sbjct: 24  AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTL 83

Query: 97  DVPKAITLPAVCKVDASAAKCKFLNSPSGSPAGSPASSPKSPAAA---ESGKSDAAPAPG 156
           D+ KA +LP+VCKV A  +    L+     PA +P  SP + A A    SG + A P   
Sbjct: 84  DLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLSPTAGAGAPALSSGANAATPVSS 143

Query: 157 KSAAAAAGGFVSIGSVIGAIAVAVF 179
             ++ A+   VS   VI    ++ F
Sbjct: 144 PRSSDASLLSVSFAFVIFMALISSF 168

[Close]

BLAST of Sed0010342 vs. ExPASy Swiss-Prot
Match: Q2PE60 (Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3702 GN=LTPG23 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-15
Identity = 52/123 (42.28%), Postives = 70/123 (56.91%), Query Frame = 0


Query: 34  PAPAADCSSLILQMADCLSFVSNGSTLAKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFG 93
           P+ + DCSS+I  M DCLSF++ GST   P  +CC G+KTVL  +  CLC A ++S + G
Sbjct: 39  PSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALESSREMG 98

Query: 94  IVLDVPKAITLPAVCKVD-----------ASAAKCKFLNSPSGSP--AGSPASSPKSPAA 144
            VLD  KA+ +P +C V            AS      + SP+ SP  A SPA +P SPA 
Sbjct: 99  FVLDDTKALAMPKICNVPIDPNCDVSTPAASTPVSPPVESPTTSPSSAKSPAITPSSPAV 158

[Close]

BLAST of Sed0010342 vs. ExPASy Swiss-Prot
Match: Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10
Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 0


Query: 6   FSLALFAIAVAVAVLAANHSAVSAAHDAPAPA-----ADCSSLILQMADCLSFVSNGSTL 65
           F L L + +  V  + A + +  A     APA     +DCS++I  M DCL ++  GS  
Sbjct: 9   FVLLLLSSSSLVTPIHARNKSNPAKSPVGAPAPGPSSSDCSTVIYSMMDCLGYLGVGSNE 68

Query: 66  AKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDASAAKCKFL 125
            KP+ SCC+GI+TVL+ N  C+C    ++ + GI L+  +A+  P  CK+  +   C  +
Sbjct: 69  TKPEKSCCTGIETVLQYNPQCICAGLVSAGEMGIELNSTRALATPKACKLSIAPPHCGII 128

Query: 126 NS----PSGSP----AGSPASSP---KSP-AAAESGKSDAAPAPGKSAAAAAG 162
            S    P  SP    AG+P +SP   KSP  +A S  SD  P+    + +++G
Sbjct: 129 TSGATTPGASPVSPSAGAPTTSPSAAKSPETSATSPSSDETPSMTAPSPSSSG 181

[Close]

BLAST of Sed0010342 vs. ExPASy Swiss-Prot
Match: Q6ASY2 (Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LTPL1 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10
Identity = 66/181 (36.46%), Postives = 92/181 (50.83%), Query Frame = 0


Query: 1   MAAAKFSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTL 60
           MA A  + A+  + V      A     +A+  APAPA DC++  L++ADCL +V+ G T 
Sbjct: 1   MAVAARAAAVACLLVVGLAAVAGVDGATASSPAPAPAVDCTAEALKLADCLDYVTPGKTA 60

Query: 61  -AKPDGSCCSGIKTVLKTNA--DCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDASA-AK 120
            ++P   CC  +K  LK +A   CLC AF  S    + +++ +A+ LPA C  DASA +K
Sbjct: 61  PSRPSKLCCGEVKGALKDSAAVGCLCAAF-TSKTLPLPINITRALHLPAACGADASAFSK 120

Query: 121 CKFLNSPSGSPAGSPASSPKSPAAAESGKSDAAPAPGKSAAAAAGGFVSIGSVIGAIAVA 178
           C            +PA SP       SG   AA AP K AAAA     S  +V+  +A A
Sbjct: 121 CL-----------APAPSPSVAPGTSSGSGGAAAAPAKGAAAARSPMASTTAVL-VVAAA 168

[Close]

BLAST of Sed0010342 vs. ExPASy TrEMBL
Match: A0A6J1HGE8 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita moschata OX=3662 GN=LOC111464062 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.5e-45
Identity = 117/182 (64.29%), Postives = 137/182 (75.27%), Query Frame = 0


Query: 1   MAAAKFSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTL 60
           MA AK  LALFA+    AV + + SAVSAAHDAPAPA DCSSLIL MADCLSFVSN ST 
Sbjct: 1   MATAKLFLALFAL----AVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTT 60

Query: 61  AKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDASAA-KCKF 120
            KP+GSCC+G+KTVLK +ADCLCQAF NSAQ G+VL+V KA++LPA CKV A AA  CK 
Sbjct: 61  TKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKL 120

Query: 121 LNSPSGSPAGSPASSPKSPAAAESGKSDAAPAPGKSAAAAAGGFVSIGSVIGAIAVAVFC 180
            NSP+GSPA +PA+SPKS AA     ++   APG   +AA G  VS+GSVIGAI VA+  
Sbjct: 121 SNSPAGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLS 178

Query: 181 NF 182
           +F
Sbjct: 181 SF 178

[Close]

BLAST of Sed0010342 vs. ExPASy TrEMBL
Match: A0A6J1HSQ0 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima OX=3661 GN=LOC111467072 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.2e-44
Identity = 117/182 (64.29%), Postives = 136/182 (74.73%), Query Frame = 0


Query: 1   MAAAKFSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTL 60
           MA AK  LALFA+    AVL+ + SAVSAAHDAPAPA DCSSLIL MADCLSFVSN ST 
Sbjct: 1   MATAKLFLALFAL----AVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTT 60

Query: 61  AKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDASAA-KCKF 120
            KP+GSCC+G+KTVLK +ADCLCQAF NSAQ G+VL+V KA++LPA CKV A AA  CK 
Sbjct: 61  TKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKL 120

Query: 121 LNSPSGSPAGSPASSPKSPAAAESGKSDAAPAPGKSAAAAAGGFVSIGSVIGAIAVAVFC 180
            NSP+G PA +PA+SPKS AA     ++   APG   +AA G  VSIGSVIGAI V +  
Sbjct: 121 SNSPAGPPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSIGSVIGAIGVTLLR 178

Query: 181 NF 182
           +F
Sbjct: 181 SF 178

[Close]

BLAST of Sed0010342 vs. ExPASy TrEMBL
Match: A0A6J1CK38 (non-specific lipid-transfer protein-like protein At5g64080 OS=Momordica charantia OX=3673 GN=LOC111012165 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.1e-42
Identity = 118/189 (62.43%), Postives = 139/189 (73.54%), Query Frame = 0


Query: 1   MAAAKFSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTL 60
           MAA K SLAL     A+AVLA N S V+ AHDAP PA DCSSLIL MADCLSFVSN ST 
Sbjct: 1   MAATKLSLAL----CALAVLAVNFSGVAPAHDAPPPAVDCSSLILNMADCLSFVSNDSTT 60

Query: 61  AKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDA-SAAKCKF 120
            KP+GSCC+G+KTVLK +ADCLC+AF NSAQ G+VL+V KA++LPA CKV A +AA CK 
Sbjct: 61  TKPEGSCCTGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKL 120

Query: 121 LNSPSGSPAGSPASS--PKSPAAAESG-----KSDAAPAPGKSAAAAAGGFVSIGSVIGA 180
             SP+GSPA +P SS  P + AA E G     +   APAPGKSAA+A   FVS+GS+I A
Sbjct: 121 STSPAGSPALTPKSSPGPSTAAAPEIGAPTTSEPAPAPAPGKSAASAV--FVSVGSLIAA 180

Query: 181 IAVAVFCNF 182
           I  A+FC+F
Sbjct: 181 IGAALFCSF 183

[Close]

BLAST of Sed0010342 vs. ExPASy TrEMBL
Match: A0A0A0K5X6 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G061200 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.5e-39
Identity = 109/183 (59.56%), Postives = 131/183 (71.58%), Query Frame = 0


Query: 1   MAAAKFSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTL 60
           MA     LALF++    A LA   S +SAA+DAPAP  DCSSLIL MADCLSFVSN ST 
Sbjct: 1   MATTNPFLALFSL----AFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTT 60

Query: 61  AKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDASAA-KCKF 120
           +KP G+CCSG+KTVLK +ADCLC+AF NSAQ G+VL+V KA++LPA CKV A AA  CK 
Sbjct: 61  SKPQGTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKL 120

Query: 121 LNSPSGSPAGSPASSPKSPAAAESGKSD--AAPAPGKSAAAAAGGFVSIGSVIGAIAVAV 180
             SP+ SPA +P+ +PKS  AA    S+   APAPGKS A A GG  S+GSV+ AI VA+
Sbjct: 121 SISPASSPAVTPSGAPKSAEAASPVVSEPTGAPAPGKSGATATGGLGSVGSVMTAIGVAL 179

[Close]

BLAST of Sed0010342 vs. ExPASy TrEMBL
Match: A0A5A7SQU3 (Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002610 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.1e-37
Identity = 105/183 (57.38%), Postives = 130/183 (71.04%), Query Frame = 0


Query: 1   MAAAKFSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTL 60
           MA     LA+F++    + LA + S +SAA+DAPAPA DCSSLIL MADCLSFVSN ST 
Sbjct: 1   MATTNLFLAIFSL----SFLALHFSPLSAANDAPAPAVDCSSLILNMADCLSFVSNDSTT 60

Query: 61  AKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDASAA-KCKF 120
            KP G+CCSG+KTVLK +ADCLC+AF NSAQ G+VL+V KA++LPA CKV A AA  CK 
Sbjct: 61  TKPQGTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKL 120

Query: 121 LNSPSGSPAGSPASSPKSPAAAE--SGKSDAAPAPGKSAAAAAGGFVSIGSVIGAIAVAV 180
             SP+ SPA +P+++PKS  AA     +   APAPGKS   A G   S+GSV+ AI VA+
Sbjct: 121 SISPASSPAVTPSATPKSAEAASPVMNEPTGAPAPGKS--GATGALASVGSVMAAIGVAL 177

[Close]

BLAST of Sed0010342 vs. TAIR 10
Match: AT5G64080.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 3.7e-25
Identity = 71/149 (47.65%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 6   FSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTLAKPDG 65
           F + L +++ +V+VL A+H   +    APAP+ DCS+LIL MADCLSFVS+G T+AKP+G
Sbjct: 14  FLIVLLSLS-SVSVLGASHHHAT----APAPSVDCSTLILNMADCLSFVSSGGTVAKPEG 73

Query: 66  SCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDA-SAAKCKFLNSPS 125
           +CCSG+KTVLK ++ CLC+AF +SA  G+ L++ KA TLPA CK+ A S A C    +PS
Sbjct: 74  TCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPS 133

Query: 126 GSPAGSPASSPK-------SPAAAESGKS 147
            +P G  A+ P+       +P++   G S
Sbjct: 134 TAP-GVAAAGPETAGFLAPNPSSGNDGSS 156

[Close]

BLAST of Sed0010342 vs. TAIR 10
Match: AT2G13820.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-24
Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 37  AADCSSLILQMADCLSFVSNGSTLAKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVL 96
           A DCSSLIL MADCLSFV++GST+ KP+G+CCSG+KTV++T  +CLC+AF NS   G+ L
Sbjct: 24  AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTL 83

Query: 97  DVPKAITLPAVCKVDA-SAAKCKFLNSPSGSPAGSPASSP 136
           D+ KA +LP+VCKV A  +A+C    S SG P   PA++P
Sbjct: 84  DLSKAASLPSVCKVAAPPSARCGL--SVSGDP---PATAP 118

[Close]

BLAST of Sed0010342 vs. TAIR 10
Match: AT5G64080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-23
Identity = 75/174 (43.10%), Postives = 108/174 (62.07%), Query Frame = 0


Query: 6   FSLALFAIAVAVAVLAANHSAVSAAHDAPAPAADCSSLILQMADCLSFVSNGSTLAKPDG 65
           F + L +++ +V+VL A+H   +    APAP+ DCS+LIL MADCLSFVS+G T+AKP+G
Sbjct: 14  FLIVLLSLS-SVSVLGASHHHAT----APAPSVDCSTLILNMADCLSFVSSGGTVAKPEG 73

Query: 66  SCCSGIKTVLKTNADCLCQAFDNSAQFGIVLDVPKAITLPAVCKVDA-SAAKCKFLNSPS 125
           +CCSG+KTVLK ++ CLC+AF +SA  G+ L++ KA TLPA CK+ A S A C    +PS
Sbjct: 74  TCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPS 133

Query: 126 GSPAGSPASSPKSPAAAESGKSDAAPAPGKSAAAAAGGFVSIGSVIGAIAVAVF 179
            +P  +P  +   P  A       AP P      ++    S  +V+ A+   +F
Sbjct: 134 TAPGLAPGVAAAGPETA----GFLAPNPSSGNDGSSLIPTSFTTVLSAVLFVLF 178

[Close]

BLAST of Sed0010342 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-22
Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 0


Query: 37  AADCSSLILQMADCLSFVSNGSTLAKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFGIVL 96
           A DCSSLIL MADCLSFV++GST+ KP+G+CCSG+KTV++T  +CLC+AF NS   G+ L
Sbjct: 24  AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTL 83

Query: 97  DVPKAITLPAVCKVDASAAKCKFLNSPSGSPAGSPASSPKSPAAA---ESGKSDAAPAPG 156
           D+ KA +LP+VCKV A  +    L+     PA +P  SP + A A    SG + A P   
Sbjct: 84  DLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLSPTAGAGAPALSSGANAATPVSS 143

Query: 157 KSAAAAAGGFVSIGSVIGAIAVAVF 179
             ++ A+   VS   VI    ++ F
Sbjct: 144 PRSSDASLLSVSFAFVIFMALISSF 168

[Close]

BLAST of Sed0010342 vs. TAIR 10
Match: AT1G36150.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 52/123 (42.28%), Postives = 70/123 (56.91%), Query Frame = 0


Query: 34  PAPAADCSSLILQMADCLSFVSNGSTLAKPDGSCCSGIKTVLKTNADCLCQAFDNSAQFG 93
           P+ + DCSS+I  M DCLSF++ GST   P  +CC G+KTVL  +  CLC A ++S + G
Sbjct: 39  PSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALESSREMG 98

Query: 94  IVLDVPKAITLPAVCKVD-----------ASAAKCKFLNSPSGSP--AGSPASSPKSPAA 144
            VLD  KA+ +P +C V            AS      + SP+ SP  A SPA +P SPA 
Sbjct: 99  FVLDDTKALAMPKICNVPIDPNCDVSTPAASTPVSPPVESPTTSPSSAKSPAITPSSPAV 158

The following BLAST results are available for this feature:

BLAST of Sed0010342 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571687.1	3.0e-45	64.84	Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperm...	[more]
XP_022963887.1	5.1e-45	64.29	non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata] ...	[more]
XP_022967631.1	2.5e-44	64.29	non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita maxima]	[more]
XP_023553599.1	1.3e-43	62.64	non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita pepo subsp...	[more]
XP_022141909.1	2.4e-42	62.43	non-specific lipid-transfer protein-like protein At5g64080 [Momordica charantia]	[more]

BLAST of Sed0010342 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYI9	2.8e-22	43.10	Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3...	[more]
Q9ZQI8	3.1e-21	46.21	Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE60	2.0e-15	42.28	Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE70	1.9e-10	33.53	Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=37...	[more]
Q6ASY2	1.9e-10	36.46	Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Sed0010342 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGE8	2.5e-45	64.29	non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita moschata...	[more]
A0A6J1HSQ0	1.2e-44	64.29	non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima O...	[more]
A0A6J1CK38	1.1e-42	62.43	non-specific lipid-transfer protein-like protein At5g64080 OS=Momordica charanti...	[more]
A0A0A0K5X6	3.5e-39	59.56	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G061200 PE=3 SV...	[more]
A0A5A7SQU3	1.1e-37	57.38	Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=...	[more]

BLAST of Sed0010342 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64080.2	3.7e-25	47.65	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.2	1.8e-24	58.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G64080.1	2.0e-23	43.10	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.1	2.2e-22	46.21	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G36150.1	1.4e-16	42.28	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 62..76 score: 33.44 coord: 39..55 score: 21.9 coord: 95..112 score: 28.8
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 40..117 e-value: 3.9E-7 score: 39.7
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 26..117 e-value: 5.6E-13 score: 48.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 37..123 e-value: 1.4E-13 score: 52.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 38..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..140
None	No IPR available	PANTHER	PTHR33044:SF181	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 5..178
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 47..110 e-value: 1.14613E-12 score: 58.2071
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 5..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010342.1	Sed0010342.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0031224	intrinsic component of membrane
molecular_function	GO:0008289	lipid binding