Sed0010299 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCGGGTGCGTGCCTGGTAAATGGAATGACATGGGTGTACGACACTGTTCAAATTTAATTTCAAATAAATAAAAGAAAAAAAAAGGGGAATATAATCCCCTTGAAATGGCGCCGTTGGATAGCGACTCCCCTTTTTTGCACAACATAAAACCCCCCTTTGTTTTCTCCTATCCTTCTGTTTTTCACTCAAACACAATGGCTCAGGTTTTTGTTTCTTTCTTTCTCTCCATTTTTCTCTTTCGATTTTGGTTCTCATCCGAGGAATCTTGTTTGCAGAAGGTGGTGCTGAAGGTGATGACGATGGCCGACGACAAGACGAAGCAGAAAGCCATCGAAGCCGCCGCCGACACCTACGGTTCGTAACTTCCGATCTCTCTAATTCGATCCATTCTTCTGCGCTGTTTAGATTTGTGATGGATTGGATGAATCATGCAGGTGTTGATTCCATCGCGGCGGATCTGAAGGATCAGAAACTGACGGTCATCGGATCCATGGACGCGGTGGCGATCGTGAAGAAACTCAAGAAGGTTGGTAAAGTGGACATTATCTTTGTGGGACCTGCAAAGGAAGAGAAGAAGGACGAGAAAAAAGAGGAAAAGAAACCAGAGAAGAAAGAGGAAAAAAAGGAAGACAAGAAAGAGGACAAAAAGTAAATTTTGTAAAAACTCCAAATAAAAGTAATATGTTCAAGTGAAAAAAAAAACTACCATTTCTTTACCCACCCAACCCTTCTTTCAATTTTGATTTTCCATATATATATTTATGAGCTCTCATTTAAATAAGTTCTTTTATGAATTATTATTATGATAATAGTTTCTATTTCTCCA TGCGGGTGCGTGCCTGGTAAATGGAATGACATGGGTGTACGACACTGTTCAAATTTAATTTCAAATAAATAAAAGAAAAAAAAAGGGGAATATAATCCCCTTGAAATGGCGCCGTTGGATAGCGACTCCCCTTTTTTGCACAACATAAAACCCCCCTTTGTTTTCTCCTATCCTTCTGTTTTTCACTCAAACACAATGGCTCAGAAGGTGGTGCTGAAGGTGATGACGATGGCCGACGACAAGACGAAGCAGAAAGCCATCGAAGCCGCCGCCGACACCTACGGTGTTGATTCCATCGCGGCGGATCTGAAGGATCAGAAACTGACGGTCATCGGATCCATGGACGCGGTGGCGATCGTGAAGAAACTCAAGAAGGTTGGTAAAGTGGACATTATCTTTGTGGGACCTGCAAAGGAAGAGAAGAAGGACGAGAAAAAAGAGGAAAAGAAACCAGAGAAGAAAGAGGAAAAAAAGGAAGACAAGAAAGAGGACAAAAAGTAAATTTTGTAAAAACTCCAAATAAAAGTAATATGTTCAAGTGAAAAAAAAAACTACCATTTCTTTACCCACCCAACCCTTCTTTCAATTTTGATTTTCCATATATATATTTATGAGCTCTCATTTAAATAAGTTCTTTTATGAATTATTATTATGATAATAGTTTCTATTTCTCCA ATGGCGCCGTTGGATAGCGACTCCCCTTTTTTGCACAACATAAAACCCCCCTTTGTTTTCTCCTATCCTTCTGTTTTTCACTCAAACACAATGGCTCAGAAGGTGGTGCTGAAGGTGATGACGATGGCCGACGACAAGACGAAGCAGAAAGCCATCGAAGCCGCCGCCGACACCTACGGTGTTGATTCCATCGCGGCGGATCTGAAGGATCAGAAACTGACGGTCATCGGATCCATGGACGCGGTGGCGATCGTGAAGAAACTCAAGAAGGTTGGTAAAGTGGACATTATCTTTGTGGGACCTGCAAAGGAAGAGAAGAAGGACGAGAAAAAAGAGGAAAAGAAACCAGAGAAGAAAGAGGAAAAAAAGGAAGACAAGAAAGAGGACAAAAAGTAA MAPLDSDSPFLHNIKPPFVFSYPSVFHSNTMAQKVVLKVMTMADDKTKQKAIEAAADTYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVGKVDIIFVGPAKEEKKDEKKEEKKPEKKEEKKEDKKEDKK Homology
BLAST of Sed0010299 vs. NCBI nr
Match: XP_022159597.1 (heavy metal-associated isoprenylated plant protein 39 [Momordica charantia]) HSP 1 Score: 151.4 bits (381), Expect = 5.5e-33 Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Sed0010299 vs. NCBI nr
Match: XP_021282244.1 (heavy metal-associated isoprenylated plant protein 39 [Herrania umbratica]) HSP 1 Score: 149.4 bits (376), Expect = 2.1e-32 Identity = 93/108 (86.11%), Postives = 99/108 (91.67%), Query Frame = 0
BLAST of Sed0010299 vs. NCBI nr
Match: XP_022931768.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata] >XP_022971860.1 heavy metal-associated isoprenylated plant protein 39 [Cucurbita maxima] >XP_023554196.1 heavy metal-associated isoprenylated plant protein 39 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6571798.1 Heavy metal-associated isoprenylated plant protein 12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 149.1 bits (375), Expect = 2.7e-32 Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Sed0010299 vs. NCBI nr
Match: XP_038888324.1 (heavy metal-associated isoprenylated plant protein 39 [Benincasa hispida]) HSP 1 Score: 148.3 bits (373), Expect = 4.7e-32 Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Sed0010299 vs. NCBI nr
Match: XP_022996221.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita maxima]) HSP 1 Score: 147.5 bits (371), Expect = 8.0e-32 Identity = 92/113 (81.42%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Sed0010299 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.9e-09 Identity = 51/105 (48.57%), Postives = 74/105 (70.48%), Query Frame = 0
BLAST of Sed0010299 vs. ExPASy Swiss-Prot
Match: Q9LTE3 (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06 Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of Sed0010299 vs. ExPASy TrEMBL
Match: A0A6J1E094 (heavy metal-associated isoprenylated plant protein 39 OS=Momordica charantia OX=3673 GN=LOC111025962 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.7e-33 Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Sed0010299 vs. ExPASy TrEMBL
Match: A0A6J1A686 (heavy metal-associated isoprenylated plant protein 39 OS=Herrania umbratica OX=108875 GN=LOC110415078 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 1.0e-32 Identity = 93/108 (86.11%), Postives = 99/108 (91.67%), Query Frame = 0
BLAST of Sed0010299 vs. ExPASy TrEMBL
Match: A0A6J1I6X1 (heavy metal-associated isoprenylated plant protein 39 OS=Cucurbita maxima OX=3661 GN=LOC111470547 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32 Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Sed0010299 vs. ExPASy TrEMBL
Match: A0A6J1EZN9 (heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111438043 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32 Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of Sed0010299 vs. ExPASy TrEMBL
Match: A0A6J1K441 (heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC111491513 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 3.9e-32 Identity = 92/113 (81.42%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of Sed0010299 vs. TAIR 10
Match: AT5G23760.1 (Copper transport protein family ) HSP 1 Score: 139.0 bits (349), Expect = 2.6e-33 Identity = 85/100 (85.00%), Postives = 95/100 (95.00%), Query Frame = 0
BLAST of Sed0010299 vs. TAIR 10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 61.2 bits (147), Expect = 7.0e-10 Identity = 51/105 (48.57%), Postives = 74/105 (70.48%), Query Frame = 0
BLAST of Sed0010299 vs. TAIR 10
Match: AT1G01490.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 61.2 bits (147), Expect = 7.0e-10 Identity = 51/105 (48.57%), Postives = 74/105 (70.48%), Query Frame = 0
BLAST of Sed0010299 vs. TAIR 10
Match: AT5G52740.1 (Copper transport protein family ) HSP 1 Score: 54.3 bits (129), Expect = 8.6e-08 Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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